mRNA_P-fluviatile_contig56.12005.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig56.12005.1 vs. uniprot
Match: A0A6H5L4R6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4R6_9PHAE) HSP 1 Score: 434 bits (1117), Expect = 2.800e-148 Identity = 210/310 (67.74%), Postives = 245/310 (79.03%), Query Frame = 1
Query: 49 SALILLSTFIAVDGKQKEEALNRETTPFWIRDPHDGMCLGADGFGFCDVKSLWIMAITHPKRRTKAIVSMLAPEADRMCLGSKSGGWFSSLRPIRVSKCGSGNARNLDLSDLGVQSHSGFLLVQGKNCLARGEGELRNSAYMQLCTKGTPLEIVESPVHTAGVQIATADGYCFDGARFRVCNDGDATLRWGIGLDFRSTEPSRNLFSFFAQEKCAVREGGTARKGDCKSKGAAKWGWKDGMLTQGGSYCLGRRKDNMATMLPCSVGFEQVMFETPDIVPAKAKKQQQQNPVFGDRDKASARKRGGSRRFE 978
+ L LL +AV GK++EEALN++TTPFW+RD DGMCLG DGFG CD +LWI+A+ HPK+ T+A VSMLAPE +RMCLGS SGG FSS R + VSKCGSGNA+N+ LSDL VQ SGFLL QGKNCLARG+G LRNSA MQL + GT LE+VE+P+H AG+QIAT D YCFDGARFR CNDGD TLRWGIG+DFRSTEPSRNLF FF +EKCAVREG TARKGDCK+KGAA+WGW+DG LTQGG +CLGR DN A M+PCS G E V F TP+IVP Q +FG+++KAS R+ RRFE
Sbjct: 3 AVLTLLCMAVAVVGKKQEEALNKDTTPFWLRDQLDGMCLGPDGFGACDASNLWILALKHPKKLTQAFVSMLAPEPERMCLGSSSGGMFSSRRRVGVSKCGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQL-SSGTALEVVETPIHVAGMQIATVDDYCFDGARFRTCNDGDPTLRWGIGMDFRSTEPSRNLFYFFDREKCAVREGQTARKGDCKNKGAARWGWRDGKLTQGGKHCLGRGSDNKAIMVPCSEGHEHVNFVTPEIVPVGM-----QQSMFGEQEKASTRRGATPRRFE 306
BLAST of mRNA_P-fluviatile_contig56.12005.1 vs. uniprot
Match: D8LIW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIW7_ECTSI) HSP 1 Score: 214 bits (545), Expect = 1.750e-64 Identity = 102/148 (68.92%), Postives = 117/148 (79.05%), Query Frame = 1
Query: 535 VQIATADGYCFDGARFRVCNDGDATLRWGIGLDFRSTEPSRNLFSFFAQEKCAVREGGTARKGDCKSKGAAKWGWKDGMLTQGGSYCLGRRKDNMATMLPCSVGFEQVMFETPDIVPAKAKKQQQQNPVFGDRDKASARKRGGSRRFE 978
+QIATAD YCFDGARFR CNDGD TLRWGIG+DFRSTEPSRNLF FF +EKCAVREG TARKGDCK+KGAA+WGW+DG LTQGG +CLGR +DN A M+PCS G E V F TP+IVP Q +FG+++KAS R+ RRFE
Sbjct: 1 MQIATADDYCFDGARFRTCNDGDPTLRWGIGIDFRSTEPSRNLFYFFDREKCAVREGETARKGDCKNKGAARWGWRDGKLTQGGKHCLGRGRDNKAIMVPCSEGHEHVNFITPEIVPVGT-----QQSMFGEQEKASTRRGATPRRFE 143
BLAST of mRNA_P-fluviatile_contig56.12005.1 vs. uniprot
Match: A0A6H5K6Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y7_9PHAE) HSP 1 Score: 110 bits (275), Expect = 5.000e-24 Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 1
Query: 1243 DNLRGGVLIVVHAVVVRPLTSHPYKAGTDHAGLSPDQALTPPSAKRREVFGESHEGCAASC 1425
+ + GGVLIVVHAVVVRPLTSHPY+AGT+HAG S DQALT PSAKRRE+FGESHEGCAASC
Sbjct: 180 EGVGGGVLIVVHAVVVRPLTSHPYEAGTEHAGFSADQALTSPSAKRREIFGESHEGCAASC 240
BLAST of mRNA_P-fluviatile_contig56.12005.1 vs. uniprot
Match: D8LIW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIW8_ECTSI) HSP 1 Score: 102 bits (255), Expect = 3.360e-23 Identity = 50/66 (75.76%), Postives = 54/66 (81.82%), Query Frame = 1
Query: 280 MCLGSKSGGWFSSLRPIRVSKCGSGNARNLDLSDLGVQSHSGFLLVQGKNCLARGEGELRNSAYMQ 477
MCLGS SGG FSS R + VSKCGSGNA+N+ LSDL VQ SGFLL QGKNCLARG+G LRNSA MQ
Sbjct: 1 MCLGSSSGGMFSSRRRVGVSKCGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQ 66
BLAST of mRNA_P-fluviatile_contig56.12005.1 vs. uniprot
Match: A0A6H5KAH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAH1_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 2.050e-13 Identity = 37/44 (84.09%), Postives = 37/44 (84.09%), Query Frame = 1
Query: 1321 GTDHAGLSPDQALTPPSAKRREVFGESHEGCAASC*GYSASCAY 1452
G HAG SPDQALT SAKRREVFGESHEGCAASC YSASCAY
Sbjct: 102 GGGHAGFSPDQALTSASAKRREVFGESHEGCAASCQAYSASCAY 145
BLAST of mRNA_P-fluviatile_contig56.12005.1 vs. uniprot
Match: A0A6H5J7U0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7U0_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 2.370e-11 Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 1
Query: 1255 GGVLIVVHAVVVRPLTSHPYKAGTDHAGLSPDQALTPPSAKRRE 1386
GGVLIVVHAVV+RPLTSHP KAGT+HAG S DQALT PSAKRRE
Sbjct: 383 GGVLIVVHAVVMRPLTSHPCKAGTEHAGFSLDQALTSPSAKRRE 426
BLAST of mRNA_P-fluviatile_contig56.12005.1 vs. uniprot
Match: A0A6H5K5P3_9PHAE (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5P3_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 1.120e-8 Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 1
Query: 1324 TDHAGLSPDQALTPPSAKRREVFGESHEGCAASC 1425
T+HAG SPDQALT PSAKRRE+FGESHEGCAASC
Sbjct: 665 TEHAGFSPDQALTSPSAKRREIFGESHEGCAASC 698
BLAST of mRNA_P-fluviatile_contig56.12005.1 vs. uniprot
Match: A0A6H5JKA8_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA8_9PHAE) HSP 1 Score: 62.0 bits (149), Expect = 2.030e-6 Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = -1
Query: 1332 DAAHPSCDSPNTSRRFALGGVRAWSGDNPA 1421
DAAHPSCDSPN SRRFALG VRAWSG+NPA
Sbjct: 508 DAAHPSCDSPNISRRFALGDVRAWSGENPA 537
BLAST of mRNA_P-fluviatile_contig56.12005.1 vs. uniprot
Match: A0A6H5JUK7_9PHAE (RGS domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK7_9PHAE) HSP 1 Score: 59.7 bits (143), Expect = 8.900e-6 Identity = 27/39 (69.23%), Postives = 30/39 (76.92%), Query Frame = -1
Query: 1308 QDAAHPSCDSPNTSRRFALGGVRAWSGDNPAWSVPAL*G 1424
+DAAHPSCDSPNTSRRFA+G VRAWSG+ P L G
Sbjct: 341 EDAAHPSCDSPNTSRRFAIGDVRAWSGEKSGVLRPGLVG 379
BLAST of mRNA_P-fluviatile_contig56.12005.1 vs. uniprot
Match: A0A6H5KPG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPG4_9PHAE) HSP 1 Score: 50.4 bits (119), Expect = 8.180e-5 Identity = 24/29 (82.76%), Postives = 25/29 (86.21%), Query Frame = -2
Query: 1373 QGSKHKMPNTLSRMQRTLHATRRIPHGAS 1459
QG+KH MPNTLSRMQ TLHATR I HGAS
Sbjct: 23 QGTKHNMPNTLSRMQHTLHATRPISHGAS 51 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig56.12005.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig56.12005.1 >prot_P-fluviatile_contig56.12005.1 ID=prot_P-fluviatile_contig56.12005.1|Name=mRNA_P-fluviatile_contig56.12005.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=316bp MKAASALILLSTFIAVDGKQKEEALNRETTPFWIRDPHDGMCLGADGFGFback to top mRNA from alignment at P-fluviatile_contig56:461600..468374+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig56.12005.1 ID=mRNA_P-fluviatile_contig56.12005.1|Name=mRNA_P-fluviatile_contig56.12005.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6775bp|location=Sequence derived from alignment at P-fluviatile_contig56:461600..468374+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig56:461600..468374+ >mRNA_P-fluviatile_contig56.12005.1 ID=mRNA_P-fluviatile_contig56.12005.1|Name=mRNA_P-fluviatile_contig56.12005.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1896bp|location=Sequence derived from alignment at P-fluviatile_contig56:461600..468374+ (Porterinema fluviatile SAG_2381)back to top |