mRNA_P-fluviatile_contig54.11862.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig54.11862.1 vs. uniprot
Match: D7G4Z5_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4Z5_ECTSI) HSP 1 Score: 182 bits (462), Expect = 2.890e-58 Identity = 85/92 (92.39%), Postives = 91/92 (98.91%), Query Frame = 1
Query: 1 MENSGVSAKMVSDMDDHGEMRVDAQNWAAAAIESKNDEKDISRAIKSKFEAKYGPTWHCIVGTDFKAYVTHESKHFIFFYHGKVAFCLYKAG 276
ME+SGVSAKMVSDMDDHGEMRVDAQNWAAAAIESK+DEK+ISRAIKSKFE KYGPTWHCIVGTDFKA+VTHESKHF+FFYHGK+AFCLYKAG
Sbjct: 1 MESSGVSAKMVSDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 92
BLAST of mRNA_P-fluviatile_contig54.11862.1 vs. uniprot
Match: A0A835YST4_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YST4_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.550e-44 Identity = 69/92 (75.00%), Postives = 78/92 (84.78%), Query Frame = 1
Query: 1 MENSGVSAKMVSDMDDHGEMRVDAQNWAAAAIESKNDEKDISRAIKSKFEAKYGPTWHCIVGTDFKAYVTHESKHFIFFYHGKVAFCLYKAG 276
MENSG S+ +VSDMDDH EMR DAQ WAAAAIES +EK IS+ IK + + KYGPTWHCIVGTDFKAYVTHE+K F+FFYHGK+A CLYKAG
Sbjct: 1 MENSGASSSVVSDMDDHSEMRTDAQAWAAAAIESHAEEKAISKDIKGRMDDKYGPTWHCIVGTDFKAYVTHETKTFMFFYHGKMAICLYKAG 92
BLAST of mRNA_P-fluviatile_contig54.11862.1 vs. uniprot
Match: A0A7S2V5R3_9STRA (Dynein light chain (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5R3_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.330e-39 Identity = 65/93 (69.89%), Postives = 77/93 (82.80%), Query Frame = 1
Query: 1 MENSGVS-AKMVSDMDDHGEMRVDAQNWAAAAIESKNDEKDISRAIKSKFEAKYGPTWHCIVGTDFKAYVTHESKHFIFFYHGKVAFCLYKAG 276
ME+ G K+V DMD+HGEM+ DA+N AAAA+E +EKDISR IK+ F+ KYGPTWHCIVGTDF+A+VTHESKHFIFFY GK+A CLYKAG
Sbjct: 39 MESRGSGEGKLVCDMDEHGEMKNDAKNVAAAAVEQHQEEKDISRHIKAHFDQKYGPTWHCIVGTDFRAFVTHESKHFIFFYIGKIAICLYKAG 131
BLAST of mRNA_P-fluviatile_contig54.11862.1 vs. uniprot
Match: A0A7S2CIH5_9STRA (Dynein light chain n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CIH5_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.890e-36 Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = 1
Query: 7 NSGVSAKMVSDMDDHGEMRVDAQNWAAAAIESKNDEKDISRAIKSKFEAKYGPTWHCIVGTDFKAYVTHESKHFIFFYHGKVAFCLYKAG 276
N+ S+K+V DMD+HGEM+ DA A AIE +EK IS +IKS F+AKYGPTWHCIVG+DF+A+VTHESKHFIFFY GK A CLYKAG
Sbjct: 27 NTYGSSKIVCDMDEHGEMKADAHTVAGEAIEKFTEEKAISTSIKSFFDAKYGPTWHCIVGSDFRAFVTHESKHFIFFYIGKTAICLYKAG 116
BLAST of mRNA_P-fluviatile_contig54.11862.1 vs. uniprot
Match: A0A7S0SUZ6_9STRA (Dynein light chain n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUZ6_9STRA) HSP 1 Score: 121 bits (304), Expect = 4.700e-34 Identity = 59/92 (64.13%), Postives = 73/92 (79.35%), Query Frame = 1
Query: 7 NSGVSAKMVSDMDDHG---EMRVDAQNWAAAAIESKNDEKDISRAIKSKFEAKYGPTWHCIVGTDFKAYVTHESKHFIFFYHGKVAFCLYKA 273
+SG +KMV DM+DHG EM+ DA + A+ A+E+ +EKDISR IKS F+ KYGPTWHCIVG+DF+A+VT+ESKHFIFFY GK A CLYK
Sbjct: 10 SSGPHSKMVCDMEDHGIHGEMKNDALSVASTALEANQEEKDISRHIKSFFDQKYGPTWHCIVGSDFRAFVTYESKHFIFFYIGKTAICLYKT 101
BLAST of mRNA_P-fluviatile_contig54.11862.1 vs. uniprot
Match: F0XW00_AURAN (Dynein light chain (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW00_AURAN) HSP 1 Score: 110 bits (276), Expect = 4.460e-30 Identity = 50/78 (64.10%), Postives = 61/78 (78.21%), Query Frame = 1
Query: 43 DDHGEMRVDAQNWAAAAIESKNDEKDISRAIKSKFEAKYGPTWHCIVGTDFKAYVTHESKHFIFFYHGKVAFCLYKAG 276
D+HGEM+ + N AA AIE E ++S+ IK+ F+ KYGPTWHCIVG+DF+AYVTHESK+FIFFY GK A CLYK G
Sbjct: 1 DEHGEMKQEVYNLAAYAIEQYVTEMEVSKHIKAHFDQKYGPTWHCIVGSDFRAYVTHESKNFIFFYQGKTAICLYKCG 78
BLAST of mRNA_P-fluviatile_contig54.11862.1 vs. uniprot
Match: A0A482SJR4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJR4_9ARCH) HSP 1 Score: 107 bits (266), Expect = 1.260e-28 Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 58 MRVDAQNWAAAAIESKNDEKDISRAIKSKFEAKYGPTWHCIVGTDFKAYVTHESKHFIFFYHGKVAFCLYKA 273
M+ DA AAA+E+ +EKDIS+ +K+ F+ KYGPTWHCIVG+DF+A+VTHESKHFIFFY GK A CLYKA
Sbjct: 1 MKHDAFTVVAAALETNTEEKDISKHVKTYFDQKYGPTWHCIVGSDFRAFVTHESKHFIFFYIGKTAICLYKA 72
BLAST of mRNA_P-fluviatile_contig54.11862.1 vs. uniprot
Match: A0A7S1YV50_9STRA (Dynein light chain n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YV50_9STRA) HSP 1 Score: 107 bits (266), Expect = 4.820e-28 Identity = 52/84 (61.90%), Postives = 61/84 (72.62%), Query Frame = 1
Query: 25 KMVSDMDDHGEMRVDAQNWAAAAIESKNDEKDISRAIKSKFEAKYGPTWHCIVGTDFKAYVTHESKHFIFFYHGKVAFCLYKAG 276
K + DMD+H EM+ DA + A AIES EKD + IK F+AKYGPTWH IVG+DFKAY THE+K F FFY GK A C+YKAG
Sbjct: 36 KQICDMDEHSEMKSDAISVATNAIESHIQEKDQANHIKRAFDAKYGPTWHVIVGSDFKAYGTHEAKTFFFFYVGKAAICMYKAG 119
BLAST of mRNA_P-fluviatile_contig54.11862.1 vs. uniprot
Match: A0A8J2SHI5_9STRA ([Phosphatase 2A protein]-leucine-carboxy methyltransferase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHI5_9STRA) HSP 1 Score: 108 bits (270), Expect = 3.220e-26 Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = 1
Query: 10 SGVSAKMVS--DMDDHGEMRVDAQNWAAAAIESKNDEKDISRAIKSKFEAKYGPTWHCIVGTDFKAYVTHESKHFIFFYHGKVAFCLYKAG 276
SG +V +D+HGEM+ +A N AA A+E E +IS+ IK++F+ KYGPTWHCIVG+DFK THE+KHFIFFYHGK A LYK G
Sbjct: 288 SGACVPLVGACSVDEHGEMKQEAYNLAAYAVEQFVTEMEISKHIKAQFDEKYGPTWHCIVGSDFKLQCTHEAKHFIFFYHGKTAVALYKCG 378
BLAST of mRNA_P-fluviatile_contig54.11862.1 vs. uniprot
Match: A0A0R3UCN8_MESCO (Dynein light chain n=1 Tax=Mesocestoides corti TaxID=53468 RepID=A0A0R3UCN8_MESCO) HSP 1 Score: 100 bits (250), Expect = 8.030e-26 Identity = 52/91 (57.14%), Postives = 69/91 (75.82%), Query Frame = 1
Query: 13 GVSAKMV---SDMDDHGEMRVDAQNWAAAAIESKNDEKDISRAIKSKFEAKYGPTWHCIVGTDFKAYVTHESKHFIFFYHGKVAFCLYKAG 276
G S K V +DM D EM+ DA + A+ A++++ EKDI+ AIK KF++KYGPTWHCIVG +F +YVTHESKHFI+FY G+VA L+K+G
Sbjct: 14 GQSQKAVVKNADMSD--EMQHDAVDCASEAMQNQTIEKDIAAAIKKKFDSKYGPTWHCIVGRNFGSYVTHESKHFIYFYMGQVAILLFKSG 102 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig54.11862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig54.11862.1 >prot_P-fluviatile_contig54.11862.1 ID=prot_P-fluviatile_contig54.11862.1|Name=mRNA_P-fluviatile_contig54.11862.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=93bp MENSGVSAKMVSDMDDHGEMRVDAQNWAAAAIESKNDEKDISRAIKSKFEback to top mRNA from alignment at P-fluviatile_contig54:1114662..1118129- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig54.11862.1 ID=mRNA_P-fluviatile_contig54.11862.1|Name=mRNA_P-fluviatile_contig54.11862.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3468bp|location=Sequence derived from alignment at P-fluviatile_contig54:1114662..1118129- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig54:1114662..1118129- >mRNA_P-fluviatile_contig54.11862.1 ID=mRNA_P-fluviatile_contig54.11862.1|Name=mRNA_P-fluviatile_contig54.11862.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=558bp|location=Sequence derived from alignment at P-fluviatile_contig54:1114662..1118129- (Porterinema fluviatile SAG_2381)back to top |