mRNA_P-fluviatile_contig23.5253.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig23.5253.1 vs. uniprot
Match: D7G8N1_ECTSI (Eukaryotic translation initiation factor 3 subunit E n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8N1_ECTSI) HSP 1 Score: 872 bits (2254), Expect = 2.990e-309 Identity = 429/479 (89.56%), Postives = 456/479 (95.20%), Query Frame = 2
Query: 218 AVEAASTTSKYDLTRTISKYLDLHLMFPLLDFLDITNIYPADQVAQARLDLLDATNMSDYAIEIYKNLNNTDEDPPDMVERRAEVFARMSTLKEEAGVLTAIFADKATVEEAPMTQTDSSAFTPQQQVVENLIKEQNFTWKGIKAGLELDDSALESYYANAKYKSDCGDYVTAAAALKNYCEITQTPGVPGSGPNGMSALWGRLVCEILVANWDGALTVLRELKACIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGRKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCNCAGEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMEIEAAEKWIVDLIRGSKLDAKIDSRNNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLAADTAAGVTPDPANYSGRGGGDWG 1654
AV A+ TTS+YDLTRTISKYLDLH+MFPLLDF++++NIYPADQVAQARLDLLD TNMSDYA+EIYK+LN+TDEDPPDMVERRAEVFARMSTLK+EAG+LT +FADKA VEEA +TQ D ++FT QQ VE LIKEQNFTWKGIK L L+DSALESYYANAK++SDCGDYV AAAALK+YC+ITQTPGVPGSGPNGMSALWGRL CEILVANWDGALT+LRELK+CIEFTNAPPL+QLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGG KYVMRDLMRVLE EKHAYTDPVTEFLEGLQVSFDFDGAQARL ECERVLLSDFFLCNCA EFMEAARHFIFETYCRIHHKIDIGMLA+KMGME+EAAEKWIVDLIRGSKLDAKIDSR+NNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLA DTA GVTPDPANYSGRGGGDWG
Sbjct: 7 AVPASRTTSQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDGTNMSDYAMEIYKSLNSTDEDPPDMVERRAEVFARMSTLKDEAGILTEVFADKAVVEEAAVTQVDPASFTQQQLSVEKLIKEQNFTWKGIKGELGLEDSALESYYANAKFQSDCGDYVAAAAALKSYCDITQTPGVPGSGPNGMSALWGRLACEILVANWDGALTLLRELKSCIEFTNAPPLQQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGGKYVMRDLMRVLEHEKHAYTDPVTEFLEGLQVSFDFDGAQARLVECERVLLSDFFLCNCADEFMEAARHFIFETYCRIHHKIDIGMLADKMGMEMEAAEKWIVDLIRGSKLDAKIDSRDNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLATDTANGVTPDPANYSGRGGGDWG 485
BLAST of mRNA_P-fluviatile_contig23.5253.1 vs. uniprot
Match: A0A836CBR3_9STRA (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBR3_9STRA) HSP 1 Score: 520 bits (1339), Expect = 4.830e-172 Identity = 279/491 (56.82%), Postives = 346/491 (70.47%), Query Frame = 2
Query: 206 IMSGAVEAA---STTSKYDLTRTISKYLDLHLMFPLLDFLDITNIYPADQVAQARLDLLDATNMSDYAIEIYKNLNNTDEDPPDMVERRAEVFARMSTLKEEAGVLTAIFADKATVEEAPMTQTDSSAFTPQQQVVENLIKEQNFTWKGIKAGLELDDSALESYYANAKYKSDCGDYVTAAAALKNYCEITQTPGVPGSGPNGMSALWGRLVCEILVANWDGALTVLRELKACIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKA----GAGGRKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCNCAGEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMEIEAAEKWIVDLIRGSKLDAKIDSRNNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLAADTAAGVTPDPANYSGRGGGDWGG 1657
+ +GA A ST + +DLTRTIS+YLDLHLMFPLLDF+++ N+Y + V+QARLDLL+ TNM DYA+E+Y+NL+N P +MV RR +VFAR+ LKE A L AI D V L EQ F W G+++ L DS L+SY AK+ DCGDY A AALK + ++ G GS G SALWGRL CEIL N +GAL ++R++KA IE+ +EQLQQRSWLLHWSLFVFFNHANGRDEL+ LFFEE F+QAIQTNCPWLLRYLVTA++LT++ + + MRDL+RVLEQE+ +Y+DP+T+FLE L V+FDFDGA R ECE+VL DFFLC+ EFMEAAR F FETYCRIH KID+ +LA KM M+ +AAEKWI DLIR S+LDAKIDSR+N+V+MG +FPSVYQQ++ KT DL++RSY L+N LKQ A D A G+T DP NY + GG GG
Sbjct: 2 VDAGAASAGGDGSTGADHDLTRTISEYLDLHLMFPLLDFVEMNNMYDSAGVSQARLDLLEPTNMVDYAMEVYQNLHNGAAAPKEMVVRRDKVFARLEELKEAASRLIAIVEDPV--------------------AVGRLENEQRFDWNGLQSEFGLPDSMLQSYADLAKFNYDCGDYKGAGAALKVFLALSG--GAAGS-QRGPSALWGRLACEILSNNSEGALALIRDVKAMIEYRGGSAIEQLQQRSWLLHWSLFVFFNHANGRDELIALFFEEKFLQAIQTNCPWLLRYLVTAVVLTRSTGSTSSNKQAQTMRDLIRVLEQEQGSYSDPITQFLESLYVNFDFDGALLRRRECEQVLRRDFFLCSVCDEFMEAARLFTFETYCRIHRKIDVALLAAKMDMDADAAEKWIADLIRTSQLDAKIDSRDNSVVMGASFPSVYQQVIEKTDDLSLRSYVLINNLKQYAQDHANGLTDDP-NYGQQRGGYGGG 468
BLAST of mRNA_P-fluviatile_contig23.5253.1 vs. uniprot
Match: A0A7S2SQG8_9STRA (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQG8_9STRA) HSP 1 Score: 399 bits (1026), Expect = 4.070e-126 Identity = 217/457 (47.48%), Postives = 297/457 (64.99%), Query Frame = 2
Query: 218 AVEAASTTSKYDLTRTISKYLDLHLMFPLLDFLDITNI--YPADQVAQARLDLLDATNMSDYAIEIYKNLN-NTDEDPPDMVERRAEVFARMSTLKEEAGVLTAIFADKATVEEAPMTQTDSSAFTPQQQVVENLIKEQNFTWKGIKAGLELDDSALESYYANAKYKSDCGDYVTAAAALKNYCEITQTPGVPGSGPNGMSALWGRLVCEILVANWDGALTVLRELKACIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGRKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCNCAGEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMEIEAAEKWIVDLIRGSKLDAKIDSRNNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQ 1579
A E AS+ ++YDLT IS+YLDLHLMFPLL+F++ Y + +ARL L TNM DYAIEI+ +LN EDP DMV +R EV+ ++ +K E L+ F + + A + Q+ + + I+ + +D + +E+YY K++ +CG Y A L ++ I + S G +ALWG+ IL WD AL ++ LK I+ P QLQQR+WLLHWSLFVFFNH GRD ++ F + ++QAIQ N PWLLRYL +A+I+ + R+ ++ L+RV+EQE+H+Y+DP+T+FLE L+V FDF+GAQ +L EC VLL D+FLCNC EF+++AR FIFETYCRIH KIDI MLAEK+ ME E AE+WIV+LIRG++LDAKIDS++N VIMG +FPSVYQQI+ KTKDLTVRS+ L +++
Sbjct: 7 ASEPASS-ARYDLTPVISEYLDLHLMFPLLEFVESNEHLNYDKSDIQRARLAYLKPTNMVDYAIEIFHDLNPEVKEDPADMVRQRDEVYEKLGRIKTEHTKLSTFFQEMREGKYAG-----------------GFGEGQSLSLRWIQENIGVDQAGVENYYRYGKFQYECGLYEDACTVLSDFLSIDEYKIT--SSDLGFAALWGKFAALILQKQWDAALAEMQTLKKAIDERTTPDKLQLQQRTWLLHWSLFVFFNHHQGRDLIIEAFLSDRYLQAIQINAPWLLRYLTSAVIINQR----RRGELKALVRVIEQEQHSYSDPITKFLECLRVDFDFEGAQQKLVECTNVLLGDYFLCNCTDEFVQSARLFIFETYCRIHRKIDISMLAEKLVMEPEDAEQWIVNLIRGAQLDAKIDSKDNCVIMGSSFPSVYQQIVDKTKDLTVRSFQLATNVER 439
BLAST of mRNA_P-fluviatile_contig23.5253.1 vs. uniprot
Match: A0A7S2GAP6_9STRA (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GAP6_9STRA) HSP 1 Score: 400 bits (1027), Expect = 9.360e-126 Identity = 220/474 (46.41%), Postives = 304/474 (64.14%), Query Frame = 2
Query: 245 KYDLTRTISKYLDLHLMFPLLDFLDITNI--YPADQVAQARLDLLDATNMSDYAIE------IYKNLNNTDEDPPDM----VERRAEVFARMSTLKEEAGVLTAIFADKATVEEAPMTQTDSSAFTPQQQVVENLIKEQNFTWKGIKAGLELDDSALESYYANAKYKSDCGDYVTAAAALKNYCEITQTPGVPGSGPNGMSALWGRLVCEILVANWDGALTVLRELKACIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGRKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCNCAGEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMEIEAAEKWIVDLIRGSKLDAKIDSRNNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLAADTAAGVTPDPANYS 1630
++DLT TIS YLDLHL+FPLLDF++ Y + +ARL LL TNM+DY IE ++N + +E+ P + + + E+ ++M T ++A+ A +E+ D F + V +L++ + ++ L +D AL++YY AK++ DCG+Y A L +Y + +T + G +A WG+ IL+ NWD AL + LK IE N E+LQQR+WLLHWSLF+FFNH G+D L+ FF E ++QAIQTN PWLLRYL TA+I+ R+ +++L++V++QE++ Y DP+T+FLE L V FDF+GAQ +L EC+ VL SD+FLCNCA FME AR FIFETYCRIHHKIDIGMLA+K+ M E AE+WIVDLIRG+ LDAKIDS+ N VIMG FPSVYQQ++ KTKDLT+RSY L +++ + DT TP+P + S
Sbjct: 34 RFDLTPTISAYLDLHLLFPLLDFVENNEQLKYDGADITRARLALLKPTNMADYTIEQAVRVWCFENGADPNENDPSIKLLPADEQTELQSQMDT----------VYANIAELEKNNKKLYD---FFQDKDAVRSLVESGQLNLEYLEKNLSVDKEALDAYYHYAKFQYDCGNYSCAYEKLSDYLSVAETK----TTELGYNAQWGKFAAAILMTNWDQALIEMNILKKAIEERNVSDKEKLQQRTWLLHWSLFLFFNHPKGKDMLIDTFFSERYLQAIQTNTPWLLRYLTTAVIINNR----RRNELKNLLQVIQQEQYTYNDPITKFLECLYVHFDFEGAQQKLHECKLVLQSDYFLCNCADVFMENARLFIFETYCRIHHKIDIGMLAQKLAMGPEEAERWIVDLIRGAYLDAKIDSKENYVIMGSNFPSVYQQVIDKTKDLTIRSYQLAENIER-SMDTP---TPEPRHTS 482
BLAST of mRNA_P-fluviatile_contig23.5253.1 vs. uniprot
Match: A0A388K4K2_CHABU (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K4K2_CHABU) HSP 1 Score: 386 bits (992), Expect = 2.030e-119 Identity = 206/465 (44.30%), Postives = 295/465 (63.44%), Query Frame = 2
Query: 215 GAVEAAS--TTSKYDLTRTISKYLDLHLMFPLLDFLDITNIYPADQVAQARLDLLDATNMSDYAIEIYKNLNNTDEDPPDMVERRAEVFARMSTLKEEAGVLTAIFADKATVEEAPMTQTDSSAFTPQQQVVENLIKEQNFTWKGIKAGLELDDSALESYYANAKYKSDCGDYVTAAAALKNYCEITQTPGVPGSGPNGMSALWGRLVCEILVANWDGALTVLRELKACIEFTN-APPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGRKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCNCAGEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMEIEAAEKWIVDLIRGSKLDAKIDSRNNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLAADTAA 1600
GAV S SKYDLT ++ +LD HL+FPLL+FL I+P D + +A++DLL TNM DYA++I+K L NT++ P +MVERR EV + L+E A AP+ +F +V+ L E+ + + ++ ++ +E Y AK++ DCG+Y AA L Y + + G+SALWG+ EIL+ NWD A+ + LK I+ + + PL QLQQR+WL+HWSLFVFFNH NGR+ ++ LFF+E +M AIQTN LLRYL TA+I+ K R+ +++DL++V++QE + Y DP+TEFLE L V++DF+GAQ +L ECE V+ +D+F+ + EF+E AR FIFETYCRIH IDI ML+ ++ M + AE+WI++LIR +KLDAKID++ V+MG PSVY+QI+ +TK L++RSY L N + A A
Sbjct: 133 GAVVVISQPAMSKYDLTPKVAPFLDRHLVFPLLEFLQKEKIFPVDDIMKAKIDLLGKTNMVDYAMDIHKGLYNTEDVPQEMVERRVEVIGNLKALEEAA---------------APLI-----SFLQNPSMVQELRSEKQYNLQMLQERYQIGPEQIEGLYQYAKFQFDCGNYSAAADYLYQYRALCT------NNDRGVSALWGKFAAEILMLNWDAAMEEMNRLKEVIDSKSFSSPLLQLQQRTWLMHWSLFVFFNHENGRNGIIELFFQERYMNAIQTNAQHLLRYLATAVIVNKR----RRNMLKDLIKVIQQEHYTYADPITEFLECLYVNYDFEGAQKKLRECEEVIATDYFISPFSDEFIENARLFIFETYCRIHQCIDIRMLSVRLNMNDDDAERWILNLIRNAKLDAKIDAKAGTVVMGTQHPSVYEQIIERTKGLSMRSYMLANAVASTAVPPQA 567
BLAST of mRNA_P-fluviatile_contig23.5253.1 vs. uniprot
Match: F0XWU6_AURAN (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWU6_AURAN) HSP 1 Score: 381 bits (979), Expect = 2.780e-119 Identity = 213/447 (47.65%), Postives = 282/447 (63.09%), Query Frame = 2
Query: 242 SKYDLTRTISKYLDLHLMFPLLDFLDITNIYPADQVAQARLDLLDATNMSDYAIEIYKNLNNTDEDPPDMVERRAEVFARMSTLKEEAGVLTAIFA--DKATVEEAPMTQTDSSAFTPQQQVVENLIKEQNFTWKGIKAGLELDDSALESYYANAKYKSDCGDYVTAAAALKNYCEITQTPGVPGSGPNGMSALWGRLVCEILVANWDGALTVLRELKACIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGRKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCNCAGEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMEIEAAEKWIVDLIRGSKLDAKIDSRNNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLK 1576
S+Y++T+ IS +LD HL+FPLLDFL+ Y A V +ARLDLL TNM DYAIEI L + + + L E A + A+ A D A V+ D+ A VE + ++ +T ++A + + Y+ AK+ +CGDY A L +Y + P +G ALWG+ E+L+ NW+GAL L L+A I+ APPLEQLQQRSWLLHWSLFVFFNHA G D ++ LF E ++QAIQTNCPWLLRYL TA+I+ K R+ ++DL+RV+ E DPVT+FLE L V FDF+GAQ L EC++ L SD+FLCNCA FME AR F+FETYCRIH KIDIGML++K+ ME E AE+W+VDLIRG+ LDAKIDS+++ V+MG SVY Q++ KT+DL+ RS L++ L+
Sbjct: 17 SEYEVTQKISPFLDAHLVFPLLDFLEENTSYEAGSVQRARLDLLAPTNMVDYAIEIRSALGDAN-----------------AALVEGAPSVEAMEARRDAAKVQRVAEVLEDAEA-------VEQMKRDGTYTAADLEAKHGIGPANWADYFEFAKFLYECGDYEGARDMLDHYLALC-FPAGKKLDASGFRALWGKFGSEVLLKNWEGALHDLGRLRAAIDDFGAPPLEQLQQRSWLLHWSLFVFFNHAKGHDGIIDLFLNEKYLQAIQTNCPWLLRYLTTAVIINKR----RRSTLKDLVRVITMEHDLKADPVTQFLECLYVKFDFEGAQRTLAECDKALRSDYFLCNCADAFMEDARLFVFETYCRIHTKIDIGMLSDKLVMEREKAERWVVDLIRGALLDAKIDSQDSCVVMGTDTTSVYSQVIDKTRDLSNRSAALLSALE 434
BLAST of mRNA_P-fluviatile_contig23.5253.1 vs. uniprot
Match: A0A443NMQ5_9MAGN (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NMQ5_9MAGN) HSP 1 Score: 380 bits (975), Expect = 9.160e-119 Identity = 205/464 (44.18%), Postives = 294/464 (63.36%), Query Frame = 2
Query: 242 SKYDLTRTISKYLDLHLMFPLLDFLDITNIYPADQVAQARLDLLDATNMSDYAIEIYKNLNNTDEDPPDMVERRAEVFARMSTLKEEAGVLTAIFADKATVEEAPMTQTDSSAFTPQQQVVENLIKEQNFTWKGIKAGLELDDSALESYYANAKYKSDCGDYVTAAAALKNYCEITQTPGVPGSGPNGMSALWGRLVCEILVANWDGALTVLRELKACIEFTN-APPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGRKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCN-----------CAGEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMEIEAAEKWIVDLIRGSKLDAKIDSRNNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLAADTA 1597
+ YDLTR I+ +LD HL+FPLL+FL Y D++ +A+++LL TNM DYA++I+K+L +T++ P DMV+RR EV R+ +L+E A AP+ +F +V+ L ++ + + + ++ +E+ Y AK++ +CG+Y AA L Y + + +SALWG+L EIL+ NWD AL L LK I+ N PL QLQ R WL+HWSLF+FFNH NGR+ ++ LFF++ +M AIQTN LLRY+ TA+++ K R+ ++++L++V++QE+H+Y DP+TEFLE L V++DFDGAQ +L ECE V+L+D FL EF+E AR FIFETYCRIH IDIGMLAEK+ M + AE+WIV+L+R +KLDAKIDS++ VIMG +VY+QIM TK L+VR+Y L + + AA TA
Sbjct: 2 ASYDLTRRIAPHLDRHLVFPLLEFLQERQFYGDDEILKAKIELLSKTNMVDYAMDIHKSLYHTEDVPQDMVDRRVEVVGRLKSLEESA---------------APLI-----SFLQNASLVQELRPDKQYNLQMLNDRFQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCT------NNERSLSALWGKLAAEILMQNWDVALEELNRLKEIIDSKNFVSPLSQLQNRIWLMHWSLFIFFNHENGRNGIIDLFFQDRYMNAIQTNAHHLLRYVATAVVVNKR----RRNMLKELIKVIQQEQHSYKDPITEFLECLYVNYDFDGAQRKLRECEDVILNDPFLGKRVEDSSFTTVPLRDEFLENARLFIFETYCRIHQCIDIGMLAEKLDMSYDEAERWIVNLVRNAKLDAKIDSKSGTVIMGPNHLNVYEQIMESTKQLSVRTYMLAKNVSESAAQTA 435
BLAST of mRNA_P-fluviatile_contig23.5253.1 vs. uniprot
Match: UPI001F04876B (eukaryotic translation initiation factor 3 subunit E-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04876B) HSP 1 Score: 379 bits (974), Expect = 1.900e-118 Identity = 205/441 (46.49%), Postives = 288/441 (65.31%), Query Frame = 2
Query: 242 SKYDLTRTISKYLDLHLMFPLLDFLDITNIYPADQVAQARLDLLDATNMSDYAIEIYKNLNNTDEDPPDMVERRAEVFARMSTLKEEAGVLTAIFADKATVEEAPMTQTDSSAFTPQQQVVENLIKEQNFTWKGIKAGLELDDSALESYYANAKYKSDCGDYVTAAAALKNYCEITQTPGVPGSGPNGMSALWGRLVCEILVANWDGALTVLRELKACIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEP-FMQAIQTNCPWLLRYLVTAIILTKAGAGGRKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCNCAGEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMEIEAAEKWIVDLIRGSKLDAKIDSRNNNVIMGGTFPSVYQQIMGKTKDLTVRSYTL 1561
++ DLT I YLD HL+FPL++FL + +Y ++V Q L+LL+ T M D A++++K +N +E P +++E+RA+V + L+E++ +T +F D+ VE+A ++ F E + KE+ G+E + A+E+ Y +K++ +CG+Y +AA L Y + + P + ALWG+L EIL+ NWD AL L LK ++ + P L+QLQ R+WLLHWSLFV+FNHA GRD L+ LF +P ++ AIQT CP +LRYL TA+I TK R+ V++DL++V+EQE +AY DP+TEFL+ L V F+FDGAQ +L ECE VL +DFFLC C EF E AR FIFET+CRIH I IGMLAEK+ M E AE+WIV+LIR ++LDAKIDS +V+MG PSVYQQ+M KTK L + L
Sbjct: 2 AEQDLTSKIGCYLDRHLVFPLMEFLSVKQVYDENEVLQCILELLNNTKMVDLAMDVFKRINPDEEIPEELIEKRAQVVKELKQLEEKSEPVTKLFQDEEFVEKAQTSRDGKHLF-------EFIQKEK---------GVEYE--AVENLYHYSKFQYECGNYSSAADNLYFYRILAHH-----TEPKTVDALWGKLASEILMQNWDAALVDLDSLKEVVDQNHYPELQQLQLRTWLLHWSLFVYFNHAKGRDLLIDLFLYQPKYLNAIQTMCPHILRYLTTAVITTKR----RRVVLKDLVKVIEQESYAYKDPITEFLQCLYVDFNFDGAQKKLRECETVLKNDFFLCGCIDEFRENARLFIFETFCRIHQCISIGMLAEKLDMSPEEAERWIVNLIRNARLDAKIDSEKGHVVMGTQSPSVYQQVMEKTKGLLFKCQVL 415
BLAST of mRNA_P-fluviatile_contig23.5253.1 vs. uniprot
Match: A9SFG7_PHYPA (Eukaryotic translation initiation factor 3 subunit E n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A9SFG7_PHYPA) HSP 1 Score: 379 bits (972), Expect = 2.880e-118 Identity = 205/466 (43.99%), Postives = 298/466 (63.95%), Query Frame = 2
Query: 242 SKYDLTRTISKYLDLHLMFPLLDFLDITNIYPADQVAQARLDLLDATNMSDYAIEIYKNLNNTDEDPPDMVERRAEVFARMSTLKEEAGVLTAIFADKATVEEAPMTQTDSSAFTPQQQVVENLIKEQNFTWKGIKAGLELDDSALESYYANAKYKSDCGDYVTAAAALKNYCEITQTPGVPGSGPNGMSALWGRLVCEILVANWDGALTVLRELKACIEFTN-APPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGRKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCN-----------CAGEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMEIEAAEKWIVDLIRGSKLDAKIDSRNNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLV-NMLKQLAADTAA 1600
++YDLT ++ +LD HL+FPLL+FL +Y DQ+ +A+++LL TNM DYA++I+K+L +T++ P DMV+RRAEV R+ L+E A L + + A V+E L +Q + + ++ ++ +E+ Y AK++ +CG+Y A+ L Y + + +SALWG+L CEIL+ NWD A + LK I+ + A PL QLQQR+WL+HWSLF+FFNH NG++ ++ LFF E ++ AIQTN LLRYLVTA+I+ K R+ V+++L++V++QE++ Y+DPVTEFLE L V++DF+GAQ +L ECE V++SDFFL EFME AR FIFETYCRIH IDIGML++K+ M + A +WI +LIR ++LDAKIDS+ V+MG P++Y+QI+ KTK L RSY L N++ AA TA+
Sbjct: 2 AQYDLTAAVAPFLDRHLVFPLLEFLQENQLYSDDQILKAKIELLAKTNMVDYAMDIHKSLYHTEDVPQDMVDRRAEVVGRLKVLEESAAPLISFLQNPALVQE--------------------LRSDQQYNLQMLQERYQIGSDQIEALYQYAKFQFECGNYSGASDYLYQYRTLCT------NSERSISALWGKLACEILMQNWDVATEEVNRLKETIDSKSFASPLSQLQQRTWLMHWSLFIFFNHDNGKNGIIDLFFSERYLNAIQTNAHHLLRYLVTAVIVNKR----RRNVIKELIKVIQQERYTYSDPVTEFLECLYVNYDFEGAQQKLRECEEVIVSDFFLGKQLSENGFVTIPLRDEFMENARLFIFETYCRIHQCIDIGMLSQKLNMNYDDAARWIANLIRNARLDAKIDSKMGTVVMGTQSPNIYEQIIEKTKVLGQRSYALTSNLILTSAAVTAS 437
BLAST of mRNA_P-fluviatile_contig23.5253.1 vs. uniprot
Match: A0A176VI58_MARPO (Eukaryotic translation initiation factor 3 subunit E n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VI58_MARPO) HSP 1 Score: 378 bits (970), Expect = 5.670e-118 Identity = 201/467 (43.04%), Postives = 298/467 (63.81%), Query Frame = 2
Query: 242 SKYDLTRTISKYLDLHLMFPLLDFLDITNIYPADQVAQARLDLLDATNMSDYAIEIYKNLNNTDEDPPDMVERRAEVFARMSTLKEEAGVLTAIFADKATVEEAPMTQTDSSAFTPQQQVVENLIKEQNFTWKGIKAGLELDDSALESYYANAKYKSDCGDYVTAAAALKNYCEITQTPGVPGSGPNGMSALWGRLVCEILVANWDGALTVLRELKACIEFTN-APPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGRKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCN-----------CAGEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMEIEAAEKWIVDLIRGSKLDAKIDSRNNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLAADTAAGV 1606
++YDLT ++ YLD HL+FPLL+FL +Y DQ+ +A+++LL TNM DYA++I+K+L +T++ P +MV+RR EV R+ +L+E A AP+ +F Q+V+ L ++ + + + ++ +E+ Y AK++ +CG+Y A+ L Y + + SALWG+L EIL+ NWD A+ L LK I+ N + PL QLQQR+W++HW+LF+FFNH NGR+ ++ LFF+E ++ AIQTN LLRYL TA+I+ K R+ +++DL++V++QE + Y DP+TEFLE L V++DF+GAQ +L ECE ++L+DFFL EF+E AR FIFETYCRIH IDIGML++K+ M + AE+WIV+LIR ++LDAKIDS+ V+MG + +VY+QI+ KTK L VRSY L N + A+ T A +
Sbjct: 2 AQYDLTAKVAPYLDRHLVFPLLEFLQEKQLYADDQILKAKIELLAKTNMVDYAMDIHKSLYHTEDVPQEMVDRRVEVVGRLKSLEELA---------------APLI-----SFLQNPQLVQELRSDKQYNLQMLHDRYKIGSEQIEALYQYAKFQFECGNYSGASDYLYQYRTLCT------NSDRSFSALWGKLAAEILMQNWDIAIEELNRLKEIIDSKNFSSPLNQLQQRTWVMHWALFIFFNHENGRNGIIDLFFQERYLNAIQTNAHHLLRYLATAVIVNKR----RRNMLKDLIKVIQQEHYTYKDPITEFLECLYVNYDFEGAQKKLRECEELILNDFFLGKEVQDNGFVTVPLRDEFLENARLFIFETYCRIHQCIDIGMLSQKLNMNYDDAERWIVNLIRNARLDAKIDSKMGTVVMGTQYANVYEQIIDKTKQLAVRSYMLANNVAATASATQASI 438 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig23.5253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig23.5253.1 >prot_P-fluviatile_contig23.5253.1 ID=prot_P-fluviatile_contig23.5253.1|Name=mRNA_P-fluviatile_contig23.5253.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=532bp MSGAVEAASTTSKYDLTRTISKYLDLHLMFPLLDFLDITNIYPADQVAQAback to top mRNA from alignment at P-fluviatile_contig23:2350671..2359109- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig23.5253.1 ID=mRNA_P-fluviatile_contig23.5253.1|Name=mRNA_P-fluviatile_contig23.5253.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8439bp|location=Sequence derived from alignment at P-fluviatile_contig23:2350671..2359109- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig23:2350671..2359109- >mRNA_P-fluviatile_contig23.5253.1 ID=mRNA_P-fluviatile_contig23.5253.1|Name=mRNA_P-fluviatile_contig23.5253.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3192bp|location=Sequence derived from alignment at P-fluviatile_contig23:2350671..2359109- (Porterinema fluviatile SAG_2381)back to top |