mRNA_P-fluviatile_contig23.5230.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig23.5230.1 vs. uniprot
Match: D7G0V5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V5_ECTSI) HSP 1 Score: 285 bits (728), Expect = 1.130e-84 Identity = 170/311 (54.66%), Postives = 203/311 (65.27%), Query Frame = 1
Query: 1 ASRHWTEMRSDATAADALLMRQNCMILSVAATLELYDNTVTPHSHLCTNSASASSASSRRGIMERARKEVEVANGLNRQLGSVKPEMAAEMRSILLVAEMSVLGRMRDVAAVRSLVASREHDFLRCSTDLLRYCVQLAEDLLDDERSVAGLCRLCARRWLEDDPVDTRALGALYRRLLLSSSSREEALLVVEDFTARVRELHEGPSIPSEDVDYVSAKCYNLGLQLLELGRPAEAERFLGKAIGLVKLGSSQAFASRWEATICQVYRTALQAKDTGGGEFSSGIVAPAGGETLGV---GKAFLSTGLFPMP 924
ASR+W E+ SDA DALL RQNC++LS+AATLELYD+ + L + +S+S RR ++ER+RKEVEVA GLNR L VKP+MA EMRSILLVAEMSVLGR+ D AVRSLVASRE DFLRCST+LL+YC+Q +EALLVV++FTA+ R+L EGP +PSEDVDYVSAKCYNLGLQLLE+ RP EAERF+GKA+GL+KLGSS AF RWE I +VYRT LQAK ++ I+A G G+AFLSTGLFPMP
Sbjct: 827 ASRNWAEIGSDANMEDALLRRQNCVVLSIAATLELYDSKPVDGAPLAN---ATTSSSERRDMLERSRKEVEVATGLNRLLSDVKPDMATEMRSILLVAEMSVLGRLGDFVAVRSLVASREPDFLRCSTNLLQYCLQ------------------------------------------------DEALLVVDEFTAKSRDLQEGPGMPSEDVDYVSAKCYNLGLQLLEMSRPGEAERFVGKALGLLKLGSSPAFVRRWEEAIHKVYRTTLQAKGDAA-TATNPIMAGGSGSQASTAIGGRAFLSTGLFPMP 1085 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig23.5230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig23.5230.1 >prot_P-fluviatile_contig23.5230.1 ID=prot_P-fluviatile_contig23.5230.1|Name=mRNA_P-fluviatile_contig23.5230.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=302bp MRSDATAADALLMRQNCMILSVAATLELYDNTVTPHSHLCTNSASASSASback to top mRNA from alignment at P-fluviatile_contig23:2090936..2097383+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig23.5230.1 ID=mRNA_P-fluviatile_contig23.5230.1|Name=mRNA_P-fluviatile_contig23.5230.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6448bp|location=Sequence derived from alignment at P-fluviatile_contig23:2090936..2097383+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig23:2090936..2097383+ >mRNA_P-fluviatile_contig23.5230.1 ID=mRNA_P-fluviatile_contig23.5230.1|Name=mRNA_P-fluviatile_contig23.5230.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1812bp|location=Sequence derived from alignment at P-fluviatile_contig23:2090936..2097383+ (Porterinema fluviatile SAG_2381)back to top |