mRNA_P-fluviatile_contig23.5220.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig23.5220.1
Unique NamemRNA_P-fluviatile_contig23.5220.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig23.5220.1 vs. uniprot
Match: D8LFV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV3_ECTSI)

HSP 1 Score: 594 bits (1532), Expect = 3.170e-210
Identity = 308/415 (74.22%), Postives = 349/415 (84.10%), Query Frame = 1
Query:    1 PISGFECSVASMAGRGQALMVCATQEHTGKTSVSMALIAGLVRRFGPDRVGYMKPVGQKHVMVQGKDGEHIKARKSDQGTLPVDKDVAVAKEHFGLTAAYNAMSPLVLHKGYTKRFLDGEIDAWDQEKAIREGFEELIQGNDFVVVEGTGHVGVGSVVGMNNADVARLLGLEVLLVGNGGVGSTYDTMVLNQNLCHAKGVRVCAVLLNKVKMGKGFMVRDYIGKALRRDSWGAPILGVVPWAESLDQPSTMDLEILFNTTALAGRQHLLRRYSRFELVTTSLRRLLEKLGDGGINHTSTCFITHATRNDIILGLLSHSQDT----SAVAFDAGLILTGTPPGNIPHSFVSDCISRSAIPVLSVGLSTSEVVRKLENFTSKMTVKDRVRTAQVIQHYEPEIDFDALLSCASVPPPP 1233
            P++GF+    S   RG+A+ V AT+EHTGKTSVSMALIAGLVRRFGP RV YMKPVGQKHV+V GKDGE +K          VDKDVAVAKE+FGL+A YNAMSPLVL+KGYTK FLDG++D  +Q++ I++GFEELI+ NDFVVVEGTGH GVGSVVGMNNADVA LLGL+VLLVGNGG+GSTYD M LN+ LC A GVRV AVLLNKVK GK  MVR+YIGKALR +SW AP+LGVVPWAESLDQPS +DLE +F TTAL+GR+HLLRRYSRFELVTTSLR+LL+KLG GGI+   TCF+THATRNDIILGLLSHSQDT    +   FDAGLILTGTPPG++PHSFVS+ I R+AIPVLSVG+STSEV+ KLE FTSKM VKD +RT  VI HYEPEIDFDALLSCASVPP P
Sbjct:    4 PMAGFQRRCLSTQ-RGKAIFVAATKEHTGKTSVSMALIAGLVRRFGPTRVSYMKPVGQKHVLVTGKDGEDLK----------VDKDVAVAKEYFGLSAPYNAMSPLVLYKGYTKDFLDGKMDVREQKRVIQDGFEELIRSNDFVVVEGTGHTGVGSVVGMNNADVAGLLGLDVLLVGNGGLGSTYDVMALNKTLCTAGGVRVRAVLLNKVKRGKEDMVREYIGKALRTNSWDAPVLGVVPWAESLDQPSILDLEQMFGTTALSGREHLLRRYSRFELVTTSLRQLLKKLGAGGISAKPTCFVTHATRNDIILGLLSHSQDTLGEKNNAPFDAGLILTGTPPGHVPHSFVSEYIGRAAIPVLSVGMSTSEVMHKLEKFTSKMNVKDDLRTRNVIDHYEPEIDFDALLSCASVPPRP 407          
BLAST of mRNA_P-fluviatile_contig23.5220.1 vs. uniprot
Match: A0A6H5JE31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE31_9PHAE)

HSP 1 Score: 537 bits (1384), Expect = 1.890e-187
Identity = 280/397 (70.53%), Postives = 318/397 (80.10%), Query Frame = 1
Query:   43 RGQALMVCATQEHTGKTSVSMALIAGLVRRFGPDRVGYMKPVGQKHVMVQGKDGEHIKARKSDQGTLPVDKDVAVAKEHFGLTAAYNAMSPLVLHKGYTKRFLDGEIDAWDQEKAIREGFEELIQGNDFVVVEGTGHVGVGSVVGMNNADVARLLGLEVLLVGNGGVGSTYDTMVLNQNLCHAKGVRVCAVLLNKVKMGKGFMVRDYIGKALRRDSWGAPILGVVPWAESLDQPSTMDLEILFNTTALAGRQHLLRRYSRFELVTTSLRRLLEKLGDGGINHTSTCFITHATRNDIILGLLSHSQDTSAVAFDAGLILTGTPPGNIPHSFVSDCISRSAIPVLSVGLSTSEVVRKLENFTSKMTVKDRVRTAQVIQHYEPEIDFDALLSCASVPPPP 1233
            RG+A+ V ATQEHTGKTSVSMALIAGLVRRFGP RV YMKPVGQKHV+V                    DKDVAV +E+FGL+A YNAMSPLVL+KGYTK FLDG++D  +Q++ I++GFEELI+ NDFVVVEGTGH GVGSVVGMNNA+VA LLGL+VLLVGNGG+GSTYD M LN+ LC A GVRV AVLLNKVK GK  MVR+YIGKALR + W AP+LGVVPWAESLDQPS +DLE +F TTAL+GR+HLLRRYSRFELVTTSLR+LL+KLG GGI+   TCF+THATR+DIILGL                ILTGTPPG++PHSFVS+ I R+AIPVLSV +STSEV+ KLE FTSKM VKD +RT  VI HYEPEIDFDALLSCASVPP P
Sbjct:   65 RGKAIFVAATQEHTGKTSVSMALIAGLVRRFGPTRVSYMKPVGQKHVLV--------------------DKDVAVVREYFGLSAPYNAMSPLVLYKGYTKDFLDGKMDVREQKRVIQDGFEELIRSNDFVVVEGTGHTGVGSVVGMNNANVAGLLGLDVLLVGNGGLGSTYDVMALNKTLCTAGGVRVRAVLLNKVKRGKEDMVREYIGKALRTNLWDAPVLGVVPWAESLDQPSILDLEQMFGTTALSGREHLLRRYSRFELVTTSLRQLLKKLGGGGISAKRTCFVTHATRSDIILGL----------------ILTGTPPGHVPHSFVSEYIGRAAIPVLSVAMSTSEVMHKLEKFTSKMNVKDDLRTRNVIDHYEPEIDFDALLSCASVPPRP 425          
BLAST of mRNA_P-fluviatile_contig23.5220.1 vs. uniprot
Match: A0A836C8E0_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E0_9STRA)

HSP 1 Score: 388 bits (997), Expect = 6.600e-129
Identity = 205/395 (51.90%), Postives = 269/395 (68.10%), Query Frame = 1
Query:   58 MVCATQEHTGKTSVSMALIAGLVRRFGPDRVGYMKPVGQKHVMVQGKDGEHIKARKSDQGTLPVDKDVAVAKEHFGLTAAYNAMSPLVLHKGYTKRFLDGEIDAWDQEKAIREGFEELIQGNDFVVVEGTGHVGVGSVVGMNNADVARLLGLEVLLVGNGGVGSTYDTMVLNQNLCHAKGVRVCAVLLNKVKMGKGFMVRDYIGKALRRDSWGAPILGVVPWAESLDQPSTMDLEILFNTTALAGRQHL-------LRRYSRFELVTTSLRRLLEKLGDGGINHTSTCFITHATRNDIILGLLSHSQDTSAVA----FDAGLILTGTPPGNIPHSFVSDCISRSAIPVLSVGLSTSEVVRKLENFTSKMTVKDRVRTAQVIQHYEPEIDFDALLS 1209
            M+ AT+EHTGKTSVSMAL++GL+ RFG + VGY+KPVGQK V V    GE           L VDKDV VA+EH+GLT  Y  MSPLVL KGYT+R+LDG++D   Q  AI++ F+ ++     V+VEGTGH GVGS+VG NNADVA +LG+ V+LV NGG+GSTYD + LN+ +C +KGV V  V++NK    K    R  +  ALR   WG P++G VP A+SLD PS  DLE LF   AL     L       LRR++RFELVT +LR  ++ L D  ++ + TCF+THA+R+DIILGLLSH+ + SA A    F  GL+LTG+PPGNIP +++ + I  S +PVLSVGLST++ + ++E FT KM   D  RTA V++HY P +D +ALL+
Sbjct:    1 MIAATKEHTGKTSVSMALLSGLIARFGVENVGYIKPVGQKWVPVPDDSGE----------VLQVDKDVKVAREHWGLTCNYRDMSPLVLDKGYTRRYLDGQVDISKQFAAIQQAFDNMLSQKQVVIVEGTGHTGVGSIVGCNNADVAAVLGIGVVLVANGGLGSTYDELELNRQMCMSKGVPVSGVIINKASSDKLAATRKNLSLALR--PWGVPLIGAVPSADSLDVPSVNDLETLFGVRALNADALLRGRGGGALRRFTRFELVTAALRSFMDHLNDPAVDCSQTCFVTHASRHDIILGLLSHAAEASADADARPFQGGLMLTGSPPGNIPDNYMLEYIRDSDMPVLSVGLSTTQALARMEGFTPKMNAADTERTAAVVRHYAPHLDVEALLT 383          
BLAST of mRNA_P-fluviatile_contig23.5220.1 vs. uniprot
Match: A0A6U4F5V9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4F5V9_9STRA)

HSP 1 Score: 357 bits (917), Expect = 8.660e-117
Identity = 193/412 (46.84%), Postives = 266/412 (64.56%), Query Frame = 1
Query:   22 SVASMAGRGQALMVCATQEHTGKTSVSMALIAGLVRRFGPD---------RVGYMKPVGQKHVMVQGKDGEHIKARKSDQGTLPVDKDVAVAKEHFGLTAAYNAMSPLVLHKGYTKRFLDGEIDAWDQE---KAIREGFEELIQGNDFVVVEGTGHVGVGSVVGMNNADVARLLGLEVLLVGNGGVGSTYDTMVLNQNLCHAKGVRVCAVLLNKVKMGKGFMVRDYIGKALRRDSWGAPILGVVPWAESLDQPSTMDLEILFNTTALAGRQHLLRRYSRFELVTTSLRRLLEKLGDGGINHTSTCFITHATRNDIILGLLSH-----SQDTSAVAFDAGLILTGTPPGNIPHSFVSDCISRSAIPVLSVGLSTSEVVRKLENFTSKMTVKDRVRTAQVIQHYEPEIDFDALL 1206
            + A+MA R +A+M+CAT +H GKTSVSMAL+  + +    +         RVGYMKPVGQK V         + +R      L VDKDVA+A+EHF +   Y  MSP+++ +G T+ FLDG+   W+       +R  F +     DF+VVEGTGH GVGS++G NNA VA+ LG++V+LV NGG+GST+D + LN+  C  +GV +  V++NKV++G+    R Y+ KA+ +  W AP+LG VP+ ++LDQPS MDLE LF T  + G QH LRR+ R+ELVTTSLRR +EKL   G +  +TCF+THA+RNDIILGLLSH     S  +    F+ GLILTG+PP N P  F SD I  + IP+L+V  STS  +  ++++T K++  D VRT +VI+ Y P ID   +L
Sbjct:    3 AAAAMASR-KAVMICATWQHVGKTSVSMALVDAVGKALAANGGGEGGRTPRVGYMKPVGQKWVSA-------VNSRDPTGPVLRVDKDVALAREHFNMQMDYLDMSPIIIERGSTRDFLDGKRTEWEDPVITNRLRTAFAKNCAETDFLVVEGTGHCGVGSILGWNNARVAKALGIDVVLVANGGLGSTFDQLNLNRMACLVEGVDLAGVIVNKVRIGEEEKTRTYLEKAMNKFKWNAPLLGCVPYGDNLDQPSAMDLETLFETKLIGGFQHRLRRFDRYELVTTSLRRFMEKLAKEGDDILNTCFVTHASRNDIILGLLSHVSRLDSGLSGGKRFEGGLILTGSPPFNQPADFCSDYIHHANIPILNVPQSTSNTMDAIKSYTPKLSAADDVRTTRVIEQYSPHIDVARML 406          
BLAST of mRNA_P-fluviatile_contig23.5220.1 vs. uniprot
Match: A0A024TU32_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024TU32_9STRA)

HSP 1 Score: 319 bits (817), Expect = 2.520e-102
Identity = 182/395 (46.08%), Postives = 239/395 (60.51%), Query Frame = 1
Query:   34 MAGRGQALMVCATQEHTGKTSVSMALIAGLVRRFGPDRVGYMKPVGQKHVMVQGKDGEHIKARKSDQGTLPVDKDVAVAKEHFGLTAA-YNAMSPLVLHKGYTKRFLDGEIDAWDQEKAIREGFEELIQGNDFVVVEGTGHVGVGSVVGMNNADVARLLGLEVLLVGNGGVGSTYDTMVLNQNLCHAKGVRVCAVLLNKVKMGKGFMVRDYIGKALRRDSWGAPILGVVPWAESLDQPSTMDLEILFNTTALAGRQHLLRRYSRFELVTTSLRRLLEKLGDGGINHTSTCFITHATRNDIILGLLSHSQD---TSAVAFDAGLILTGTPPGNIPHSFVSDCISRSAIPVLSVGLSTSEVVRKLENFTSKMTVKDRVRTAQVIQHYEPEIDFDALL 1206
            MA   +A+ V AT++H GKTS  + L+ GL  RF  D +G++KPVGQ+ V+V+                + VDKDV VAKE FGLT   Y  MSP+V+  GYT+ FLDG+I    Q   IR  F+ +   NDF VVEGTGH GVGS+V +NNA VA  LG++++L+ NGG+GS +D + LN+ LC   GVRV  V+LNKV+  K  M+ DY  KAL+   WG P+LGVVP    L Q S MD E LF TT L+G    +++Y+   LVT+ LRR L +L     N   T F+ HA+RNDIILG LSHSQ+    +   F  GLILTG PP + P  +  D ISR+ +PVL    +T + +  + NFT+K    D  +     +HYE  IDFD LL
Sbjct:    1 MATSKKAVYVAATRQHVGKTSTCLGLLQGLTNRF--DHIGFLKPVGQQSVIVEN--------------NIRVDKDVRVAKEIFGLTRCDYADMSPVVIPPGYTRDFLDGKITLESQLSKIRSSFDRITSQNDFTVVEGTGHTGVGSIVNVNNARVAAELGVDMVLIANGGIGSAFDDLSLNRALCQQYGVRVRGVILNKVRPNKVDMMWDYFPKALQE--WGIPLLGVVPDLPRLAQHSMMDFEHLFKTTLLSGHSRRMKQYNAVNLVTSGLRRFLVELSSNQFN--DTLFVAHASRNDIILGFLSHSQNYELKTGQEFGGGLILTGLPPKDQPQDYTMDIISRANLPVLYAPYTTFDAMDMMGNFTAKFNATDVTKVLSCAKHYEQCIDFDKLL 375          
BLAST of mRNA_P-fluviatile_contig23.5220.1 vs. uniprot
Match: A0A8K1FHZ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHZ1_PYTOL)

HSP 1 Score: 315 bits (806), Expect = 1.100e-100
Identity = 174/395 (44.05%), Postives = 244/395 (61.77%), Query Frame = 1
Query:   34 MAGRGQALMVCATQEHTGKTSVSMALIAGLVRRFGPDRVGYMKPVGQKHVMVQGKDGEHIKARKSDQGTLPVDKDVAVAKEHFGLTAA-YNAMSPLVLHKGYTKRFLDGEIDAWDQEKAIREGFEELIQGNDFVVVEGTGHVGVGSVVGMNNADVARLLGLEVLLVGNGGVGSTYDTMVLNQNLCHAKGVRVCAVLLNKVKMGKGFMVRDYIGKALRRDSWGAPILGVVPWAESLDQPSTMDLEILFNTTALAGRQHLLRRYSRFELVTTSLRRLLEKLGDGGINHTSTCFITHATRNDIILGLLSHSQDTSAVA---FDAGLILTGTPPGNIPHSFVSDCISRSAIPVLSVGLSTSEVVRKLENFTSKMTVKDRVRTAQVIQHYEPEIDFDALL 1206
            M G+  A+ V AT++H GKTS  + L+ GL  R   + +G++KPVGQ+ V+V+              GTL VDKDVAVAKE F LT   Y  MSP+V+  GYT++FLDG+I   DQ   IR+ FE +   ND+ +VEGTGH GVGS+V ++NA VA  LG++++L+ NGG+GS +D + LN  LC   GV+V  V+LNKV+  K  MV++Y  KAL++  W  P++G+VP   +L   S +D E LFNT  L+  +   ++Y    LVT+ LRR L KL     N+  T F+THA+RNDIILG LSHSQ+  A     F+ GLILTG PP + P  ++ D I  +  PVL   ++T E + ++  FT+K    DR +  +  +HY   +DFD +L
Sbjct:    1 MTGKKAAVYVAATRQHVGKTSTCVGLLHGLTSRI--NNIGFLKPVGQESVLVEN-------------GTLRVDKDVAVAKEIFHLTECQYADMSPVVIPPGYTRQFLDGKITLEDQLAKIRQSFERITSKNDYTIVEGTGHTGVGSIVNISNARVAAELGIDMILIANGGIGSAFDDLALNYALCKEHGVKVRGVILNKVRPDKMDMVQEYFPKALKQ--WDIPLIGIVPNLPALANCSMLDFEGLFNTKMLSAHERRFQQYKSTTLVTSGLRRFLAKLASN--NYNDTLFVTHASRNDIILGFLSHSQNYEARTGQPFNGGLILTGLPPIDQPQEYIMDIIKGANAPVLYAPVTTFEAMERITRFTAKFNPTDRQKVLRCGEHYAQRLDFDVVL 376          
BLAST of mRNA_P-fluviatile_contig23.5220.1 vs. uniprot
Match: D0N8P2_PHYIT (DRTGG domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=D0N8P2_PHYIT)

HSP 1 Score: 310 bits (793), Expect = 1.160e-98
Identity = 172/391 (43.99%), Postives = 239/391 (61.13%), Query Frame = 1
Query:   49 QALMVCATQEHTGKTSVSMALIAGLVRRFGPDRVGYMKPVGQKHVMVQGKDGEHIKARKSDQGTLPVDKDVAVAKEHFGL-TAAYNAMSPLVLHKGYTKRFLDGEIDAWDQEKAIREGFEELIQGNDFVVVEGTGHVGVGSVVGMNNADVARLLGLEVLLVGNGGVGSTYDTMVLNQNLCHAKGVRVCAVLLNKVKMGKGFMVRDYIGKALRRDSWGAPILGVVPWAESLDQPSTMDLEILFNTTALAGRQHLLRRYSRFELVTTSLRRLLEKLGDGGINHTSTCFITHATRNDIILGLLSHSQD---TSAVAFDAGLILTGTPPGNIPHSFVSDCISRSAIPVLSVGLSTSEVVRKLENFTSKMTVKDRVRTAQVIQHYEPEIDFDALLS 1209
            +A+ V AT++H GKTS  + L+ GL  R   DR+G++KPVGQ+ V V+G             G+L VDKDVAVAKE F L T  Y  MSP+V+  GYTKRFLDG I    Q   IR  F+ + + N+F VVEGTGH GVGS+V  NNA +A  LG++++LV NGG+GS +D + LN ++C    VRV  V+LNKV+  +  MVR+Y  KA++      P++GVVP    L  PS +D E LFNT  L       ++Y++  LVT  LRR L KL +   +HT   F+TH +RNDIILG LSH+Q+   T    +  GLILTG+P  +    ++++ I  + +PVL V ++T E + K+ +FT+K    D  +     +HY   IDFDA+L+
Sbjct:   10 KAVYVAATRQHVGKTSTCLGLLQGLTARL--DRIGFLKPVGQESVAVEG-------------GSLRVDKDVAVAKEVFKLDTCNYADMSPVVIMPGYTKRFLDGHITVESQLDKIRTSFKRITEANEFTVVEGTGHTGVGSIVDCNNARIAAELGVDMVLVANGGLGSAFDDLALNYSMCKTHNVRVRGVILNKVREDRVEMVREYFPKAMKHWGSNVPLIGVVPNLPLLSNPSMLDFEGLFNTQMLTLSSRRYQQYNKTTLVTAGLRRFLAKLSEPAFDHT--LFVTHVSRNDIILGFLSHAQNFELTMKKPYGGGLILTGSPSDDNQQEYITNIIKNAQVPVLYVPMTTFEAMEKITHFTAKFNPTDEHKVHACGEHYASNIDFDAILT 383          
BLAST of mRNA_P-fluviatile_contig23.5220.1 vs. uniprot
Match: A0A067CJP5_SAPPC (DRTGG domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJP5_SAPPC)

HSP 1 Score: 307 bits (787), Expect = 6.980e-98
Identity = 173/390 (44.36%), Postives = 232/390 (59.49%), Query Frame = 1
Query:   49 QALMVCATQEHTGKTSVSMALIAGLVRRFGPDRVGYMKPVGQKHVMVQGKDGEHIKARKSDQGTLPVDKDVAVAKEHFGL-TAAYNAMSPLVLHKGYTKRFLDGEIDAWDQEKAIREGFEELIQGNDFVVVEGTGHVGVGSVVGMNNADVARLLGLEVLLVGNGGVGSTYDTMVLNQNLCHAKGVRVCAVLLNKVKMGKGFMVRDYIGKALRRDSWGAPILGVVPWAESLDQPSTMDLEILFNTTALAGRQHLLRRYSRFELVTTSLRRLLEKLGDGGINHTSTCFITHATRNDIILGLLSHSQD---TSAVAFDAGLILTGTPPGNIPHSFVSDCISRSAIPVLSVGLSTSEVVRKLENFTSKMTVKDRVRTAQVIQHYEPEIDFDALL 1206
            +A+ V AT++H GKTS  + L+ GL  RF  + +GY+KPVGQ+ V+V G               L VD+DV VAKE F L    Y  MSP+V+  GYT+ +LDG+I    Q + I   F  +   NDF VVEGTGH GVGS+V +NNA VA  LGL+++L+ NGG+GS +D + LN+ +C   GV++C V+LNKV+  K  M+ DY  KAL++  W  P+LGVVP    L QPS +D E LF T  L+G    + ++    LVT+ LRR L KL     N   T F+THA+RNDIILG LSHSQ+    +   F  GLILTG PP + P  ++ + ISRS  PVL   L+T   +  +  FT+K    D  +     +HYE  + FD LL
Sbjct:    4 KAVYVAATRQHVGKTSTCLGLLQGLTNRF--ENIGYIKPVGQQSVLVSG--------------NLRVDRDVRVAKEVFNLKNCDYADMSPVVIPSGYTREYLDGKISLESQLEKISSSFNRIAARNDFTVVEGTGHTGVGSIVNVNNARVAAELGLDMILIANGGIGSAFDDLALNRVMCKEYGVKICGVILNKVRADKMDMMWDYFPKALKQ--WDVPLLGVVPDLPRLAQPSMLDFEELFGTKLLSGSNRRMTQFRNISLVTSGLRRFLVKLSSHEFN--DTLFVTHASRNDIILGFLSHSQNYELKTGREFGGGLILTGRPPVDQPQDYIMEIISRSTSPVLYAPLTTYRAMDLMTGFTAKFNATDVGKVLTCAKHYENFVKFDTLL 373          
BLAST of mRNA_P-fluviatile_contig23.5220.1 vs. uniprot
Match: H3GRB5_PHYRM (DRTGG domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=H3GRB5_PHYRM)

HSP 1 Score: 307 bits (787), Expect = 7.440e-98
Identity = 172/391 (43.99%), Postives = 235/391 (60.10%), Query Frame = 1
Query:   49 QALMVCATQEHTGKTSVSMALIAGLVRRFGPDRVGYMKPVGQKHVMVQGKDGEHIKARKSDQGTLPVDKDVAVAKEHFGL-TAAYNAMSPLVLHKGYTKRFLDGEIDAWDQEKAIREGFEELIQGNDFVVVEGTGHVGVGSVVGMNNADVARLLGLEVLLVGNGGVGSTYDTMVLNQNLCHAKGVRVCAVLLNKVKMGKGFMVRDYIGKALRRDSWGAPILGVVPWAESLDQPSTMDLEILFNTTALAGRQHLLRRYSRFELVTTSLRRLLEKLGDGGINHTSTCFITHATRNDIILGLLSHSQDTSAVA---FDAGLILTGTPPGNIPHSFVSDCISRSAIPVLSVGLSTSEVVRKLENFTSKMTVKDRVRTAQVIQHYEPEIDFDALLS 1209
            +A+ V AT++H GKTS  + L+ GL  R   DR+G++KPVGQ+ V V+G             G+L VDKDVAVAKE F L T  Y  MSP+V+  GYTKRFLDG I    Q   IR  F+++ + N+F VVEGTGH GVGS+V  NNA +A  LG++++LV NGG+GS +D + LN ++C   GV++  V+LNKV   +  MVR+Y  KA++      P++GVVP   SL  PS +D E LF T  L  R    ++Y +  LVT  LRR L KL      +T   F+TH +RNDIILG LSH+Q+   +    +  GLILTGTP  + P  ++ + I  +  PVL V  +T   + K+ +FT+K    D  +     +HY   IDFDA+LS
Sbjct:    3 KAVYVAATRQHVGKTSTCLGLLQGLTARL--DRIGFLKPVGQESVAVEG-------------GSLRVDKDVAVAKEVFKLATCDYADMSPVVIMPGYTKRFLDGHITVESQLDKIRSSFKKIAEANEFTVVEGTGHTGVGSIVDCNNARIAAELGVDMVLVANGGLGSAFDDLALNYSMCKTHGVKIRGVILNKVLENRVDMVREYFPKAMKHWGGDVPLIGVVPNLPSLSNPSMLDFEGLFQTAMLTARSRRFQQYDKTTLVTAGLRRFLAKLTSPEFENT--LFVTHISRNDIILGFLSHAQNFELMMKRPYGGGLILTGTPSEDHPEEYIMNIIKNAQAPVLYVPTTTFAAMEKITHFTAKFNPTDEQKVHACGEHYAKHIDFDAILS 376          
BLAST of mRNA_P-fluviatile_contig23.5220.1 vs. uniprot
Match: A0A835ZCE9_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCE9_9STRA)

HSP 1 Score: 308 bits (789), Expect = 7.450e-98
Identity = 175/393 (44.53%), Postives = 252/393 (64.12%), Query Frame = 1
Query:   34 MAGRGQALMVCATQEHTGKTSVSMALIAGLVRRFGPDRVGYMKPVGQKHVMVQGKDGEHIKARKSDQGTLPVDKDVAVAKEHFGLTAAYNAMSPLVLHKGYTKRFLDGEIDAWDQEKAIREGFEELIQGNDFVVVEGTGHVGVGSVVGMNNADVARLLGLEVLLVGNGGVGSTYDTMVLNQNLCHAKGVRVCAVLLNKVKMGKGFMVRDYIGKALRRDSWGAPILGVVPWAESLDQPSTMDLEILFNTTALAGRQHLLRRYSRFELVTTSLRRLLEKLGDGGINHTS-TCFITHATRNDIILGLLSHSQDTS-AVAFDAGLILTGTPPGNIPHSFVSDCISRSAIPVLSVGLSTSEVVRKLENFTSKMTVKDRVRTAQVIQHYEPEIDFDALL 1206
            M G+ +ALMV AT++H GKTS+ MAL++   +RFG   VG++KPVGQ+   V+ K+G  I            D+D  +A+ HFGL+     +SP+++ +GYTK +++G +D+  Q + IR GFE ++  ++F +VEGTGHVGVGSVVG++NA+VAR LG+ V+L+G GG+GSTYD + LN+ LC   GVRV  V++NKV+  K  MV+ Y+  A ++   GAP+LG+VP     D PS  DLE LF    L+ R   LRR++R+ELVTTSLRR +EK+          TCFITHA+R D+I+GL +H  +T+ A  F+ GLIL+G     +P S V + +SRS  PVL    +T+E +RK+  +T+KM   D      +I    P ID + +L
Sbjct:    1 MPGQPRALMVVATKQHVGKTSMCMALMSACRQRFGKGNVGFIKPVGQR--WVETKEGARI------------DQDANLARLHFGLSDPPQNLSPVIISQGYTKAYVEGRVDSRAQWERIRRGFEAVVDSHEFTIVEGTGHVGVGSVVGLSNAEVARRLGIPVVLIGTGGLGSTYDELALNKQLCDNLGVRVSGVIVNKVRTSKLPMVQHYMSLACQQ--LGAPLLGIVPHTAGFDSPSCADLEHLFGEKMLSRRDAALRRFNRYELVTTSLRRFMEKINREPPEQLGRTCFITHASRVDLIMGLHTHVMNTARADRFECGLILSGGV--QLPAS-VCNYLSRSKFPVLKSRETTAETMRKIAGYTAKMDPSDPGTVDALISQVAPHIDLELML 374          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig23.5220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFV3_ECTSI3.170e-21074.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JE31_9PHAE1.890e-18770.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C8E0_9STRA6.600e-12951.90AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6U4F5V9_9STRA8.660e-11746.84Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A024TU32_9STRA2.520e-10246.08Uncharacterized protein n=6 Tax=Aphanomyces TaxID=... [more]
A0A8K1FHZ1_PYTOL1.100e-10044.05Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0N8P2_PHYIT1.160e-9843.99DRTGG domain-containing protein n=12 Tax=Phytophth... [more]
A0A067CJP5_SAPPC6.980e-9844.36DRTGG domain-containing protein n=4 Tax=Saprolegni... [more]
H3GRB5_PHYRM7.440e-9843.99DRTGG domain-containing protein n=4 Tax=Phytophtho... [more]
A0A835ZCE9_9STRA7.450e-9844.53AAA domain-containing protein n=1 Tax=Tribonema mi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig23contigP-fluviatile_contig23:1979704..1984652 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score594.0
Seed ortholog evalue5.3e-167
Seed eggNOG ortholog2880.D8LFV3
EggNOG free text desc.AAA domain
EggNOG OGs2RN67@2759,COG0857@1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDRTGG
Ec32 orthologEc-05_005400.1
Exons10
Model size1362
Cds size1206
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig23.5220.1prot_P-fluviatile_contig23.5220.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig23 1979827..1984619 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816013.6930773-UTR-P-fluviatile_contig23:1979703..19798261622816013.6930773-UTR-P-fluviatile_contig23:1979703..1979826Porterinema fluviatile SAG_2381UTRP-fluviatile_contig23 1979704..1979826 -
1693564076.7134233-UTR-P-fluviatile_contig23:1979703..19798261693564076.7134233-UTR-P-fluviatile_contig23:1979703..1979826Porterinema fluviatile SAG_2381UTRP-fluviatile_contig23 1979704..1979826 -
1622816013.8195198-UTR-P-fluviatile_contig23:1984619..19846521622816013.8195198-UTR-P-fluviatile_contig23:1984619..1984652Porterinema fluviatile SAG_2381UTRP-fluviatile_contig23 1984620..1984652 -
1693564076.8251662-UTR-P-fluviatile_contig23:1984619..19846521693564076.8251662-UTR-P-fluviatile_contig23:1984619..1984652Porterinema fluviatile SAG_2381UTRP-fluviatile_contig23 1984620..1984652 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816013.704767-CDS-P-fluviatile_contig23:1979826..19800651622816013.704767-CDS-P-fluviatile_contig23:1979826..1980065Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1979827..1980065 -
1693564076.7269819-CDS-P-fluviatile_contig23:1979826..19800651693564076.7269819-CDS-P-fluviatile_contig23:1979826..1980065Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1979827..1980065 -
1622816013.718509-CDS-P-fluviatile_contig23:1980403..19804661622816013.718509-CDS-P-fluviatile_contig23:1980403..1980466Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1980404..1980466 -
1693564076.735554-CDS-P-fluviatile_contig23:1980403..19804661693564076.735554-CDS-P-fluviatile_contig23:1980403..1980466Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1980404..1980466 -
1622816013.7309387-CDS-P-fluviatile_contig23:1980702..19808271622816013.7309387-CDS-P-fluviatile_contig23:1980702..1980827Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1980703..1980827 -
1693564076.7457519-CDS-P-fluviatile_contig23:1980702..19808271693564076.7457519-CDS-P-fluviatile_contig23:1980702..1980827Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1980703..1980827 -
1622816013.7414691-CDS-P-fluviatile_contig23:1980983..19811011622816013.7414691-CDS-P-fluviatile_contig23:1980983..1981101Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1980984..1981101 -
1693564076.7550418-CDS-P-fluviatile_contig23:1980983..19811011693564076.7550418-CDS-P-fluviatile_contig23:1980983..1981101Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1980984..1981101 -
1622816013.7514596-CDS-P-fluviatile_contig23:1981427..19814941622816013.7514596-CDS-P-fluviatile_contig23:1981427..1981494Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1981428..1981494 -
1693564076.7643301-CDS-P-fluviatile_contig23:1981427..19814941693564076.7643301-CDS-P-fluviatile_contig23:1981427..1981494Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1981428..1981494 -
1622816013.7632487-CDS-P-fluviatile_contig23:1981939..19821091622816013.7632487-CDS-P-fluviatile_contig23:1981939..1982109Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1981940..1982109 -
1693564076.7757878-CDS-P-fluviatile_contig23:1981939..19821091693564076.7757878-CDS-P-fluviatile_contig23:1981939..1982109Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1981940..1982109 -
1622816013.773061-CDS-P-fluviatile_contig23:1982728..19828251622816013.773061-CDS-P-fluviatile_contig23:1982728..1982825Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1982729..1982825 -
1693564076.7863407-CDS-P-fluviatile_contig23:1982728..19828251693564076.7863407-CDS-P-fluviatile_contig23:1982728..1982825Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1982729..1982825 -
1622816013.782324-CDS-P-fluviatile_contig23:1983056..19831701622816013.782324-CDS-P-fluviatile_contig23:1983056..1983170Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1983057..1983170 -
1693564076.800977-CDS-P-fluviatile_contig23:1983056..19831701693564076.800977-CDS-P-fluviatile_contig23:1983056..1983170Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1983057..1983170 -
1622816013.7938972-CDS-P-fluviatile_contig23:1983757..19838721622816013.7938972-CDS-P-fluviatile_contig23:1983757..1983872Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1983758..1983872 -
1693564076.808987-CDS-P-fluviatile_contig23:1983757..19838721693564076.808987-CDS-P-fluviatile_contig23:1983757..1983872Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1983758..1983872 -
1622816013.8070445-CDS-P-fluviatile_contig23:1984521..19846191622816013.8070445-CDS-P-fluviatile_contig23:1984521..1984619Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1984522..1984619 -
1693564076.81689-CDS-P-fluviatile_contig23:1984521..19846191693564076.81689-CDS-P-fluviatile_contig23:1984521..1984619Porterinema fluviatile SAG_2381CDSP-fluviatile_contig23 1984522..1984619 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig23.5220.1

>prot_P-fluviatile_contig23.5220.1 ID=prot_P-fluviatile_contig23.5220.1|Name=mRNA_P-fluviatile_contig23.5220.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=402bp
MAGRGQALMVCATQEHTGKTSVSMALIAGLVRRFGPDRVGYMKPVGQKHV
MVQGKDGEHIKARKSDQGTLPVDKDVAVAKEHFGLTAAYNAMSPLVLHKG
YTKRFLDGEIDAWDQEKAIREGFEELIQGNDFVVVEGTGHVGVGSVVGMN
NADVARLLGLEVLLVGNGGVGSTYDTMVLNQNLCHAKGVRVCAVLLNKVK
MGKGFMVRDYIGKALRRDSWGAPILGVVPWAESLDQPSTMDLEILFNTTA
LAGRQHLLRRYSRFELVTTSLRRLLEKLGDGGINHTSTCFITHATRNDII
LGLLSHSQDTSAVAFDAGLILTGTPPGNIPHSFVSDCISRSAIPVLSVGL
STSEVVRKLENFTSKMTVKDRVRTAQVIQHYEPEIDFDALLSCASVPPPP
R*
back to top

mRNA from alignment at P-fluviatile_contig23:1979704..1984652-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig23.5220.1 ID=mRNA_P-fluviatile_contig23.5220.1|Name=mRNA_P-fluviatile_contig23.5220.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4949bp|location=Sequence derived from alignment at P-fluviatile_contig23:1979704..1984652- (Porterinema fluviatile SAG_2381)
CCCATCTCGGGCTTTGAATGCTCTGTGGCATCGATGGCAGGCCGAGGGCA AGCCCTGATGGTCTGTGCTACGCAGGAGCACACGGGGAAGACGAGCGTCA GCATGGCCCTGATTGCGGGCCTCGTGCGCAGGTGATCACCTCGCGTGCGT GTCTGCACTTCCGAATGTTTCGCTCAAATGGTCGATCCCTAAATTCCTTC ATCATCCTTCCCCCAAGTGCCATCATTTTCATGTGATCATAGGACCCGCT GTAACGTTCGTCACTCTGTACATGTGAGGTCTGTCGAAGGCATATGTTCT TCGATTATGAAAATGTCTTGTACTGTGTGGTGGTGGGCCACCCCACCTAT GCTTGATCTCCAAGTCAGCAACGGTATTCATGAGGATCGCAGCTTGAGGC CATTATAAACATTTGCTCTCATGTGCCACTTGCACAGTTATTCGACCATA TATTGTTCTGCAATTCGGCCTTCCCCATGACCTCATCGACAAAGAAGTAA TCCTTACCCCGGTTTCTTTCCCGTTCTCCTTCTTTCAATTCTACGAGCTC ACCTATTGCGAACGCTCCATTCTTCTGAGAGAGCGAAACAGGTGAAATGA TTGGGGCGTATTAGGGACCATTTCTCCGCGATAGGTGGATATATGAGGAA GATGAAAACATGATGCGATGTGGAGCAAAGTGGACCGGTTGGACCCGGCA TATGTGACCATCTTGGTGCTTTGAAAGGTTGATGAGCGCATTTCTGCGTG CGGCTTGATTTTCCCCGTTGATTGTGGCAGGTTCGGACCGGATCGCGTGG GCTACATGAAACCCGTTGGCCAAAAGCACGTGATGGTTCAAGGGAAGGAC GGAGAGCATATCAAGGCGAGAAAGTCGGACCAAGGCACGCTTCCCGTGTG CCATAAGCGGGAGGCTATCTTACGTCGTGCAGAAAGCACGTCCCAACCAC GGGGCTGCGCTCGAGGATAATGCCGCGGGTTTCACTTGAATGAAAATTGT AGATATTACATTTGAAGCACTCAGACAATGAAAGACAAAGCCACTTGTAG TATCATTGATACCTGTGTAGTTCTAGATGTATCCACTTGTGGACATCTTG CAGATACTTTTGAGATTTTCGTTGAGTCGTTTCCCGCGTTTGACGCGGAA GCAGCGAGTCAAACCACCAACTTGCGCCGTGTGTCAGCACAACTTAGTCA ACGTGAGCGAAGGTTGAAGCATGTGCACCAAGTGTTTTTTGTGTCGAAAA CCGGTCCGGTGCAACATGATCGGATGCGCGTGGCCCAACCTCGGGTGCAC AATCGCATAGGTCACTTCTTGGCCTGCGCAATTTGAAGGTTGGAACCCAC GAAGGGTGCTTTCTGCAGGCGGGCAGGGTTCCAAAAACTAGTTACTTTGG GGTCGGGGTGTGACGAAACGCTTTCATGCCAACTAGGCCCCGTATGCTGC GGCTGCTGCTCTGCTCTACTCTGCGTTACCAGGTTGACAAGGACGTGGCT GTCGCCAAAGAGCACTTTGGCCTTACGGCGGCATATAACGCGATGTCGCC ACTCGTCCTGCATAAGGGCTACACAAAGCGTTTCCTCGACGGCGAGGTGA GCTGGCAACAGTTTCGCTGACGACACATCGGTCTGTAGTGTTTTTTTGGC GGCGGGTAGGTCTGTTCATCTGAAACAGCCACCTTATGATTTCTCGCGGC GAGCACGGCAAGCCTATGCCAACGCGCCCACTTGCTGAGGAACTCCACAT GCTTTCGTGCCTGCTTTACCGCCGGGCTGCTGAACCGCGGCCGTTCTTGT CTCGTGTGCTGCGGCTGTCCATCACAGATCGACGCGTGGGACCAAGAGAA GGCGATACGAGAGGGCTTCGAGGAGCTCATCCAAGGAAACGACTTTGTCG TTGTGGAAGGGACCGGTCACGTTGGTGAGACTCAATGGCGCTGCGCGACT AAGTTGTTCGCGTTACCTCTTTTTTTGCGCACGATGACCTGCAGAGAGAG ATTGCCTTTTCTTCCCGCCTTTCTTCGCGATCACGGCTGCATTCTCCTTC CTTTCTTTCGGTACACTAGTCAAGAAAACTCACGGACCGATGGCTCACTG TGTGAAAGGTGTGGGATGAACAGCACGACCTCCGTACTGACGGGGGTGAT TAAAACATTCAACTTGGAAACGGGCAAGCACCAGCTAGAAGTCATGTCGC GACGGGCCCCTGTTGGGCACAAGACTTTCGTATACAAGTCAAGACCTCCT GGACTTTCTGCGCTCAACAAGAGCGTAGTCGGCACGAGGTTCCTGAAGGC TTTCGGCCGGATGGAACTCCACGCCCTGGATGCAGTCGGTAATCGCAAGG CGCTTCACTCTCACGCAATTTAACCCACCGTGGTTCGTTGTTGGAACAAA AACAAAAGACGTGTTATAATCTTGAGGTTATTGAAATGGATGCAAGGTTC CAGGCCGGACGAGCGCGCCAAGCGCGATTTAGGCCCCAGACCTCCCTTCC CCTTGATCATGACGCATTTTCAATTGCGCGGTACTTACGGTAGGCGTCGG GAGCGTGGTCGGCATGAACAACGCTGACGTCGCGAGGTTGCTCGGGCTCG AAGTGCTCCTGGTTGGCAACGGCGGCGTGGGCTCCACCTACGACACCATG GTCCTAAACCAAAATCTGTGCCACGCCAAGGGCGTCAGGGTGTGCGCCGT CCTCTTGAACAAGGTGGGGTATTGATTCAAGAACGAGCAGTCGTTCTCGC TGAGGTAGAGGGGTGTTGTTGGGAGCCGTCATTCTTAACAAGCTGTGCGC GCGCAACTTAGCCAGACCTGGCGGGCAAAGCGGCCAGCTCGTTCGCTTGG GCCCACGATGGCTGCACGGGCGTAGGTGCCGCCTATTCTGCCCGCCAAGC GCCGAGCCTTGCCGAACTATCAGACGAATGCTTCGTACACACGGCGCACA TTTTCCTCCACCTAGAGAGGGGCAGCCCACTAGAAGCGAGGTAGTAGCCG CTGGAACCTTCGACTTGGTTGTCGACGACCTGCGCACGGTCCGGTGTGCG TGTGTTTGGCAACACTAACCATCCTCTTGCTCGAGTGCCTGCAAACCCAT TTACACGGTTTGGCTGCGGTTGTGAGCAAGTGCTGGTTGGCGGTGCCGCA TTGTACAGGTGAAGATGGGCAAGGGGTTCATGGTGAGAGACTACATCGGG AAGGCGCTGAGGCGCGACTCGTGGGGTGAGAGTATTTTTTCGCTGGACTT GCTCGCTTGCTTGCTTGCCAGAAATCATGGCAATGTTCAAGATCGGGTCT GGGTCATGGTCGCCGTGTCGCATGTTCGTCGAGATGTATCAGTTACATTC TTTGGTGGCCGGGGAGGAGGCTGTCGCCTTCAATCTTGAGTTTGGCCAAT GACCGGTGAGAAAAATGCATACGCCGGGGGCCTCACACGCGCGTGGATGG TGTGCGGTCTTCGGGCCGACTCCGGGCCGACGATGTCCCGCCTGATTTCC TACCCATGAACGGTGAAATTGTGTGGTGGACTCTTCTTTGCGCCGAAATA GGCGCTCCCATTTTGGGCGTCGTGCCCTGGGCGGAGAGCTTGGATCAACC CTCGACAATGGATCTTGAGATACTTTTCAACACGACTGCTCTGGCAGGAA GGCAGCATCTACTCCGAAGGTTGGTGACGCGCTTCGAGGTTCCCCTAACC ATCTAGCCGAGATGCTAACACGCTGCTTCGAAGCCAACCTCATTTTCCAA GGCGGATTGGCTCTTTGCTTCAAAATCCAAAACCGTCATATGAAAGAGAG CTTCCACTTTGATTCTGCCCGTCAGGTATTCGCGTTTTGAGCTCGTAACA ACGAGCCTACGGCGGCTGCTGGAGAAGCTCGGAGACGGGGGCATCAACCA CACCTCGACGTGCTTCATCACCCACGCGACAAGGAACGACATCATTCTTG GTAAGTATCACTCGCTCACGAGTCAGCACACGATGTGTCGGTAGGTCTTT CGCTGCAAGAACTTGGGGTGCCCAAAAGAACTTGCCGGTGTTGGCACGTA CATTCGCTTCGAGTGTGCTGCACTTCTCACCTTATGGTTGTCTTCGGCGT CCGATTCCCTTCGGCAAACTTGCTGCCCCCATCAAACCCCATCAGAGTGC TGCGCTAGCTGAACCATTTCGACGTGTCGGTGACAGGTCTGCTTTCTCAC TCTCAAGACACCAGCGCTGTGGCGTTCGACGCAGGGCTTATCCTTACAGG TGATTGTAAGGTTGGGTTAGTTTGTTCTTTAGTTTGATTAGTTCAATACA CCGAATGATCTTGCGCTCAACTCTTAGTGGACGCAATATCGGATATCGCC CCTTGGAAGCCATTAATTGCCTGGAAGCGTTAGACCCGCAACAAGTTCTG CCTCATGTGTTCTCAAGACCGCTGGCCGGTTATCGGCGAGCGAATACGTA GAAGCCCACGTTTGATCTTGAATGTCCGTCAACAGTTGGGTCCCGCGTTG TGCGTGCACGGATGGCGGTCTGTCGGAAACACATTCTCATGCACGTGGTG CCCAATCCGCGTTCTTGGCTGCCCTACTCACGTCCAGGTACACCGCCGGG GAACATTCCGCACTCGTTCGTGAGCGACTGCATCAGCCGTTCCGCGATAC CGGTCCTCAGCGTGGGCCTGTCGACCTCCGAGGTCGTGCGCAAGCTGGAG AATTTCACGAGCAAGATGACCGTCAAGGACAGGGTGCGGACAGCCCAAGT CATTCAGCACTATGAGCCTGAGATCGATTTCGACGCGCTGCTCTCCTGTG CGAGCGTCCCTCCGCCTCCAAGATGAGCTCGAGAGCGTTCTTCATCAGCA GCACCAGCCACAGGAGCGGCAGCAACAGGCTGCAGTAACAAAAGCAGCAG CAGCAGCAGCAATTGCAGAGTATTTTTTCGGAAGGTCACGGTTCTTGCC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig23:1979704..1984652-

>mRNA_P-fluviatile_contig23.5220.1 ID=mRNA_P-fluviatile_contig23.5220.1|Name=mRNA_P-fluviatile_contig23.5220.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2412bp|location=Sequence derived from alignment at P-fluviatile_contig23:1979704..1984652- (Porterinema fluviatile SAG_2381)
ATGGCAGGCCGAGGGCAAGCCCTGATGGTCTGTGCTACGCAGGAGCACAC
GGGGAAGACGAGCGTCAGCATGGCCCTGATTGCGGGCCTCGTGCGCAGAT
GGCAGGCCGAGGGCAAGCCCTGATGGTCTGTGCTACGCAGGAGCACACGG
GGAAGACGAGCGTCAGCATGGCCCTGATTGCGGGCCTCGTGCGCAGGTTC
GGACCGGATCGCGTGGGCTACATGAAACCCGTTGGCCAAAAGCACGTGAT
GGTTCAAGGGAAGGACGGAGAGCATATCAAGGCGAGAAAGTCGGACCAAG
GCACGCTTCCCGTTCGGACCGGATCGCGTGGGCTACATGAAACCCGTTGG
CCAAAAGCACGTGATGGTTCAAGGGAAGGACGGAGAGCATATCAAGGCGA
GAAAGTCGGACCAAGGCACGCTTCCCGTTGACAAGGACGTGGCTGTCGCC
AAAGAGCACTTTGGCCTTACGGCGGCATATAACGCGATGTCGCCACTCGT
CCTGCATAAGGGCTACACAAAGCGTTTCCTCGACGGCGAGGTTGACAAGG
ACGTGGCTGTCGCCAAAGAGCACTTTGGCCTTACGGCGGCATATAACGCG
ATGTCGCCACTCGTCCTGCATAAGGGCTACACAAAGCGTTTCCTCGACGG
CGAGATCGACGCGTGGGACCAAGAGAAGGCGATACGAGAGGGCTTCGAGG
AGCTCATCCAAGGAAACGACTTTGTCGTTGTGGAAGGGACCGGTCACGTT
GATCGACGCGTGGGACCAAGAGAAGGCGATACGAGAGGGCTTCGAGGAGC
TCATCCAAGGAAACGACTTTGTCGTTGTGGAAGGGACCGGTCACGTTGGC
GTCGGGAGCGTGGTCGGCATGAACAACGCTGACGTCGCGAGGTTGCTCGG
GCTCGAAGTGCTCCTGGTTGGCAACGGCGGCGTGGGCTCCACCTACGACA
CCATGGTCCTAAACCAAAATCTGTGCCACGCCAAGGGCGTCAGGGTGTGC
GCCGTCCTCTTGAACAAGGCGTCGGGAGCGTGGTCGGCATGAACAACGCT
GACGTCGCGAGGTTGCTCGGGCTCGAAGTGCTCCTGGTTGGCAACGGCGG
CGTGGGCTCCACCTACGACACCATGGTCCTAAACCAAAATCTGTGCCACG
CCAAGGGCGTCAGGGTGTGCGCCGTCCTCTTGAACAAGGTGAAGATGGGC
AAGGGGTTCATGGTGAGAGACTACATCGGGAAGGCGCTGAGGCGCGACTC
GTGGGGTGAAGATGGGCAAGGGGTTCATGGTGAGAGACTACATCGGGAAG
GCGCTGAGGCGCGACTCGTGGGGCGCTCCCATTTTGGGCGTCGTGCCCTG
GGCGGAGAGCTTGGATCAACCCTCGACAATGGATCTTGAGATACTTTTCA
ACACGACTGCTCTGGCAGGAAGGCAGCATCTACTCCGAAGGCGCTCCCAT
TTTGGGCGTCGTGCCCTGGGCGGAGAGCTTGGATCAACCCTCGACAATGG
ATCTTGAGATACTTTTCAACACGACTGCTCTGGCAGGAAGGCAGCATCTA
CTCCGAAGGTATTCGCGTTTTGAGCTCGTAACAACGAGCCTACGGCGGCT
GCTGGAGAAGCTCGGAGACGGGGGCATCAACCACACCTCGACGTGCTTCA
TCACCCACGCGACAAGGAACGACATCATTCTTGGTATTCGCGTTTTGAGC
TCGTAACAACGAGCCTACGGCGGCTGCTGGAGAAGCTCGGAGACGGGGGC
ATCAACCACACCTCGACGTGCTTCATCACCCACGCGACAAGGAACGACAT
CATTCTTGGTCTGCTTTCTCACTCTCAAGACACCAGCGCTGTGGCGTTCG
ACGCAGGGCTTATCCTTACAGGTCTGCTTTCTCACTCTCAAGACACCAGC
GCTGTGGCGTTCGACGCAGGGCTTATCCTTACAGGTACACCGCCGGGGAA
CATTCCGCACTCGTTCGTGAGCGACTGCATCAGCCGTTCCGCGATACCGG
TCCTCAGCGTGGGCCTGTCGACCTCCGAGGTCGTGCGCAAGCTGGAGAAT
TTCACGAGCAAGATGACCGTCAAGGACAGGGTGCGGACAGCCCAAGTCAT
TCAGCACTATGAGCCTGAGATCGATTTCGACGCGCTGCTCTCCTGTGCGA
GCGTCCCTCCGCCTCCAAGATGAGTACACCGCCGGGGAACATTCCGCACT
CGTTCGTGAGCGACTGCATCAGCCGTTCCGCGATACCGGTCCTCAGCGTG
GGCCTGTCGACCTCCGAGGTCGTGCGCAAGCTGGAGAATTTCACGAGCAA
GATGACCGTCAAGGACAGGGTGCGGACAGCCCAAGTCATTCAGCACTATG
AGCCTGAGATCGATTTCGACGCGCTGCTCTCCTGTGCGAGCGTCCCTCCG
CCTCCAAGATGA
back to top