mRNA_P-fluviatile_contig23.5161.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig23.5161.1 vs. uniprot
Match: A0A6H5JT32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT32_9PHAE) HSP 1 Score: 361 bits (927), Expect = 1.710e-112 Identity = 168/291 (57.73%), Postives = 217/291 (74.57%), Query Frame = 1
Query: 523 RMACLLSVWFGGVGAEYARSTPGEPPAYCTMFHHMVKAGGSSIKSRLQRASVMEGLGKPGQCLSGPTNEQACADAMSNSAVTAGYTELLRCPLQHSGRDCEFFTVFRHPIDRLVSAFFYCPKDHDVQHRPTKWCGFADDPQPATERLVEFAREAWGNLAFRQMSLGLCCNGGTFCEGGKAPSRASVDEPAGWDMLGEIMGLLNTYNAVGILEHWDLTMQLFNVRVKSPVRDWQEIVKTNAGQQSGLRSDVLKWAHDSPEVLHILATDILLYDHAVAVFKEQTAASLGTVWE 1395
R+ACLLS+ G A YA S PGEPP YCT+F+HMVK+GGS+IK +L A+ +G+ P C++G E +C AM ++ V GY ELLR PL+ GR+CE+FTV RHPIDRL+SAFFYCP DVQ RP KWCG+A+DPQP T+RLVEFA+ W N AFRQM+ GL C FCE + ++ +V EP GW +L +I +L TY AVGILE+WDL+MQLFN RV SPV DW+++ +N GQ+SGLR +V +WAH SPE+ ++ATD+LLYD++V+VFK QT+ASLGT+WE
Sbjct: 100 RVACLLSLRAIGCDALYAWSNPGEPPEYCTLFNHMVKSGGSTIKDKLDIAAKADGVDGPAMCVNGVGYEDSCLKAMHSAPVIVGYAELLRYPLEVIGRECEYFTVMRHPIDRLLSAFFYCPAYGDVQDRPPKWCGYANDPQPVTDRLVEFAKYGWKNKAFRQMTFGLYCPPNAFCEQAEPGAQQAVHEPGGWILLEQIEAILATYTAVGILEYWDLSMQLFNARVTSPVWDWEDMEHSNRGQRSGLRDEVHRWAHMSPEIHRVMATDMLLYDYSVSVFKLQTSASLGTIWE 390
BLAST of mRNA_P-fluviatile_contig23.5161.1 vs. uniprot
Match: D7G5K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K0_ECTSI) HSP 1 Score: 356 bits (913), Expect = 3.490e-110 Identity = 164/312 (52.56%), Postives = 218/312 (69.87%), Query Frame = 1
Query: 457 LSPKGSTMGKYAKGVAVLRQACRMACLLSVWFGGVGAEYARSTPGEPPAYCTMFHHMVKAGGSSIKSRLQRASVMEGLGKPGQCLSGPTNEQACADAMSNSAVTAGYTELLRCPLQHSGRDCEFFTVFRHPIDRLVSAFFYCPKDHDVQHRPTKWCGFADDPQPATERLVEFAREAWGNLAFRQMSLGLCCNGGTFCEGGKAPSRASVDEPAGWDMLGEIMGLLNTYNAVGILEHWDLTMQLFNVRVKSPVRDWQEIVKTNAGQQSGLRSDVLKWAHDSPEVLHILATDILLYDHAVAVFKEQTAASLGTVW 1392
L P + G A +L R+AC+ S+ G YARS PGEPP YCT+FHHMVK+ GS++KS L RA+ EGL +P C++G AC +A+++SA+ GY EL+R PL+ + R+C++FT+ RHPIDRLVSAFFYCP DHDVQ RP KWCG A+ P PATERL++FA+E+W N AF+QM+ GL C TFC+ + S +DEP D+L ++ L Y AVGI+EHWDL+MQLFN RV+SPVR+W + N G SGLR +VL+WAH+SP + ++ TD+LLY A+++FK+QT ASLGT W
Sbjct: 97 LEPASRSGGAMALHTKMLLDTVRLACVFSLLVVGSDTLYARSEPGEPPEYCTVFHHMVKSAGSTVKSLLHRATRNEGLPRPAVCINGHARTDACLEAINSSAIITGYAELIRYPLEVNRRECDYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHAEHPVPATERLLDFAQESWQNKAFKQMTFGLYCPPDTFCDEAEVESPQMLDEPGMLDILQQVQNTLAGYTAVGIMEHWDLSMQLFNARVRSPVREWNMFKQRNPGVMSGLRDEVLQWAHESPAIHRVIGTDMLLYYFALSIFKQQTTASLGTNW 408
BLAST of mRNA_P-fluviatile_contig23.5161.1 vs. uniprot
Match: A0A6H5JT23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT23_9PHAE) HSP 1 Score: 342 bits (878), Expect = 1.740e-106 Identity = 159/293 (54.27%), Postives = 212/293 (72.35%), Query Frame = 1
Query: 523 RMACLLSVWFGGVGAEYARSTPGEPPAYCTMFHHMVKAGGSSIKSRLQRASVMEGLGKPGQCLSGPTNE-QACADAMSNSAVTAGYTELLRC--PLQHSGRDCEFFTVFRHPIDRLVSAFFYCPKDHDVQHRPTKWCGFADDPQPATERLVEFAREAWGNLAFRQMSLGLCCNGGTFCEGGKAPSRASVDEPAGWDMLGEIMGLLNTYNAVGILEHWDLTMQLFNVRVKSPVRDWQEIVKTNAGQQSGLRSDVLKWAHDSPEVLHILATDILLYDHAVAVFKEQTAASLGTVW 1392
R+A +LS+ G YARS PG+PP YCT+FHHMVK+GGS+IK L +S G +PG C++G +C +A ++SAV GY EL+R PL+ RDCE+FT+ RHP+DRLVSAFFYCP DHD+Q RP KWCG+ADDP PAT+RL+EFA++ W N+A++QM+ G+ C G CE + + +DEP G D+L ++ +L+ Y AVGI+EHWDL+MQLFN RV+SPVRDW V++NAG S LR +VL+WAHDSP + ++ATD+LLY A+++FK QT SLGT W
Sbjct: 13 RLASVLSLLVVGSDTFYARSEPGQPPEYCTVFHHMVKSGGSTIKHNLHISSRAAGGPRPGSCVAGGGKRINSCKEAFNSSAVIMGYAELMRQDGPLEAVRRDCEYFTLLRHPVDRLVSAFFYCPTDHDLQLRPPKWCGYADDPLPATDRLLEFAQQHWKNMAYKQMTFGMYCPHGLICEATEVETAPGLDEPHGLDVLQKVEDILSGYTAVGIMEHWDLSMQLFNARVRSPVRDWNMTVRSNAGLPSELRDEVLQWAHDSPVIHRLMATDLLLYSFALSIFKRQTTESLGTNW 305
BLAST of mRNA_P-fluviatile_contig23.5161.1 vs. uniprot
Match: A0A6H5L5I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5I1_9PHAE) HSP 1 Score: 323 bits (827), Expect = 4.900e-99 Identity = 149/289 (51.56%), Postives = 204/289 (70.59%), Query Frame = 1
Query: 535 LLSVWFGGVGAEYARSTPGEPPAYCTMFHHMVKAGGSSIKSRLQRASVMEGLGKPGQCLSGPTNE-QACADAMSNSAVTAGYTELLR--CPLQHSGRDCEFFTVFRHPIDRLVSAFFYCPKDHDVQHRPTKWCGFADDPQPATERLVEFAREAWGNLAFRQMSLGLCCNGGTFCEGGKAPSRASVDEPAGWDMLGEIMGLLNTYNAVGILEHWDLTMQLFNVRVKSPVRDWQEIVKTNAGQQSGLRSDVLKWAHDSPEVLHILATDILLYDHAVAVFKEQTAASLGTVW 1392
+LS+ G A YARS PG+PP YCT+FHHMVK+GGS+I G +PG C++G + +C +A ++SAV GY E +R PL+ +DCE+FT+ RHP+DRLVSAFFYCPK+HDVQ RP KWCG+AD P PAT+RL+++A++ W N+A++QM+ G+ C G CE + + +DEP G D+L ++ +L+ Y AVGI+EHWDL+MQLFN RV+SPVR+W +NAG S LR +VL+WAHDSP V ++ATD+LLY A+++FK QT +LGT W
Sbjct: 17 VLSLLVVGSDAFYARSEPGQPPEYCTVFHHMVKSGGSTIXXXXXXXXXSAGDPRPGLCVAGGGEKTNSCKEAFNSSAVIMGYAEAMRQDVPLEAVRKDCEYFTLLRHPVDRLVSAFFYCPKEHDVQSRPPKWCGYADHPLPATDRLLDYAQQYWKNMAYKQMAFGMYCPHGLICEATEVRTAPGLDEPHGLDVLQKVEDILSRYTAVGIMEHWDLSMQLFNARVRSPVREWNITQHSNAGLPSELRDEVLQWAHDSPVVHRLIATDMLLYSFALSIFKRQTTEALGTNW 305
BLAST of mRNA_P-fluviatile_contig23.5161.1 vs. uniprot
Match: D8LHT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHT4_ECTSI) HSP 1 Score: 275 bits (704), Expect = 2.570e-81 Identity = 137/294 (46.60%), Postives = 183/294 (62.24%), Query Frame = 1
Query: 541 SVWFG-GVGAEYAR-STPGEPPAYCTMFHHMVKAGGSSIKSRLQRASVMEGLGKPGQCLSGPTNEQACADAMSNSAVTAGYTELLRCPLQHSGRDCEFFTVFRHPIDRLVSAFFYCPKDHDVQHRPTKWCGFADDPQPATERLVEFAREAWGNLAFRQMSLGLCCNGGTFCEGGKAPSRASVDEPA-------GWDMLGEIMGLLNTYNAVGILEHWDLTMQLFNVRVKSPVRDWQEIVKTNAGQQSGLRSDVLKWAHDSPEVLHILATDILLYDHAVAVFKEQTAASLGTVWE 1395
+VW G A Y R S +PP YCTMFHHMVK GG++++ +L AS ++G PG C+ GP++ +AC DA+ +S+V GY ELLR P++ GR C++FT+ RHPIDRLVSAF+YCP HD Q RP KWCG P P T RL++FARE W A Q+S C G FCE V+EP W +L +L +Y AVGI E W+L+M+LF+ + SPV+ W N G +S R +L+WAH SPE+ + D+LLYD A+++FK QTA +LGTVW+
Sbjct: 5 AVWRSPGCQAIYTRASMDTDPPTYCTMFHHMVKNGGTAVRDQLILASEIQGRDVPGLCVIGPSSAEACLDALHHSSVIMGYVELLRDPMEELGRRCDYFTMMRHPIDRLVSAFYYCPTFHDKQVRPNKWCGGHSHPDPLTSRLLDFAREDWMCKAMFQLSFASYCPPGAFCE------HDMVEEPPTHLNGVEDWSLLAVAEDVLLSYTAVGIFEEWELSMELFDAVISSPVQQWGGEEAVNPGPKSSEREMLLRWAHSSPEIRQAVGGDLLLYDLALSIFKRQTAEALGTVWK 292
BLAST of mRNA_P-fluviatile_contig23.5161.1 vs. uniprot
Match: A0A6H5K0M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0M4_9PHAE) HSP 1 Score: 266 bits (679), Expect = 1.770e-78 Identity = 120/231 (51.95%), Postives = 163/231 (70.56%), Query Frame = 1
Query: 706 CLSGPTNEQACADAMSNSAVTAGYTELLR--CPLQHSGRDCEFFTVFRHPIDRLVSAFFYCPKDHDVQHRPTKWCGFADDPQPATERLVEFAREAWGNLAFRQMSLGLCCNGGTFCEGGKAPSRASVDEPAGWDMLGEIMGLLNTYNAVGILEHWDLTMQLFNVRVKSPVRDWQEIVKTNAGQQSGLRSDVLKWAHDSPEVLHILATDILLYDHAVAVFKEQTAASLGTVW 1392
C++ AC +A+++SA+ GY EL+R PL+ R+C++FT+ RHPIDRLVSAFFYCP DHDVQ RP KWCG + P PATERL++FA+E+W N AF+QM+ GL C TFCE + S +DEP D+L ++ +L Y AVGI+EHWDL++QLFN RV+SPVR+W + N G + LR +VL+WAH SP + ++ TD+LLY +++FK+QT ASLGT W
Sbjct: 23 CINEQDRTNACLEAINSSAIITGYAELIRRVYPLEVERRECQYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHEEHPVPATERLLDFAQESWRNQAFKQMTFGLYCPPDTFCEEAEVDSPQMLDEPGILDVLQQVQDILAGYTAVGIMEHWDLSIQLFNARVRSPVREWNVSKQRNPGVMTRLRDEVLQWAHKSPAIHRVIGTDMLLYSFGLSIFKQQTTASLGTNW 253
BLAST of mRNA_P-fluviatile_contig23.5161.1 vs. uniprot
Match: A0A6H5JUF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUF0_9PHAE) HSP 1 Score: 238 bits (606), Expect = 1.660e-68 Identity = 110/221 (49.77%), Postives = 146/221 (66.06%), Query Frame = 1
Query: 796 PLQHSGRDCEFFTVFRHPIDRLVSAFFYCPKDHDVQHRPTKWCGFADDPQPATERLVEFAREAWGNLAFRQMSLGLCCNGGTFCEGGKAPSRAS----------------------VDEPAGWDMLGEIMGLLNTYNAVGILEHWDLTMQLFNVRVKSPVRDWQEIVKTNAGQQSGLRSDVLKWAHDSPEVLHILATDILLYDHAVAVFKEQTAASLGTVW 1392
PL+ R+C++FT+ RHPIDRLVSAFFYCP DHDVQ RP KWCG + P PATERL++FA+E+W N AF+QM+ GL C TFCE + + + +DEP D+L ++ +L Y AVGI+EHWDL+MQLFN RV+SPVR+W + N G +GLR +VL+WAH SP + ++ TD+LLY +++FK+QT ASLGT W
Sbjct: 6 PLEVERRECQYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHEEHPVPATERLLDFAQESWRNQAFKQMTFGLYCPPDTFCEVAEVNNVSQCETFVVGVGSLDGLREVGPPQMLDEPGILDVLQQVQDILAGYTAVGIMEHWDLSMQLFNARVRSPVREWNVFKQRNPGVMTGLRDEVLQWAHKSPAIHRVIGTDMLLYSFGLSIFKQQTTASLGTNW 226
BLAST of mRNA_P-fluviatile_contig23.5161.1 vs. uniprot
Match: D7FJX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX1_ECTSI) HSP 1 Score: 176 bits (447), Expect = 8.680e-48 Identity = 85/157 (54.14%), Postives = 103/157 (65.61%), Query Frame = 1
Query: 841 RHPIDRLVSAFFYCPKDHDVQHRPTKWCGFADDPQPATERLVEFAREAWGNLAFRQMSLGLCCNGGTFCEGGKAPSRASVDEPAGWDMLGEIMGLLNTYNAVGILEHWDLTMQLFNVRVKSPVRDWQEIVKTNAGQQSGLRSDVLKWAHDSPEVLHI 1311
RHPIDRL+SAFFYCP D DVQ RPTKWCG+A+DPQP T+RLVEFA W N AFRQM+ GL C FCE + G+L TY AVGILE+WDL+MQLFN RV SPV DW+++ +N GQ+SGLR +V ++ P H+
Sbjct: 2 RHPIDRLLSAFFYCPADGDVQDRPTKWCGYANDPQPVTDRLVEFAEYGWKNKAFRQMTFGLYCPPNAFCE--------------------QAEGILATYTAVGILEYWDLSMQLFNARVTSPVWDWEDMEHSNRGQRSGLRDEVDPDSNPHPNPTHL 138
BLAST of mRNA_P-fluviatile_contig23.5161.1 vs. uniprot
Match: A0A6H5JQY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY1_9PHAE) HSP 1 Score: 156 bits (394), Expect = 1.890e-40 Identity = 68/117 (58.12%), Postives = 88/117 (75.21%), Query Frame = 1
Query: 706 CLSGPTNEQACADAMSNSAVTAGYTELLR--CPLQHSGRDCEFFTVFRHPIDRLVSAFFYCPKDHDVQHRPTKWCGFADDPQPATERLVEFAREAWGNLAFRQMSLGLCCNGGTFCE 1050
C++G AC +A+++SA+ GY EL+R PL+ R+CE+FT+ RHPIDRLVSAFFYCP DHDVQ RP KWCG + P PATERL++FA+E+W N+AF+QM+ GL C TFCE
Sbjct: 23 CINGHDRTNACLEAINSSAIITGYAELIRRVYPLEVERRECEYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHEEHPVPATERLLDFAQESWQNMAFKQMTFGLYCPPDTFCE 139
BLAST of mRNA_P-fluviatile_contig23.5161.1 vs. uniprot
Match: A0A6H5J534_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J534_9PHAE) HSP 1 Score: 169 bits (429), Expect = 5.740e-40 Identity = 80/160 (50.00%), Postives = 104/160 (65.00%), Query Frame = 1
Query: 571 YARSTPGEPPAYCTMFHHMVKAGGSSIKSRLQRASVMEGLGKPGQCLSGPTNEQACADAMSNSAVTAGYTELLRCPLQHSGRDCEFFTVFRHPIDRLVSAFFYCPKDHDVQHRPTKWCGFADDPQPATERLVEFAREAWGNLAFRQMSLGLCCNGGTFCE 1050
YARS P +PP YCT+FHHMVK+ GS+IK L ++S + G+ +PG G T CA A + G R PL+ + CE+FT+ RHPIDRLVSAFFYCPKDHD+Q RP KWCG+AD P T+RL++F W N+A++QM+ G+ C CE
Sbjct: 577 YARSDPDQPPEYCTVFHHMVKSAGSTIKDNLYKSSRIAGVPRPG----GTTR---CATACHSIPFPLGRA---RVPLEAVRKGCEYFTLMRHPIDRLVSAFFYCPKDHDLQLRPRKWCGYADHQVPVTDRLLDFTEHYWQNMAYKQMAYGMYCPPDLICE 726 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig23.5161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig23.5161.1 >prot_P-fluviatile_contig23.5161.1 ID=prot_P-fluviatile_contig23.5161.1|Name=mRNA_P-fluviatile_contig23.5161.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=307bp MGKYAKGVAVLRQACRMACLLSVWFGGVGAEYARSTPGEPPAYCTMFHHMback to top mRNA from alignment at P-fluviatile_contig23:1304087..1315936- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig23.5161.1 ID=mRNA_P-fluviatile_contig23.5161.1|Name=mRNA_P-fluviatile_contig23.5161.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11850bp|location=Sequence derived from alignment at P-fluviatile_contig23:1304087..1315936- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig23:1304087..1315936- >mRNA_P-fluviatile_contig23.5161.1 ID=mRNA_P-fluviatile_contig23.5161.1|Name=mRNA_P-fluviatile_contig23.5161.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1842bp|location=Sequence derived from alignment at P-fluviatile_contig23:1304087..1315936- (Porterinema fluviatile SAG_2381)back to top |