mRNA_P-fluviatile_contig22.5009.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig22.5009.1
Unique NamemRNA_P-fluviatile_contig22.5009.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig22.5009.1 vs. uniprot
Match: A0A6H5JID1_9PHAE (ELMO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JID1_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 1.960e-117
Identity = 187/304 (61.51%), Postives = 225/304 (74.01%), Query Frame = 2 
Query:  245 AKKGRKIVRAVMKALQRAWRAVMRRVTGRSELGRILKSNEGYTNELVRAIALSIARSSE------KEAVFGHKIFDVNLVSTHLAQMKGISDQDKPRLDWCLQIFNIVNMVHDKVAVLQKTPFDTTSEDQVAQLEALWSSLQPSVRRESPGGWGVLGFQNGDRPETDFRGMGLLGLVQLVFFSQTRNAEARQILADSTNPKRYFPFAAAGINVTAFTKVMLEQRRLDTHIYEAIVKHMPAGKLPEDQEMLVSAGFTAFNVIYGDEYVEFSRFWHVSDPSSTFAFPGIFGTIKHRAFSRFPSLLE 1138
            AKK R+ VRA  + ++R  + ++R++T +SE+GRIL+S +G+++ELV+ IA SI RSS       K AV G   FDV      L   K I D+ KPRL WCLQ+ NIVN++H+KV  LQ T +D      VA LE LW+SLQP  RR    GW  LGFQNGD+PETDFRGMGLLGL QLVFF++ RN EA  ILADS NPKRYFPFAAAGIN+TAFT  MLEQRRLDT +YEAIVKHMPAG LP D+EMLV+AG T FN +YGDEYVEFSRFWH S+P ST AFPGIFGTIK R+ +R+P L++
Sbjct:    4 AKKSRRAVRAFTRLMRRIVKWLLRKLTAQSEIGRILRS-DGHSSELVQVIAQSIGRSSSTEMERVKRAVLGKAPFDVTSTCDELMAAKAIGDEHKPRLTWCLQVLNIVNIIHEKVESLQHTNYDPDDATHVALLETLWTSLQPDARRTD--GWAPLGFQNGDKPETDFRGMGLLGLHQLVFFAEARNREALCILADSINPKRYFPFAAAGINITAFTTTMLEQRRLDTSLYEAIVKHMPAGTLPVDEEMLVAAGLTGFNHVYGDEYVEFSRFWHESEPDSTMAFPGIFGTIKQRSNARYPPLVD 304
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BLAST of mRNA_P-fluviatile_contig22.5009.1 vs. uniprot
Match: D7FIA1_ECTSI (Similar to ELMO domain-containing protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIA1_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 2.340e-48
Identity = 97/175 (55.43%), Postives = 121/175 (69.14%), Query Frame = 2 
Query:  245 AKKGRKIVRAVMKALQRAWRAVMRRVTGRSELGRILKSNEGYTNELVRAIALSIARSSEKE------AVFGHKIFDVNLVSTHLAQMKGISDQDKPRLDWCLQIFNIVNMVHDKVAVLQKTPFDTTSEDQVAQLEALWSSLQPSVRRESPGGWGVLGFQNGDRPETDFRGMGLLG 751
            AKKGRK VRA  + ++R  + ++R++T +SE+GRIL+S +GY++ELV+AIA SIARSS  E      AVFG   FDV      L   K I D+ KPRL WCLQ+ NIVN++H+KV  LQ T +D      VA LE LW+SLQP  RR +  GW  LGFQNGD+PETDFRGMGLLG
Sbjct:    4 AKKGRKAVRAFTRLMRRIVKWLLRKLTAQSEIGRILRS-DGYSSELVQAIAQSIARSSSSEMERVKRAVFGKAPFDVTSTCDELMAAKAIGDEHKPRLTWCLQVLNIVNIIHEKVESLQHTNYDPDEPTHVALLETLWTSLQPDARRTN--GWAPLGFQNGDKPETDFRGMGLLG 175
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BLAST of mRNA_P-fluviatile_contig22.5009.1 vs. uniprot
Match: D7FIA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIA0_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 1.390e-34
Identity = 62/85 (72.94%), Postives = 72/85 (84.71%), Query Frame = 2 
Query:  884 MLEQRRLDTHIYEAIVKHMPAGKLPEDQEMLVSAGFTAFNVIYGDEYVEFSRFWHVSDPSSTFAFPGIFGTIKHRAFSRFPSLLE 1138
            MLEQRRLDT +YEA+VKHMP G LP D+EMLV+AG T FN +YGDEYVEFSRFWH S+P ST AFPGIFGTIK R+ +RFP L++
Sbjct:    1 MLEQRRLDTSLYEAVVKHMPEGTLPVDEEMLVAAGLTGFNHVYGDEYVEFSRFWHESEPDSTMAFPGIFGTIKQRSNARFPPLVD 85
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BLAST of mRNA_P-fluviatile_contig22.5009.1 vs. uniprot
Match: A0A024G872_9STRA (ELMO domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G872_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.410e-32
Identity = 97/301 (32.23%), Postives = 150/301 (49.83%), Query Frame = 2 
Query:  254 GRKIVRAVMKALQ---RAWRAVMRRVT----GRSELGRILKSNEGYTNELVRA-----IALSIARSSEKEAVFGHKIFDVNLVSTHLAQMKGISDQD---KPRLDWCLQIFNIVNMVHDKVAVLQKTPFDTTSEDQVAQLEALWSSLQPSVRRES---PGGWGVLGFQNGDRPETDFRGMGLLGLVQLVFFSQTRNAEARQILADSTNPKRYFPFAAAGINVTAFTKVMLEQRRLDTHIYEAIVKHMPAGKLPEDQEMLVSAGFTAFNVIYGDEYVEFSRFWHVSDPSSTFAFPGIFGTIK 1102
            GR++   V K L    R WR + ++V     G+SEL R+ +  E     +  A     +ALS    ++ + VF  + F+V  V   +A   GI   D      L   L   N VN V+ K+  L+   + + +E     LE LW++L+P  RR        WG +GFQ  D P TDFRGMG+L L+QL++F+     EA  +L +S +P  ++PF+  GINVTAF   ++++R +D  IY+      P+       +  +  G  A +  Y D +  F++ W  S+P    AFP +F T+K
Sbjct:    3 GRQVRSNVAKQLSLIDRLWRYLHKQVCKWIFGQSELQRLARKCESLDLNVQMARFRSCLALSKHLMAQCDRVFDPRTFEVEQVCEEIAVADGIDTNDIRLMQTLRGWLHRCNYVNAVYQKLFSLRDESYTSQNEMHERMLEELWTNLKPQTRRAHGRITKEWGEIGFQGVD-PMTDFRGMGILSLIQLLYFTSKYPVEASALLTESNHPTHWYPFSVTGINVTAFVIELVQERLVDMKIYQYAETSDPS-------KHGIDNGLDAMHEFYCDVFTSFNKLWKESNPEDAMAFPSVFQTLK 295
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BLAST of mRNA_P-fluviatile_contig22.5009.1 vs. uniprot
Match: F0WBU8_9STRA (Uncharacterized protein AlNc14C53G4139 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBU8_9STRA)

HSP 1 Score: 131 bits (330), Expect = 2.140e-30
Identity = 91/291 (31.27%), Postives = 149/291 (51.20%), Query Frame = 2 
Query:  278 MKALQRAWRAV----MRRVTGRSELGRILKSNEGYTNELVRA-----IALSIARSSEKEAVFGHKIFDVNLVSTHLAQMKGISDQDKPRLDWCLQIF----NIVNMVHDKVAVLQKTPFDTTSEDQVAQLEALWSSLQPSVRRES---PGGWGVLGFQNGDRPETDFRGMGLLGLVQLVFFSQTRNAEARQILADSTNPKRYFPFAAAGINVTAFTKVMLEQRRLDTHIYEAIVKHMPAGKLPEDQEMLVSAGFTAFNVIYGDEYVEFSRFWHVSDPSSTFAFPGIFGTIK 1102
            M  + R WR +     R + G SEL R+ +  +     +  A     +ALS   +++ + +F  K   V+ VS  +A   GI D++  RL   L+ +    + VN V+ K+  L+  P+ + ++     LE LW++L+P  RR        W  +GFQ  D P TDFRGMG+L LVQL++F+     EA+ +L +S +P  ++PF+  GINVTAF   ++++R +D  IY+          + +    ++  G  A +  Y D +  F++ W  S+P    AFP IF  +K
Sbjct:   14 MTFIDRFWRYLHEQFWRWILGESELQRLARKCDVLDLSVQMARFRSCLALSEHLTAQCDQIFDLKTLKVDQVSEEIAVADGI-DKNNIRLMQTLRGWLHRCDYVNSVYQKLLALRDEPYASHNKVHERMLEELWTNLKPQTRRAHGRITKEWSEIGFQGMD-PMTDFRGMGVLSLVQLLYFTSKYPVEAQALLTESNHPTHWYPFSVTGINVTAFVIELVQERLVDIKIYQY-------ADISDPSRDVMDNGLDAIHEFYCDVFTSFNKLWKESNPEDAMAFPSIFQALK 295
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BLAST of mRNA_P-fluviatile_contig22.5009.1 vs. uniprot
Match: A0A0P1ACK8_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACK8_PLAHL)

HSP 1 Score: 137 bits (346), Expect = 3.850e-30
Identity = 92/262 (35.11%), Postives = 134/262 (51.15%), Query Frame = 2 
Query:  392 IALSIARSSEKEAVFGHKIFDVNLVSTHLAQMKGISDQDKP---RLDWCLQIFNIVNMVHDKVAVLQKTPFDTTSEDQVAQLEALWSSLQPSVRRESPGG-----WGVLGFQNGDRPETDFRGMGLLGLVQLVFFSQTRNAEARQILADSTNPKRYFPFAAAGINVTAFTKVMLEQRRLDTHIYEAIVKHMPAGKLPEDQEMLVSAGFTAFNVIYGDEYVEFSRFWHVSDPSSTFAFPGIFGTIK--------HRAFSRFPS 1129
            +ALS        AVF ++ F V      +A    +   D      +  CLQ  N VN ++D+V  L+   + +++ +    LE LWS+L+P VRR   GG     WG +GFQ  D P +DFRGMG+L LVQL  F++T   E+++ L +S +P R++PFA  GINVTAF   +++ R LD  IY      +  G   ED    V AG    +  Y   +  F++ W  S+P    AFP IF ++K        HR+F   P+
Sbjct:   63 LALSKRMVQTCNAVFDNEPFPVEKTLHDVATRASLDKSDTTLMANVRSCLQRCNFVNRIYDQVYALKNEAYSSSNSEHEELLEQLWSNLKPDVRRL--GGRITKEWGEIGFQGTD-PMSDFRGMGILSLVQLNHFTKTYKIESQRALEESNHPTRWYPFAVTGINVTAFVVELIDNRLLDVEIYR-----LSTGG--EDDN--VDAGIQQLHDFYATTFTRFNKLWVDSNPRDVMAFPSIFQSLKDAICRELTHRSFRERPA 312
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BLAST of mRNA_P-fluviatile_contig22.5009.1 vs. uniprot
Match: K3X4G9_GLOUD (ELMO domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4G9_GLOUD)

HSP 1 Score: 131 bits (330), Expect = 2.420e-29
Identity = 91/290 (31.38%), Postives = 147/290 (50.69%), Query Frame = 2 
Query:  287 LQRAWR----AVMRRVTGRSELGRILKSNEGYTNELVR------AIALSIARSSEKEAVFGHKIFDVNLVSTHLAQMKGISDQDKP---RLDWCLQIFNIVNMVHDKVAVLQKTPFDTTSEDQVAQLEALWSSLQPSVRRESPGG-----WGVLGFQNGDRPETDFRGMGLLGLVQLVFFSQTRNAEARQILADSTNPKRYFPFAAAGINVTAFTKVMLEQRRLDTHIYEAIVKHMPAGKLPEDQEMLVSAGFTAFNVIYGDEYVEFSRFWHVSDPSSTFAFPGIFGTIK 1102
            ++R WR    A+ + + G+SE+ RI        +E  R      ++ALS A      AVF  + F +  + T + +   +  ++      +  CL   N VN V+++V  L+   FD+ +      LE LWS+L+P+VRR   GG     WG +GFQ  D P +DFRGMG+  L QL+ F+     EA+  LA+S +P R++PF+  GIN+T+F   ++ +R +D  +Y+    ++  G      E     G  A + +Y   +  F++ W  S+P    AFP IF  +K
Sbjct:   18 VRRIWRWVKNALWQVLFGQSEVQRICTPTGNQVDEQSRIVRFRTSLALSNALVKICNAVFDFEAFPMEAILTEMIKRLSLDAKNTSLIANVRGCLDRCNYVNRVYNRVHALRDEAFDSKNAKHEEMLEQLWSNLKPNVRRS--GGRITKEWGEIGFQGTD-PMSDFRGMGIFSLYQLLHFTGNYPVEAQAALAESNHPTRWYPFSVTGINITSFIIELINERLVDFKLYK--FANLQRGTNDSSNE---DDGLEALHELYSTIFTRFNKLWVDSNPRDVMAFPTIFNALK 299
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BLAST of mRNA_P-fluviatile_contig22.5009.1 vs. uniprot
Match: A0A5D6XTB3_9STRA (ELMO domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTB3_9STRA)

HSP 1 Score: 134 bits (337), Expect = 5.760e-29
Identity = 94/280 (33.57%), Postives = 136/280 (48.57%), Query Frame = 2 
Query:  305 AVMRRVTGRSELGRILKSNEGYTNELVR------AIALSIARSSEKEAVFGHKIFDVNLVSTHLAQMKGISDQDKPRLDW---CLQIFNIVNMVHDKVAVLQKTPFDTTSEDQVAQLEALWSSLQPSVRRESPGG-----WGVLGFQNGDRPETDFRGMGLLGLVQLVFFSQTRNAEARQILADSTNPKRYFPFAAAGINVTAFTKVMLEQRRLDTHIYEAIVKHMPAGKLPEDQEMLVSAGFTAFNVIYGDEYVEFSRFWHVSDPSSTFAFPGIFGTIK 1102
            A  R V  +SE  RI     G  +E  R      ++AL  A  S   AVF  + F V+   + +     ++ QD   +     CL   N VN V+ +   L+   + +  +   A LE LW +L+P+VRR   GG     WG +GFQ  D P++DFRGMG+L L QLV FS     EA   LA+S +P R++PF+  GIN+T F   ++ +R +D  +Y       PA       E     G  A + +Y   +  F++ W  S+P    AFP IF T+K
Sbjct:  506 AARRVVFHQSEWQRICGPASGAVDEAERMARFRTSLALDRALVSTCNAVFDFEEFPVDATLSAMVTKAALNPQDSTLMAGVRACLHRCNFVNRVYARTHQLRDEAYSSVDDRHEALLEQLWDNLKPNVRRS--GGRITKEWGEIGFQGTD-PKSDFRGMGILSLQQLVHFSVKYPVEAHAALAESNHPTRWYPFSVTGINITGFMIELINERLVDVKLYALANAQDPAAA----HEQATEQGVAALHELYCTLFTRFNKLWVDSNPRDVMAFPTIFQTLK 778
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BLAST of mRNA_P-fluviatile_contig22.5009.1 vs. uniprot
Match: A0A8J5J2E0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J2E0_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.050e-28
Identity = 81/245 (33.06%), Postives = 128/245 (52.24%), Query Frame = 2 
Query:  392 IALSIARSSEKEAVFGHKIFDVNLVSTHLAQMKGISDQDKPRLD---WCLQIFNIVNMVHDKVAVLQKTPFDTTSEDQVAQLEALWSSLQPSVRRESPGG-----WGVLGFQNGDRPETDFRGMGLLGLVQLVFFSQTRNAEARQILADSTNPKRYFPFAAAGINVTAFTKVMLEQRRLDTHIYEAIVKHMPAGKLPEDQEMLVSAGFTAFNVIYGDEYVEFSRFWHVSDPSSTFAFPGIFGTIK 1102
            +ALS         VF ++ F ++     +A    + ++D   +     CLQ  N VN V+ +V  L+   + ++  +    LE LW++L+P VRRE  GG     WG +GFQ  D P +DFRGMGL  LVQL+ F++    EA++ L +S +P R++PFA  GINVTAF   ++++R LD  +Y             +D    V +G    + +Y   +  F++ W  ++P    AFP IF ++K
Sbjct:   63 LALSAQMVQACNVVFDNEPFPMDATLHDVATRAKLDERDATLMTNVRSCLQRCNFVNKVYARVYALKNEAYSSSKPEHEELLEQLWTNLKPDVRRE--GGRITKEWGEIGFQGTD-PMSDFRGMGLFSLVQLIHFAKGYKIEAQRALEESNHPTRWYPFAVTGINVTAFMIELIDERLLDIKLYRHAAN--------DD----VDSGLKQLHDVYATIFTRFNKLWVDTNPRDVMAFPSIFQSLK 292
[Close]
BLAST of mRNA_P-fluviatile_contig22.5009.1 vs. uniprot
Match: A0A482SNR3_9ARCH (ELMO domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNR3_9ARCH)

HSP 1 Score: 124 bits (311), Expect = 7.780e-28
Identity = 92/295 (31.19%), Postives = 142/295 (48.14%), Query Frame = 2 
Query:  299 WRAVMRRVTGRSELGRILKSNE-----GYTNELVRAIALSIARSSEKEAVFGHKIFDVNLVSTHLAQMKGISDQDK---PRLDWCLQIFNIVNMVHDKVAVLQKTPFDTTSEDQVAQLEALWSSLQPSVRRESPGG-----WGVLGFQNGDRPETDFRGMGLLGLVQLVFFSQTRNAEARQILADSTNPKRYFPFAAAGINVTAFTKVMLEQRRLDTHIYEAIVK---HMPAGKLPED-QEMLVSAGFTAFNVIYGDEYVEFSRFWHVSDPSSTFAFPGIFGTIKHRAFSRFPSL 1132
            W+ V+   TG+ E+ RI  + +       T E  R++  S       + VF  +   ++  +T + Q KGIS ++      +  CLQ  +++NM    +  L+ T +     + VA LE+LW +L+P V R+  GG     WG +GFQ  D P TDFRGMGLLGL+QLV+FS+     A  +L+ S    +YFP+AA GINVTA    M        +I E I K   H  +  +  +  +  + A     +  Y   ++   + W  S+     AFP +F   K    + +P L
Sbjct:   18 WKYVVHLWTGKCEIQRICGNKDRMHSASMTEEFARSLKKSRQLVKYSKIVFRWEAVPIHSFTTGIMQAKGISIENSLLLANIRTCLQHVHMINMAIQHLQKLKSTIYSDNDPEHVALLESLWRNLKPHVTRQ--GGRITAEWGEVGFQGRD-PATDFRGMGLLGLIQLVYFSEKMPELAISLLSQSQYDHQYFPYAATGINVTAVVVDMTLLGCFHHNILEEIDKIILHDSSQNIEREVDQKTIQAILNIIHAKYCVLFLRLGKTWLDSNSKDLMAFPKVFKGFKEDVLALYPKL 309
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.5009.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JID1_9PHAE1.960e-11761.51ELMO domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FIA1_ECTSI2.340e-4855.43Similar to ELMO domain-containing protein 1 n=1 Ta... [more]
D7FIA0_ECTSI1.390e-3472.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A024G872_9STRA1.410e-3232.23ELMO domain-containing protein n=1 Tax=Albugo cand... [more]
F0WBU8_9STRA2.140e-3031.27Uncharacterized protein AlNc14C53G4139 n=1 Tax=Alb... [more]
A0A0P1ACK8_PLAHL3.850e-3035.11Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
K3X4G9_GLOUD2.420e-2931.38ELMO domain-containing protein n=1 Tax=Globisporan... [more]
A0A5D6XTB3_9STRA5.760e-2933.57ELMO domain-containing protein n=1 Tax=Pythium bra... [more]
A0A8J5J2E0_9STRA1.050e-2833.06Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A482SNR3_9ARCH7.780e-2831.19ELMO domain-containing protein n=1 Tax=archaeon Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig22contigP-fluviatile_contig22:2253389..2258466 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score177.2
Seed ortholog evalue1.2e-41
Seed eggNOG ortholog2880.D7FIA1
Preferred nameELMOD1
KEGG koko:K14821
GOsGO:0000278,GO:0000281,GO:0000910,GO:0002682,GO:0002697,GO:0002831,GO:0003674,GO:0005096,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0007049,GO:0008047,GO:0008150,GO:0009987,GO:0022402,GO:0022603,GO:0030234,GO:0030695,GO:0031347,GO:0031974,GO:0031981,GO:0032101,GO:0032991,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043547,GO:0043900,GO:0044093,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0048583,GO:0050688,GO:0050789,GO:0050790,GO:0050793,GO:0051239,GO:0051301,GO:0051336,GO:0051345,GO:0060589,GO:0061640,GO:0065007,GO:0065009,GO:0070013,GO:0080134,GO:0090175,GO:0098772,GO:1903047,GO:1905330,GO:2000026,GO:2000027
EggNOG free text desc.ELMO domain-containing protein
EggNOG OGsKOG2998@1,KOG2998@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionsimilar to ELMO domain-containing protein 1
Ec32 orthologEc-11_001130.1
Exons5
Model size1886
Cds size921
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815988.1298685-UTR-P-fluviatile_contig22:2253388..22536141622815988.1298685-UTR-P-fluviatile_contig22:2253388..2253614Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 2253389..2253614 +
1693563952.4709287-UTR-P-fluviatile_contig22:2253388..22536141693563952.4709287-UTR-P-fluviatile_contig22:2253388..2253614Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 2253389..2253614 +
1622815988.20497-UTR-P-fluviatile_contig22:2257727..22584661622815988.20497-UTR-P-fluviatile_contig22:2257727..2258466Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 2257728..2258466 +
1693563952.5355763-UTR-P-fluviatile_contig22:2257727..22584661693563952.5355763-UTR-P-fluviatile_contig22:2257727..2258466Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 2257728..2258466 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815988.140391-CDS-P-fluviatile_contig22:2253614..22539231622815988.140391-CDS-P-fluviatile_contig22:2253614..2253923Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 2253615..2253923 +
1693563952.4816144-CDS-P-fluviatile_contig22:2253614..22539231693563952.4816144-CDS-P-fluviatile_contig22:2253614..2253923Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 2253615..2253923 +
1622815988.1507797-CDS-P-fluviatile_contig22:2255442..22556561622815988.1507797-CDS-P-fluviatile_contig22:2255442..2255656Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 2255443..2255656 +
1693563952.490019-CDS-P-fluviatile_contig22:2255442..22556561693563952.490019-CDS-P-fluviatile_contig22:2255442..2255656Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 2255443..2255656 +
1622815988.1618414-CDS-P-fluviatile_contig22:2256519..22566241622815988.1618414-CDS-P-fluviatile_contig22:2256519..2256624Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 2256520..2256624 +
1693563952.4983425-CDS-P-fluviatile_contig22:2256519..22566241693563952.4983425-CDS-P-fluviatile_contig22:2256519..2256624Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 2256520..2256624 +
1622815988.1785035-CDS-P-fluviatile_contig22:2256846..22570051622815988.1785035-CDS-P-fluviatile_contig22:2256846..2257005Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 2256847..2257005 +
1693563952.5095844-CDS-P-fluviatile_contig22:2256846..22570051693563952.5095844-CDS-P-fluviatile_contig22:2256846..2257005Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 2256847..2257005 +
1622815988.1922565-CDS-P-fluviatile_contig22:2257593..22577271622815988.1922565-CDS-P-fluviatile_contig22:2257593..2257727Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 2257594..2257727 +
1693563952.5257244-CDS-P-fluviatile_contig22:2257593..22577271693563952.5257244-CDS-P-fluviatile_contig22:2257593..2257727Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 2257594..2257727 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig22.5009.1prot_P-fluviatile_contig22.5009.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig22 2253615..2257727 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig22.5009.1

>prot_P-fluviatile_contig22.5009.1 ID=prot_P-fluviatile_contig22.5009.1|Name=mRNA_P-fluviatile_contig22.5009.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=307bp
MPLQTNAKKGRKIVRAVMKALQRAWRAVMRRVTGRSELGRILKSNEGYTN
ELVRAIALSIARSSEKEAVFGHKIFDVNLVSTHLAQMKGISDQDKPRLDW
CLQIFNIVNMVHDKVAVLQKTPFDTTSEDQVAQLEALWSSLQPSVRRESP
GGWGVLGFQNGDRPETDFRGMGLLGLVQLVFFSQTRNAEARQILADSTNP
KRYFPFAAAGINVTAFTKVMLEQRRLDTHIYEAIVKHMPAGKLPEDQEML
VSAGFTAFNVIYGDEYVEFSRFWHVSDPSSTFAFPGIFGTIKHRAFSRFP
SLLEDV*
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mRNA from alignment at P-fluviatile_contig22:2253389..2258466+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig22.5009.1 ID=mRNA_P-fluviatile_contig22.5009.1|Name=mRNA_P-fluviatile_contig22.5009.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5078bp|location=Sequence derived from alignment at P-fluviatile_contig22:2253389..2258466+ (Porterinema fluviatile SAG_2381)
AGTGCGAGAGGGAGAGAGAGAGCAAACGACAAAGCAAAAAATTGTACCCG
CCGGAGGCACCGTCAATACCGTGGATACCATGAAAGGGGGGCAAAAATCA
GAACCCGTTTCCACGAACACGCCCTTCGCAGCTTTACTCGTGGTTTGACG
CGAAGAACGGGCTGACTCTACACCCTTGGCCGTGTTCTCCCTCGAGACGA
CACATCGAGGCAACAGGAACACGTGGATGCCGCTACAAACCAATGCCAAG
AAGGGCAGAAAAATTGTTCGGGCGGTCATGAAGGCATTGCAACGCGCTTG
GAGGGCCGTAATGCGTCGAGTGACAGGCCGTTCGGAGCTTGGACGGATAC
TCAAGAGCAACGAGGGATACACGAATGAACTTGTGAGGGCGATCGCTCTC
TCGATTGCGAGAAGCTCGGAGAAAGAAGCCGTGTTCGGCCACAAAATATT
TGATGTCAATCTTGTCTCCACGCACCTGGCTCAGATGAAAGGTATCTCCG
ACCAGGATAAGCCACGCCTCGATTGGTGCTTGCAGGTGAGGAGTGCTGTA
TTGTGTGCGTGTCTAGTATATACTGGCCTCTCTTATATTCGCGTTTTGTT
GCACAAGCACAGACCCCTTCGCTTTTCAAGTTCTTGCGCGTCTTGTTGTC
GAGGTTTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCGTTTGCTCTCTCTCTTGCTCTCTC
TCTCTCCCTCGTTCCTCACGCGCACGCCCCTTTGTTTATCGGAATCCCGC
CCTGTTTCGACAAGTGTGAAAATATAAGGCCAATAACTGGTGTTTCACTC
ACGAGAGCGATCGATCCGTAAGGCTGGCTTGGATTTTGCGTGGATTATTT
CCTTTCGAAAACTTTGTGAAAGATACTTGTGTACCAAGCACCGAGGGCTT
GGGTCACACCTGGAGTGTGGACTGGAACAACGAGGTGGACAGTTGCGGCA
GGTGGCGCCTTGTCCATCACCAGACCATCACAAAGGAGAAGCTCATTGCC
ATGTTTTTCGTGGCGAAATGAGAAGTCTTCCCTATGCGGCGGGTGGAACG
CGCTGAATACGCAATCCATGCCGCGATGTAGGATGCCGGCAAGTAACAGC
ATGATAAACTTTGCAGCTGAACCAGTACTCGGTGTGGGAAGGAAATGCGT
CAAATGATTTGGTTTCGATGAAAAGAGGAAAAGAAGAGGGCTACGCAGCA
CGAGGCTTGATAATACCACTCTTATCCTGGCACACCTGCCCATACACTCT
TCCGCGTACTCCCGACAATACACCCGAGCTTAGGTGCGCTGAGGTGGGTC
GCTCTTCCTGCATGTTTGCTTGTCCTCTTCGCCGAGGCTAGTGCATCCGC
TATTGCTCGCTACTTCTGTGACAGCAAAGTCAACTACTACCGTGCGTTTC
AGAGCTCTTACTGCTGTCGGCAGTGTAGGAATGAAATGGGGCGACATTAG
TGACGTAGGCGCGAACGGGAAGCACACCGATTGGTTGTAGAGGATGCAAT
TTTTCCAGCAACTTGGAAGCTCTAGGTTTCTGAATCCGCACGGTGCCTCA
ACATGTGGGCTGAGAATGTTTTTGTGGCATGCATGAATGATCGAACGAAC
AACCAACCCTTAAGGAATATCAAATCGGACCTGTAGAAAAGATGGCACGC
ATGGACTTGCGGTGCATATGTGAGGGGGGGAATCATGTTCGAATGAATCA
TATTTGTTCGACGAGCAGAAACAATGACTCTGAAAAGTCGTTCAAATTTG
TCAAACTTTTGCAAAAGTCTCTGCCGCAGGCGTCTTTAAAAAGGGATGCA
ATGATGGTAGAGCGAGATAGAGATGGCGGGTTAAGAGACCCGACGATAGT
GGCACAAGTGGGAAGCACGCAGCACAGGCGCTTCATTCCTCGAAATTTAT
TTGCGATGAACGACAAAAATGGTCTCTGGAATAGTGTTGCGACCACTGCC
TTCCTTTCCTGACTTTAAGTTTCTGCTTTATGTTTTCCCACTGTGGTTGC
ACAGATTTTCAACATTGTCAACATGGTCCATGACAAAGTTGCTGTCCTGC
AAAAGACGCCGTTCGACACTACGTCAGAAGATCAAGTCGCTCAGCTCGAG
GCGCTATGGTCCTCTCTGCAACCGTCCGTCCGACGCGAAAGCCCAGGAGG
TTGGGGAGTTCTCGGATTCCAAAACGGAGATCGTCCAGAAACGGACTTCC
GCGGCATGGGACTCCTTGGTGAGATGTTTTTTACGAGCGAGATTCTCATC
TGCGATGGAGCCAAAAAAAGGAGTTGGTAGTTAAGAAAAAAGACCCGGAA
AAGTGTACGGTATCCATCTGCGGCGGATGAAAATATGAACCACACACACA
CACACGTGCGCGCACGCCATCTACACTTGGAGAAATAAAAAGCAGAGCCT
CGCCATTTCAGTTGTGCAGCAGCCGAAGAAAACCGTATGCAAGGGGAGAA
CAGATTTCTCAAGTGGTCGACCAAAGGTCCAACTTCGTACTCTCATCTCG
TGCATTGTCCATCCAGGGAATGCTGTGGAGCGATGTCTTATTTATTGAAT
ATGGTTGTTATCCGGGTCACTTGTGTCGTATTGGTCAGTCCTGGCCGAGT
GACGAGCGCGACCTATTGGGAGTTGTAGCTTAATTTTGTCGTGATGTTTC
ATTGTTTTCATATGATGGCGCAAATCGCAGCGTTTCTCTCCTGAATCGAC
GGTGGTCCTGTCTTGAATCCGTTCATTCGTCCCATGTGCACAGATTTAGA
CGGCGGAGCAGCGTAGATGTTGTGGATTTGTGGACCAGCTCTGCACTGCC
TGAACACAAGAAATAATTTACCTTGAAGGCAGATGTCGCGGAGGAGACCT
GTGAAGATTGTGCCTTCGTGTTCTCGTGCTTCTTTTATGTTGCACCATTA
GTTTTCAACTGCAGTATTAATAGTTTCGCACGATCAGTGTGCCAGCTGTA
ATGAACGCAACAGATCACTGCAGTTTTCAAAAGTGTATTCCAACCAGTAG
TGGCAGTTTTCATATGCATGAGTATCGGGAGCGTGTCTGCCTCTGATGCT
GGTCGACTAACCTTTTGTGTGCGTGTCGCAGGTTTGGTGCAGCTCGTTTT
CTTCTCTCAAACACGAAATGCCGAAGCCCGGCAAATCTTGGCTGATTCGA
CCAACCCGAAGCGATACTTCCCTTTCGCGGCCGCAGGTGGGGTCATCTCT
CCTTGTCTCATTGCACGTGTTCTAATGCTTTTCAGAGCTCGAACTTTAGT
ACCACAGAATGGGCATGATCATCTTTCTGATCGGCTGGCTTTTTGCAAAG
TGCCAGCAGCATTAATTCAAATGGCATTGCCTTGATTCCGTGTTGAGTTT
TGTTTAGTATCTCCAAGTCGTCACTCACACAGACTACGACGTGTTTTGCT
GCTGTAAGGTATTAACGTAACAGCATTCACGAAAGTCATGCTTGAGCAAC
GGCGCCTGGATACCCATATCTACGAAGCCATTGTGAAGCACATGCCCGCG
GGCAAGCTACCGGAGGATCAGGAAATGCTCGTATCCGCTGGGTTCACTGC
TTTCAACGTCATATATGGTGAGAGCTAGCTTGTGGACACCATTGGCGATT
CAGTCGGATGATAGGTCTGATTGTTCGCCTTACATGACGGAGTACGACTC
CCGGTCATGCACATACTCCGAGTATATACAAAGATCACTTGGTTGGATTG
GACTTCATGGGGGCGTGTAGGGTGTACCCACGATCATGAAGCCGTAGACT
TGTCACCCCGGATCTCATGTGCAGCATCAAAAGTACAAACACAGAGTAGG
CGATGAAGATCCGGAATGCTCACATATCGTGTGGTCATCGGGGGGGAAGA
TGTGATAAGTAGAGGGCATTATGGGTGGCTGGCTTGGAGGAGGGCGTAAC
GGTCATAAAAAACCTCGGCAGGCCAATGTGTTATCTTAGAAAATATTTGA
GGCGCCCCTACCCACAGGTGCTGCTTGTTTCATATCCCCCCAAAAATTAA
AGGGCGAAGAGTGGCTTGGTTGTTGTCTCGAGCACAAATTGGAAGAAAGA
CCACACTAGTTAGCCTCTCGTAAGTCGAATACGGCAAACGAAGGACCGGC
TGTCCTGATTTCTGTCCTTGGTTTCATATCCACGCTCCGTTTGCCTGGAA
CTCAGGTGATGAGTACGTGGAATTCTCCCGATTTTGGCACGTTTCCGACC
CGAGCAGCACGTTCGCCTTCCCTGGGATCTTCGGGACCATCAAGCATCGG
GCGTTCTCAAGGTTCCCCTCACTTTTAGAGGATGTTTAAGGTGTAGGCAT
CAACAATGTCCGCGTTGCAGATTGCGGCTGTTTTACAAGTTGCATGTTTG
TGTGGAGTGTTGGTTGTCGTGTAATTTTTGGAGGCCTGAATTCACTGGCG
GTACCCTTTGCTATATCGTCGTACCAGTATTGTATTTCGCCGTATCTTGC
TGCTATGCAGACATAGTGTTCAACTCCTATCAGTTTTTTTTTTGCGGCGC
AGTAGGACCACCTGTCATCCGAAAATGTAGTCTCCACGTTTCGCTCCGCA
TTTGGCGGGAAAGGCGAGAACGCTCGTGCACAAAGTCGACTTTCCATTTT
TTTGCCCCAGGATTCTTGGGGCGGTTCCCACAGAACGTGGATTATGAAGG
CGGTTGTTGAAAGGGCGAGGTGTACAAATGTCACATCACTTCTCTTTTTG
TTAAAAAATTGTATTTTCATTTTCGCGGGTAAGCGGCATATGTTGATTCA
TTAGATTCGGTTGTTTTTGCGGAAAGCCTGTCATCAAAGCACGAGTGAAG
GGACACGTTTGTAGTTCGATAGTGTCTTTATGTGTTTGCATTCCTTGATG
TAGGAACCGGTGGAACGATTATAGCTCTTGAATGTGTAAGCCGCCGGGGG
AGCTGCTGCTGCGCAAGGTGGTATGGAAGGTGGGCTGGCATTTGCCGTCC
TTGATGATAGTAAAAAGAGGGGTACACAGAGCCATATACAGCGGTGCTGG
GCTATCGTACAACGAAAGCATCAGGCAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig22:2253389..2258466+

>mRNA_P-fluviatile_contig22.5009.1 ID=mRNA_P-fluviatile_contig22.5009.1|Name=mRNA_P-fluviatile_contig22.5009.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1842bp|location=Sequence derived from alignment at P-fluviatile_contig22:2253389..2258466+ (Porterinema fluviatile SAG_2381)
ATGCCGCTACAAACCAATGCCAAGAAGGGCAGAAAAATTGTTCGGGCGGT
CATGAAGGCATTGCAACGCGCTTGGAGGGCCGTAATGCGTCGAGTGACAG
GCCGTTCGGAGCTTGGACGGATACTCAAGAGCAACGAGGGATACACGAAT
GAACTTGTGAGGGCGATCGCTCTCTCGATTGCGAGAAGCTCGGAGAAAGA
AGCCGTGTTCGGCCACAAAATATTTGATGTCAATCTTGTCTCCACGCACC
TGGCTCAGATGAAAGGTATCTCCGACCAGGATAAGCCACGCCTCGATTGG
TGCTTGCAGATGCCGCTACAAACCAATGCCAAGAAGGGCAGAAAAATTGT
TCGGGCGGTCATGAAGGCATTGCAACGCGCTTGGAGGGCCGTAATGCGTC
GAGTGACAGGCCGTTCGGAGCTTGGACGGATACTCAAGAGCAACGAGGGA
TACACGAATGAACTTGTGAGGGCGATCGCTCTCTCGATTGCGAGAAGCTC
GGAGAAAGAAGCCGTGTTCGGCCACAAAATATTTGATGTCAATCTTGTCT
CCACGCACCTGGCTCAGATGAAAGGTATCTCCGACCAGGATAAGCCACGC
CTCGATTGGTGCTTGCAGATTTTCAACATTGTCAACATGGTCCATGACAA
AGTTGCTGTCCTGCAAAAGACGCCGTTCGACACTACGTCAGAAGATCAAG
TCGCTCAGCTCGAGGCGCTATGGTCCTCTCTGCAACCGTCCGTCCGACGC
GAAAGCCCAGGAGGTTGGGGAGTTCTCGGATTCCAAAACGGAGATCGTCC
AGAAACGGACTTCCGCGGCATGGGACTCCTTGATTTTCAACATTGTCAAC
ATGGTCCATGACAAAGTTGCTGTCCTGCAAAAGACGCCGTTCGACACTAC
GTCAGAAGATCAAGTCGCTCAGCTCGAGGCGCTATGGTCCTCTCTGCAAC
CGTCCGTCCGACGCGAAAGCCCAGGAGGTTGGGGAGTTCTCGGATTCCAA
AACGGAGATCGTCCAGAAACGGACTTCCGCGGCATGGGACTCCTTGGTTT
GGTGCAGCTCGTTTTCTTCTCTCAAACACGAAATGCCGAAGCCCGGCAAA
TCTTGGCTGATTCGACCAACCCGAAGCGATACTTCCCTTTCGCGGCCGCA
GGTTTGGTGCAGCTCGTTTTCTTCTCTCAAACACGAAATGCCGAAGCCCG
GCAAATCTTGGCTGATTCGACCAACCCGAAGCGATACTTCCCTTTCGCGG
CCGCAGGTATTAACGTAACAGCATTCACGAAAGTCATGCTTGAGCAACGG
CGCCTGGATACCCATATCTACGAAGCCATTGTGAAGCACATGCCCGCGGG
CAAGCTACCGGAGGATCAGGAAATGCTCGTATCCGCTGGGTTCACTGCTT
TCAACGTCATATATGGTATTAACGTAACAGCATTCACGAAAGTCATGCTT
GAGCAACGGCGCCTGGATACCCATATCTACGAAGCCATTGTGAAGCACAT
GCCCGCGGGCAAGCTACCGGAGGATCAGGAAATGCTCGTATCCGCTGGGT
TCACTGCTTTCAACGTCATATATGGTGATGAGTACGTGGAATTCTCCCGA
TTTTGGCACGTTTCCGACCCGAGCAGCACGTTCGCCTTCCCTGGGATCTT
CGGGACCATCAAGCATCGGGCGTTCTCAAGGTTCCCCTCACTTTTAGAGG
ATGTTTAAGTGATGAGTACGTGGAATTCTCCCGATTTTGGCACGTTTCCG
ACCCGAGCAGCACGTTCGCCTTCCCTGGGATCTTCGGGACCATCAAGCAT
CGGGCGTTCTCAAGGTTCCCCTCACTTTTAGAGGATGTTTAA
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