mRNA_P-fluviatile_contig22.4989.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig22.4989.1 vs. uniprot
Match: D7FGW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW9_ECTSI) HSP 1 Score: 254 bits (649), Expect = 3.020e-75 Identity = 132/203 (65.02%), Postives = 150/203 (73.89%), Query Frame = 1
Query: 46 MPLDTELHKSAHKGNVQGVKDLVESGQVDVNEKGAQDRTALHRAAGANHVSIIQYLLRAGAPVDCADRCRRXXXXXXXXXXXXXXXXXXXXXXXXXXXKTMSGMNPLMCAVQQRWHSVAEAILEWSAGCIEGDE--DGQIPSPNEMCSTLDAEGKTAMMLAKENGDVPMQKLLKAYAPKMSPSTWC--GSTSKKQLSAVVVPP 642
MPLDTELHKSAHKG++Q V+ LVE+G+V+VN+KGAQDRTALHRAAGANHV II YLL+AGAPV+ ADRC R KT+SGMNPLMCAVQQRWHSVAEAILEWS GC E +E DG +PSP E+CS DAEGKTA++ AKE GDVPMQKLLK+Y PK PS WC G +K+QLSAV VPP
Sbjct: 1 MPLDTELHKSAHKGDIQSVRQLVETGEVNVNQKGAQDRTALHRAAGANHVGIIIYLLQAGAPVNTADRCLRTPLHWAAISGHLDATQLLLERGGDLRSKTVSGMNPLMCAVQQRWHSVAEAILEWSEGCTEDEEGVDGPVPSPAELCSATDAEGKTAVVFAKELGDVPMQKLLKSYIPKQ-PSAWCCGGGAAKQQLSAVAVPP 202
BLAST of mRNA_P-fluviatile_contig22.4989.1 vs. uniprot
Match: A0A6H5JFE8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE8_9PHAE) HSP 1 Score: 226 bits (576), Expect = 5.390e-62 Identity = 119/190 (62.63%), Postives = 136/190 (71.58%), Query Frame = 1
Query: 85 GNVQGVKDLVESGQVDVNEKGAQDRTALHRAAGANHVSIIQYLLRAGAPVDCADRCRRXXXXXXXXXXXXXXXXXXXXXXXXXXXKTMSGMNPLMCAVQQRWHSVAEAILEWSAGCIEGDE--DGQIPSPNEMCSTLDAEGKTAMMLAKENGDVPMQKLLKAYAPKMSPSTWC--GSTSKKQLSAVVVPP 642
G++Q V+ LVE+G+V+VN+KGAQDRTALHRAAGANHV II YLL+AGAPVD ADRC R KT+SGMNPLMCAVQQRWHSVAEAILEWS GC E +E DG +PSP E+CS DAEGKTA++ AKE GDVPMQKLLK+Y PK PS WC G ++QLSAV VPP
Sbjct: 21 GDIQSVRQLVETGEVNVNQKGAQDRTALHRAAGANHVGIILYLLQAGAPVDTADRCLRTPLHWAAISGHLDATQLLLERGGDLRSKTVSGMNPLMCAVQQRWHSVAEAILEWSEGCTEDEEGVDGPVPSPAELCSATDAEGKTAVVFAKELGDVPMQKLLKSYMPKQ-PSAWCCGGGAVQQQLSAVAVPP 209
BLAST of mRNA_P-fluviatile_contig22.4989.1 vs. uniprot
Match: A0A6H5JSR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR0_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 1.930e-18 Identity = 43/71 (60.56%), Postives = 52/71 (73.24%), Query Frame = 1
Query: 46 MPLDTELHKSAHKGNVQGVKDLVESGQVDVNEKGAQDRTALHRAAGANHVSIIQYLLRAGAPVDCADRCRR 258
MP DTELHK+AH G++ VK LVE G++ VNE GA +R ALHRAAG NHV I+ YL+ GAPVD D+ R
Sbjct: 1 MPTDTELHKAAHNGDLGKVKQLVEDGEIAVNEPGAAERRALHRAAGGNHVEIMNYLMEKGAPVDQTDKSGR 71
BLAST of mRNA_P-fluviatile_contig22.4989.1 vs. uniprot
Match: A0A835YTH2_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTH2_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.290e-17 Identity = 84/176 (47.73%), Postives = 108/176 (61.36%), Query Frame = 1
Query: 46 MPLDTELHKSAHKGNVQGVKDLVESGQVDVNEKGAQDRTALHRAAGANHVSIIQYLLRAGAPVDCADRCRRXXXXXXXXXXXXXXXXXXXXXXXXXXXKTMSGMNPLMCAVQQRWHSVAEAILEWSAGCIEGDEDGQIPSPNEMCSTLDAEGKTAMMLAKENGDVPMQKLLKAYAP 573
MPLDTELHK A+KG++ G+++L+E+ DVN GA DRTALHRAAGA + ++QYLL+AGA XXXXXXXXXXXXXXXXXXXXXXX T +G M A + EA++ W +E D ++ +D EGK A+ +AKE D + K +KA AP
Sbjct: 1 MPLDTELHKCANKGDLAGIRELIETDGADVNALGANDRTALHRAAGAGQLEVLQYLLKAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPIVSTTTGTTAFMAAAGVNSLATVEALIGW----VEVHPDKY--EMRDLVGGVDNEGKGALQIAKE-ADPALAKAIKARAP 169
BLAST of mRNA_P-fluviatile_contig22.4989.1 vs. uniprot
Match: D8LFE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE4_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 3.050e-17 Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 46 MPLDTELHKSAHKGNVQGVKDLVESGQVDVNEKGAQDRTALHRAAGANHVSIIQYLLRAGAPVDCADR 249
MP DTELHK+AH G++ VK LVE G++ VNE GA +R ALHRAAG NHV I+ YL+ GAPVD D+
Sbjct: 1 MPTDTELHKAAHNGDLGKVKQLVEDGEIAVNEPGAAERRALHRAAGGNHVEIMNYLMEKGAPVDQTDK 68
BLAST of mRNA_P-fluviatile_contig22.4989.1 vs. uniprot
Match: A0A836CGQ7_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGQ7_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 6.650e-16 Identity = 40/62 (64.52%), Postives = 47/62 (75.81%), Query Frame = 1
Query: 46 MPLDTELHKSAHKGNVQGVKDLVESGQVDVNEKGAQDRTALHRAAGANHVSIIQYLLRAGAP 231
MP DTELHK+AH G++ K+L E+G VDVNE GA DR ALHRAAG NH +I+YLL GAP
Sbjct: 1 MPTDTELHKAAHNGDLAKCKELTEAGGVDVNEPGAADRRALHRAAGGNHTGVIEYLLSKGAP 62
BLAST of mRNA_P-fluviatile_contig22.4989.1 vs. uniprot
Match: A0A836CN67_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN67_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 6.730e-14 Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = 1
Query: 46 MPLDTELHKSAHKGNVQGVKDLVESGQVDVNEKGAQDRTALHRAAGANHVSIIQYLL 216
MP DTELHK+AH G++ K+L+E G +VNE GA DR ALHRAAG NHV++I+YLL
Sbjct: 1 MPTDTELHKAAHNGDLAKCKELIEGGGAEVNEPGASDRRALHRAAGGNHVAVIEYLL 57
BLAST of mRNA_P-fluviatile_contig22.4989.1 vs. uniprot
Match: A0A482SYJ6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SYJ6_9ARCH) HSP 1 Score: 71.6 bits (174), Expect = 1.430e-11 Identity = 35/75 (46.67%), Postives = 47/75 (62.67%), Query Frame = 1
Query: 46 MPLDTELHKSAHKGNVQGVKDLVESGQ-----VDVNEKGAQDRTALHRAAGANHVSIIQYLLRAGAPVDCADRCR 255
MP+D ELHK+AHKG+++ K ++E V+VN+ GA DR ALHRAAGA H+ I Y GA VD + +
Sbjct: 1 MPVDNELHKAAHKGDLEVCKAILEGQMELEEPVNVNDPGASDRRALHRAAGAGHLDICHYFFEKGADVDAVSKAK 75
BLAST of mRNA_P-fluviatile_contig22.4989.1 vs. uniprot
Match: A0A2R5GY75_9STRA (Ankyrin repeat domain-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GY75_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 4.330e-10 Identity = 29/61 (47.54%), Postives = 46/61 (75.41%), Query Frame = 1
Query: 46 MPLDTELHKSAHKGNVQGVKDLVESGQVDVNEKGAQDRTALHRAAGANHVSIIQYLLRAGA 228
MP DT LHK+A++G+V+ +++++SG+VD+N GA +RTAL RA G NH+ + + L+ GA
Sbjct: 1 MPQDTSLHKAANQGDVEACREILDSGEVDINAPGAAERTALQRAVGGNHMELAKLLIERGA 61
BLAST of mRNA_P-fluviatile_contig22.4989.1 vs. uniprot
Match: A0A2R5GN98_9STRA (Ankyrin repeat domain-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GN98_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 4.450e-10 Identity = 32/68 (47.06%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 46 MPLDTELHKSAHKGNVQGVKDLVESGQVDVNEKGAQDRTALHRAAGANHVSIIQYLLRAGAPVDCADR 249
MP DT+LHK+A+KGN V+ ++ +DVNE GA +RTALHRA + ++ LL GA VD D+
Sbjct: 1 MPRDTDLHKAAYKGNANAVRACIDEDMIDVNEFGAANRTALHRAVASGSTEVVALLLDRGAIVDIQDK 68 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig22.4989.1 >prot_P-fluviatile_contig22.4989.1 ID=prot_P-fluviatile_contig22.4989.1|Name=mRNA_P-fluviatile_contig22.4989.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=386bp MPLDTELHKSAHKGNVQGVKDLVESGQVDVNEKGAQDRTALHRAAGANHVback to top mRNA from alignment at P-fluviatile_contig22:2065226..2071218+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig22.4989.1 ID=mRNA_P-fluviatile_contig22.4989.1|Name=mRNA_P-fluviatile_contig22.4989.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5993bp|location=Sequence derived from alignment at P-fluviatile_contig22:2065226..2071218+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig22:2065226..2071218+ >mRNA_P-fluviatile_contig22.4989.1 ID=mRNA_P-fluviatile_contig22.4989.1|Name=mRNA_P-fluviatile_contig22.4989.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2316bp|location=Sequence derived from alignment at P-fluviatile_contig22:2065226..2071218+ (Porterinema fluviatile SAG_2381)back to top |