mRNA_P-fluviatile_contig22.4980.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig22.4980.1 vs. uniprot
Match: A0A6H5JA20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA20_9PHAE) HSP 1 Score: 603 bits (1554), Expect = 8.300e-196 Identity = 451/876 (51.48%), Postives = 528/876 (60.27%), Query Frame = 1
Query: 103 MLRLGGPMRVGGLGGLTVDQCLDEIKASRLPGAFVRSQVRCLLRYMNEVAGLQGRIEGDSGFEADTACYLDILLCKDEAELMRRVSSTRCLLQ---------------DFEEKRLEWRKQRKSVINAIGSMTARVLRFEDKERKTIALHALVFYKNVMATNDGAIPGESESTDGLTQQYKRHRTEISKIPMYADSILKMLKDIRKTVRASSKLQLQPGPNPFAQFLDE--------------------------WWASVVQFLEQSSIIDAEKNAREVMQTLKKLKDKQEESKKREISRLLSKLDDNAGL---LPMTGPL-SELPEPSGAPPPSDASPTPQDTTSRDC-GGLRLPSTSGTPRPPPAPENLERDRXXXXXXXXXXXXXXXXXXXGQEGDRACSRPEGPATITHQQHQ-------------------QRVSLVDESGHFGIVDS--RSSTSTSVSVDRGAAAPVSNSKASVLASEN-GRCRTSRRRPALT-------VCDDDGGGHSGAGPDVGSLRSPSSGGLRLRGKPIL-TAGVGGVSIPSR----------------------VSWEEDSQGTAGTMDTMENMTMRLFGARPVSGIPDSDDXXXXXXXXXXXXXXXXNDLFEAADNLDLGAVDLCATGTGADGHMTYQDQEELRLPAKVAGPPQQKGVEEERFSAALDFFRQEQHRKTKRPAFYLPSPSPLRTAASFSSLPT----SASLRSPRGSRG---------NGNPFTPRLVGGSSAVRVRTPYSRSSHRGEGKDGAVGKAKAVTRRTISGERGRKASTGRDRLLSADSRSSGRVNPKTFGRSLSVYIPSSSAQATPTQRAAQTPTVNSSRRALMSPGVGSAPRPAFFG 2397
MLR+GGPMR+GG G T+ +C+ E++ S LP AF +QVR L+RY+ EV LQ RI +SGFEADT YL+IL K++ +LMR+VSSTR L Q D++EKRLEW+KQ+KSVINAIGSMTAR LRFEDKERKTIALHAL FYK++MAT+DGAIPGESESTD L +QYKRHR+EISKIPMYAD ILKMLKDIRKTVRASSKLQ PGPN FAQFL+E WWASVVQFL+QSSI++AEKNAREVMQTLKKLK KQEE KKREISRLLSKLDDNA + LP TG L ELP + PPSD S TP++T+S GG++ + ++R+R G + C + Q QRVS D H + S S+ + S S+ R A V+ + GR + PALT C GG+SG + L+SP+SGGL G +L G GG PSR VSWEE+SQGTAGTMDT E M A SGIPDS XXXXXXXXXXXXXXXX +LFEAADNLDLGAVDLCATG GADG TY+DQ+ELRLPAKVAGPPQ+KGVE+ERFSAALDFFRQEQ + +R A +PSP+ +F SLP+ S+S SPR S NPF + G SS VR+RTP SRS R E + KAK VTRR +S ER A T RDRLLSAD+ + GR RS+SVYIPSS +Q TP RA++TPTV SSRRAL SPGV R AFFG
Sbjct: 1 MLRVGGPMRIGGATGGTMSECIAELQESSLPDAFKLAQVRSLVRYIKEVGLLQRRIIDESGFEADTNSYLEILCAKEDGDLMRKVSSTRVLRQARDSKGQHRQTEPIKDYDEKRLEWKKQKKSVINAIGSMTARTLRFEDKERKTIALHALAFYKSIMATDDGAIPGESESTDALIEQYKRHRSEISKIPMYADRILKMLKDIRKTVRASSKLQ--PGPNSFAQFLEEARPAPMFNRSLFVTLLPKCCSVASRKWWASVVQFLQQSSIVEAEKNAREVMQTLKKLKGKQEEGKKREISRLLSKLDDNASIDQHLP-TGYLPEELPPKAAGSPPSDESKTPEETSSITVSGGVQQ-------------QGMKRERDSCSSEESELSSLPAPVVIGDD----CKLSPAIERLVLDPRQEXXXXXXXXXXXXXXXXXXQRVSFTD---HLEVSASGGTSTMARSSSIVRSTALTVATGXXXXXXXXSCGRTKP----PALTWSADREDACGSRVGGNSGG---INPLKSPASGGLSSPGTRMLGIGGEGGSGFPSRKNTHASCLGKTKHPLDFLYARKVSWEEESQGTAGTMDTAE---MHAQHAVSFSGIPDS--XXXXXXXXXXXXXXXXXELFEAADNLDLGAVDLCATGNGADGQTTYKDQDELRLPAKVAGPPQKKGVEQERFSAALDFFRQEQQGRPRRMAVSPRAPSPMHKLTTFGSLPSGFSSSSSRTSPRASAXXXXXXXASTTSNPFALK-PGVSSGVRLRTPSSRS--RAEVRSAVKTKAKTVTRRRMSAERD--AGTARDRLLSADNTAYGRGKTP-LARSMSVYIPSSRSQTTPVHRASKTPTVKSSRRALKSPGVRGFTRGAFFG 835
BLAST of mRNA_P-fluviatile_contig22.4980.1 vs. uniprot
Match: D7FGW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW7_ECTSI) HSP 1 Score: 400 bits (1029), Expect = 2.640e-126 Identity = 218/303 (71.95%), Postives = 253/303 (83.50%), Query Frame = 1
Query: 103 MLRLGGPMRVGGLGGLTVDQCLDEIKASRLPGAFVRSQVRCLLRYMNEVAGLQGRIEGDSGFEADTACYLDILLCKDEAELMRRVSSTRCLLQDFEEKRLEWRKQRKSVINAIGSMTARVLRFEDKERKTIALHALVFYKNVMATNDGAIPGESESTDGLTQQYKRHRTEISKIPMYADSILKMLKDIRKTVRASSKLQLQPGPNPFAQFLDEWWASVVQFLEQSSIIDAEKNAREVMQTLKKLKDKQEESKKREISRLLSKLDDNAGL---LPMTGPLSELPEPSGAPPPSDASPTPQDTTS 1002
MLR+GGPMRVGG G T+ +C+ E++ S LP AF +QVR L+RY+ EV LQ RI +SGFEADT YL+IL K++ +LMR+VSSTR L QD++EKRLEW++Q+KSVINAIGSMTAR LRFEDKERKTIALHAL FYK++MAT+DGAIPGESESTD L +QYKRHR+EISKIPMYADSILKMLKDIRKTVRASSKLQ PG N FAQFL+EWWASVVQFL+QSSI++AEKNAREVMQTLKKLK KQEE KKREISRLLSKLDDNA + LP+ ELP + PPSD S TP++T+S
Sbjct: 1 MLRVGGPMRVGGATGGTMSECIAELQESSLPDAFKLAQVRSLVRYIKEVGLLQRRIIDESGFEADTNSYLEILCAKEDGDLMRKVSSTRVLRQDYDEKRLEWKRQKKSVINAIGSMTARTLRFEDKERKTIALHALAFYKSIMATDDGAIPGESESTDSLMEQYKRHRSEISKIPMYADSILKMLKDIRKTVRASSKLQ--PGTNSFAQFLEEWWASVVQFLQQSSIVEAEKNAREVMQTLKKLKGKQEEGKKREISRLLSKLDDNASIDQHLPVGYLSEELPPEAAGFPPSDESKTPEETSS 301
BLAST of mRNA_P-fluviatile_contig22.4980.1 vs. uniprot
Match: D7FGX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX8_ECTSI) HSP 1 Score: 367 bits (942), Expect = 1.010e-109 Identity = 270/598 (45.15%), Postives = 331/598 (55.35%), Query Frame = 1
Query: 124 MRVGGLGGLTVDQCLDEIKASRLPGAFVRSQVRCLLRYMNEVAGLQGRIEGDSGFEADTACYLDILLCKDEAELMRRVSSTRCLLQDFEEKRLEWRKQRKSVINAIGSMTARVLRFEDKERKTIALHALVFYKNVMATNDGAIPGESESTDGLTQQYKRHRTEISKIPMYADSILKMLKDIRKTVRASSKLQLQPGPNPFAQFLDEWWASVVQFLEQSSIIDAEKNAREVMQTLKKLKDKQEESKKREISRLLSKLDDNAGLLPMTGPLSELPEPSGAPPPSDASPTPQDTTSRDCGGLRLPSTSGTPRPPPAPENLERDRXXXXXXXXXXXXXXXXXXXGQEGDRACSRPEGPATITHQQHQQRVSLVDESGHFGIVDSRSSTSTSVSVDRGAAAPVSNSKASVLASENGRCRTSRRRPALTVCDDDGGGHSGAGPDVGSLRSPSSGGLRLRGKPILTAGVGGVSIPSRVSWEEDSQGTAGTMDTMENMTMRLFGARPVSGIPDSDDXXXXXXXXXXXXXXXXNDLFEAADNLDLGAVDLCATGTGADGHMTYQDQEELRLPAKVAGPPQQKGVEEERFSAALDFFRQEQHRKTKRP 1917
MRVGG G T+ QC+ EI+ S LP F QVR L+RYM EV GL I +SGFEAD YL+IL K+E+EL RRVS TR L QDF+EKR EWR+ +K+VINAI M+AR L+FE E+KTIALHA+ FYKNVMA ++GAIPGESESTDGL QY+RHR EISKIP YADSI+KMLKDIR+TV AS+KLQ PG N F QFLDEWWASVV+FLEQS I+DAE+NAREVMQTLKKLK KQEE KKRE+SRL++KL+ P P SE A D S P+DT + E+ R + + EG + H + V + E GH G+ D S+ C SR +LT + G + G S ++ + G +S+ SW+ S+ T GT + T + A SG+P+ + XXXXXXXX FE AD+LDLGAV LCA TGADG TYQD R P + + GVE++RFSAALD+FRQEQ K +RP
Sbjct: 2 MRVGGTRG-TMQQCIAEIEDSALPQDFKLKQVRSLVRYMREVDGLVRGINSESGFEADCTAYLEILCTKEESELNRRVSCTRVLKQDFDEKRREWRRTKKNVINAISEMSARALKFECSEKKTIALHAIQFYKNVMANDNGAIPGESESTDGLIDQYRRHRDEISKIPFYADSIMKMLKDIRRTVNASAKLQ--PGSNAFTQFLDEWWASVVEFLEQSPIVDAERNAREVMQTLKKLKGKQEEFKKREMSRLMNKLEAQDKATPPMTPASE------AVVILDDSVNPEDTVRWN----------------------EKARP--------------------DDEEGSVLEEGDTEHDYDGHDEAVDELSELGHGGVDDM---------------------------SQWSECSPSRSEASLTPRRQ----LAERGRERGFTTSMAT----------IPDNAGNMSV---ASWDVGSEPTLGT----DGGTDQDIAA--ASGLPEDESEXXXXXXXXE---------FEVADSLDLGAVALCAVETGADGQQTYQDT--ARTPQAMRHLTNKLGVEQQRFSAALDYFRQEQRTKGRRP 487
BLAST of mRNA_P-fluviatile_contig22.4980.1 vs. uniprot
Match: D7FGW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW6_ECTSI) HSP 1 Score: 246 bits (628), Expect = 9.190e-69 Identity = 193/343 (56.27%), Postives = 222/343 (64.72%), Query Frame = 1
Query: 1411 GGHSGAGPDVGSLRSPSSGGLRLRGKPIL-TAGVGGVSIPSRVSWEEDSQGTAGTMDTMENMTMRLFGARPVSGIPDSDDXXXXXXXXXXXXXXXXNDLFEAADNLDLGAVDLCATGTGADGHMTYQDQEELRLPAKVAGPPQQKGVEEERFSAALDFFRQEQHRKTKRPAFYLPSPSPLRTAASFSSLPT----SASLRSPRGSRGN---------GNPFTPRLVGGSSAVRVRTPYSRSSHRGEGKDGAVGKAKAVTRRTISGERGRKASTGRDRLLSADSRSSGRVNPKTFGRSLSVYIPSSSAQATPTQRAAQTPTVNSSRRALMSPGVGSAPRPAFFG 2397
GG+SG + L+SP+SGGLR G +L G GG PSRVSWEE S E M A SGIPDSDDXXXXXXXXXXXXXXXX LFEAADNLDLGAVDLCATG GADG TY+DQ+E+RLPAKVAGPPQ+KGVE+ERFSAALDFFRQEQ + +R A +PSP+ +F +LP+ S+S SPR S NPF + G SS VR+RTP SRS R E + KAK VTRR +S ER A T RDRLLS+D+ + GR RS+SVYIPSS +Q TP RA++TPTV SSRR L SPGV R AFFG
Sbjct: 48 GGNSGG---INPLKSPASGGLRSPGTRMLGIGGEGGSGFPSRVSWEEGSXXXXXXXXXAE---MHAQHAVSFSGIPDSDDXXXXXXXXXXXXXXXXX-LFEAADNLDLGAVDLCATGKGADGQTTYKDQDEVRLPAKVAGPPQKKGVEQERFSAALDFFRQEQQGRPRRMAVSPRAPSPMHKLTTFGTLPSGFSSSSSRTSPRTSATTITSMTAATTTNPFALK-PGVSSGVRLRTPSSRS--RAEVRSAVKTKAKTVTRRRMSAERD--AGTARDRLLSSDNTAYGRGKTP-LARSMSVYIPSSRSQTTPVHRASKTPTVKSSRRTLKSPGVRGFTRGAFFG 377
BLAST of mRNA_P-fluviatile_contig22.4980.1 vs. uniprot
Match: A0A6H5JCK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK0_9PHAE) HSP 1 Score: 218 bits (554), Expect = 6.570e-58 Identity = 191/463 (41.25%), Postives = 234/463 (50.54%), Query Frame = 1
Query: 529 MATNDGAIPGESESTDGLTQQYKRHRTEISKIPMYADSILKMLKDIRKTVRASSKLQLQPGPNPFAQFLDEWWASVVQFLEQSSIIDAEKNAREVMQTLKKLKDKQEESKKREISRLLSKLDDNAGLLPMTGPLSELPEPSGAPPPSDASPTPQDTTSRDCGGLRLPSTSGTPRPPPAPENLERDRXXXXXXXXXXXXXXXXXXXGQEGDRACSRPEGPATITHQQHQQRVSLVDESGHFGIVDSRSSTSTSVSVDRGAAAPVSNSKASVLASENGRCRTSRRRPALTVCDDDGGGHSGAGPDVGSLRSPSSGGLRLRGKPILTAGVGGVSIPSRVSWEEDSQGTAGTMDTMENMTMRLFGARPVSGIPDSDDXXXXXXXXXXXXXXXXNDLFEAADNLDLGAVDLCATGTGADGHMTYQDQEELRLPAKVAGPPQQKGVEEERFSAALDFFRQEQHRKTKRP 1917
MA ++GAIPGESESTDGL QY+RHR EISKIP YADSI+KMLKDIR+TV AS+KLQ PG N F QFLDEWWASVV+FLEQS I+DAE+NAREVMQTLKKLK KQEE KKRE+SRL++KL+ P P SE A D S P+DT + E D D S EG + H + V + E GH G+ D + +S S S+AS+ T RR+ A G + G S ++ + G S+ SW+ S+ T GT + T + A SG+P+ + XXXXXXX FE AD+LDLGAV LCA TGADG TYQD R P + + GVE++RFSAALD+FRQEQ +RP
Sbjct: 1 MANDNGAIPGESESTDGLIDQYRRHRDEISKIPFYADSIMKMLKDIRRTVNASAKLQ--PGSNAFTQFLDEWWASVVEFLEQSPIVDAERNAREVMQTLKKLKGKQEEFKKREMSRLMNKLEAQDKATPPMTPASE------AVVILDDSVNPEDTVRWN-------------------EKARPD------------------------DEEGSVLEGDTEHDYDGHDEAVDELSELGHGGLDDMSQWSESSPS----------RSEASL---------TPRRQLAER------------GRERGFTTSMAT----------IPDNTGNTSV---ASWDVRSEPTLGT----DGGTDQDIAA--ASGLPEDESDXXXXXXXE----------FEVADSLDLGAVALCAVQTGADGQQTYQDT--ARTPQAMRHLTNKLGVEQQRFSAALDYFRQEQRTMGRRP 350 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig22.4980.1 >prot_P-fluviatile_contig22.4980.1 ID=prot_P-fluviatile_contig22.4980.1|Name=mRNA_P-fluviatile_contig22.4980.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=766bp MLRLGGPMRVGGLGGLTVDQCLDEIKASRLPGAFVRSQVRCLLRYMNEVAback to top mRNA from alignment at P-fluviatile_contig22:1974550..1984960- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig22.4980.1 ID=mRNA_P-fluviatile_contig22.4980.1|Name=mRNA_P-fluviatile_contig22.4980.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10411bp|location=Sequence derived from alignment at P-fluviatile_contig22:1974550..1984960- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig22:1974550..1984960- >mRNA_P-fluviatile_contig22.4980.1 ID=mRNA_P-fluviatile_contig22.4980.1|Name=mRNA_P-fluviatile_contig22.4980.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4596bp|location=Sequence derived from alignment at P-fluviatile_contig22:1974550..1984960- (Porterinema fluviatile SAG_2381)back to top |