mRNA_P-fluviatile_contig22.4953.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig22.4953.1 vs. uniprot
Match: D8LD63_ECTSI (Rhomboid-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD63_ECTSI) HSP 1 Score: 569 bits (1467), Expect = 2.750e-199 Identity = 293/391 (74.94%), Postives = 316/391 (80.82%), Query Frame = 1
Query: 1 DAELLRSLRREIGAPTRPTNIARGGAGGSIGGXXXXXXGGTARRIVGGNA-----------------GFVNDLSSMGLMRDAEEGRGVGDDIGDYDYGEEGG-------DRNLDGQEYGLVMFDPVWGKPDYPPGHHTSACEFCGVLCCPCLMGRDGWRTARNLNVWRRIRKRAAIIISAIDIAAFVLSVVLNGGFQSMWGKVDSNPLLGPSPETLIALGAKHLTLIQEGQVWRLLTPVFLHGGVLHIFMNLTSQFRMGTFLEERWGTWNWLIIYWVGGFGGNLLSCVASPDKVGVGASGAIYAVMGGWLSHVLCTWHEEDEFAKGAQLAQVVGFTMIGMAASLAPLVDWAAHFGGLVTGVLVGWALFHKPAEGSRMLREPLLVKLRRLQG 1101
DAELLRSLRREIGAPTRP +RG AG S XXXXXX G V++LSSMGL+RDAEEGRG GD D GG D+N+DGQEYG VMFDPVWGKPDYPPGHHT+ C+FCGVLCCPCLMGRDGWR +RN NVWRRIRKRAAII S +DI AFVLS+++NGGFQSMWGKVDSNPLLGPS ETL+ALGAKHLTLIQEGQVWRLLTP+ LHGGVLHIFMNLTSQFRMGTFLEERWGT NWLI+YWVGG GGNLLSCVASPDKVGVGASGAIYA+MG WLSHVLCTW+EEDEFAKGAQL QVV +TM+GMAASLAP+VDWAAH GGLVTG+LVGWALFHKP E SRMLREPL +L RLQG
Sbjct: 5 DAELLRSLRREIGAPTRPAAASRG-AGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVHNLSSMGLLRDAEEGRG-----GDRDADNSGGGYDDDWEDQNMDGQEYGFVMFDPVWGKPDYPPGHHTTKCQFCGVLCCPCLMGRDGWRGSRNRNVWRRIRKRAAIITSGVDIVAFVLSIIINGGFQSMWGKVDSNPLLGPSIETLMALGAKHLTLIQEGQVWRLLTPILLHGGVLHIFMNLTSQFRMGTFLEERWGTRNWLIVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGAWLSHVLCTWNEEDEFAKGAQLTQVVLYTMVGMAASLAPIVDWAAHVGGLVTGILVGWALFHKPVEDSRMLREPLRRRLSRLQG 389
BLAST of mRNA_P-fluviatile_contig22.4953.1 vs. uniprot
Match: A0A7S2R6S9_9STRA (Rhomboid-like protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6S9_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.130e-46 Identity = 106/280 (37.86%), Postives = 153/280 (54.64%), Query Frame = 1
Query: 241 GEEGGDRNLDGQEYGLVMFDPVWGKPDYPPGHHTSACEFCGVLCCPCL-MGR------DGWRTARNLNVWRRIR--KRAAIIISAIDIAAFVLSVVLNGGFQSMWGKVDSNPLLGPSPETLIALGAKHLTLIQ-EGQVWRLLTPVFLHGGVLHIFMNLTSQFRMGTFLEERWGTWNWLIIYWVGGFGGNLLSCVASPDKVGVGASGAIYAVMGGWLSHVLCTWH---EEDEFAKGAQLAQVVGFTMIGMAASLAPLVDWAAHFGGLVTGVLVGWALF-HK 1038
G E GD D QE L + DPVWGK + PG S + CPCL +GR G+ + R +R +++++ + +A +++ L+ G + NP++GP L LGAK+ LI Q WRL TP+ LH G +H+ +N+ Q R+G LE +WG + IIY GF +LSC+A PD +GVG+SGAI ++G WL+ ++C W EE+ + A L V +I ++ SL PLVDWAAH GGL+ G ++G LF HK
Sbjct: 95 GMEAGD---DAQEETLTLEDPVWGKLELAPGQRPSPTQIICFSLCPCLCIGRCCVKTPGGFYSCHPEKGARCLRFVLTLSVLLALVQVAMLAIAIALSDGLAP----TEQNPMVGPYATILDRLGAKNAALIAYRNQWWRLFTPMLLHAGFIHLAVNVLIQVRIGVILEYQWGIAIYTIIYITSGFLSAILSCIALPDSLGVGSSGAIMGILGAWLAEIVCAWSSTPEEELGQRSANLVLVFLNILITLSFSLVPLVDWAAHIGGLLAGWMMGVVLFGHK 367
BLAST of mRNA_P-fluviatile_contig22.4953.1 vs. uniprot
Match: A0A7S2AL17_9DINO (Rhomboid-like protease (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2AL17_9DINO) HSP 1 Score: 162 bits (409), Expect = 4.470e-42 Identity = 89/252 (35.32%), Postives = 134/252 (53.17%), Query Frame = 1
Query: 289 VMFDPVWGKPDYPPGHHTSACEFCGVLCCPCLMGRDGWRTARNLNVWRRIRKRAAIIISAIDIAAFVLSVVLNGGFQSMWGKVDSNPLLGPSPETLIALGAKHLTLIQ-EGQVWRLLTPVFLHGGVLHIFMNLTSQFRMGTFLEERWGTWNWLIIYWVGGFGGNLLSCVASPDKVGVGASGAIYAVMGGWLSHVLCTWHEE---DEFAKGAQLAQVVGFTMIGMAASLAPLVDWAAHFGGLVTGVLVGWALF 1032
++DP+WG+ G AC+ CCPC M G + R W++ + + + + V++V L GG + V+ NP++GP L LGAK+ I+ + WR+L+P+ LH G LH+ NL+ Q R G LE WG +WL +Y G G L C+ SP +GVG+SGA+ ++G W S +L TW++ D + AQ VV ++ + S PL+D+AAH GGL+ G V A+F
Sbjct: 26 TLWDPLWGEIILAEGGRKRACQHFTFACCPCAMMGCGGQARR---FWQKFLLSWSFGLGLLQVIMMVVAVALYGGHDA----VERNPMIGPHYHVLDKLGAKNAARIRWNWEWWRILSPMLLHAGWLHLVGNLSVQLRTGAMLEAAWGGASWLCVYVTSGAFGALAGCLMSPQHLGVGSSGALCGLLGAWASFILITWNQTSPVDIKLRNAQSFSVVLSMLVIIGLSFLPLMDFAAHVGGLLMGAAVAMAIF 270
BLAST of mRNA_P-fluviatile_contig22.4953.1 vs. uniprot
Match: A0A7S1FIW9_NOCSC (Rhomboid-like protease n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FIW9_NOCSC) HSP 1 Score: 154 bits (389), Expect = 5.590e-38 Identity = 87/256 (33.98%), Postives = 131/256 (51.17%), Query Frame = 1
Query: 292 MFDPVWGKPDYPPGHHTSACEFCGVLCCPCLMGRDGWRTARNLNV-----WRRIRKRAAIIISAIDIAAFVLSVVLNGGFQSMWGKVDSNPLLGPSPETLIALGAKHLTLIQEGQVW-RLLTPVFLHGGVLHIFMNLTSQFRMGTFLEERWGTWNWLIIYWVGGFGGNLLSCVASPDKVGVGASGAIYAVMGGWLSHVLCTWHE---EDEFAKGAQLAQVVGFTMIGMAASLAPLVDWAAHFGGLVTGVLVGWALF 1032
++DP+WG S + CP +M G +R ++V W+R + ++S + V + ++GG NP++GP GAK+ I+ W RLL+ V LH G +HI NL Q R+G LE WG WL+IYWV G G ++S V P+ +GVGASGAI ++G W ++CTW++ D+ + +Q VV + +A S P+VDWAAH GG++ G+ +G LF
Sbjct: 128 LWDPIWGDMTLKNEDEVSWNVRVLYIMCPMIMVGFGLGQSRLVHVDKKAAWKRCFLSWSFVLSVLQTGCLVAQITVDGGIVPF----KENPMVGPGWAIFDEWGAKNAAKIKYNHEWYRLLSAVMLHAGWIHIVSNLMVQLRLGIMLEVLWGHTCWLVIYWVSGAYGTMVSSVMMPNTLGVGASGAICGIVGAWSVFIVCTWNQTLPRDKMTRNSQFMAVVWSLVALVALSFIPMVDWAAHIGGVIMGMGLGAFLF 379
BLAST of mRNA_P-fluviatile_contig22.4953.1 vs. uniprot
Match: A0A812VT23_9DINO (Rhomboid-like protease n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812VT23_9DINO) HSP 1 Score: 151 bits (381), Expect = 3.120e-37 Identity = 87/260 (33.46%), Postives = 133/260 (51.15%), Query Frame = 1
Query: 292 MFDPVWGKPDYPPGHHTSACEFCGVLCCPCLMGRDGWRTARNLNVWRRIRKRAAIIISAIDIAAFVLSVVLNGGFQSMWGKVDSNPLLGPSPETLIALGAKHLT-LIQEGQVWRLLTPVFLHGGVLHIFMNLTSQFRMGTFLEERWGTWNWLIIYWVGGFGGNLLSCVASPDKVGVGASGAIYAVMGGWLSHVLCTWHE---EDEFAKGAQLAQVVGFTMIGMAASLAPLVDWAAHFGGLVTGVLVGWALFHKPAEGSRM 1059
+ DP+WG+ SA CCPC + G T W + ++I++ + +A V + ++GG S + NP+LGP L G K+ ++ +G+ WRL + LH G +H+ NL Q G LE WG WL++Y+V G NLLSCV PD +GVG+SG + ++GGWLS + TW++ D + AQ+ +V ++ + S PL+D+AAH GGL+ G +F GSR+
Sbjct: 90 VVDPLWGEVTTTEA--PSAWFRLLFCCCPCCI--VGCSTKEAKRAWVKFLCSCSLILAVLQVAILVAVIAVDGGMVSY----EENPMLGPKFNRLDEAGGKNAAKILLQGEWWRLASATMLHAGWIHLAGNLVVQLHAGIQLEVIWGPTAWLVVYFVSGIYANLLSCVLHPDTIGVGSSGCLCGLIGGWLSFIFITWNQTLPSDIKMRNAQVTSIVLSILMVLVFSFLPLMDFAAHVGGLLMGTGTSMVMF-----GSRL 336
BLAST of mRNA_P-fluviatile_contig22.4953.1 vs. uniprot
Match: D2VPF7_NAEGR (Rhomboid-like protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VPF7_NAEGR) HSP 1 Score: 149 bits (375), Expect = 4.510e-36 Identity = 94/252 (37.30%), Postives = 132/252 (52.38%), Query Frame = 1
Query: 280 YGLVMFDPVWGKPDYPPGHHTSACEFCGVLCCPCLMGRDGWRTARNLNVWRRIRKRAAIIISAIDIAAFVLSVVLNGGFQSMWGKVDSNPLLGPSPETLIALGAKHLTLIQ-EGQVWRLLTPVFLHGGVLHIFMNLTSQFRMGTFLEERWGTWNWLIIYWVGGFGGNLLSCVASPDKVGVGASGAIYAVMGGWLSHVLCTWHEEDEFAKGAQLAQVVGFTMIGMAASLAPLVDWAAHFGGLVTGVLVGWALF 1032
Y L P W +HT C + CCPC +G T + ++ + K IS + I F++ V + GG S SNP +GPS TL+ LGAK I+ E Q+WRL TP+ +H G LH+FMNL Q + E+ W + L IY + G GGNLLSCVA PD V VGASGAI ++G +++++ W + K Q V +I + S + VD+A H GGL+ G ++G+A F
Sbjct: 154 YNLHGITPQW--------YHT-----CLMCCCPCFVGPPCSPTRKQ--DYKNMLKTFCFWISIVQIIYFIVEVSV-GGIDS------SNPSIGPSSSTLLLLGAKSAYKIKKEYQLWRLFTPLIMHAGFLHLFMNLFVQVMICMGYEKTWKWYRVLPIYIIAGVGGNLLSCVALPDSVSVGASGAIMGLIGAKVANIIIRWKKIPTQPKIMQCISVGFIIVITLLWSFSDYVDYAGHLGGLMCGFIIGFACF 383
BLAST of mRNA_P-fluviatile_contig22.4953.1 vs. uniprot
Match: A0A813K155_POLGL (Rhomboid-like protease n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813K155_POLGL) HSP 1 Score: 148 bits (373), Expect = 5.240e-36 Identity = 90/252 (35.71%), Postives = 130/252 (51.59%), Query Frame = 1
Query: 292 MFDPVWGKPDYPPGHHTSACEFCGVLCCPCLMGRDGWRTARNLNVWRRIRKRAAIIISAIDIAAFVLSVVLNGGFQSMWGKVDSNPLLGPSPETLIALGAKHLTLIQE-GQVWRLLTPVFLHGGVLHIFMNLTSQFRMGTFLEERWGTWNWLIIYWVGGFGGNLLSCVASPDKVGVGASGAIYAVMGGWLSHVLCTWHEE---DEFAKGAQLAQVVGFTMIGM-AASLAPLVDWAAHFGGLVTGVLVGWALF 1032
++DP+WG C + CCPC+ RT WR A ++ + L+GG + + NP++GP L GAK+ I+ + WRLL+ V LH G LH+ NL Q R G LE +G WL+IY + G L SCV +P K+GVG+SGA+ ++G WLS +L TW++ D A+ Q A VGF++I + A+S PL+D+AAH GGL+ G+ + LF
Sbjct: 103 IWDPLWGDIKLTSSEAPGFCTRLLLNCCPCVF--VSCRTDDGFRAWRSFLLSWACLLGFAQVIXXXXXXXLSGGHMPL----EENPMIGPHYHALDPAGAKNAARIKVFDEWWRLLSAVMLHAGWLHLAGNLIIQLRTGAMLEVLFGHSAWLLIYIISGAYSELCSCVINPSKLGVGSSGALCGLVGAWLSFILITWNQTLPLDVKARNVQ-AFSVGFSIIIIVASSFLPLMDFAAHIGGLIMGISLAMVLF 347
BLAST of mRNA_P-fluviatile_contig22.4953.1 vs. uniprot
Match: A0A6U0S1P1_9STRA (Rhomboid-like protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0S1P1_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.160e-35 Identity = 75/201 (37.31%), Postives = 115/201 (57.21%), Query Frame = 1
Query: 457 IISAIDIAAFVLSVVLNGGFQSMWGKVDSNPLLGPSPETLIALGAKH-LTLIQEGQVWRLLTPVFLHGGVLHIFMNLTSQFRMGTFLEERWGTWNWLIIYWVGGFGGNLLSCVASPDKVGVGASGAIYAVMGGWLSHVLCTWHEEDEF--------AKGAQLAQVVGFTMIGMAASLAPLVDWAAHFGGLVTGVLVGWALF 1032
I+ ++ A + +++L G + + NP++GP P+ + GAK+ L ++ +G+ WRLLTPV LH G+LH+ N+ Q+ +G F E+ WG+ WLI+Y G G ++LS PD + VG+SGAI + G LS + W+E E + QL V G ++ M S P VDWAAH GGL++G+ VG +F
Sbjct: 72 ILFSLTQVAILATMMLECGIAPL----NINPMIGPYPDVMSYWGAKNALKILDDGENWRLLTPVLLHAGILHLIGNVHVQWDLGVFFEKEWGSAAWLIVYLTSGVGSSILSVYCMPDNISVGSSGAIMGLFGAKLSEIFVKWYEPRETILEKVGHAVRKEQLCMVSGGVVLVMLLSFIPYVDWAAHLGGLLSGIAVGMVVF 268
BLAST of mRNA_P-fluviatile_contig22.4953.1 vs. uniprot
Match: A0A1Q9CX31_SYMMI (GTP-binding protein yptV4 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CX31_SYMMI) HSP 1 Score: 152 bits (383), Expect = 2.510e-35 Identity = 87/266 (32.71%), Postives = 132/266 (49.62%), Query Frame = 1
Query: 292 MFDPVWGKPDYPPGHHTSACEFCGVLCCPCLMGRDGWRTARNLNVWRRIRKRAAIIISAIDIAAFVLSVVLNGGFQSMWGKVDSNPLLGPSPETLIALGAKHLT-LIQEGQVWRLLTPVFLHGGVLHIFMNLTSQFRMGTFLEERWGTWNWLIIYWVGGFGGNLLSCVASPDKVGVGASGAIYAVMGGWLSHVLCTWHE---EDEFAKGAQLAQVVGFTMIGMAASLAPLVDWAAHFGGLVTGVLVGWALFHKPAEGSRMLREPLL 1077
+ DP+WG+ SA CCPC + G T W + + I++ + +A V + ++GG S + NP+LGP L G K+ ++ +G WRL + LH G +H+ NL Q G LE WG WL++Y+V G NLLSCV PD +GVG+SG + ++GGWLS + TW++ D + AQ+ +V ++ + S PL+D+AAH GGL+ G +F G M+ +L
Sbjct: 873 VVDPLWGEVTTTEA--PSAWFRLLFCCCPCCV--VGCSTKEAKRAWVKFLCSCSFILAVLQVAILVAVIAVDGGMVSY----EENPMLGPKFNRLDEAGGKNAAKILLQGDWWRLASATMLHAGWIHLAGNLVVQLHAGVQLEVIWGPTAWLVVYFVSGIYANLLSCVLHPDTIGVGSSGCLCGLIGGWLSFIFITWNQTLPSDIKMRNAQVTSIVLSILMVLVFSFLPLMDFAAHVGGLLMGTGTSMVMFGSRMTGLGMIANGIL 1130
BLAST of mRNA_P-fluviatile_contig22.4953.1 vs. uniprot
Match: A0A812XH88_9DINO (Rhomboid-like protease n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XH88_9DINO) HSP 1 Score: 150 bits (378), Expect = 3.210e-35 Identity = 87/260 (33.46%), Postives = 131/260 (50.38%), Query Frame = 1
Query: 292 MFDPVWGKPDYPPGHHTSACEFCGVLCCPCLMGRDGWRTARNLNVWRRIRKRAAIIISAIDIAAFVLSVVLNGGFQSMWGKVDSNPLLGPSPETLIALGAKHLT-LIQEGQVWRLLTPVFLHGGVLHIFMNLTSQFRMGTFLEERWGTWNWLIIYWVGGFGGNLLSCVASPDKVGVGASGAIYAVMGGWLSHVLCTWHE---EDEFAKGAQLAQVVGFTMIGMAASLAPLVDWAAHFGGLVTGVLVGWALFHKPAEGSRM 1059
+ DP+WG+ SA CCPC + G T W + + I++ + +A V + ++GG S + NP+LGP L G K+ ++ +G WRL + LH G +H+ NL Q G LE WG WL++Y+V G NLLSCV PD +GVG+SG + ++GGWLS + TW++ D + AQ+ +V ++ + S PL+D+AAH GGL+ G +F GSR+
Sbjct: 358 VVDPLWGEVTTTEA--PSAWFRLLFCCCPCCV--VGCSTKEAKRAWVKFLCSCSFILAVLQVAILVAVIAVDGGMVSY----EENPMLGPKFNRLDEAGGKNAAKILLQGDWWRLASATMLHAGWIHLAGNLVVQLHAGVQLEVIWGPTAWLVVYFVSGIYANLLSCVLHPDTIGVGSSGCLCGLIGGWLSFIFITWNQTLPSDIKMRNAQVTSIVLSILMVLVFSFLPLMDFAAHVGGLLMGTGTSMVMF-----GSRL 604 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4953.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig22.4953.1 >prot_P-fluviatile_contig22.4953.1 ID=prot_P-fluviatile_contig22.4953.1|Name=mRNA_P-fluviatile_contig22.4953.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=380bp MGLMRDAEEGRGVGDDIGDYDYGEEGGDRNLDGQEYGLVMFDPVWGKPDYback to top mRNA from alignment at P-fluviatile_contig22:1596894..1607695+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig22.4953.1 ID=mRNA_P-fluviatile_contig22.4953.1|Name=mRNA_P-fluviatile_contig22.4953.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10802bp|location=Sequence derived from alignment at P-fluviatile_contig22:1596894..1607695+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig22:1596894..1607695+ >mRNA_P-fluviatile_contig22.4953.1 ID=mRNA_P-fluviatile_contig22.4953.1|Name=mRNA_P-fluviatile_contig22.4953.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2280bp|location=Sequence derived from alignment at P-fluviatile_contig22:1596894..1607695+ (Porterinema fluviatile SAG_2381)back to top |