mRNA_P-fluviatile_contig22.4932.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig22.4932.1
Unique NamemRNA_P-fluviatile_contig22.4932.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig22.4932.1 vs. uniprot
Match: D8LP63_ECTSI (Adenosinetriphosphatase n=2 Tax=root TaxID=1 RepID=D8LP63_ECTSI)

HSP 1 Score: 513 bits (1321), Expect = 2.050e-182
Identity = 247/281 (87.90%), Postives = 269/281 (95.73%), Query Frame = 1
Query:    1 MSASTNSINVNLKRFDCRAAMAAKCNAVVIGKRNTGKSVIIAELLYYLSKQKVPRACVFSATEESNRFFCRYIPDSFIFDEKNVEGKLIEIVEQQKRLKLRKDIGEIDQDTDLRIVIVLDDMGYNRKVLTSQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYVVCLKEGNKNVLRNLYDNFFGVFEKPVHFKNAFDACTKDFGCLVLNNTVASVLVNDTVHWYKATPDRKFRFGSKAFWKYHDERYVSIQDRYLLQSRPYADTTTSRDGTFVVNK 843
            M+++T SINVNLKRFDCRAAM+ KCNAVVIGKRNTGKSV+IAELLYYL+KQKVPRACVFSATEESNRFFCR+IPDSFIFDEKNVEGKL EIVEQQKRL+L++DIGEID DTDLR+VIVLDDMGYNRK LTSQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYV+CLKEGNKNV+RNLY+NFFGVFEKPVHFKNAFDACTKDFGCL+LNNTV SVLVNDTV+WYKATP+R F+FGS+ FW+YHDERYVSIQDRYLLQ RP ADTT S DGTFV++K
Sbjct:    8 MASTTGSINVNLKRFDCRAAMSVKCNAVVIGKRNTGKSVVIAELLYYLNKQKVPRACVFSATEESNRFFCRHIPDSFIFDEKNVEGKLTEIVEQQKRLQLQRDIGEIDPDTDLRVVIVLDDMGYNRKALTSQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYVICLKEGNKNVMRNLYENFFGVFEKPVHFKNAFDACTKDFGCLILNNTVTSVLVNDTVNWYKATPNRVFKFGSREFWEYHDERYVSIQDRYLLQHRPAADTTMSSDGTFVIHK 288          
BLAST of mRNA_P-fluviatile_contig22.4932.1 vs. uniprot
Match: A0A6H5KKN2_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN2_9PHAE)

HSP 1 Score: 511 bits (1317), Expect = 8.920e-167
Identity = 248/282 (87.94%), Postives = 271/282 (96.10%), Query Frame = 1
Query:    1 MSASTNSINVNLKRFDCRAAMAAKCNAVVIGKRNTGKSVIIAELLYYLSKQKVPRACVFSATEESNRFFCRYIPDSFIFDEKNVEGKLIEIVEQQKRLKLRKDIGEIDQDTDLRIVIVLDDMGYNRKVLTSQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYVVCLKEGNKNVLRNLYDNFFGVFEKPVHFKNAFDACTKDFGCLVLNNTVASVLVNDTVHWYKATPDRKFRFGSKAFWKYHDERYVSIQDRYLLQSRPYADTTTSRDGTFVVNKE 846
            M++ST SINVNL+RFDCRAAMA KCNAVVIGKRNTGKSV+IAELLYYLSKQKVPRACVFSATEESNRFFCR+IPDSFIFDEK+VE KLIEIVEQQKRL+L++DIGEID+DTDLRIVIVLDDMGYNRK+L+SQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYV+CLKEGNKNV+RNLY+NFFGVFEKPVHFKNAF ACTKDFGCL+LNNTVASVLVNDTVHWY+ATP+R F+FGSK FWKYH++RYVSI DRYLLQ  P ADTT SRDGTFVV+K+
Sbjct:  460 MASSTGSINVNLRRFDCRAAMAVKCNAVVIGKRNTGKSVLIAELLYYLSKQKVPRACVFSATEESNRFFCRHIPDSFIFDEKHVEAKLIEIVEQQKRLQLQRDIGEIDEDTDLRIVIVLDDMGYNRKILSSQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYVICLKEGNKNVMRNLYENFFGVFEKPVHFKNAFYACTKDFGCLILNNTVASVLVNDTVHWYEATPNRVFKFGSKEFWKYHNDRYVSIHDRYLLQRGPCADTTRSRDGTFVVHKQ 741          
BLAST of mRNA_P-fluviatile_contig22.4932.1 vs. uniprot
Match: B5LWH6_9PHYC (Putative VV A32 ATPase n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWH6_9PHYC)

HSP 1 Score: 265 bits (678), Expect = 1.110e-84
Identity = 125/272 (45.96%), Postives = 180/272 (66.18%), Query Frame = 1
Query:   28 VNLKRFDCRAAMAAKCNAVVIGKRNTGKSVIIAELLYYLSKQKVPRACVFSATEESNRFFCRYIPDSFIFDEKNVEGKLIEIVEQQKRLKLRKDIGEIDQDTDLRIVIVLDDMGYNRKVLTSQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYVVCLKEGNKNVLRNLYDNFFGVFEKPVHFKNAFDACTKDFGCLVLNNTVASVLVNDTVHWYKATPDRKFRFGSKAFWKYHDERYVSIQDRYLLQSRPYADTTTSRDGTFVVNK 843
            + L  F+ R A +   NAVVIGK++TGKS +I ++LY+L K+KVPR CVFS TEESN F+  ++P  FI+D+ +VE KL EIV+ QK   ++K +GE  +D D RI IVLDD+GY + +L S+I+  IFMNGRH+ I L+VA Q+ M +   LR+N DYV  LK+ N + ++NL++ +FG FEK   F+   +ACT+D+ CLVL+NT  S +  D   W+KA   R F+FG    W+YHD  +++ + RYL   +   +  +S+ G  VV K
Sbjct:   17 IKLSAFNPRTACSTFFNAVVIGKKHTGKSTLIKDILYHLHKKKVPRMCVFSGTEESNGFYKEFVPGLFIYDDSDVENKLNEIVDSQKETAMQKQLGEASEDLDSRIAIVLDDVGYKKNILKSEIIRQIFMNGRHHQIYLVVACQYCMDVGQDLRTNADYVYVLKQNNMSSIKNLHETYFGTFEKKKDFQTVLEACTQDYQCLVLDNTKPSTMTTDVCFWFKAKYSRNFKFGCSQLWEYHDRWFMTEKQRYLNDKKEKVENVSSKKGNLVVQK 288          
BLAST of mRNA_P-fluviatile_contig22.4932.1 vs. uniprot
Match: Q6XM75_9PHYC (FirrV-1-A12 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM75_9PHYC)

HSP 1 Score: 262 bits (669), Expect = 3.490e-83
Identity = 131/267 (49.06%), Postives = 177/267 (66.29%), Query Frame = 1
Query:   28 VNLKRFDCRAAMAAKCNAVVIGKRNTGKSVIIAELLYYLSKQKVPRACVFSATEESNRFFCRYIPDSFIFDEKNVEGKLIEIVEQQKRLKLRKDIGEIDQDTDLRIVIVLDDMGYNRKVLTSQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYVVCLKEGNKNVLRNLYDNFFGVFEKPVHFKNAFDACTKDFGCLVLNNTVASVLVNDTVHWYKATPDRKFRFGSKAFWKYHDERYVSIQDRYLLQSRPYADTTTSRDGT 828
            + L  F+ +AA +   NAVVIGK++TGKS +I ++LY + KQKVPR CVFS TEESN F+  +IPD FIFD+  VE KL +IVE QK++ ++K +GE   D D RIV+VLDD+GY +  L  +IL  IFMNGRH+ I+LIVA Q+ M L   LR+N DYV  LK+ N N ++NL++ +FG FEK   F+   +ACT D+ CLVL+NT  S    D   WYKA   ++++FG    W+YH   Y+S + RY  QS+     + SR GT
Sbjct:    6 IKLSAFNAKAACSKHFNAVVIGKKHTGKSTLIKDILYNVHKQKVPRICVFSGTEESNGFYREFIPDLFIFDDSMVEEKLTQIVESQKKIGMQKQLGECGDDVDSRIVVVLDDVGYKKNTLKCEILRQIFMNGRHHQISLIVACQYCMDLAIDLRTNADYVFVLKQNNMNSIKNLHETYFGSFEKKKDFQTVLEACTADYQCLVLDNTKPSTNTTDVCFWYKAKYGKEYKFGCPLLWEYHGRWYMSEKQRY--QSQQKTKPSRSRTGT 270          
BLAST of mRNA_P-fluviatile_contig22.4932.1 vs. uniprot
Match: A0A836CN20_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN20_9STRA)

HSP 1 Score: 200 bits (509), Expect = 2.820e-59
Identity = 98/264 (37.12%), Postives = 167/264 (63.26%), Query Frame = 1
Query:    1 MSASTNSINVNLKRFDCRAAMAAKCNAVVIGKRNTGKSVIIAELLYYLSKQKVPRACVFSATEESNRFFCRYIPDSFIFDEKNVEGKLIEIVEQQKRLKLRKDIGEIDQDTDLRIVIVLDDMGYNRKVLTSQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYVVCLKEGNKNVLRNLYDNFFGVFEKPVHFKNAFDACTKDFGCLVLNNTVASVLVNDTVHWYKATPDRKFRFGSKAFWKYHDERYVSIQDRYLLQSR 792
            M+A  N+  +++KRFD            + GKR TGKS +  +++Y+L K   PR CVFS TE +N FF  ++P  FI    ++   L  I++QQK L +++ +G+I  D D R++IVLDD  Y++K+L+S I+  I MNGRHY I+L+V +Q+++   P+LR+N D  + LK+  K     ++ +F G+F     F+  F++CT +F CL ++NT++S    D V +YKA  + +F+FG+++ W++HD+ Y+S +D ++++ +
Sbjct:    2 MNADANTNRISVKRFDISMLARKNFTMTLTGKRGTGKSYLTKDIMYHLHKAGFPRCCVFSQTESANGFFSTFVPGVFIHSPFDL-NVLANILKQQKDLIMKQKLGQIPADQDTRLLIVLDDCAYDKKILSSPIIREIMMNGRHYFISLVVTLQYLVDFAPSLRANVDVALFLKDNIKGNRERIWKHFCGMFSDYKVFEAVFESCTANFECLCVDNTISSTDNEDIVSYYKAG-EHEFKFGNRSLWRFHDKVYLSEEDEFVMRQQ 263          
BLAST of mRNA_P-fluviatile_contig22.4932.1 vs. uniprot
Match: A0A835Z5I5_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5I5_9STRA)

HSP 1 Score: 200 bits (508), Expect = 3.760e-59
Identity = 102/262 (38.93%), Postives = 164/262 (62.60%), Query Frame = 1
Query:    7 ASTNSINVNLKRFDCRAAMAAKCNAVVIGKRNTGKSVIIAELLYYLSKQKVPRACVFSATEESNRFFCRYIPDSFIFDEKNVEGKLIEIVEQQKRLKLRKDIGEIDQDTDLRIVIVLDDMGYNRKVLTSQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYVVCLKEGNKNVLRNLYDNFFGVFEKPVHFKNAFDACTKDFGCLVLNNTVASVLVNDTVHWYKATPDRKFRFGSKAFWKYHDERYVSIQDRYLLQSR 792
            A TN I+V  KRFD           V+ GKR +GKS +  +++++L + K PR C+FS TE +N FF  ++P  FI    ++   L  I++QQK L +R+ +G+I  D D R+++VLDD  Y+R++L S ++  I MNGRHY I+LIV +Q+++ L P+LR+N D  + LK+  +     ++ +F G +E    F+  F++CT +F C  ++NT++S    D V +YKA+ DR FRFG  + WK+HD  Y+S +D +L++ +
Sbjct:    4 APTNRISV--KRFDMSKLTKKHFTLVLTGKRGSGKSFLCKDIIFHLHEAKYPRCCIFSQTENANGFFSEFVPGIFIHSPFDL-NVLANIIKQQKDLIMRQKLGQIPADQDTRLLLVLDDCAYDRRILASPVMREIMMNGRHYFISLIVTLQYLVDLAPSLRANVDVALFLKDNIRGNRERVWKHFAGFYENFHVFEAVFESCTANFECFCVDNTLSSTRHEDIVSYYKAS-DRDFRFGHPSLWKFHDRVYLSEEDEFLMRQQ 261          
BLAST of mRNA_P-fluviatile_contig22.4932.1 vs. uniprot
Match: A0A835Z4N1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N1_9STRA)

HSP 1 Score: 185 bits (469), Expect = 2.600e-53
Identity = 91/255 (35.69%), Postives = 154/255 (60.39%), Query Frame = 1
Query:   28 VNLKRFDCRAAMAAKCNAVVIGKRNTGKSVIIAELLYYLSKQKVPRACVFSATEESNRFFCRYIPDSFIFDEKNVEGKLIEIVEQQKRLKLRKDIGEIDQDTDLRIVIVLDDMGYNRKVLTSQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYVVCLKEGNKNVLRNLYDNFFGVFEKPVHFKNAFDACTKDFGCLVLNNTVASVLVNDTVHWYKATPDRKFRFGSKAFWKYHDERYVSIQDRYLLQSR 792
            +++K+FD    +     A++  KR +GKS +  ++LY L  +  PR C+FS TE +N+FF  +IP+ F+    ++   L  I   QK + L++  G +D++ D RI+IVLDD  +++K  TSQ++  +  NGRHY +TLI+ +Q+++ L PA+RSN D+    ++  K     LY  F G +     F+  F+ACT ++ C+ ++NTV+S    D V +YKA     F+FG  + WK+HD+ ++S +D Y+L+ +
Sbjct:    8 ISVKKFDPSKLVQKHFVAIMTAKRGSGKSYLTKDILYRLHCEGFPRCCIFSGTEGANKFFSDFIPEVFVHSPLDL-NTLTHIWNTQKEIILKQRCGHLDENEDTRILIVLDDCSFDKKTFTSQVIREMLCNGRHYKLTLIITLQYLLDLPPAMRSNVDFGFFFRDNIKTNRERLYRQFAGFYPDYRTFEAVFEACTANYECMCVDNTVSSTDHTDIVSYYKAEAV-DFKFGPPSLWKFHDKLFISEEDEYILRQK 260          
BLAST of mRNA_P-fluviatile_contig22.4932.1 vs. uniprot
Match: A0A6C0LE87_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LE87_9ZZZZ)

HSP 1 Score: 179 bits (453), Expect = 5.720e-51
Identity = 98/245 (40.00%), Postives = 149/245 (60.82%), Query Frame = 1
Query:   64 AAKCNAVVIGKRNTGKSVIIAELLYYLSKQKVPRACVFSATEESNRFFCRYIPDSFIFDEKNVEGKLIEIVEQQKRLKLRKDIGEIDQDTDLRIVIVLDDMGYNRKVLTSQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYVVCLKEGNKNVLRN---LYDNFFGVFEKPVHFKNAFDACTKDFGCLVLNNTVASVLVNDTVHWYKATPDRKFRFGSKAFWKYHDERYV---SIQDRYL 780
            A     V IGKR TGKS ++A++LY+   +K+P     SATE+ N F+  YIPD FI  E   +  + +I+ +QK++ + K+ G+ D   D    ++LDD  Y+++++    +  IFMNGRH+ IT ++ +Q+ M L P LR+N D+V  L+E   N+++N   L+ NFFG+F     F+   ++CT+ F CLVL+NT  S  +ND + WY+A P+RKF+ GSK  W YH   Y    SI+D  L
Sbjct:   21 AGPATCVFIGKRGTGKSTLVADILYH--SKKIPMGVAISATEDGNAFYSSYIPDIFIHSEYKPDI-IQQIITRQKKV-ISKNPGKKDSTNDA--FVLLDDCMYDKRMIKDPNIRGIFMNGRHWRITFMLTMQYCMDLPPDLRTNIDFVFVLRE---NIIQNQDKLFKNFFGIFPHVDTFREVMNSCTEGFDCLVLDNTSRSNKINDCIFWYRAKPNRKFKIGSKELWNYHKNNYNDKHSIEDEQL 256          
BLAST of mRNA_P-fluviatile_contig22.4932.1 vs. uniprot
Match: A0A835YWY0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWY0_9STRA)

HSP 1 Score: 177 bits (448), Expect = 3.190e-50
Identity = 102/281 (36.30%), Postives = 160/281 (56.94%), Query Frame = 1
Query:   31 NLKRFDCRAAMAAKCNAVVIGKRNTGKSVIIAELLYYLSKQKVPRACVFSATEESNRFFCRYIPDSFIFDEKNVEGKLIEIVEQQKRLKLRKDIGEIDQDTDLRIVIVLDDMGYNRKVLTSQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYVVCLKEGNKNVLRNLYDNFFGVFEKPVHFKNAFDACTKDFGCLVLNNTVASVLVNDTVHWYKATPDRKFRFGSKAFWKYHDERYVSIQDRYL-LQ-----SRPYADTTTSRDG--TFVVNKEG 849
            N  +FD +    +     ++GKR TGKS++I +LLY+L+   VPR   FSATEE+N +F  ++P  F+         L  + + QK L L+K +G+++ DTD R+V+V+DD  Y+++++ S  L  IFMNGRH+ I  IV +Q+++ L  A+RSN D    LKE +      +Y+   G     + F++ F A T ++   V+N+   S      V  Y+A  +  F++G+ A W+YHDE Y S  D+Y  LQ     SRP ++ T SR G  T +V ++G
Sbjct:    4 NFAKFDPKEMTRSPACVAIVGKRGTGKSMLIKDLLYHLNLAGVPRCICFSATEEANSYFGTFLPSVFVHPLD--PDTLDRVWKAQKELVLQKRVGQLNPDTDTRLVLVMDDCAYHKQMMKSATLREIFMNGRHHGIYFIVTLQYLIDLNVAMRSNVDCWFYLKELSHKNQERIYNESCGFLPSFLTFQDLFMASTANYEAFVVNSRCKSNDPQKIVAHYRADANLNFKYGAPALWRYHDEVYESASDKYQRLQRTQQDSRPMSEATRSRKGGNTIIVRRQG 282          
BLAST of mRNA_P-fluviatile_contig22.4932.1 vs. uniprot
Match: A0A6G6XP69_9PHYC (Uncharacterized protein n=1 Tax=Dishui Lake phycodnavirus 4 TaxID=2704072 RepID=A0A6G6XP69_9PHYC)

HSP 1 Score: 176 bits (445), Expect = 5.690e-50
Identity = 104/247 (42.11%), Postives = 144/247 (58.30%), Query Frame = 1
Query:   19 SINVNLKRFDCRAAMAAKCNAVVIGKRNTGKSVIIAELLYYLSKQKVPRACVFSATEESNRFFCRYIPDSFIFDEKNVEGKLIEIVEQQKRLKLRKDIGEIDQDTDLRIVIVLDDMGYNRKVLTSQILTFIFMNGRHYDITLIVAIQHVMQLTPALRSNTDYVVCLKEGNKNVLRNLYDNFFGVFEKPVHFKNAFDACTKDFGCLVLNNTVASVLVNDTVHWYKAT-PDRKFRFGSKAFWKYHDERY 756
            S+N+ L++FD       K   V IGKRNTGKS +I +++YY  K+ +P   V S TEE N F+  +IPD FI++E N E  +  ++ +QK L      G+ +  T     I+LDD  Y+ K L   ++  IFMNGRH+ I  I+++Q+ M L PALR+N DYV  L+E        L+ NFFG+F     F    DACT++F CLVL+NTV S  + D V WY+A  P  KF+ GS  FW  H + Y
Sbjct:    2 SLNLQLRKFDVSKMTDDKI-CVFIGKRNTGKSFLIRDIMYY--KKHIPTGIVQSGTEEGNGFYGTFIPDLFIYNEYNQEA-IERVMARQKALAKA---GKHNNGT----FILLDDCMYDNKFLKDTVMRQIFMNGRHFKIFFILSMQYCMDLPPALRANIDYVFILRENIVANRERLWKNFFGIFPTFELFSKTMDACTENFECLVLDNTVKSNRIEDCVFWYRAKYPPPKFKVGSSQFWAVHKKMY 237          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4932.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP63_ECTSI2.050e-18287.90Adenosinetriphosphatase n=2 Tax=root TaxID=1 RepID... [more]
A0A6H5KKN2_9PHAE8.920e-16787.94SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
B5LWH6_9PHYC1.110e-8445.96Putative VV A32 ATPase n=1 Tax=Feldmannia species ... [more]
Q6XM75_9PHYC3.490e-8349.06FirrV-1-A12 n=1 Tax=Feldmannia irregularis virus a... [more]
A0A836CN20_9STRA2.820e-5937.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z5I5_9STRA3.760e-5938.93Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835Z4N1_9STRA2.600e-5335.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6C0LE87_9ZZZZ5.720e-5140.00Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A835YWY0_9STRA3.190e-5036.30Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A6G6XP69_9PHYC5.690e-5042.11Uncharacterized protein n=1 Tax=Dishui Lake phycod... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig22contigP-fluviatile_contig22:1381337..1382267 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score516.2
Seed ortholog evalue1e-143
Seed eggNOG ortholog2880.D8LP63
EggNOG OGs2E819@1,2SEJ0@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEsV-1-26 nucleoside triphosphate hydrolase
Ec32 orthologEc-06_006490.1
Exons1
Model size931
Cds size852
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815979.0816054-CDS-P-fluviatile_contig22:1381336..13821881622815979.0816054-CDS-P-fluviatile_contig22:1381336..1382188Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 1381337..1382188 +
1693563929.055435-CDS-P-fluviatile_contig22:1381336..13821881693563929.055435-CDS-P-fluviatile_contig22:1381336..1382188Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 1381337..1382188 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815979.0932078-UTR-P-fluviatile_contig22:1382188..13822671622815979.0932078-UTR-P-fluviatile_contig22:1382188..1382267Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 1382189..1382267 +
1693563929.0646293-UTR-P-fluviatile_contig22:1382188..13822671693563929.0646293-UTR-P-fluviatile_contig22:1382188..1382267Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 1382189..1382267 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig22.4932.1prot_P-fluviatile_contig22.4932.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig22 1381337..1382188 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig22.4932.1

>prot_P-fluviatile_contig22.4932.1 ID=prot_P-fluviatile_contig22.4932.1|Name=mRNA_P-fluviatile_contig22.4932.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=284bp
MSASTNSINVNLKRFDCRAAMAAKCNAVVIGKRNTGKSVIIAELLYYLSK
QKVPRACVFSATEESNRFFCRYIPDSFIFDEKNVEGKLIEIVEQQKRLKL
RKDIGEIDQDTDLRIVIVLDDMGYNRKVLTSQILTFIFMNGRHYDITLIV
AIQHVMQLTPALRSNTDYVVCLKEGNKNVLRNLYDNFFGVFEKPVHFKNA
FDACTKDFGCLVLNNTVASVLVNDTVHWYKATPDRKFRFGSKAFWKYHDE
RYVSIQDRYLLQSRPYADTTTSRDGTFVVNKEG*
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mRNA from alignment at P-fluviatile_contig22:1381337..1382267+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig22.4932.1 ID=mRNA_P-fluviatile_contig22.4932.1|Name=mRNA_P-fluviatile_contig22.4932.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=931bp|location=Sequence derived from alignment at P-fluviatile_contig22:1381337..1382267+ (Porterinema fluviatile SAG_2381)
ATGTCCGCTTCAACCAACTCCATAAACGTAAACCTCAAGAGATTTGACTG TAGGGCCGCCATGGCGGCGAAGTGCAACGCCGTGGTGATCGGGAAACGGA ACACTGGCAAGAGCGTGATAATCGCCGAACTTTTGTACTACCTCTCCAAA CAAAAGGTTCCTCGAGCGTGCGTTTTTTCGGCCACGGAAGAAAGTAATCG TTTTTTTTGCAGGTACATCCCTGACTCGTTTATTTTCGACGAGAAGAACG TGGAGGGCAAGTTGATAGAGATTGTCGAGCAGCAAAAGCGCCTCAAGCTT CGGAAAGACATTGGGGAGATAGACCAAGACACGGATTTGCGTATTGTCAT CGTGCTAGACGATATGGGTTACAATCGCAAAGTTCTGACAAGCCAAATAC TCACGTTTATTTTTATGAACGGGCGGCACTACGACATAACGCTCATCGTG GCAATACAGCACGTTATGCAGCTGACTCCCGCACTGAGGAGCAACACGGA CTACGTCGTGTGTCTCAAGGAGGGCAACAAAAACGTGTTGAGAAACCTGT ATGATAATTTTTTCGGCGTGTTTGAAAAGCCTGTACACTTCAAGAATGCT TTTGACGCGTGCACCAAAGACTTTGGGTGTTTGGTGTTGAATAACACCGT GGCGAGCGTTCTGGTGAACGATACGGTCCACTGGTACAAAGCGACACCCG ACAGAAAGTTTAGGTTTGGATCGAAAGCTTTCTGGAAGTACCACGATGAG CGATACGTCTCAATTCAGGACAGGTATCTCCTGCAGAGTAGGCCTTATGC GGACACGACAACGTCCAGAGACGGCACTTTTGTGGTCAACAAAGAAGGCT AGCTTACGCCAGTTATTAATAAAAGACTTCATGTACTCTCTACCCCTCCC CCTTGCTCTTGGGGCGGCTACTGTTCTCCCT
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Coding sequence (CDS) from alignment at P-fluviatile_contig22:1381337..1382267+

>mRNA_P-fluviatile_contig22.4932.1 ID=mRNA_P-fluviatile_contig22.4932.1|Name=mRNA_P-fluviatile_contig22.4932.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1704bp|location=Sequence derived from alignment at P-fluviatile_contig22:1381337..1382267+ (Porterinema fluviatile SAG_2381)
ATGTCCGCTTCAACCAACTCCATAAACGTAAACCTCAAGAGATTTGACTG
TAGGGCCGCCATGGCGGCGAAGTGCAACGCCGTGGTGATCGGGAAACGGA
ACACTGGCAAGAGCGTGATAATCGCCGAACTTTTGTACTACCTCTCCAAA
CAAAAGGTTCCTCGAGCGTGCGTTTTTTCGGCCACGGAAGAAAGTAATCG
TTTTTTTTGCAGGTACATCCCTGACTCGTTTATTTTCGACGAGAAGAACG
TGGAGGGCAAGTTGATAGAGATTGTCGAGCAGCAAAAGCGCCTCAAGCTT
CGGAAAGACATTGGGGAGATAGACCAAGACACGGATTTGCGTATTGTCAT
CGTGCTAGACGATATGGGTTACAATCGCAAAGTTCTGACAAGCCAAATAC
TCACGTTTATTTTTATGAACGGGCGGCACTACGACATAACGCTCATCGTG
GCAATACAGCACGTTATGCAGCTGACTCCCGCACTGAGGAGCAACACGGA
CTACGTCGTGTGTCTCAAGGAGGGCAACAAAAACGTGTTGAGAAACCTGT
ATGATAATTTTTTCGGCGTGTTTGAAAAGCCTGTACACTTCAAGAATGCT
TTTGACGCGTGCACCAAAGACTTTGGGTGTTTGGTGTTGAATAACACCGT
GGCGAGCGTTCTGGTGAACGATACGGTCCACTGGTACAAAGCGACACCCG
ACAGAAAGTTTAGGTTTGGATCGAAAGCTTTCTGGAAGTACCACGATGAG
CGATACGTCTCAATTCAGGACAGGTATCTCCTGCAGAGTAGGCCTTATGC
GGACACGACAACGTCCAGAGACGGCACTTTTGTGGTCAACAAAGAAGGCT
AGATGTCCGCTTCAACCAACTCCATAAACGTAAACCTCAAGAGATTTGAC
TGTAGGGCCGCCATGGCGGCGAAGTGCAACGCCGTGGTGATCGGGAAACG
GAACACTGGCAAGAGCGTGATAATCGCCGAACTTTTGTACTACCTCTCCA
AACAAAAGGTTCCTCGAGCGTGCGTTTTTTCGGCCACGGAAGAAAGTAAT
CGTTTTTTTTGCAGGTACATCCCTGACTCGTTTATTTTCGACGAGAAGAA
CGTGGAGGGCAAGTTGATAGAGATTGTCGAGCAGCAAAAGCGCCTCAAGC
TTCGGAAAGACATTGGGGAGATAGACCAAGACACGGATTTGCGTATTGTC
ATCGTGCTAGACGATATGGGTTACAATCGCAAAGTTCTGACAAGCCAAAT
ACTCACGTTTATTTTTATGAACGGGCGGCACTACGACATAACGCTCATCG
TGGCAATACAGCACGTTATGCAGCTGACTCCCGCACTGAGGAGCAACACG
GACTACGTCGTGTGTCTCAAGGAGGGCAACAAAAACGTGTTGAGAAACCT
GTATGATAATTTTTTCGGCGTGTTTGAAAAGCCTGTACACTTCAAGAATG
CTTTTGACGCGTGCACCAAAGACTTTGGGTGTTTGGTGTTGAATAACACC
GTGGCGAGCGTTCTGGTGAACGATACGGTCCACTGGTACAAAGCGACACC
CGACAGAAAGTTTAGGTTTGGATCGAAAGCTTTCTGGAAGTACCACGATG
AGCGATACGTCTCAATTCAGGACAGGTATCTCCTGCAGAGTAGGCCTTAT
GCGGACACGACAACGTCCAGAGACGGCACTTTTGTGGTCAACAAAGAAGG
CTAG
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