mRNA_P-fluviatile_contig22.4862.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig22.4862.1
Unique NamemRNA_P-fluviatile_contig22.4862.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig22.4862.1 vs. uniprot
Match: D8LPK1_ECTSI (EsV-1-182, RFC small subunit n=2 Tax=root TaxID=1 RepID=D8LPK1_ECTSI)

HSP 1 Score: 392 bits (1008), Expect = 4.830e-134
Identity = 209/323 (64.71%), Postives = 242/323 (74.92%), Query Frame = 1
Query:    1 MTPWVEKHRPKYIGDVVHHDNLGRILKGLERTGDLPHLLFHGPPGTGKTSTILALARTLFGESGFRDRVLELNASDDRGLDVVRRKIKAFSKISVSSCE-----IKLVILDEADTMTPTAQSALRRTMETYSTVTRFCLVCNNVSKIISPLTSRCAKFRFSPLPAASMKSRLLDICESEGLIFRNDSRIILDAIVRSSGGDMRKSVNILQATSTLR-RVSPEAIAEIAGEVPEGVFDDLWSACLARG----CGTVIDAVSRFTDEGYSVNSVIPRIQDLVVSCADVADAAKARIFRRLLEADRRLNDGADEEIQLLDICCFIQ 939
            M PWVEK+RP+ + DVVHHD+L R+LKG E+TGDLPHLLFHGPPGTGKTSTILALARTL GE   R+RVLELNASD+RGLDVVR KIK F K+S+SS +      KLVILDEADTMT  AQSALRRTMET + VTRFCLVCN VSKII+PL SRCAKFRFS L   SMK RLL ICE E +IF N SR +LDAIV+SS GDMR +VN+LQ  S  + RV+PE++ E+AGEVPE  FD LWSA  +         V+DAVS F  EGY V  V+  IQ  VV   ++ +A KA I   L+E DR LNDGADEE+QLL+IC  +Q
Sbjct:    1 MQPWVEKYRPRRVKDVVHHDHLKRVLKGAEKTGDLPHLLFHGPPGTGKTSTILALARTLLGEENMRERVLELNASDERGLDVVRDKIKTFCKMSISSFQPGCPPFKLVILDEADTMTADAQSALRRTMETQAVVTRFCLVCNYVSKIIAPLASRCAKFRFSTLTPESMKGRLLYICERENIIFENCSRGVLDAIVKSSRGDMRSAVNLLQTVSQQQHRVTPESVVEVAGEVPERAFDTLWSAVTSPSHLEHFEDVVDAVSTFVGEGYPVGKVLSEIQSRVVQSGELENADKAVICLELMETDRCLNDGADEELQLLNICLVVQ 323          
BLAST of mRNA_P-fluviatile_contig22.4862.1 vs. uniprot
Match: A0A6H5JEB4_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEB4_9PHAE)

HSP 1 Score: 314 bits (805), Expect = 7.540e-103
Identity = 169/320 (52.81%), Postives = 214/320 (66.88%), Query Frame = 1
Query:    1 MTPWVEKHRPKYIGDVVHHDNLGRILKGLERTGDLPHLLFHGPPGTGKTSTILALARTLFGESGFRDRVLELNASDDRGLDVVRRKIKAFSKISVSSCE---------IKLVILDEADTMTPTAQSALRRTMETYSTVTRFCLVCNNVSKIISPLTSRCAKFRFSPLPAASMKSRLLDICESEGLIFRNDSRIILDAIVRSSGGDMRKSVNILQATSTL---RRVSPEAIAEIAGEVPEGVFDDLWSACLARGCGTVIDAVSRFTDEGYSVNSVIPRIQDLVVSCADVADAAKARIFRRLLEADRRLNDGADEEIQLLDI 924
            + PWVEK+RPK + DV H D +   LKG   TG LPHLLF+GPPGTGKTST+LALARTLFG   +RDR+LELNASD+RG+ VVR KIK F++++V              K++ILDEADTMTP AQSALRRTMETYSTVTRFCL+CN V++II PL SRCAKFRFS L   +M  RL  I   E +    D    L AIV  SGGDMRK+V  +Q+ S       V+PE + +IAG++P  V D LWSA  +     ++ AV  F   GY +++++  +Q+  V+   + D  KA I RR+ EADR L DG +EE+QLLD+
Sbjct:   27 LQPWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVREKIKTFAQVAVGRATHQAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGAMLDRLSYISREEDVKITADG---LQAIVDLSGGDMRKAVTAMQSASQFYAGAEVTPEVLVDIAGKIPAEVKDALWSAIKSGSYHKIVAAVDDFMSSGYPLSTLLEDMQEATVADTTIPDHNKADICRRIAEADRCLIDGCNEELQLLDL 343          
BLAST of mRNA_P-fluviatile_contig22.4862.1 vs. uniprot
Match: A0A7S3NPK0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPK0_9STRA)

HSP 1 Score: 291 bits (746), Expect = 3.200e-94
Identity = 152/317 (47.95%), Postives = 214/317 (67.51%), Query Frame = 1
Query:   10 WVEKHRPKYIGDVVHHDNLGRILKGLERTGDLPHLLFHGPPGTGKTSTILALARTLFGESGFRDRVLELNASDDRGLDVVRRKIKAFSKISVS--------SCEIKLVILDEADTMTPTAQSALRRTMETYSTVTRFCLVCNNVSKIISPLTSRCAKFRFSPLPAASMKSRLLDICESEGLIFRNDSRIILDAIVRSSGGDMRKSVNILQATSTLR----RVSPEAIAEIAGEVPEGVFDDLWSACLARGCGTVIDAVSRFTDEGYSVNSVIPRIQDLVVSCADVADAAKARIFRRLLEADRRLNDGADEEIQLLDI 924
            WVEK+RPK + DV   + + + L G    G LPHLLF+GPPGTGKTSTILA+ R L+ +  +RDRVLE+NASD+RG+ V+R+K+KAF++ +V         S   K++ILDEADTMT  AQ ALRRTMETYS VTRFCLVCN VS+II PL SRCAK+RFSPL   SM++RLL I ++E + + N+   + D I+  S GDMR++VN+LQ+          +SP+A+ E++G++P  +  ++WSA  ++    V + V     EGY   +++ +I D V+  + ++D  KA I  RL +AD+ L DGAD+ +QL D+
Sbjct:    9 WVEKYRPKSVNDVASQEEVVKSLLGAIEQGALPHLLFYGPPGTGKTSTILAMTRMLYHKDVWRDRVLEMNASDERGIKVIRQKVKAFAQRAVGTKTYAGYPSPPFKIIILDEADTMTKDAQGALRRTMETYSNVTRFCLVCNYVSRIIEPLASRCAKYRFSPLDKESMRTRLLSIAQAENVNYPNE---VYDNILDFSQGDMRRAVNLLQSCVNFYGANGTISPDALLEVSGQIPPQIISNVWSALNSKSFAEVANTVDYVIKEGYPALALLTKIHDDVIHSSSISDHNKAVIIERLAQADKALADGADDSLQLHDV 322          
BLAST of mRNA_P-fluviatile_contig22.4862.1 vs. uniprot
Match: A0A1Y1HK96_KLENI (Replication factor C subunit RFC4 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HK96_KLENI)

HSP 1 Score: 286 bits (732), Expect = 5.230e-92
Identity = 156/319 (48.90%), Postives = 213/319 (66.77%), Query Frame = 1
Query:    7 PWVEKHRPKYIGDVVHHDNLGRILKGLERTGDLPHLLFHGPPGTGKTSTILALARTLFGESGFRDRVLELNASDDRGLDVVRRKIKAFSKISVSS------CE-IKLVILDEADTMTPTAQSALRRTMETYSTVTRFCLVCNNVSKIISPLTSRCAKFRFSPLPAASMKSRLLDICESEGLIFRNDSRIILDAIVRSSGGDMRKSVNILQATSTL--RRVSPEAIAEIAGEVPEGVFDDLWSACLA----RGCGTVIDAVSRFTDEGYSVNSVIPRIQDLVVSCADVADAAKARIFRRLLEADRRLNDGADEEIQLLDI 924
            PWVEK+RP+ + DV   + + + L+    TG+LPHLLF+GPPGTGKT+T LA+AR LFG    + RVLELNASDDRG++VVR KIK F+ ++V        C   K++ILDEAD+MT  AQ+ALRRTMETYS VTRFC +CN +S+II PL SRCAKFRF PL    M  R+  IC  EGL   +++   L+ + + SGGDMR+++  LQ+ S L   R+S E I  ++G VP+ V + L ++C +    +  GTV D ++    +GY+V+ ++ ++ D VV   DV D  KARI  R+ EAD+ L DG DE +QLLD+
Sbjct:   11 PWVEKYRPRNVNDVASQEEVVKTLRNSLETGNLPHLLFYGPPGTGKTTTALAIARQLFGPELVKTRVLELNASDDRGINVVRTKIKDFAAVAVGPGVSGYPCPPFKVLILDEADSMTEDAQNALRRTMETYSKVTRFCFICNYISRIIEPLASRCAKFRFKPLGREIMTDRIQYICREEGLSLDDEA---LNTLGKVSGGDMRRAITCLQSASRLFGSRISSENIISVSGVVPDDVIEKLLTSCRSGDYDKAQGTVTDIIA----DGYAVSQILSQLHDEVVRAEDVTDEQKARICERVAEADKCLIDGGDEYLQLLDV 322          
BLAST of mRNA_P-fluviatile_contig22.4862.1 vs. uniprot
Match: A0A7R9YFH1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFH1_9STRA)

HSP 1 Score: 285 bits (730), Expect = 7.630e-92
Identity = 157/313 (50.16%), Postives = 209/313 (66.77%), Query Frame = 1
Query:    4 TPWVEKHRPKYIGDVVHHDNLGRILKGLERTGDLPHLLFHGPPGTGKTSTILALARTLFGESGFRDRVLELNASDDRGLDVVRRKIKAFSKISVSSC---EIKLVILDEADTMTPTAQSALRRTMETYSTVTRFCLVCNNVSKIISPLTSRCAKFRFSPLPAASMKSRLLDICESEGLIFRNDSRIILDAIVRSSGGDMRKSVNILQATSTLRRVSP---EAIAEIAGEVPEGVFDDLWSACLARGCGTVIDAVSRFTDEGYSVNSVIPRIQDLVVSCADVADAAKARIFRRLLEADRRLNDGADEEIQLLDI 924
            TPW+EKHRP  I DV   D + + L    R G +PHLLF+GPPGTGKTSTILA+AR LFG   +R RVLELNASD+RG+ V+R K+K F+  +V +    + K+VILDEADTMT  AQSALRRTMETYS VTRFCLVCN V++II PL SRCAKFRF PLP  SM  RL +I E EG+   ++   +L ++V ++GGDMR +V  LQ+++ L  V+    E I E++G VP+ V +  W A  A+   ++  AV     EG+ ++ ++  +   ++    + D AKAR   +L EA+ R  DGA EE+QLLD+
Sbjct:   13 TPWIEKHRPACIRDVASQDEVVQTLTTAVRVGAIPHLLFYGPPGTGKTSTILAMARDLFGTE-WRKRVLELNASDERGIKVIRDKVKGFAAQAVPADGRPQFKIVILDEADTMTVEAQSALRRTMETYSRVTRFCLVCNYVTRIIEPLASRCAKFRFKPLPPDSMIERLREIAEKEGMQVNDE---LLGSVVNAAGGDMRCAVTTLQSSAALGGVAALEQEEILELSGVVPDAVLEPFWKALEAQSFESLQQAVRDILAEGWPMDGLLKTMLKTLLENTVMQDEAKARFIEKLAEAESRFIDGAGEELQLLDV 321          
BLAST of mRNA_P-fluviatile_contig22.4862.1 vs. uniprot
Match: UPI001E670B49 (replication factor C subunit 4-like n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E670B49)

HSP 1 Score: 286 bits (732), Expect = 8.680e-92
Identity = 153/326 (46.93%), Postives = 210/326 (64.42%), Query Frame = 1
Query:    4 TPWVEKHRPKYIGDVVHHDNLGRILKGLERTGDLPHLLFHGPPGTGKTSTILALARTLFGESGFRDRVLELNASDDRGLDVVRRKIKAFSKISVSSCE--------IKLVILDEADTMTPTAQSALRRTMETYSTVTRFCLVCNNVSKIISPLTSRCAKFRFSPLPAASMKSRLLDICESEGLIFRNDSRIILDAIVRSSGGDMRKSVNILQATSTLR---RVSPEAIAEIAGEVPEGVFDDLWSACLARGCGTVIDAVSRFTDEGYSVNSVIPRIQDLVVSCADVADAAKARIFRRLLEADRRLNDGADEEIQLLDICCFIQENI 948
            TPWVEK+RPK + DV + D +  +LK      DLP+LLF+GPPGTGKTSTILA AR LFG+  F  RVLELNASD+RG+ V+R K+K F++ +VSS           K++ILDEAD+MT  AQ+ALRRTME  S  TRFCL+CN VS+II PLTSRC+KFRF PL    M  RL  ICE E + + +    +L+A V +S GD+R+++  LQ+ + LR   ++  + + EI G VPE   D+L+  CL      + D ++    EG+S + ++ +I D +V+   ++D  KA IF RL   D RL DG DE +++LD+ C I   +
Sbjct:   31 TPWVEKYRPKTVEDVAYQDEVVSVLKSTLMGADLPNLLFYGPPGTGKTSTILAAARQLFGDL-FHQRVLELNASDERGIQVIREKVKRFAQTTVSSTRPDGKPCLPYKIIILDEADSMTNPAQAALRRTMEKQSRTTRFCLICNYVSRIIEPLTSRCSKFRFKPLAHGIMMKRLSYICEEENVKYEDG---VLEAFVETSEGDLRRAITTLQSAARLRSGEKIQQQDVYEITGVVPEKWLDELFEVCLTDSYEKLTDFITLMMMEGFSASQIMNQIHDRIVAHDRLSDLQKAAIFERLAICDHRLMDGGDEYLEVLDLSCTIMTQL 352          
BLAST of mRNA_P-fluviatile_contig22.4862.1 vs. uniprot
Match: A0A6V7QGJ8_ANACO (AAA domain-containing protein n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6V7QGJ8_ANACO)

HSP 1 Score: 285 bits (730), Expect = 1.080e-91
Identity = 151/317 (47.63%), Postives = 210/317 (66.25%), Query Frame = 1
Query:    7 PWVEKHRPKYIGDVVHHDNLGRILKGLERTGDLPHLLFHGPPGTGKTSTILALARTLFGESGFRDRVLELNASDDRGLDVVRRKIKAFSKISVSS--------CE-IKLVILDEADTMTPTAQSALRRTMETYSTVTRFCLVCNNVSKIISPLTSRCAKFRFSPLPAASMKSRLLDICESEGLIFRNDSRIILDAIVRSSGGDMRKSVNILQATSTL--RRVSPEAIAEIAGEVPEGVFDDLWSACLARGCGTVIDAVSRFTDEGYSVNSVIPRIQDLVVSCADVADAAKARIFRRLLEADRRLNDGADEEIQLLDI 924
            PWVEK+RPK + DV H D + R+L     T DLPH+LF+GPPGTGKT+T LA+A  LFG   ++ RVLELNASDDRG++VVR KIK F+ ++V S        C   K++ILDEAD+MT  AQ+ALRRTMETYS VTRF  +CN +S+II PL SRCAKFRF PL    M  R+L IC  EGL   +++   L +I   S GD+R+++  LQ+ + L    +S   +  ++G +P+ V + L++AC +         V+R   EGY V+ +I ++ +++V+  D+ D  KARI ++L EAD+ L DGADE +QL+D+
Sbjct:   10 PWVEKYRPKKVKDVAHQDEVVRVLTNTLETADLPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSKPHQGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSGRILHICNEEGLNLDSEALSTLGSI---SQGDLRRAITYLQSAARLFGSSISSNDLISVSGVIPQDVVESLFTACKSGDFDVANKEVTRIIAEGYPVSQLICQLLEVIVNAEDIQDEQKARICKKLGEADKCLVDGADEYLQLMDV 323          
BLAST of mRNA_P-fluviatile_contig22.4862.1 vs. uniprot
Match: A0A2R6XHI2_MARPO (AAA domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XHI2_MARPO)

HSP 1 Score: 285 bits (728), Expect = 2.390e-91
Identity = 149/316 (47.15%), Postives = 206/316 (65.19%), Query Frame = 1
Query:   10 WVEKHRPKYIGDVVHHDNLGRILKGLERTGDLPHLLFHGPPGTGKTSTILALARTLFGESGFRDRVLELNASDDRGLDVVRRKIKAFSKISVSSCE---------IKLVILDEADTMTPTAQSALRRTMETYSTVTRFCLVCNNVSKIISPLTSRCAKFRFSPLPAASMKSRLLDICESEGLIFRNDSRIILDAIVRSSGGDMRKSVNILQATSTL--RRVSPEAIAEIAGEVPEGVFDDLWSACLARGCGTVIDAVSRFTDEGYSVNSVIPRIQDLVVSCADVADAAKARIFRRLLEADRRLNDGADEEIQLLDI 924
            WVEK+RPK + DV + D + R L     TG+LPHLLF+GPPGTGKTST LALA  LFG   ++ RVLELNASDDRG++VVR KIK F+ I+V +            K++ILDEAD+MT  AQ+ALRRTMETYS VTRFC +CN VS+II PL SRCAK+RF PL    M +R+  +C+ EG+   +++   L  + + SGGD+R+++  LQ+ + L    +S + I  ++G VP+ + D L  AC +         V+    EG+  + ++ ++ D+VV  +D+ D  KARI  R+ E D+ L DGADE +QLLD+
Sbjct:   14 WVEKYRPKQVKDVAYQDEVVRTLTNTLETGNLPHLLFYGPPGTGKTSTALALAHQLFGPVLYKARVLELNASDDRGINVVRTKIKDFAAIAVGNSNAAGDYPCPPFKIIILDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKYRFKPLNEEIMTTRIKFVCQEEGIQLNSEA---LSTLSKVSGGDLRRAITCLQSAARLYGSSISSDNIISVSGVVPDEILDSLLVACKSGQFDKAQGVVTNIIAEGHPASQILSQLFDIVVKASDITDEQKARILERIAETDKALIDGADEFLQLLDV 326          
BLAST of mRNA_P-fluviatile_contig22.4862.1 vs. uniprot
Match: A0A388K568_CHABU (AAA domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K568_CHABU)

HSP 1 Score: 284 bits (727), Expect = 2.710e-91
Identity = 157/317 (49.53%), Postives = 210/317 (66.25%), Query Frame = 1
Query:    7 PWVEKHRPKYIGDVVHHDNLGRILKGLERTGDLPHLLFHGPPGTGKTSTILALARTLFGESGFRDRVLELNASDDRGLDVVRRKIKAFSKISVSS------CE-IKLVILDEADTMTPTAQSALRRTMETYSTVTRFCLVCNNVSKIISPLTSRCAKFRFSPLPAASMKSRLLDICESEGLIFRNDSRIILDAIVRSSGGDMRKSVNILQATSTLRR----VSPEAIAEIAGEVPEGVFDDLWSACLARGCGTVIDAVSRFTDEGYSVNSVIPRIQDLVVSCADVADAAKARIFRRLLEADRRLNDGADEEIQLLDI 924
            PWVEK+RPK + +V + + + R LK    TG+LPHLLF+GPPGTGKTST LA+AR LFG    + RVLELNASDDRG++VVR KIK F+ I+V +      C   KL+ILDEAD+MT  AQ+ALRRTMETY+ VTRFC +CN +S+II PL SRCAKFRF PL +  M  R+  IC+ EGL  + ++   +D + R + GDMR+++  LQ+ S  RR    +  + I  ++G VP+ V  DL + C +        AV+    EGY V+ ++ ++QD  V   D+ D  KARI  R+ EAD+ L DGADE +QLLD+
Sbjct:    8 PWVEKYRPKSVSEVAYQEEVVRTLKNTLETGNLPHLLFYGPPGTGKTSTALAIARQLFGPELIKSRVLELNASDDRGINVVRTKIKDFAAIAVGAGVPGYPCPPFKLLILDEADSMTEDAQNALRRTMETYTKVTRFCFICNYISRIIEPLASRCAKFRFKPLVSDIMVKRISYICDQEGLTLQPEA---MDTLCRIADGDMRRAITSLQSAS--RRYGHCLMKKDILNVSGVVPDEVVADLLTTCKSGVFDRAQAAVTNVAAEGYPVSQILAQMQDRAVVAQDMTDEQKARICLRIAEADKCLIDGADEFLQLLDV 319          
BLAST of mRNA_P-fluviatile_contig22.4862.1 vs. uniprot
Match: A0A1X7VPB9_AMPQE (AAA domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VPB9_AMPQE)

HSP 1 Score: 285 bits (729), Expect = 3.070e-91
Identity = 149/322 (46.27%), Postives = 209/322 (64.91%), Query Frame = 1
Query:    4 TPWVEKHRPKYIGDVVHHDNLGRILKGLERTGDLPHLLFHGPPGTGKTSTILALARTLFGESGFRDRVLELNASDDRGLDVVRRKIKAFSKISVSSCE--------IKLVILDEADTMTPTAQSALRRTMETYSTVTRFCLVCNNVSKIISPLTSRCAKFRFSPLPAASMKSRLLDICESEGLIFRNDSRIILDAIVRSSGGDMRKSVNILQATSTLR---RVSPEAIAEIAGEVPEGVFDDLWSACLARGCGTVIDAVSRFTDEGYSVNSVIPRIQDLVVSCADVADAAKARIFRRLLEADRRLNDGADEEIQLLDICCFI 936
             PWVEK+RPK + DVVH D +  +LK      D P+LLF+GPPGTGKTS ILA+A  LFG   ++ R+LELNASDDRG+ V+R K+K+F++ S S+           K+VILDEAD+MT  AQ+ALRRTME  ST TRFCL+CN +S+II PLTSRC+KFRF PL +A +++RL  IC  E +     +   +D I+ +S GDMRK++  LQ+   L+    V+ + I EIAG VP+ + + L   C +     +  AV  F  EG+    ++ ++ D++++  ++ D  K+ I  ++   DRRL+DGADE +QLLDI  FI
Sbjct:   37 VPWVEKYRPKVVDDVVHQDEVVSVLKKTLTGSDFPNLLFYGPPGTGKTSAILAIAHELFGRDLYKSRILELNASDDRGIQVIRDKVKSFARHSASASRPDGKPCPSFKIVILDEADSMTQAAQAALRRTMEKESTSTRFCLICNYISRIIEPLTSRCSKFRFKPLSSAILRTRLEYICREENVKCNEKA---IDRIIETSDGDMRKAITFLQSGYRLKGDEEVTEKDIMEIAGVVPQSLIEGLLKTCSSNSYDQLETAVKNFVAEGFPAVQIMNQLNDVIITHCELNDLQKSAICEQMAVVDRRLSDGADEYLQLLDISSFI 355          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPK1_ECTSI4.830e-13464.71EsV-1-182, RFC small subunit n=2 Tax=root TaxID=1 ... [more]
A0A6H5JEB4_9PHAE7.540e-10352.81AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S3NPK0_9STRA3.200e-9447.95Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A1Y1HK96_KLENI5.230e-9248.90Replication factor C subunit RFC4 n=1 Tax=Klebsorm... [more]
A0A7R9YFH1_9STRA7.630e-9250.16Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
UPI001E670B498.680e-9246.93replication factor C subunit 4-like n=1 Tax=Procam... [more]
A0A6V7QGJ8_ANACO1.080e-9147.63AAA domain-containing protein n=3 Tax=Ananas comos... [more]
A0A2R6XHI2_MARPO2.390e-9147.15AAA domain-containing protein n=2 Tax=Marchantia p... [more]
A0A388K568_CHABU2.710e-9149.53AAA domain-containing protein n=1 Tax=Chara brauni... [more]
A0A1X7VPB9_AMPQE3.070e-9146.27AAA domain-containing protein n=1 Tax=Amphimedon q... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig22contigP-fluviatile_contig22:1238419..1239381 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeViruses
Seed ortholog score399.8
Seed ortholog evalue1.2e-108
Seed eggNOG ortholog654926.Q8QNA5_ESV1K
GOsGO:0008150,GO:0016032,GO:0019058,GO:0019079,GO:0039686,GO:0039693,GO:0044403,GO:0044419,GO:0051704
EggNOG free text desc.ATPase activity
EggNOG OGs4QAR1@10239,4QUNA@35237
COG Functional cat.S
Best tax leveldsDNA viruses, no RNA stage
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEsV-1-182 replication factor C small subunit
Ec32 orthologEc-06_005100.1
Exons1
Model size963
Cds size963
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815976.4171398-CDS-P-fluviatile_contig22:1238418..12393811622815976.4171398-CDS-P-fluviatile_contig22:1238418..1239381Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 1238419..1239381 +
1693563924.4051147-CDS-P-fluviatile_contig22:1238418..12393811693563924.4051147-CDS-P-fluviatile_contig22:1238418..1239381Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 1238419..1239381 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig22.4862.1prot_P-fluviatile_contig22.4862.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig22 1238419..1239381 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig22.4862.1

>prot_P-fluviatile_contig22.4862.1 ID=prot_P-fluviatile_contig22.4862.1|Name=mRNA_P-fluviatile_contig22.4862.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=321bp
MTPWVEKHRPKYIGDVVHHDNLGRILKGLERTGDLPHLLFHGPPGTGKTS
TILALARTLFGESGFRDRVLELNASDDRGLDVVRRKIKAFSKISVSSCEI
KLVILDEADTMTPTAQSALRRTMETYSTVTRFCLVCNNVSKIISPLTSRC
AKFRFSPLPAASMKSRLLDICESEGLIFRNDSRIILDAIVRSSGGDMRKS
VNILQATSTLRRVSPEAIAEIAGEVPEGVFDDLWSACLARGCGTVIDAVS
RFTDEGYSVNSVIPRIQDLVVSCADVADAAKARIFRRLLEADRRLNDGAD
EEIQLLDICCFIQENIKGTL*
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mRNA from alignment at P-fluviatile_contig22:1238419..1239381+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig22.4862.1 ID=mRNA_P-fluviatile_contig22.4862.1|Name=mRNA_P-fluviatile_contig22.4862.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=963bp|location=Sequence derived from alignment at P-fluviatile_contig22:1238419..1239381+ (Porterinema fluviatile SAG_2381)
ATGACTCCGTGGGTCGAGAAGCACCGTCCGAAGTACATCGGCGACGTGGT GCACCACGACAACCTGGGGCGGATTCTCAAAGGTTTGGAGCGGACGGGCG ACCTCCCTCACCTTCTTTTCCACGGTCCGCCTGGCACGGGCAAGACTTCC ACGATCCTGGCTCTTGCGCGCACCCTTTTCGGGGAATCCGGGTTCCGCGA CCGCGTGCTGGAGCTGAACGCTTCGGACGACCGCGGCCTGGATGTGGTTA GGCGGAAGATCAAGGCATTCTCCAAGATTTCGGTATCTTCTTGCGAGATC AAACTTGTGATTCTAGACGAGGCGGACACGATGACGCCGACCGCGCAATC TGCTCTTCGCCGGACGATGGAGACGTACTCCACTGTGACTCGCTTTTGCC TGGTGTGCAACAACGTTTCTAAGATAATATCTCCGCTGACTTCCCGGTGC GCCAAGTTTCGTTTCAGTCCTCTGCCGGCCGCTTCGATGAAGAGTCGCCT ACTGGACATTTGTGAGAGCGAGGGTCTAATTTTCAGGAACGATAGCAGGA TCATTTTGGACGCTATCGTGCGGAGTTCCGGTGGCGACATGCGGAAGTCG GTCAACATTCTCCAGGCTACATCGACGCTGCGTCGGGTGAGCCCGGAAGC TATTGCCGAGATCGCGGGGGAGGTACCGGAAGGCGTGTTCGACGATCTGT GGTCGGCGTGTTTGGCGCGTGGTTGCGGCACTGTAATAGATGCAGTGTCC CGTTTCACGGACGAAGGGTACTCCGTGAACAGCGTTATTCCGAGGATTCA GGATTTGGTGGTGTCTTGCGCCGACGTGGCTGACGCTGCCAAGGCTCGGA TCTTTCGCCGACTGCTGGAAGCCGACAGGCGCCTTAACGACGGGGCGGAC GAAGAGATCCAGCTGCTGGATATTTGTTGTTTCATTCAGGAGAATATTAA GGGCACACTTTGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig22:1238419..1239381+

>mRNA_P-fluviatile_contig22.4862.1 ID=mRNA_P-fluviatile_contig22.4862.1|Name=mRNA_P-fluviatile_contig22.4862.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1926bp|location=Sequence derived from alignment at P-fluviatile_contig22:1238419..1239381+ (Porterinema fluviatile SAG_2381)
ATGACTCCGTGGGTCGAGAAGCACCGTCCGAAGTACATCGGCGACGTGGT
GCACCACGACAACCTGGGGCGGATTCTCAAAGGTTTGGAGCGGACGGGCG
ACCTCCCTCACCTTCTTTTCCACGGTCCGCCTGGCACGGGCAAGACTTCC
ACGATCCTGGCTCTTGCGCGCACCCTTTTCGGGGAATCCGGGTTCCGCGA
CCGCGTGCTGGAGCTGAACGCTTCGGACGACCGCGGCCTGGATGTGGTTA
GGCGGAAGATCAAGGCATTCTCCAAGATTTCGGTATCTTCTTGCGAGATC
AAACTTGTGATTCTAGACGAGGCGGACACGATGACGCCGACCGCGCAATC
TGCTCTTCGCCGGACGATGGAGACGTACTCCACTGTGACTCGCTTTTGCC
TGGTGTGCAACAACGTTTCTAAGATAATATCTCCGCTGACTTCCCGGTGC
GCCAAGTTTCGTTTCAGTCCTCTGCCGGCCGCTTCGATGAAGAGTCGCCT
ACTGGACATTTGTGAGAGCGAGGGTCTAATTTTCAGGAACGATAGCAGGA
TCATTTTGGACGCTATCGTGCGGAGTTCCGGTGGCGACATGCGGAAGTCG
GTCAACATTCTCCAGGCTACATCGACGCTGCGTCGGGTGAGCCCGGAAGC
TATTGCCGAGATCGCGGGGGAGGTACCGGAAGGCGTGTTCGACGATCTGT
GGTCGGCGTGTTTGGCGCGTGGTTGCGGCACTGTAATAGATGCAGTGTCC
CGTTTCACGGACGAAGGGTACTCCGTGAACAGCGTTATTCCGAGGATTCA
GGATTTGGTGGTGTCTTGCGCCGACGTGGCTGACGCTGCCAAGGCTCGGA
TCTTTCGCCGACTGCTGGAAGCCGACAGGCGCCTTAACGACGGGGCGGAC
GAAGAGATCCAGCTGCTGGATATTTGTTGTTTCATTCAGGAGAATATTAA
GGGCACACTTTGAATGACTCCGTGGGTCGAGAAGCACCGTCCGAAGTACA
TCGGCGACGTGGTGCACCACGACAACCTGGGGCGGATTCTCAAAGGTTTG
GAGCGGACGGGCGACCTCCCTCACCTTCTTTTCCACGGTCCGCCTGGCAC
GGGCAAGACTTCCACGATCCTGGCTCTTGCGCGCACCCTTTTCGGGGAAT
CCGGGTTCCGCGACCGCGTGCTGGAGCTGAACGCTTCGGACGACCGCGGC
CTGGATGTGGTTAGGCGGAAGATCAAGGCATTCTCCAAGATTTCGGTATC
TTCTTGCGAGATCAAACTTGTGATTCTAGACGAGGCGGACACGATGACGC
CGACCGCGCAATCTGCTCTTCGCCGGACGATGGAGACGTACTCCACTGTG
ACTCGCTTTTGCCTGGTGTGCAACAACGTTTCTAAGATAATATCTCCGCT
GACTTCCCGGTGCGCCAAGTTTCGTTTCAGTCCTCTGCCGGCCGCTTCGA
TGAAGAGTCGCCTACTGGACATTTGTGAGAGCGAGGGTCTAATTTTCAGG
AACGATAGCAGGATCATTTTGGACGCTATCGTGCGGAGTTCCGGTGGCGA
CATGCGGAAGTCGGTCAACATTCTCCAGGCTACATCGACGCTGCGTCGGG
TGAGCCCGGAAGCTATTGCCGAGATCGCGGGGGAGGTACCGGAAGGCGTG
TTCGACGATCTGTGGTCGGCGTGTTTGGCGCGTGGTTGCGGCACTGTAAT
AGATGCAGTGTCCCGTTTCACGGACGAAGGGTACTCCGTGAACAGCGTTA
TTCCGAGGATTCAGGATTTGGTGGTGTCTTGCGCCGACGTGGCTGACGCT
GCCAAGGCTCGGATCTTTCGCCGACTGCTGGAAGCCGACAGGCGCCTTAA
CGACGGGGCGGACGAAGAGATCCAGCTGCTGGATATTTGTTGTTTCATTC
AGGAGAATATTAAGGGCACACTTTGA
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