mRNA_P-fluviatile_contig22.4852.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig22.4852.1
Unique NamemRNA_P-fluviatile_contig22.4852.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig22.4852.1 vs. uniprot
Match: Q8QN66_ESV1K (EsV-1-224 n=2 Tax=root TaxID=1 RepID=Q8QN66_ESV1K)

HSP 1 Score: 288 bits (737), Expect = 4.290e-93
Identity = 161/320 (50.31%), Postives = 210/320 (65.62%), Query Frame = 1
Query:    1 WIEKYRPRALEDVRGNADVVRALLSYKTPAELPHLLLHGPPGAGKTSAILAIARSFYGDTGCSSMVLELNASDYRGVGTVRNEIECFTRCSFVAEAGGKTLAKMVILDEADSLTHLSQCALRSLIDRSGDRVRFCLCCNFISKLSKGLVSRCTSFRFSTIAKSELLCTTRTVAKKEGLSISEDCLDTVVKLSHGDARRAINLLQSVSLSVYNDLL---HQSIYGYCGVPEPAEIGALLESLLNKSFTEAYHELHDLVFGNHCSLAHIITLLAEQLVAREHSRLGV-----VLSHLADVESCLSEGGSEALGVAAVTSAFH 936
            W EK+RP  L+DV GN  V+RAL S+ +    P+++LHGPPG+GKTS+I+++A+SF+G T  S M LELNA D R +GT+R++I  FTRCS V +     L K+VILDEAD LT  +Q ALR LI+ +  R RFCLCCN+IS+LS GL SRCTSF FS I   +L  T R VA+KE L ISE+ L+ VVK+  GDAR+ INLLQS+SL     L+    Q++Y  CG+P P++   + E LLN+SF+  Y  L   V     SL  +I  L E +++     +GV     VLS LADVE CLS GGSE + V A+  AFH
Sbjct:    4 WTEKHRPTRLQDVSGNDHVIRALQSFTSMETTPNMILHGPPGSGKTSSIISMAKSFFGRTNISIMTLELNAGDSRSIGTMRDQIHFFTRCSSVTDRSTNAL-KLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYISRLSSGLRSRCTSFSFSGIGNVQLAHTLREVARKEDLEISEEGLNAVVKVCAGDARQGINLLQSLSLGDATTLVVRDDQAVYATCGLPSPSQTSEIFEVLLNQSFSVGYTTLTSFVELYQFSLLQMIPPLVESIISCSDKDIGVDTVGEVLSTLADVERCLSNGGSEGIAVGAMVGAFH 322          
BLAST of mRNA_P-fluviatile_contig22.4852.1 vs. uniprot
Match: A0A6H5KU33_9PHAE (MEP9 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU33_9PHAE)

HSP 1 Score: 280 bits (716), Expect = 6.420e-84
Identity = 156/317 (49.21%), Postives = 211/317 (66.56%), Query Frame = 1
Query:    1 WIEKYRPRALEDVRGNADVVRALLSYKTPAELPHLLLHGPPGAGKTSAILAIARSFYGDTGCSSMVLELNASDYRGVGTVRNEIECFTRCSFVAEAGGKTLAKMVILDEADSLTHLSQCALRSLIDRSGDRVRFCLCCNFISKLSKGLVSRCTSFRFSTIAKSELLCTTRTVAKKEGLSISEDCLDTVVKLSHGDARRAINLLQSVSLSVYNDLL---HQSIYGYCGVPEPAEIGALLESLLNKSFTEAYHELHDLVFGNHCSLAHIITLLAEQLVAREHSRLGV-----VLSHLADVESCLSEGGSEALGVAAVTS 927
            W EK+RP  L+DV GN  V+RAL ++K+    P+L+LHGPPG+GKTS+IL++A+SF+G T  S+M LELNA D R +GT+R++I  FTRCS V++     L K+VILDEAD LT  +Q ALR LI+ +  R RFCLCCN+I++LS GL SRCTSF FS I   +L  T R VA KE L ISE+ L+ VV +  GDAR+ INLLQS+SL     L     Q++Y  CG+P P++   + + LLN+SF+  Y  L  L+     SL  +I  L E +++    ++GV     VLS LADVE CL++GGSE + V A+ +
Sbjct:    4 WTEKHRPTRLQDVSGNDQVIRALQTFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQINFFTRCSSVSDKSTNAL-KLVILDEADGLTSCAQRALRHLIETTCGRARFCLCCNYINRLSSGLRSRCTSFSFSGIGNVQLARTLRKVAHKERLEISEEGLNAVVNVCAGDARQGINLLQSLSLGHATTLTARDDQAVYTTCGLPSPSQTSEIFDVLLNQSFSVGYTTLMSLIDLCQFSLTQMIPRLVESIISCGDEKMGVDRVGEVLSTLADVERCLTDGGSEGIAVGAMAN 319          
BLAST of mRNA_P-fluviatile_contig22.4852.1 vs. uniprot
Match: A0A7E4ZQQ8_PANRE (AAA domain-containing protein n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4ZQQ8_PANRE)

HSP 1 Score: 219 bits (557), Expect = 1.040e-65
Identity = 123/314 (39.17%), Postives = 194/314 (61.78%), Query Frame = 1
Query:    1 WIEKYRPRALEDVRGNADVVRALLSYKTPAELPHLLLHGPPGAGKTSAILAIARSFYGDTGCSSMVLELNASDYRGVGTVRNEIECFTRCSFVA-EAGGKTLAKMVILDEADSLTHLSQCALRSLIDRSGDRVRFCLCCNFISKLSKGLVSRCTSFRFSTIAKSELLCTTRTVAKKEGLSISEDCLDTVVKLSHGDARRAINLLQSVSLSVYNDLLHQSIYGYCGVPEPAEIGALLESLLNKSFTEAYHELHDLVFGNHCSLAHIITLLAEQLVAREHSRLGV--VLSHLADVESCLSEGGSEALGVAAVTSAF 933
            W+EKYRP  L D+  + +++  L  +    +LPHLL +GPPG GKTS ILA AR  Y      SMVLELNASD RG+G VR EI  F +   +  +A GK   K++ILDEAD++T  +Q ALR +I++  D VRFC+ CN++SK+   L SRCT FRF+ ++K ++L     V   E L+++E   D +  LS GD RR +N+LQS +L+ ++ +   ++Y   G P P +I  +L++LL+ +F +A+  L++L   +  +L  +I  + +++++ +     V  ++  LA ++S L+ G SE L + A+ S+F
Sbjct:   15 WVEKYRPSTLSDLVSHQEIINTLNKFVDSNQLPHLLFYGPPGTGKTSTILAAARQIYTAKQYRSMVLELNASDDRGIGIVREEIVSFAQSRMLHYDADGKASYKLIILDEADAMTKDAQNALRRVIEKFTDNVRFCIICNYLSKIIPALQSRCTRFRFAPLSKDQVLPRLNHVIAAENLTVTETGKDALFALSGGDMRRVLNVLQSTALA-FDTVNEDNVYSCVGQPRPKDITLILKTLLDGTFDDAFKSLNELRISSGIALTDVIDNVLDKVISMKIKAEAVCGLVDALATIQSRLATGCSEKLQLLALVSSF 327          
BLAST of mRNA_P-fluviatile_contig22.4852.1 vs. uniprot
Match: A0A7S3GM64_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GM64_9EUKA)

HSP 1 Score: 218 bits (556), Expect = 1.070e-65
Identity = 123/313 (39.30%), Postives = 187/313 (59.74%), Query Frame = 1
Query:    1 WIEKYRPRALEDVRGNADVVRALLSYKTPAELPHLLLHGPPGAGKTSAILAIARSFYGDTGCSSMVLELNASDYRGVGTVRNEIECFTRCSFVAEAGGKTLAKMVILDEADSLTHLSQCALRSLIDRSGDRVRFCLCCNFISKLSKGLVSRCTSFRFSTIAKSELLCTTRTVAKKEGLSISEDCLDTVVKLSHGDARRAINLLQSVSLSVYNDLLHQSIYGYCGVPEPAEIGALLESLLNKSFTEAYHELHDLVFGNHCSLAHIITLLAEQLV--AREHSRLGVVLSHLADVESCLSEGGSEALGVAAVTSAF 933
            W+EK+RP  LE++  +A++++ L  +     LPHLL HGPPG GKT+AI A+AR  YG     SMVLELNASD RG+GTV+N I+ F     +  +G     KM+ILDEAD++T ++Q ALR ++++     RFCL  N+++K+   L SRCT+FRF  + K E+L   + +A  E + + E  L  +V LS+GD R A+NLLQ+ +LS   D+    +Y   G P P+++  +L +L+N +F++    L  +V  N  +L  II      L+  A   + LG +LS L+D++  ++ G  E   + A   AF
Sbjct:   14 WVEKHRPSKLEELASHAEILKTLTKFVDEDRLPHLLFHGPPGTGKTTAIQAVARRIYGAK-YKSMVLELNASDERGIGTVQNVIKEFASTKKIFSSG----FKMIILDEADNMTSIAQFALRRIMEKYTQNTRFCLIGNYMNKIIPALQSRCTAFRFPPLKKEEMLTKLQAIADAEKVKLEEAGLTAIVTLSNGDMRSAVNLLQASALSNDFDVKELGVYRTAGAPSPSDVRTVLGTLMNGTFSQGRDILMKVVENNGIALRDIIEAFHSYLLRLALSSNALGFLLSKLSDIQETIAAGAHEKTAILATVGAF 321          
BLAST of mRNA_P-fluviatile_contig22.4852.1 vs. uniprot
Match: C1C1X9_CALCM (Replication factor C subunit 5 n=1 Tax=Caligus clemensi TaxID=344056 RepID=C1C1X9_CALCM)

HSP 1 Score: 217 bits (553), Expect = 4.240e-65
Identity = 129/316 (40.82%), Postives = 188/316 (59.49%), Query Frame = 1
Query:    1 WIEKYRPRALEDVRGNADVVRALLSYKTPAELPHLLLHGPPGAGKTSAILAIARSFYGDTGCSSMVLELNASDYRGVGTVRNEIECFTRCSFVAEAGGKTLAKMVILDEADSLTHLSQCALRSLIDRSGDRVRFCLCCNFISKLSKGLVSRCTSFRFSTIAKSELLCTTRTVAKKEGLSISEDCLDTVVKLSHGDARRAINLLQSVSLSVYNDLLHQSIYGYCGVPEPAEIGALLESLLNKSFTEAYHELH-DLVFGNHCSLAHIIT---LLAEQLVAREHSRLGVVLSHLADVESCLSEGGSEALGVAAVTSAFH 936
            W+EKYRP+ L D+  + D+V  +  +   + +PH+L +GPPG GKTSAILA +R  +G+T  SS VLELNASD RG+   R  I  F     +A   G    K++ILDEAD++T+ +Q ALR +I++  D VRFCL CN++SK+   L SRCT FRF+ +A  ++L   + V K+E L +S D    ++ L+ GD RR +N+LQS S++ +  +   +IY   G P P++I   LESLLN    +AY  +H  L      SL  I+T   LL  +L      ++ +++  LAD E  L  G SE + + AV +AF 
Sbjct:   17 WVEKYRPKDLSDLVSHEDIVGTIRRFVKESRMPHMLFYGPPGTGKTSAILAASREVFGETSNSS-VLELNASDDRGIDVARGRILNFASTKRIAIQAGTASFKLIILDEADAMTNDAQNALRRIIEKFTDNVRFCLICNYLSKIIPALQSRCTRFRFAPLASEQILPRLQAVVKEESLEMSPDGAKALLTLAKGDMRRILNILQSCSMA-FPVINESNIYACTGHPPPSDISLALESLLNDDLQKAYQTIHVQLQTTKGLSLIDILTELHLLVHRLEISNRVKVKLLIK-LADAEHRLLSGTSEKIQLGAVVAAFR 329          
BLAST of mRNA_P-fluviatile_contig22.4852.1 vs. uniprot
Match: UPI001EE54339 (replication factor C subunit 5-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE54339)

HSP 1 Score: 216 bits (550), Expect = 8.710e-65
Identity = 120/315 (38.10%), Postives = 196/315 (62.22%), Query Frame = 1
Query:    1 WIEKYRPRALEDVRGNADVVRALLSYKTPAELPHLLLHGPPGAGKTSAILAIARSFYGDTGCSSMVLELNASDYRGVGTVRNEIECFTRCSFVAEAGGKTLAKMVILDEADSLTHLSQCALRSLIDRSGDRVRFCLCCNFISKLSKGLVSRCTSFRFSTIAKSELLCTTRTVAKKEGLSISEDCLDTVVKLSHGDARRAINLLQSVSLSVYNDLLHQSIYGYCGVPEPAEIGALLESLLNKSFTEAYHELHDLVFGNHCSLAHIITLLAEQLVARE---HSRLGVVLSHLADVESCLSEGGSEALGVAAVTSAFH 936
            W+E+YRP+ LED+  +AD++  +  +     LPHLL +GPPG GKTS ILA+A+  Y     +SMVLELNASD RG+G VRN+I  F     + ++G     K+VILDEAD++T  +Q ALR +I++  +  RFC+ CN++SK+   L SRCT FRF  ++  +++     V  +EG++++ED +  VV L+ GD R+++N+LQS S++ Y ++   ++Y   G P   +I  ++  +LN++FT AY+ +  L      +L  I+T + + +   +   H R+  +L  LAD+E  L+ G SE + ++++ +AF 
Sbjct:   15 WVERYRPKKLEDLISHADIINTIERFVAEERLPHLLFYGPPGTGKTSTILAVAKQIYSPKEFNSMVLELNASDDRGIGIVRNQILSFASTRTIFKSG----FKIVILDEADAMTRDAQNALRRVIEKFTENTRFCIICNYLSKIIPALQSRCTRFRFGPLSTHQMVPRLEHVIAQEGINVTEDGMKAVVTLATGDMRKSLNILQSASMA-YEEVNEDNVYTCVGHPLRRDIENIVNWVLNENFTAAYNNISHLKVAKGLALQDILTEVHQYVHLVDLPIHVRV-YLLEKLADIEYRLASGTSEKIQLSSMIAAFQ 323          
BLAST of mRNA_P-fluviatile_contig22.4852.1 vs. uniprot
Match: A0A7H9HT06_9SACH (AAA domain-containing protein n=2 Tax=Torulaspora TaxID=4948 RepID=A0A7H9HT06_9SACH)

HSP 1 Score: 216 bits (550), Expect = 9.770e-65
Identity = 124/315 (39.37%), Postives = 186/315 (59.05%), Query Frame = 1
Query:    1 WIEKYRPRALEDVRGNADVVRALLSYKTPAELPHLLLHGPPGAGKTSAILAIARSFYGDTGCSSMVLELNASDYRGVGTVRNEIECFTRCSFVAEAGGKTLAKMVILDEADSLTHLSQCALRSLIDRSGDRVRFCLCCNFISKLSKGLVSRCTSFRFSTIAKSELLCTTRTVAKKEGLSISEDCLDTVVKLSHGDARRAINLLQSVSLSVYN----DLLHQSIYGYCGVPEPAEIGALLESLLNKSFTEAYHELHDLVFGNHCSLAHIITLLAEQLVARE----HSRLGVVLSHLADVESCLSEGGSEALGVAAV 921
            W+EKYRP  L+DV G  +VV  +  +    +LPHLL +GPPG GKTS ++A+AR  YG    S+MVLELNASD RG+  VRN+I+ F     +   G     K+V+LDEAD++T+ +Q ALR +I+R     RFC+  N+  KL+  L+SRCT FRF  + K  L      V   E L ISE   D ++KLS GD RR +N+LQ+   ++ +    ++   ++Y  CG P P+++  +L S+LN  +T AY+ L+ L      +L  +I    E L   E     +R+ + L+ L+D+E  +S+GG++ +  +AV
Sbjct:   15 WVEKYRPNTLDDVCGQDEVVTTVRKFVKEGQLPHLLFYGPPGTGKTSTVVALAREIYGKN-YSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSRG----FKLVVLDEADAMTNAAQNALRRIIERYTKNTRFCILANYAHKLTPALLSRCTRFRFQPLPKEALERRMNRVLVSERLKISEKAQDALLKLSRGDMRRVLNVLQACQATLDDPHEQEVTEDTVYDCCGAPRPSDLETILSSILNDDWTTAYYTLNKLSSAKGLALIDLIEGFVEILEGYEMQVQEARISI-LTQLSDIEYAISKGGNDRIQGSAV 323          
BLAST of mRNA_P-fluviatile_contig22.4852.1 vs. uniprot
Match: A0A3B3HT69_ORYLA (Replication factor C subunit 5 n=31 Tax=Clupeocephala TaxID=186625 RepID=A0A3B3HT69_ORYLA)

HSP 1 Score: 216 bits (549), Expect = 1.270e-64
Identity = 127/315 (40.32%), Postives = 189/315 (60.00%), Query Frame = 1
Query:    1 WIEKYRPRALEDVRGNADVVRALLSYKTPAELPHLLLHGPPGAGKTSAILAIARSFYGDTGCSSMVLELNASDYRGVGTVRNEIECFTRCSFVAEAGGKTLAKMVILDEADSLTHLSQCALRSLIDRSGDRVRFCLCCNFISKLSKGLVSRCTSFRFSTIAKSELLCTTRTVAKKEGLSISEDCLDTVVKLSHGDARRAINLLQSVSLSVYNDLLHQSIYGYCGVPEPAEIGALLESLLNKSFTEAYHELHDLVFGNHCSLAHIIT---LLAEQLVAREHSRLGVVLSHLADVESCLSEGGSEALGVAAVTSAFH 936
            W+EKYRP+ L+D+  + D++  +  +     LPHLLL+GPPG GKTS ILA AR  Y D   +SMVLELNASD RG+  VR  I  F     + + G     K+VILDEAD++T  +Q ALR +I++  +  RFCL CN++SK+   L SRCT FRF  ++  +++   R V ++E + I+ED +  +V LS GD RR++N+LQS S++ Y  +   S+Y   G P  ++I  +L+  LNK FT AY ++  L      +L  I+T   LL  ++     +R+  +L  LADVE  L+ G  E + ++++  AF 
Sbjct:   16 WVEKYRPQKLDDLISHRDILSTIQRFVREDRLPHLLLYGPPGTGKTSTILACARQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKG----FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSADQMIPRLRHVIQEESIDITEDGMKAIVTLSSGDMRRSLNVLQSTSMA-YGKVTEDSVYTCTGQPLRSDIANILDWCLNKDFTSAYKQILQLKTLKGLALHDILTELHLLVHRVDFPPATRM-TLLVKLADVEHRLASGTDEKIQLSSMVGAFQ 324          
BLAST of mRNA_P-fluviatile_contig22.4852.1 vs. uniprot
Match: UPI001E664560 (replication factor C subunit 5 n=3 Tax=Papilio TaxID=7145 RepID=UPI001E664560)

HSP 1 Score: 216 bits (549), Expect = 1.270e-64
Identity = 126/316 (39.87%), Postives = 192/316 (60.76%), Query Frame = 1
Query:    1 WIEKYRPRALEDVRGNADVVRALLSYKTPAELPHLLLHGPPGAGKTSAILAIARSFYGDTGCSSMVLELNASDYRGVGTVRNEIECFTRCSFVAEAGGKTLAKMVILDEADSLTHLSQCALRSLIDRSGDRVRFCLCCNFISKLSKGLVSRCTSFRFSTIAKSELLCTTRTVAKKEGLSISEDCLDTVVKLSHGDARRAINLLQSVSLSVYNDLLHQSIYGYCGVPEPAEIGALLESLLNKS-FTEAYHELHDLVFGNHCSLAHIITLLAEQL--VAREHSRLGVVLSHLADVESCLSEGGSEALGVAAVTSAFHF 939
            W+EKYRP  LED+  + D+++ +  +    +LPHLL +GPPG GKTS ILA A+  Y     +SMVLELNASD RG+G VR +I  F     + +AG     K++ILDEAD++T+ +Q ALR +I++  D VRFC+ CN++ K+   L SRCT FRF+ +  S+++   R + +KE + ISED +  +++LS GD R+ +N LQS  LS   D+   ++Y   G P  A+I ++L  L+N+  F   +  + DL      +L  I+T +  ++  V      L  +L  +AD E+ L+ G SE + +AA+ +AFHF
Sbjct:   12 WVEKYRPSKLEDLVSHDDIIKTIGQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFNSMVLELNASDDRGIGIVRGQILSFASTRTIFKAG----PKLIILDEADAMTNDAQNALRRIIEKYTDNVRFCIICNYLGKIIPALQSRCTRFRFAPLQHSQIVPRLRDIVEKENVKISEDGIQALLELSGGDMRKVLNTLQSTWLSA-RDVTEDTVYTCVGHPLRADIDSILTRLMNEDDFGVCFKFIQDLKILKGLALGDILTEIHTKIQRVKFPPDVLISLLIKMADSEARLASGCSERIELAALIAAFHF 322          
BLAST of mRNA_P-fluviatile_contig22.4852.1 vs. uniprot
Match: H2Y0R2_CIOIN (Replication factor C subunit 5 n=2 Tax=Ciona intestinalis TaxID=7719 RepID=H2Y0R2_CIOIN)

HSP 1 Score: 215 bits (548), Expect = 1.500e-64
Identity = 122/315 (38.73%), Postives = 188/315 (59.68%), Query Frame = 1
Query:    1 WIEKYRPRALEDVRGNADVVRALLSYKTPAELPHLLLHGPPGAGKTSAILAIARSFYGDTGCSSMVLELNASDYRGVGTVRNEIECFTRCSFVAEAGGKTLAKMVILDEADSLTHLSQCALRSLIDRSGDRVRFCLCCNFISKLSKGLVSRCTSFRFSTIAKSELLCTTRTVAKKEGLSISEDCLDTVVKLSHGDARRAINLLQSVSLSVYNDLLHQSIYGYCGVPEPAEIGALLESLLNKSFTEAYHELHDLVFGNHCSLAHIITLLAEQLVAREHSRLGV---VLSHLADVESCLSEGGSEALGVAAVTSAFH 936
            W+EKYRP +L+D+  + D++  +  +     LPHLL +GPPG GKTS ILA AR  Y  T  +SMVLELNASD RG+G VRN+I  F     +   G     K++ILDEAD++T  +Q ALR ++++  +  RFCL CN+++K+   + SRCT FRF  +   ++      + K E L+++ED L+ +V L++GD R+A+N+LQS S++ YN++    +Y   G P   +I  +++ +LN+ +T AY  + +L      +L  II  +    V   H  + V   +L  LAD+E  L+ G SE L + ++ SAF 
Sbjct:   12 WVEKYRPESLDDLISHEDILSTISGFLAQNRLPHLLFYGPPGTGKTSTILACARKLYSTTQFNSMVLELNASDDRGIGVVRNQILSFASTRTIFNKG----FKLIILDEADAMTKDAQNALRRVMEKFMENTRFCLICNYLTKIIPAIQSRCTRFRFGPLTTDKISSRLEYIIKVEQLNVTEDGLNALVTLANGDMRKALNILQSSSMA-YNEVDEDGVYKCTGRPRRDDIKKIMKWMLNEDYTTAYRSIMELNMTTSMALQDIIEQI-HLFVHEVHFPVAVRIYLLDKLADIEHRLASGTSEKLQLGSLVSAFQ 320          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4852.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QN66_ESV1K4.290e-9350.31EsV-1-224 n=2 Tax=root TaxID=1 RepID=Q8QN66_ESV1K[more]
A0A6H5KU33_9PHAE6.420e-8449.21MEP9 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A7E4ZQQ8_PANRE1.040e-6539.17AAA domain-containing protein n=1 Tax=Panagrellus ... [more]
A0A7S3GM64_9EUKA1.070e-6539.30Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
C1C1X9_CALCM4.240e-6540.82Replication factor C subunit 5 n=1 Tax=Caligus cle... [more]
UPI001EE543398.710e-6538.10replication factor C subunit 5-like n=2 Tax=Haliot... [more]
A0A7H9HT06_9SACH9.770e-6539.37AAA domain-containing protein n=2 Tax=Torulaspora ... [more]
A0A3B3HT69_ORYLA1.270e-6440.32Replication factor C subunit 5 n=31 Tax=Clupeoceph... [more]
UPI001E6645601.270e-6439.87replication factor C subunit 5 n=3 Tax=Papilio Tax... [more]
H2Y0R2_CIOIN1.500e-6438.73Replication factor C subunit 5 n=2 Tax=Ciona intes... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig22contigP-fluviatile_contig22:1209948..1210889 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score293.5
Seed ortholog evalue1.2e-76
Seed eggNOG ortholog2880.D8LP38
KEGG koko:K10756
KEGG Pathwayko03030,ko03420,ko03430,map03030,map03420,map03430
KEGG ModuleM00289,M00295
EggNOG free text desc.DNA replication
EggNOG OGsCOG0470@1,KOG0990@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03032,ko03036,ko03400
Hectar predicted targeting categoryother localisation
Exons1
Model size942
Cds size942
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815975.9886308-CDS-P-fluviatile_contig22:1209947..12108891622815975.9886308-CDS-P-fluviatile_contig22:1209947..1210889Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 1209948..1210889 +
1693563923.9885645-CDS-P-fluviatile_contig22:1209947..12108891693563923.9885645-CDS-P-fluviatile_contig22:1209947..1210889Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 1209948..1210889 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig22.4852.1prot_P-fluviatile_contig22.4852.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig22 1209948..1210889 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig22.4852.1

>prot_P-fluviatile_contig22.4852.1 ID=prot_P-fluviatile_contig22.4852.1|Name=mRNA_P-fluviatile_contig22.4852.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=314bp
WIEKYRPRALEDVRGNADVVRALLSYKTPAELPHLLLHGPPGAGKTSAIL
AIARSFYGDTGCSSMVLELNASDYRGVGTVRNEIECFTRCSFVAEAGGKT
LAKMVILDEADSLTHLSQCALRSLIDRSGDRVRFCLCCNFISKLSKGLVS
RCTSFRFSTIAKSELLCTTRTVAKKEGLSISEDCLDTVVKLSHGDARRAI
NLLQSVSLSVYNDLLHQSIYGYCGVPEPAEIGALLESLLNKSFTEAYHEL
HDLVFGNHCSLAHIITLLAEQLVAREHSRLGVVLSHLADVESCLSEGGSE
ALGVAAVTSAFHF*
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mRNA from alignment at P-fluviatile_contig22:1209948..1210889+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig22.4852.1 ID=mRNA_P-fluviatile_contig22.4852.1|Name=mRNA_P-fluviatile_contig22.4852.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=942bp|location=Sequence derived from alignment at P-fluviatile_contig22:1209948..1210889+ (Porterinema fluviatile SAG_2381)
TGGATAGAGAAGTACCGCCCGCGGGCGTTGGAAGATGTTCGGGGGAACGC TGACGTGGTACGAGCGCTGCTGTCTTACAAGACACCGGCCGAGCTTCCCC ACTTGCTGCTTCACGGGCCTCCGGGGGCGGGAAAGACGTCAGCCATTCTC GCTATCGCGCGAAGCTTTTACGGCGACACCGGTTGCTCCTCCATGGTCCT CGAACTGAACGCCAGCGACTACCGGGGAGTAGGCACCGTGAGAAACGAAA TCGAGTGTTTCACGCGGTGCTCGTTCGTGGCGGAGGCGGGGGGGAAGACG TTGGCCAAGATGGTTATTCTGGATGAGGCGGACAGCCTGACGCACTTATC GCAGTGCGCTCTGCGGAGCCTGATCGATCGGTCGGGGGATAGGGTTCGTT TTTGTCTGTGTTGCAACTTCATCAGCAAGCTGTCCAAGGGCTTGGTTTCG CGGTGCACTTCTTTCCGCTTTTCGACCATTGCGAAGTCGGAGTTGTTGTG CACCACGCGGACGGTTGCGAAAAAAGAGGGCTTGTCTATCTCGGAAGATT GTTTGGACACGGTGGTGAAGCTTTCCCACGGCGACGCTCGTCGGGCGATC AATCTGCTGCAGAGCGTGAGCTTGAGTGTGTATAATGATCTCTTGCACCA ATCCATCTACGGTTACTGCGGTGTCCCCGAGCCGGCTGAGATCGGTGCAC TGCTCGAGTCTCTGCTCAACAAGTCGTTTACTGAGGCGTATCACGAGCTA CACGATCTCGTTTTTGGGAACCACTGTTCATTGGCCCACATCATTACCCT TTTGGCCGAGCAACTCGTCGCGCGTGAACACAGCCGACTTGGGGTGGTGT TGTCACACCTCGCTGATGTCGAGAGTTGTCTTTCGGAGGGCGGCTCGGAA GCGCTGGGTGTTGCGGCGGTCACATCAGCCTTTCATTTTTGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig22:1209948..1210889+

>mRNA_P-fluviatile_contig22.4852.1 ID=mRNA_P-fluviatile_contig22.4852.1|Name=mRNA_P-fluviatile_contig22.4852.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1884bp|location=Sequence derived from alignment at P-fluviatile_contig22:1209948..1210889+ (Porterinema fluviatile SAG_2381)
TGGATAGAGAAGTACCGCCCGCGGGCGTTGGAAGATGTTCGGGGGAACGC
TGACGTGGTACGAGCGCTGCTGTCTTACAAGACACCGGCCGAGCTTCCCC
ACTTGCTGCTTCACGGGCCTCCGGGGGCGGGAAAGACGTCAGCCATTCTC
GCTATCGCGCGAAGCTTTTACGGCGACACCGGTTGCTCCTCCATGGTCCT
CGAACTGAACGCCAGCGACTACCGGGGAGTAGGCACCGTGAGAAACGAAA
TCGAGTGTTTCACGCGGTGCTCGTTCGTGGCGGAGGCGGGGGGGAAGACG
TTGGCCAAGATGGTTATTCTGGATGAGGCGGACAGCCTGACGCACTTATC
GCAGTGCGCTCTGCGGAGCCTGATCGATCGGTCGGGGGATAGGGTTCGTT
TTTGTCTGTGTTGCAACTTCATCAGCAAGCTGTCCAAGGGCTTGGTTTCG
CGGTGCACTTCTTTCCGCTTTTCGACCATTGCGAAGTCGGAGTTGTTGTG
CACCACGCGGACGGTTGCGAAAAAAGAGGGCTTGTCTATCTCGGAAGATT
GTTTGGACACGGTGGTGAAGCTTTCCCACGGCGACGCTCGTCGGGCGATC
AATCTGCTGCAGAGCGTGAGCTTGAGTGTGTATAATGATCTCTTGCACCA
ATCCATCTACGGTTACTGCGGTGTCCCCGAGCCGGCTGAGATCGGTGCAC
TGCTCGAGTCTCTGCTCAACAAGTCGTTTACTGAGGCGTATCACGAGCTA
CACGATCTCGTTTTTGGGAACCACTGTTCATTGGCCCACATCATTACCCT
TTTGGCCGAGCAACTCGTCGCGCGTGAACACAGCCGACTTGGGGTGGTGT
TGTCACACCTCGCTGATGTCGAGAGTTGTCTTTCGGAGGGCGGCTCGGAA
GCGCTGGGTGTTGCGGCGGTCACATCAGCCTTTCATTTTTGATGGATAGA
GAAGTACCGCCCGCGGGCGTTGGAAGATGTTCGGGGGAACGCTGACGTGG
TACGAGCGCTGCTGTCTTACAAGACACCGGCCGAGCTTCCCCACTTGCTG
CTTCACGGGCCTCCGGGGGCGGGAAAGACGTCAGCCATTCTCGCTATCGC
GCGAAGCTTTTACGGCGACACCGGTTGCTCCTCCATGGTCCTCGAACTGA
ACGCCAGCGACTACCGGGGAGTAGGCACCGTGAGAAACGAAATCGAGTGT
TTCACGCGGTGCTCGTTCGTGGCGGAGGCGGGGGGGAAGACGTTGGCCAA
GATGGTTATTCTGGATGAGGCGGACAGCCTGACGCACTTATCGCAGTGCG
CTCTGCGGAGCCTGATCGATCGGTCGGGGGATAGGGTTCGTTTTTGTCTG
TGTTGCAACTTCATCAGCAAGCTGTCCAAGGGCTTGGTTTCGCGGTGCAC
TTCTTTCCGCTTTTCGACCATTGCGAAGTCGGAGTTGTTGTGCACCACGC
GGACGGTTGCGAAAAAAGAGGGCTTGTCTATCTCGGAAGATTGTTTGGAC
ACGGTGGTGAAGCTTTCCCACGGCGACGCTCGTCGGGCGATCAATCTGCT
GCAGAGCGTGAGCTTGAGTGTGTATAATGATCTCTTGCACCAATCCATCT
ACGGTTACTGCGGTGTCCCCGAGCCGGCTGAGATCGGTGCACTGCTCGAG
TCTCTGCTCAACAAGTCGTTTACTGAGGCGTATCACGAGCTACACGATCT
CGTTTTTGGGAACCACTGTTCATTGGCCCACATCATTACCCTTTTGGCCG
AGCAACTCGTCGCGCGTGAACACAGCCGACTTGGGGTGGTGTTGTCACAC
CTCGCTGATGTCGAGAGTTGTCTTTCGGAGGGCGGCTCGGAAGCGCTGGG
TGTTGCGGCGGTCACATCAGCCTTTCATTTTTGA
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