mRNA_P-fluviatile_contig22.4796.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig22.4796.1
Unique NamemRNA_P-fluviatile_contig22.4796.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig22.4796.1 vs. uniprot
Match: D7G727_ECTSI (Coatomer subunit delta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G727_ECTSI)

HSP 1 Score: 859 bits (2220), Expect = 2.250e-302
Identity = 486/565 (86.02%), Postives = 507/565 (89.73%), Query Frame = 2 
Query:  254 AENMVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPLDSLFLLLVTNKGSNIVEDLETLRMLSKVVPDVAGGMTEDKVQAKAFELVFAFDEVITTGGHKENITLQQASEHATNRKQKIEHKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKAKEASLRGTXXXXXXXXXXX--------SSMYTEASDYGVTSMGGGQGFXXXXXXXXXXXXAASFSTPSAGFASSSPLVDTRVSTQQGMKLGGASKSKNILDSLIKEDHLVSIPSATKAKAGGADAAVPAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGVFTFQTHPKVNKAMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHLVQEGTLLWTMDLLDQSNRTGSLEFNISSRDPEAFFPITVTFGSSQLFCDVQVAGVVSTETEAPIQYGLTASLTADTYTVS 1924
            A   VVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIET+TVRYVYQP+++LFLLLVTNK SNIVEDLETLRMLSKVVPDVAGG+TEDKV +K+FELVFAFDEVITTGGHKENITLQQ              KTNMEMDSHEERLH MIQDSKREAAKEEA RRAKELREKAKEA LRG+   XXXXXXXX        SSMYTEASDYGV S GG     XXXXXXXXXX +   S P+AG ASS+P+ DTRVSTQ GMKLGGASKSKN+LDSLIKEDHLVSIPSA+KA AGG +AAVPAAVVAASVHPV+LSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSG FTFQTHPKVNK MYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPE EGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHL QEGTLLWTMDLLDQSNRTGSLEFNI+SRD EAFFPITVTF S+QLFCDVQVAGV +TETE+PIQYG TASLTAD+YTVS
Sbjct:   12 ARKQVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGVTEDKVMSKSFELVFAFDEVITTGGHKENITLQQI-------------KTNMEMDSHEERLHTMIQDSKREAAKEEADRRAKELREKAKEAQLRGSGMGXXXXXXXXXXXXXXSGSSMYTEASDYGVASTGG----TXXXXXXXXXXASLGLSVPAAGPASSTPVADTRVSTQ-GMKLGGASKSKNMLDSLIKEDHLVSIPSASKASAGGTEAAVPAAVVAASVHPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGTFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEPEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHLTQEGTLLWTMDLLDQSNRTGSLEFNIASRDAEAFFPITVTFASNQLFCDVQVAGVTNTETESPIQYGYTASLTADSYTVS 558
[Close]
BLAST of mRNA_P-fluviatile_contig22.4796.1 vs. uniprot
Match: A0A835ZBZ4_9STRA (Coatomer subunit delta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBZ4_9STRA)

HSP 1 Score: 538 bits (1387), Expect = 2.610e-177
Identity = 316/570 (55.44%), Postives = 393/570 (68.95%), Query Frame = 2 
Query:  239 CWASKAENMVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPLDSLFLLLVTNKGSNIVEDLETLRMLSKVVPDVAGGMTEDKVQAKAFELVFAFDEVITTGGHKENITLQQASEHATNRKQKIEHKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKAKEASLRGTXXXXXXXXXXXSSMYTEASDYGVTSMGGGQGFXXXXXXXXXXXXAASFSTPSAGFASSSPLVDTRVSTQQGMKLG---GASKSKN-ILDSLIKEDHLVSIPSATKAKAGGADAAVP---AAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGV-FTFQTHPKVNKAMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELVR-PMELHDVRISIPLGSSAVPE--IAAIDGSHRHLVQEGTLLWTMDLLDQSNRTGSLEFNISSRDPEAFFPITVTFGSSQLFCDVQVAGVVSTETEAPIQYGLTASLTADTY 1915
            C +      VVLSA+ITT+NGKALLARQ+VDMSRIRIEGLLAAFPKLMGTGNKQHTFIETD+VRY+YQP+++LFLLL+TNKGSNIVEDLETLRMLSKVVPDVAGG+ EDKV A+ FELVFAFDEV+T GG +E I L Q              K N+EMDSHEERLHNMIQ+SKREAA++EA R+A+E+R++ K     G      XXXXXX               G G                   + P+           +R +  +GMKLG   G +K +N +LDSL+ E+ L  +P+A    AGGA A +P   AA  AA+V+PV+L +EE+LS  LTREGTLE +EVKGTLSLTAN +GA++CK+VLA+  P      FQTHPKVN+A+YD+++ LA KD  KGFPV RPVGVLRWSL T+DE+  PLT+NCWPE EG G + VS+EY L R   ELHDV IS+PLG +A P    +A  G++RH    G L+W ++L+D SN +GSLEF + SRD E FFPI + F SS L+  +QV GVVS + EAPI +G+ +SLT ++Y
Sbjct:    2 CVSGSPSLQVVLSAAITTKNGKALLARQYVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDSVRYIYQPMETLFLLLITNKGSNIVEDLETLRMLSKVVPDVAGGVAEDKVAARCFELVFAFDEVLTAGGMRETIALPQV-------------KVNLEMDSHEERLHNMIQESKREAARDEAARKAQEMRQRQKALQAAGGSAMAGXXXXXXXXXXXXXXXXAADPYGYG----------------TRTAAPAXXXXXXXXXXPSRAT--KGMKLGLGGGTAKGRNAMLDSLMAEEKLAPVPAAA---AGGAPAVLPEVTAAATAAAVYPVSLVMEEKLSAHLTREGTLEQLEVKGTLSLTANDEGASRCKIVLAAGGPVPAGLAFQTHPKVNRALYDASRALALKDAGKGFPVGRPVGVLRWSLATSDEAAAPLTVNCWPEDEGNGSVAVSLEYALGRGARELHDVVISVPLGGAAAPPRVTSADGGAYRHDAAAGALVWRLELIDNSNASGSLEFTVQSRDTEGFFPIQMQFTSSLLYAQLQVGGVVSIDAEAPIPFGMVSSLTTESY 537
[Close]
BLAST of mRNA_P-fluviatile_contig22.4796.1 vs. uniprot
Match: A0A4D9DAV0_9STRA (Coatomer subunit delta n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAV0_9STRA)

HSP 1 Score: 493 bits (1269), Expect = 1.190e-159
Identity = 287/565 (50.80%), Postives = 387/565 (68.50%), Query Frame = 2 
Query:  263 MVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGN-KQHTFIETDTVRYVYQPLDSLFLLLVTNKGSNIVEDLETLRMLSKVVPDVAGGMTEDKVQAKAFELVFAFDEVITTGGHKENITLQQASEHATNRKQKIEHKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKAKEASLRGTXXXXXXXXXXXSSMYTEASDYGVTSMGGGQGFXXXXXXXXXXXXAASFST--PSAGFASSSPLVDTRVSTQQGMKLGGASKSKNILDSLIKEDHLVSIPSATKAKAGGADAAVPAAVVAASV---HPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTD----PSGVFTFQTHPKVNKAMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELV-RPMELHDVRISIPLGSSAVPEIAAIDGSHRHLVQEGTLLWTMDLLDQSNRTGSLEFNISSRDPEAFFPITVTFGSSQLFCDVQVAGVVSTET-EAPIQYGLTASLTADTYTV 1921
            MVVLS +I T+NGKALL+RQFV+MSRIRIEGLLAAFPKL+G+G  KQHTFIETDTVRYVYQP+D+LFLLL+TNK SNIVEDLETLR+LSK+VPDVAGG+TE++V  K FELVFAFDEV+TTGG++E++TLQQ              KTNMEMDSHEE+L  MI+ SK ++AK++A R+AK ++E+ +E +                  Y      G+  +GG   F            A++ S   PS   + +    +T  +  +GMKLG  SK+ ++LDSL++ED+L +I +AT+A    A A +    V+A V    P+ L+VEE++   LTR+G +++ EVKG+L+LTA ++ A   KV LA+      P+G+  FQTHPKVNK  YDS + L  KD +KGFPV R VGVLRWS ++TD+S +P+T+NCWPE EG G+MN+S+EY++  +  ELH+V +SIPLG++  PE+A+IDG++RH  +E  L+W MDL+D SN +G+LEF ++ RD + FFPI V+F S  L+ DV V  V   E   API Y LT  L+ D+Y V
Sbjct:    1 MVVLSGAICTKNGKALLSRQFVEMSRIRIEGLLAAFPKLLGSGEEKQHTFIETDTVRYVYQPIDNLFLLLITNKASNIVEDLETLRLLSKIVPDVAGGVTEERVSDKCFELVFAFDEVLTTGGYRESVTLQQI-------------KTNMEMDSHEEKLALMIKQSKMDSAKDQAARQAKAIKERLRELAR----DRLGATRSGLGGAYQGIGGGGMDYVGGSGAFDGQAGIGQDAFGASTPSVYAPSTVDSFTVSKTETVKTVSKGMKLGAPSKAASMLDSLVQEDNLSNI-AATRAPPLSAGAGLGEEAVSAPVIQHQPIQLAVEEKIVAHLTRDGAIDTFEVKGSLTLTATTEAAALSKVALAAGGARPVPAGL-NFQTHPKVNKQEYDSNRVLVLKDTSKGFPVGRAVGVLRWSYSSTDDSVVPITLNCWPEEEGQGKMNISIEYQMNGQSQELHNVNVSIPLGTAEPPEVASIDGTYRHDPREQRLIWHMDLVDASNSSGALEFVVAGRDAQVFFPIIVSFSSQILYADVNVTAVTGLEDGSAPIPYSLTKLLSPDSYIV 546
[Close]
BLAST of mRNA_P-fluviatile_contig22.4796.1 vs. uniprot
Match: A0A7S2MQW5_9STRA (Coatomer subunit delta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQW5_9STRA)

HSP 1 Score: 486 bits (1250), Expect = 4.300e-157
Identity = 275/565 (48.67%), Postives = 378/565 (66.90%), Query Frame = 2 
Query:  263 MVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPLDSLFLLLVTNKGSNIVEDLETLRMLSKVVPDVAGGMTEDKVQAKAFELVFAFDEVITTGGHKENITLQQASEHATNRKQKIEHKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKAKEASLRGTXXXXXXXXXXXSSMYTEASDYGVTSMGGGQGFXXXXXXXXXXXXAASFSTPSAGFASS---------SPLVDTR-VSTQQGMKLGGASKSKNILDSLIKEDHLVSIPSATKAKAGGADAAVPAAVVA-ASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGVFTFQTHPKVNKAMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAID-GSHRHLVQEGTLLWTMDLLDQSNRTGSLEFNISSRDPEAFFPITVTFGSSQLFCDVQVAGVVSTETEAPIQYGLTASLTADTYTV 1921
            MVVLSA++ T+NG+ALLARQ+VDM+RIRIEGLLAAFPKLMGTG++QHTF+ETD+VRYVYQP+++L+LL++TNK SNIVEDLETLR+LSK+VP++A G+TE+K+  K FELVFAFDEV+T GGH+E+IT+ Q                N+ M+SHEE+LH MI++SK  + KEEA RRAK ++E+ + +   G                   S  G+  MGGG G                FS  S+G  +S         SP  D   V+ ++GMKLGG+SK + I+D  + ED+L   P + K       A  PA   A  + HPV+L +EE+++  + REG LE ME+KGT++L AN D  +KCKV+LA    + +FT+QTHPKV+K  Y+    L  KD+ KGFP  + +G+LRWS+NT D+SQ+P++INCWPE E G  MNV++E+     MELH+V+ISIPLG+S  PEI ++D GSH+H      L+W ++L+D  N+T SLEFN++  D +AFFPI+V+FGS+ L   + VA ++S+E +APIQ+GL   L  D+Y V
Sbjct:    1 MVVLSAAVCTKNGRALLARQYVDMTRIRIEGLLAAFPKLMGTGSQQHTFLETDSVRYVYQPIETLYLLVITNKASNIVEDLETLRLLSKLVPEIAEGVTEEKILDKMFELVFAFDEVLTPGGHRESITMPQIQ-------------VNLSMESHEEKLHKMIEESKVSSTKEEADRRAKTIKEQQRSSKAGGM------------------SSGGMAGMGGG-GDSMAESVPETDYTTRPFSELSSGQQTSTSSEWGYSQSPKADPEPVTAKKGMKLGGSSKKQQIMDKFVSEDNLA--PLSAKGNDTSGKAMTPATAAAPVATHPVSLLLEEKVAVTMNREGALELMEIKGTMALVANGDEFSKCKVILAGAK-NPLFTYQTHPKVDKKAYEKENILCLKDKNKGFPKGK-LGILRWSMNTQDDSQVPISINCWPEDEDGN-MNVNVEFNAEGDMELHNVQISIPLGTSNPPEIVSMDTGSHKHNRTNEVLIWDIELIDGQNKTSSLEFNVAQDDADAFFPISVSFGSTHLKAGLDVANILSSENDAPIQFGLAKMLVTDSYQV 528
[Close]
BLAST of mRNA_P-fluviatile_contig22.4796.1 vs. uniprot
Match: F0YG49_AURAN (Coatomer subunit delta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG49_AURAN)

HSP 1 Score: 484 bits (1245), Expect = 1.480e-156
Identity = 267/554 (48.19%), Postives = 365/554 (65.88%), Query Frame = 2 
Query:  263 MVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPLDSLFLLLVTNKGSNIVEDLETLRMLSKVVPDVAGGMTEDKVQAKAFELVFAFDEVITTGGHKENITLQQASEHATNRKQKIEHKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKAKEASLRGTXXXXXXXXXXXSSMYTEASDYGVTSMGGGQGFXXXXXXXXXXXXAASFSTPSAGFASSSPLVDTRVSTQQGMKLGGASKSKNILDSLIKEDHLVSIPSATKAKAGGADAAVPAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGVFTFQTHPKVNKAMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHLVQEGTLLWTMDLLDQSNRTGSLEFNISSRDPEAFFPITVTFGSSQLFCDVQVAGVVSTETEAPIQYGLTASLTADTYTVS 1924
            MVVLSAS+ T+NG+ L ARQFV+M+R+R+EGLLAAFPKLMGTGNKQHTFIETD+VRYV+QP++S++LLL+TNK SNIVEDLETLR+LSKVVP++AGG +E+K+  KAF+LVFAFDEVITTGG++E I L+Q              +TN+EMDSHEE+LHNM++ +K ++AK++A   +K ++ + +EAS  G                      G    GGG G              + +  P+       P+V  +      MKLGG     +++D +  ED +   P+ T +K              A+  P++L VEE+L+  L++EG LES ++KGTLSLTAN +GA  CKV +A    +   TFQ HPKV+K  +++   +  KD +KGFPV RPVGV+RWSL+TTDE+ +PLTINCWPE EG G MNV++EYEL RPMEL+DV I IP G    PEI ++DGSH H  +E  L W +D++D SN+ G+LEFNI++RD + FFPI VTF S  L+ D  +A V + + +AP+ Y L  +LT D++ ++
Sbjct:    1 MVVLSASVCTKNGRCLFARQFVEMNRLRVEGLLAAFPKLMGTGNKQHTFIETDSVRYVWQPVESIYLLLITNKASNIVEDLETLRLLSKVVPEIAGGHSEEKLSDKAFDLVFAFDEVITTGGYREAIDLRQI-------------RTNLEMDSHEEKLHNMVKKTKMDSAKDQAAHMSKVIKSRQREASKSGDDPYGG----------------GGGDFGGGMGMPAPPMGGESPYGESPYGAPAPP---PEPVVQVK-----SMKLGGKKNKSSLMDKMAAEDGISIAPAFTPSKPASXXXXXXXXXXXAA-QPISLIVEEKLTVALSQEGALESFDLKGTLSLTANDEGAALCKVQIADKAAAPGTTFQVHPKVSKKDWEADGAVMMKDASKGFPVGRPVGVVRWSLSTTDEALVPLTINCWPEDEGDGVMNVNVEYELKRPMELYDVVIRIP-GCGNAPEIVSVDGSHTHDAKEEVLDWKLDMVDGSNKQGTLEFNINARDADDFFPIAVTFRSKSLYYDAPIASVTAIDGDAPVAYSLNKALTVDSFRIA 515
[Close]
BLAST of mRNA_P-fluviatile_contig22.4796.1 vs. uniprot
Match: A0A7S3H6H8_9STRA (Coatomer subunit delta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6H8_9STRA)

HSP 1 Score: 466 bits (1198), Expect = 3.020e-149
Identity = 277/569 (48.68%), Postives = 372/569 (65.38%), Query Frame = 2 
Query:  260 NMVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQ-HTFIETDTVRYVYQPLDSLFLLLVTNKGSNIVEDLETLRMLSKVVPDVAGGMT---EDKVQAKAFELVFAFDEVITTGGHKENITLQQASEHATNRKQKIEHKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKAKEASLRGTXXXXXXXXXXXSSMYTEASDYGVTSMGGGQGFXXXXXXXXXXXXAASFSTPSAGFASSSPLVDTRVSTQ-------QGMKLGGA-SKSKNILDSLIKEDHLVSIPSATKAKAGGADAAVPAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDP-SGVFTFQTHPKVNKAMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYEL-VRPMELHDVRISIPLGSSAVPEIAAIDGSHRHLVQEGTLLWTMDLLDQSNRTGSLEFNISSRDPEAFFPITVTFGSSQLFCDVQVAGVVSTETEAPIQYGLTASLTADTYTVS 1924
            NMVVLSA++ T+ GKAL+ARQFVD+SRIRIEG+LAAFPKLMGT  KQ HTF+ET+ VRYVYQ LD+L+LLL+TN+ SNIVEDLETLR+LSKV+P+VAG MT   E+ V  K+FEL+FA DEVITTGG++E I LQQ              +TNMEM+SHEE+LHNMI+ SK E+AK++A   A+ +++K KE    G            S     AS +  ++  G                 +SF+ P    A+SSP+   + S+        +GM L  A +K+K++ D+L++ED L  + SA+K     A   + AAV   +  PVTLS+ E++S  L+REG +E  E+KG+L+LTA  D A  C V L        VF+F THPKVNKA Y+    L  K+  KGFP ARPVG+L+W+ + T E  +PL INCWPE E  GQMNVS+EY + V+ +ELHDVRI IPLG++A P I ++DGSH+H    G L+WT+DL+D SN TGSLEFN+  R  +AFFPI V F S +L+  V+V  V +  + AP+ YGLT +++++ Y ++
Sbjct:    6 NMVVLSAAVCTKGGKALVARQFVDVSRIRIEGMLAAFPKLMGTDAKQQHTFVETEAVRYVYQLLDNLYLLLITNRASNIVEDLETLRLLSKVIPNVAGVMTNLTEEHVADKSFELMFALDEVITTGGYREPINLQQI-------------RTNMEMESHEEKLHNMIKISKMESAKDQASVAARAIKDKQKEQMRMGASGGGMVGIGSNSRSEFGASGFDSSAHSG-----------------SSFADPVP--AASSPVSTAQASSSSRARQPVKGMSLNPAGAKNKSVEDALMREDKLAPLISASKNSVSDAPTPLTAAV---AQQPVTLSIVEKVSATLSREGLVEMFEIKGSLTLTAADDEAALCSVQLKPASARDSVFSFNTHPKVNKAAYEKTGLLQLKEANKGFPSARPVGILKWTHSGTSEELVPLKINCWPEEESRGQMNVSIEYSMDVKGLELHDVRIVIPLGTNAAPTIVSVDGSHKHNASSGELVWTIDLIDASNTTGSLEFNVQQRSADAFFPIGVHFASPKLYSGVEVVSVNAGGSGAPVVYGLTKNMSSEEYVIN 539
[Close]
BLAST of mRNA_P-fluviatile_contig22.4796.1 vs. uniprot
Match: A0A7S3ZRB7_9STRA (Coatomer subunit delta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRB7_9STRA)

HSP 1 Score: 447 bits (1150), Expect = 2.360e-142
Identity = 271/556 (48.74%), Postives = 367/556 (66.01%), Query Frame = 2 
Query:  263 MVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPLDSLFLLLVTNKGSNIVEDLETLRMLSKVVPDVAGGMTEDKVQAKAFELVFAFDEVITTGGHKENITLQQASEHATNRKQKIEHKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKAKEASLRGTXXXXXXXXXXXSSMYTEASDYGVTSMGGGQGFXXXXXXXXXXXXAASFSTPSAGFASSSPLVDTRVSTQQGMKLGGASKSK-NILDSLIKEDHLVSIPSATKAKAGGADAAVPAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGVFTFQTHPKVNKAMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRP-MELHDVRISIPLGSSAVPEIAAIDGSHRHLVQEGTLLWTMDLLDQSNRTGSLEFNISSRDPEAFFPITVTFGSSQLFCDVQVAGVVSTETEAPIQYGLTASLTADTYTVS 1924
            MV+LSA++TT+NG+ALL+RQFVDM+R+R+EGLLAAFPKL GTGNKQHTF+ETD+VRYVYQP++S+FLLL+TNK SNIVEDLETLR+LSKVVP++AGG +EDKV   AFELVFAFDEVITTGG++E I ++   +             N++MDSHEE+L NM++ SK +AAK++A   ++ ++++ ++A   G              M  E  +Y            XXXXXXXXXX   +++ P A      P++       QGMKLG   K K +++  +  ED L    S  + +   ADA       A S  P+ LSVEE+L+  L++EG LE+ ++KGTLSLTAN D A  C++ +A    +   TF THPKV+K  ++S   +  K  AKGFPV R VGV+RW+L+TTDE Q+PLTINCWPE EG GQMNV++EY   R  MEL+DV I IP G ++ PEI ++DG+H+H  +   L W +D +D  N TG+LEFNI+ +D  AFFPI V+F S  L+ DV ++ V STE    I Y L   +T D++ ++
Sbjct:    1 MVILSAAVTTKNGRALLSRQFVDMNRLRVEGLLAAFPKLQGTGNKQHTFVETDSVRYVYQPVESIFLLLITNKASNIVEDLETLRLLSKVVPEIAGGTSEDKVSDHAFELVFAFDEVITTGGYRETIDMRTIRQ-------------NLDMDSHEEKLANMVKKSKLDAAKDQAKHMSQVIKQRQRDAMKTGMGGGGPMAGMGGGDM-DEDDEYNXXXX-------XXXXXXXXXXFMDAYANP-APPPEPEPIIQV-----QGMKLGKKKKGKVDLMSKMAAEDGLDVRASMPQEEI--ADAPXXXXXXATS-QPIALSVEEKLTISLSQEGALEAFDLKGTLSLTANDDVAAACRLTVAHKTAAAGTTFATHPKVDKKAWESDGIVQMKGNAKGFPVGRAVGVVRWALSTTDEQQVPLTINCWPEDEGDGQMNVNIEYTAARSGMELYDVSIKIP-GCASNPEIVSVDGTHQHDARSEILDWQLDCIDSGNPTGTLEFNIAQKDEGAFFPIEVSFRSKSLYYDVPISSVESTEGHGSIGYSLDKKVTVDSFRIA 525
[Close]
BLAST of mRNA_P-fluviatile_contig22.4796.1 vs. uniprot
Match: A0A7S2RJQ4_9STRA (Coatomer subunit delta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJQ4_9STRA)

HSP 1 Score: 448 bits (1153), Expect = 2.480e-142
Identity = 265/565 (46.90%), Postives = 364/565 (64.42%), Query Frame = 2 
Query:  263 MVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTG--NKQHTFIETDTVRYVYQPLDSLFLLLVTNKGSNIVEDLETLRMLSKVVPDVAGGMTEDKVQAKAFELVFAFDEVITTGGHKENITLQQASEHATNRKQKIEHKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKAKEASLRG-TXXXXXXXXXXXSSMYTEA--SDYGVTSMGGGQGFXXXXXXXXXXXXAASFSTPSAGFASSSPLVDTRVSTQQGMKLGGASKSKNILDSLIKEDHLVSIPSATKAKAGGAD-----AAVPAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGVFTFQTHPKVNKAMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRP-MELHDVRISIPLGSSAVPEIAAID-GSHRHLVQEGTLLWTMDLLDQSNRTGSLEFNISSRDPEAFFPITVTFGSSQLFCDVQVAGVVSTETEAPIQYGLTASLTADTYTV 1921
            MVVLSAS+ T+NGKAL+ARQFV MSRIRIEGLLAAFPKL+G+   N QHTFIETD+VRYVYQP+++LFLL++TNK SNIVEDLETLR+LSK+VP+  GG+TEDK+  K F+L+FAFDEVITTGGH+E+ITLQQ                N+ M+SHEE+LH MI+ SK  +AKEEA R+AK L+E+ ++  L G T              + E   S  G +S   G               +AS+     G +S +   D  V  ++GM+LGG SK + ++D L+ ED+L  +PSA               A PA  V    HP+ + +EE+++  L REG +ES+E KGT+ LT+N+  A +C+V++     + +F +QT+PKV+K  Y+    +A KD +KGFP  + VGVLRWS  T D+  +P++INCWPE E G  MNV++EY + RP +ELH+V I IPLG+SA P + ++D G+HRH      L+W ++L+D+SN++ SLEF++  R  +AFFPI V F S+QL   V VA +   E + PI + L  S  A++Y V
Sbjct:   19 MVVLSASVCTKNGKALVARQFVGMSRIRIEGLLAAFPKLVGSEAKNTQHTFIETDSVRYVYQPIENLFLLIITNKASNIVEDLETLRLLSKLVPETCGGLTEDKITDKMFDLIFAFDEVITTGGHRESITLQQIQ-------------VNVSMESHEEKLHKMIEQSKVSSAKEEADRKAKALQEQRRQDKLSGATSMSGIEGGSTGEDTFAERHMSSGGFSSAPPGSAMYADHAPLPS---SASY----GGVSSPTSRRDEPVLPKKGMQLGGGSKKQQLMDKLVTEDNLTPLPSAASTAXXXXXXXXXXVATPAVEV---THPINILLEEKITGALNREGAVESLETKGTMFLTSNTAEACRCQVIMTPAK-NPLFAYQTNPKVDKKAYEQEHRIALKDASKGFPQGKGVGVLRWSAATQDDEHVPISINCWPE-EDGADMNVNVEYSVDRPGLELHNVSIVIPLGTSASPNVLSVDSGTHRHNRSSEELVWEIELIDESNKSASLEFSVPQRSSDAFFPIQVRFASNQLSAGVDVANITDLEGK-PIHFSLQKSAVAESYKV 557
[Close]
BLAST of mRNA_P-fluviatile_contig22.4796.1 vs. uniprot
Match: A0A1V9ZC55_9STRA (Coatomer subunit delta n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC55_9STRA)

HSP 1 Score: 432 bits (1110), Expect = 1.840e-132
Identity = 250/569 (43.94%), Postives = 359/569 (63.09%), Query Frame = 2 
Query:  263 MVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPLDSLFLLLVTNKGSNIVEDLETLRMLSKVVPDVAGGMTEDKVQAKAFELVFAFDEVITTGGHKENITLQQASEHATNRKQKIEHKTNMEMDSHEERLHNMIQDSKREAA----KEEAGRRAKELREKAKEASLRGTXXXXXXXXXXXSSMYTEASDYGVTSMGGGQGFXXXXXXXXXXXXAASFSTPSAGFASSS-----PLVD------TRVSTQQGMKLGGASKSKNILDSLIKEDHLVSIPSATKAKAG-GADAAVPAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGVFTFQTHPKVNKAMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHLVQEGTLLWTMDLLDQSNRTGSLEFNISSRDPEAFFPITVTFGSSQLFCDVQVAGVVSTETEAPIQYGLTASLTADTYTV 1921
            MVVLSA++  +NGK ++ARQFV++SRIR+EGLL AFPKL+ + ++QHTFI+T++VRYVYQP++S FLLL+TNK SNIVEDL T+++++K+VPD+ G +TE  ++ K F+LVF FDE++T GGH ENITLQQ              +TNMEM+SHEE+LH MIQ +K+E A    K +  R  +E REKA+     G            +S +   S YG        GF            ++ F++PSA  +S+S     P ++      +  S   GMKLGG+    + LD++  ED L  IP    A A   A  A P    A S  PV +++EE+LS  L R+G +E +EVKG+L +  N   ++ C++ L  ++ +G+  FQTHPKV+K +++S   LA KD +K FP +R V VLRW++ T DES +PL I CWPE EG G+M VS+EY + R M L +V I IPLG++ +P+I+ IDG +RH   EG+LLW +D +D SN +GSLEF+I   + +AFFPI V+F S  ++CD+ V  V+ T   +P++YG    ++ D+Y +
Sbjct:  312 MVVLSAALLAKNGKVMVARQFVEVSRIRLEGLLTAFPKLLASESRQHTFIDTESVRYVYQPIESYFLLLITNKTSNIVEDLHTMQLMAKLVPDICGTLTEAHIREKQFDLVFGFDELLTAGGHSENITLQQI-------------RTNMEMESHEEKLHLMIQKTKQENAIADMKRQQQRIKEEQREKARMEKAAGM-----------TSPFNRNSSYG--------GFGSN---------SSGFTSPSASSSSNSFKAAEPYIEAPKQSSSSSSRTSGMKLGGSKPGNSFLDAMAAEDDLKDIPPMAMAAANIPAPTAKPEPAAAVSHEPVGIAIEEKLSVVLNRDGAVEQLEVKGSLFVAGNDPESSVCRLRLRHSNANGI-NFQTHPKVDKKLFESQSILALKDDSKPFPPSR-VAVLRWAIKTQDESFLPLNITCWPEEEGNGKMTVSLEYSMDREMNLENVNIIIPLGANDLPQISHIDGDYRHNPSEGSLLWHLDTIDSSNSSGSLEFSIRGNNLDAFFPIGVSFFSRSIYCDLAVDSVIRTSDGSPVKYGFDQLVSTDSYVI 837
[Close]
BLAST of mRNA_P-fluviatile_contig22.4796.1 vs. uniprot
Match: A0A067CNQ5_SAPPC (Coatomer subunit delta n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CNQ5_SAPPC)

HSP 1 Score: 415 bits (1067), Expect = 4.380e-130
Identity = 244/555 (43.96%), Postives = 356/555 (64.14%), Query Frame = 2 
Query:  263 MVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPLDSLFLLLVTNKGSNIVEDLETLRMLSKVVPDVAGGMTEDKVQAKAFELVFAFDEVITTGGHKENITLQQASEHATNRKQKIEHKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKAKE-ASLRGTXXXXXXXXXXXSSMYTEASDYGVTSMGGGQGFXXXXXXXXXXXXAASFSTPSAGFASSSPLVDTRVSTQQGMKLGGASKSKNILDSLIKEDHLVSIPSATKAKAG-GADAAVPAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGVFTFQTHPKVNKAMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHLVQEGTLLWTMDLLDQSNRTGSLEFNISSRDPEAFFPITVTFGSSQLFCDVQVAGVVSTETEAPIQYGLTASLTADTYTV 1921
            MVVLSA++  +NGK ++ARQFV++SRIR+EGLL AFPKL+ + ++QHTFI+T++VRYVYQP+++ FLLL+TNK SNIVEDL T+++++K+VPD+ G +TE  ++ K F+LVF FDE++  GGH ENI L Q              +TNMEM+SHEE+LH MIQ +K+E A  +  R+ + ++E+ +E A +              SS Y            GG G XXXXXXXXXXXX+++    S    + +P +    S   GMKLGG+    + LD++  ED L  IP    A A   A +A P    A S+ PV +++EE++S  L R+G +E +EVKG+L +  N   +  C++ L  ++ +G+  FQTHPKV+K ++++   LA KD +K FP +R V VLRW++ T DE+ +PL I CWPE EG G+M VS+EY + R M L +V I IPLG++ +P ++ IDG +RH   +G LLW +D +  +N +GSLEF+I   D +AFFPI+V+F S  ++CD+ V  V+     AP++YG    ++ D Y V
Sbjct:    1 MVVLSAALLAKNGKVMVARQFVEVSRIRLEGLLTAFPKLLASESRQHTFIDTESVRYVYQPIENFFLLLITNKTSNIVEDLHTMQLMAKLVPDICGPLTEAHIREKQFDLVFGFDELLNAGGHSENINLAQI-------------RTNMEMESHEEKLHLMIQKTKQENAIADMKRQQQRIKEEQREKARMEKAAGMSSPFNRNASSAY------------GGFGSXXXXXXXXXXXXSSNTFKSSEPTYTEAPKLSVATSKTSGMKLGGSKPGNSFLDAMAAEDDLKEIPPMAMAAASMPAPSAKPEPAAAVSMEPVGIAIEEKISVSLNRDGAVEQLEVKGSLYVAGNDPESAVCRLHLRHSNANGI-NFQTHPKVDKKLFEAQSILALKDDSKPFPPSR-VAVLRWAIKTQDETFLPLNITCWPEEEGNGKMTVSLEYSMDRNMTLENVNIVIPLGATDLPAVSHIDGDYRHNAADGALLWHLDSISGANSSGSLEFSIRGADLDAFFPISVSFFSRSIYCDLSVDSVLRIADSAPVKYGFDQLVSTDAYVV 528
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G727_ECTSI2.250e-30286.02Coatomer subunit delta n=2 Tax=Ectocarpus TaxID=28... [more]
A0A835ZBZ4_9STRA2.610e-17755.44Coatomer subunit delta n=1 Tax=Tribonema minus Tax... [more]
A0A4D9DAV0_9STRA1.190e-15950.80Coatomer subunit delta n=1 Tax=Nannochloropsis sal... [more]
A0A7S2MQW5_9STRA4.300e-15748.67Coatomer subunit delta n=1 Tax=Dictyocha speculum ... [more]
F0YG49_AURAN1.480e-15648.19Coatomer subunit delta n=1 Tax=Aureococcus anophag... [more]
A0A7S3H6H8_9STRA3.020e-14948.68Coatomer subunit delta n=1 Tax=Spumella elongata T... [more]
A0A7S3ZRB7_9STRA2.360e-14248.74Coatomer subunit delta n=1 Tax=Pelagomonas calceol... [more]
A0A7S2RJQ4_9STRA2.480e-14246.90Coatomer subunit delta n=1 Tax=Rhizochromulina mar... [more]
A0A1V9ZC55_9STRA1.840e-13243.94Coatomer subunit delta n=1 Tax=Thraustotheca clava... [more]
A0A067CNQ5_SAPPC4.380e-13043.96Coatomer subunit delta n=2 Tax=Saprolegnia TaxID=4... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig22contigP-fluviatile_contig22:784617..797120 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score862.8
Seed ortholog evalue8.5e-248
Seed eggNOG ortholog2880.D7G727
KEGG koko:K20471
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005798,GO:0005829,GO:0005911,GO:0009506,GO:0016020,GO:0030054,GO:0031410,GO:0031982,GO:0043226,GO:0043227,GO:0043229,GO:0044424,GO:0044444,GO:0044464,GO:0055044,GO:0097708
EggNOG free text desc.retrograde vesicle-mediated transport, Golgi to ER
EggNOG OGsKOG2635@1,KOG2635@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionCoatomer protein complex,delta sub-unit
Ec32 orthologEc-01_011270.1
Exons12
Model size3272
Cds size1665
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig22.4796.1prot_P-fluviatile_contig22.4796.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig22 784879..795775 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815971.0115788-UTR-P-fluviatile_contig22:784616..7848781622815971.0115788-UTR-P-fluviatile_contig22:784616..784878Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 784617..784878 +
1693563907.727421-UTR-P-fluviatile_contig22:784616..7848781693563907.727421-UTR-P-fluviatile_contig22:784616..784878Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 784617..784878 +
1622815971.1717181-UTR-P-fluviatile_contig22:795775..7971201622815971.1717181-UTR-P-fluviatile_contig22:795775..797120Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 795776..797120 +
1693563907.860947-UTR-P-fluviatile_contig22:795775..7971201693563907.860947-UTR-P-fluviatile_contig22:795775..797120Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 795776..797120 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815971.024031-CDS-P-fluviatile_contig22:784878..7848811622815971.024031-CDS-P-fluviatile_contig22:784878..784881Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 784879..784881 +
1693563907.7412765-CDS-P-fluviatile_contig22:784878..7848811693563907.7412765-CDS-P-fluviatile_contig22:784878..784881Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 784879..784881 +
1622815971.0353377-CDS-P-fluviatile_contig22:786730..7868541622815971.0353377-CDS-P-fluviatile_contig22:786730..786854Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 786731..786854 +
1693563907.7531433-CDS-P-fluviatile_contig22:786730..7868541693563907.7531433-CDS-P-fluviatile_contig22:786730..786854Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 786731..786854 +
1622815971.0465784-CDS-P-fluviatile_contig22:787552..7876931622815971.0465784-CDS-P-fluviatile_contig22:787552..787693Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 787553..787693 +
1693563907.7618837-CDS-P-fluviatile_contig22:787552..7876931693563907.7618837-CDS-P-fluviatile_contig22:787552..787693Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 787553..787693 +
1622815971.0578156-CDS-P-fluviatile_contig22:788178..7883471622815971.0578156-CDS-P-fluviatile_contig22:788178..788347Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 788179..788347 +
1693563907.7700164-CDS-P-fluviatile_contig22:788178..7883471693563907.7700164-CDS-P-fluviatile_contig22:788178..788347Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 788179..788347 +
1622815971.0713682-CDS-P-fluviatile_contig22:789256..7893831622815971.0713682-CDS-P-fluviatile_contig22:789256..789383Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 789257..789383 +
1693563907.7786546-CDS-P-fluviatile_contig22:789256..7893831693563907.7786546-CDS-P-fluviatile_contig22:789256..789383Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 789257..789383 +
1622815971.085661-CDS-P-fluviatile_contig22:790224..7904461622815971.085661-CDS-P-fluviatile_contig22:790224..790446Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 790225..790446 +
1693563907.7873025-CDS-P-fluviatile_contig22:790224..7904461693563907.7873025-CDS-P-fluviatile_contig22:790224..790446Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 790225..790446 +
1622815971.0977643-CDS-P-fluviatile_contig22:791054..7912491622815971.0977643-CDS-P-fluviatile_contig22:791054..791249Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 791055..791249 +
1693563907.7997384-CDS-P-fluviatile_contig22:791054..7912491693563907.7997384-CDS-P-fluviatile_contig22:791054..791249Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 791055..791249 +
1622815971.1092598-CDS-P-fluviatile_contig22:791840..7919841622815971.1092598-CDS-P-fluviatile_contig22:791840..791984Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 791841..791984 +
1693563907.811114-CDS-P-fluviatile_contig22:791840..7919841693563907.811114-CDS-P-fluviatile_contig22:791840..791984Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 791841..791984 +
1622815971.1209114-CDS-P-fluviatile_contig22:793082..7931601622815971.1209114-CDS-P-fluviatile_contig22:793082..793160Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 793083..793160 +
1693563907.8198385-CDS-P-fluviatile_contig22:793082..7931601693563907.8198385-CDS-P-fluviatile_contig22:793082..793160Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 793083..793160 +
1622815971.1343873-CDS-P-fluviatile_contig22:793493..7936131622815971.1343873-CDS-P-fluviatile_contig22:793493..793613Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 793494..793613 +
1693563907.8281476-CDS-P-fluviatile_contig22:793493..7936131693563907.8281476-CDS-P-fluviatile_contig22:793493..793613Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 793494..793613 +
1622815971.143981-CDS-P-fluviatile_contig22:794538..7947901622815971.143981-CDS-P-fluviatile_contig22:794538..794790Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 794539..794790 +
1693563907.8365927-CDS-P-fluviatile_contig22:794538..7947901693563907.8365927-CDS-P-fluviatile_contig22:794538..794790Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 794539..794790 +
1622815971.1550763-CDS-P-fluviatile_contig22:795685..7957751622815971.1550763-CDS-P-fluviatile_contig22:795685..795775Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 795686..795775 +
1693563907.8484437-CDS-P-fluviatile_contig22:795685..7957751693563907.8484437-CDS-P-fluviatile_contig22:795685..795775Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 795686..795775 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig22.4796.1

>prot_P-fluviatile_contig22.4796.1 ID=prot_P-fluviatile_contig22.4796.1|Name=mRNA_P-fluviatile_contig22.4796.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=555bp
MVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFI
ETDTVRYVYQPLDSLFLLLVTNKGSNIVEDLETLRMLSKVVPDVAGGMTE
DKVQAKAFELVFAFDEVITTGGHKENITLQQASEHATNRKQKIEHKTNME
MDSHEERLHNMIQDSKREAAKEEAGRRAKELREKAKEASLRGTGMGGGGM
GMSGSSMYTEASDYGVTSMGGGQGFGGGGGDGISSASAASFSTPSAGFAS
SSPLVDTRVSTQQGMKLGGASKSKNILDSLIKEDHLVSIPSATKAKAGGA
DAAVPAAVVAASVHPVTLSVEERLSCQLTREGTLESMEVKGTLSLTANSD
GANKCKVVLASTDPSGVFTFQTHPKVNKAMYDSAKTLASKDQAKGFPVAR
PVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRPMELHDV
RISIPLGSSAVPEIAAIDGSHRHLVQEGTLLWTMDLLDQSNRTGSLEFNI
SSRDPEAFFPITVTFGSSQLFCDVQVAGVVSTETEAPIQYGLTASLTADT
YTVS*
back to top

mRNA from alignment at P-fluviatile_contig22:784617..797120+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig22.4796.1 ID=mRNA_P-fluviatile_contig22.4796.1|Name=mRNA_P-fluviatile_contig22.4796.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=12504bp|location=Sequence derived from alignment at P-fluviatile_contig22:784617..797120+ (Porterinema fluviatile SAG_2381)
CCCCGCTTGCTCCGCGAACTCCTGGGTAGCACAGTCACACCGCAATAGCA
CCTCGCGTGCATTGGAGAGCAAGTGCAGTGGGGAGGTGGGGTGGTCAGTG
TCTACCTGTCCAAAGAAGAAGGGCTTCTGTCGGAGCCCTCAGCTCGGCGT
GGGATAGAAGCCGGAGCGTAGCACCACGCGCGGATCGAAGCTGCGGCATA
GCTGAGGGCGAGAGCAAAGGTCGAGCTACCGCGAGTGCTGCTGGGCGTCC
AAAGCAGAAAATATGGTGAGAGCGACGGAAGTGACGAAAGGCTATGAAGA
TTCGGGAATGAATCGCGTTCTGGCACGGGTGTGGAAGCTGGCGACGCCAT
TGCACGTTATCACACTGCCCTTGACAGTGTGTGCACGGTTCCTCCGTGTG
TCGACAGTCCCTTGTGTGTAGCTCGGGCGTCGGAGAGAGAGGCAGATACC
TGTACAGGGGTTGGAAGACAGAGCTATCAGACGCTTATCCCTGTGCTTCG
CGTTTTGCTGGGAAGGAGCTATCCCGGTGTCGTGGGGTGTGTGGTATTGT
CGTACTGATGTGTGTTCCAGGGTACACACGCCCGCCGTACTCCGTCCATT
CTGAAAATGTTCTTGTACGCGTGAACCCAGGGGGGTGCCGGGGTGTCTCA
TCCCCTTTGGTTCGACCGCTGCATGTTGACGCCGCTCCATTATCTGCGCC
ACATGTGCAACCCCTGCTGTGAATCTGGTCAAGCCGACAGAAAACACGTA
GCAGCAGAACTGTCGGGTACTTGCGTCTGCAAGAAGCACACACTTTAGCG
CTCCCTTCCGAGTTACAATATCCAGAGGTTCTCCGTTCATTTTTTTAGTC
GTTTTTAGATAATCCAGTTCGCTTTACTCTCACAGTCCCGTGGTTGCGTG
GGCAAGTTCACCACGCATTCACAACCGCACCAGTAGCTGCCAGTTTCACG
TTTCTGAAGTGAACGACTCCGTCAAATTTGAGACACTGCCGAAATGACGG
ACGGTATTCCGCCCCCTCCCACCTTCGAGGTTGCGCGTCCGATTTGAGGG
TTAATATTTCACAAAAGCCGAGGCGAAGGCGGCTGAAGTCAATACGGAGG
CTTCCGCATTCTCGACAGAAATAAAATAAATATGGCACAAGCGGAGCCAT
CCGCAAAGCTCCCGCGCAAGCGGAAATACACCATCCCCTGCCTGCAAGAT
CGTCGTGCACTCCACGTGTCGTGTGGAATGTCTCGTCGTTCGCCCTTGTA
TCTGGCTCCGCCTCTCCCGCCTCGTTGCCTCCAGCAGGAGCGCCGTGCCC
GCGATCAGACTCTCAGCTTCAGTGCAAACACCAATTGATCTCTTGGGTTG
CGTTGGGCTTGATGGTTCGAAATCCCCTCGCTTGAGTTCCATTTATTGGC
CAACACTTAACAGTGTATTGATATATTTTTTGTTACTTTGGGCGGCGGGT
TGCGTCCTCGCTGTCATCCTCCGCTCGGCTTCGTTGATCTCAGTATACAT
GAATAACAAATAGCACCGTTGGAGACGTGAGCAAGCATATCGGGGCGAGA
CTGGCTGCCTCTCCCTCGTAAATTTTCATCTTACGTGGAGAAAACGCTTC
CTCTAACATTCGTCAGGGAGGTGATTCTCTCTTGCCGTCCATCGCAGCAG
AGAGGCAGACGAGGCTGATCGCCCTCCCACTGGTAAACCATGGACCTGAG
CCGGATGAGCGCATCACCGTTTTATTCTTCTTCCTTCAATTACCTTTTTA
CGTCCACCGCAGGAGCCGCGGACGAGGTCCATTCGCCTCTTTCTCAAAAA
CCGTTACCTTTTACCTGGAAGAAGGCCTTCCCCTTTTGTTTCATTCGGCT
AGTTCTCTCTTGACGTCCATCGCAGCGGATGCGAGCGAGGTCCCACAGCC
CTATTCCCACAAACCATTTCCCAACCATTGATGTGTCCCACGGTCCTCTC
TCCACAAACCCTTTCCCTAACGCATATAAGTGGTTTTACTTTTCTCCTTT
CTTTCTAGGTGGTTCGCTCGGCGTCCATCGCGGACGAAGCCAGTGTATCG
TCCCTTGCGAATCATTCATCGACCTCTGGACAAAGGATCCCTCCTTGCCG
TCTTATTCCTCCAGGTGGTTCTCTCTGCGTCTATCACCACAAGAAATGGG
AAGGCCCTGCTGGCACGGCAGTTCGTGGACATGAGCCGCATCCGCATCGA
GGGGCTCCTGGCCGCCTTCCCCAAGCTAATGGGCACCGGTGAGCGGGGCG
ATGGCGTCCGCAGCAGGCCGGCGTCGCTGCTCACGACAGCGATAAGCAGT
AGCAGCTTCGGGATGTTTGGTTGAAAGAATGTTCTGGAGTCAGCCGTCGA
AGCCCGTGGCTTTTCTGCACGTGAGAGAAAAAAGCTGCTATTATTAATAG
TAGCAGATTCACGGGTAACCTGGTATTTTCTTGGAGATCATAGAAGCACT
GTTTTGGGGTCGAAATGAGTCAATTGGATTGGTTGAGCGCTCGGCTCTCG
CCACAGCAGAGGCAGTAGCAGCAGCAGCAGCAGCAGCGGTAAGCTCTGGA
AATTTTGGAAAGCCCTGTGTTCAATGTATGTCCCTTGCCGTCAGTCCGAA
GTTCACTTATTTTTTAACCTTTTCCGCATGCAAGGGGCCTATACCACTGG
TGACAGCAACCAATTGGTGCGCTTCGGTCGAGAGTGGTGCTGTTTCAGTC
ATGTGCTGATACTCCGTGCCCAATCTAGCTGTAGAGGGGTACAGCCGGCG
ACAGTAATTCACACGATGTGTGCGAAACAGCACTATCTTTGCCATTCCTT
GCGCTTCCGCTTTTATCTTCCTCCTGGTACCGCAGACAAGTCGACATCTC
GACGTTCAATTGTAGGAAGAGGTTAATCGGCCCTTGCCTAGTCGCTTGAC
GAATTTTCGGGCGAACACGGCAACACCCTTCCGCAGGCAACAAGCAGCAC
ACTTTTATCGAGACGGATACCGTTCGGTACGTGTACCAGCCGCTCGACAG
CCTGTTCCTGCTACTCGTGACCAACAAGGGCAGCAACATTGTGGAGGATC
TCGAGACCCTGCGGATGCTCTCCAAAGGTGGGCGACAACACAGTACGCGC
AGTTCTTTTGTGTGCCTACTAGGCTGCATACTCCTTTCAAGCACGCTGCC
GCTTGTTAGGGTGCTCGTCTCTTGCGCCCGCGACCCGTTCGTTCCTGACA
AAATTGGCGAACAGCTGGCATGCGTAGGTTGATTGACGCGACAGCTCGCT
GTCTCGGCGGCAGCTTCGCCGAGCCGGAATGCTCACTCTGCTCACCTTCT
TCAGTCTTTTCCATGTCCAGGTCAAAGAACACACACTCGTAGACCCCAGT
CCGCCCGCCCAGTCCGCCGGATTCGAAAAAGTTGCCCCGAGTTTCACAAA
AAAATGAAGCGCACAAAACCCGCTTGACTTGATCAATTGGTTACTGACCC
TCGTTTTCCTTCGATTGTTTCGTGGGTGGTGCGTGTACGTGCACGCGCGT
CGATGCCGGGATGTTTGGGGGTGGGGCGGGTGGCGCTCCGTGACTTTTCT
TTCGTGCAAAAGTGGTGCCGGACGTGGCCGGCGGCATGACGGAGGACAAG
GTGCAGGCCAAGGCGTTCGAGCTGGTGTTTGCCTTCGATGAGGTCATCAC
CACAGGGGGGCACAAGGAGAACATCACCCTTCAACAGGCGAGCGAGCACG
CAACAAACAGAAAACAGAAAATAGAACACAAGTCGCGGGAAACCAATCCC
GGCGAGAGGAGCCGCCGTCTTAAAAGCTTGCCCACACGTGCCCTGACATT
TTGAGGGTCTCACGGGGAGTGGGGGAAGGACGAGAACAGGGGAGCCGGGA
GGAGGGATGGGGAGACGAGGGGACAGGGGGGCTAGGGTATGGCATGAAGG
TTATCATTACCCGAAGGTTTCATCACGAGGCACGTTGGATGCACGTGCAG
CCTTGCAGCTGTATCACACAAAAGCCGTCGTAGCGTATTGTTTGTTGGAG
AgGGGAGGGGgaGGGGGTCCATCTGAGGGCGTGGGGTTCGGGGTGGAGAG
GGGATGGATTTGGTGGGCACGGAAATCTCTCCAGTGGTATGTCAGACGGG
TTGGAGCAGGACAGGGGAGTCCAAAGATCTTGCTTTGCTGAGGGCTTTCG
TTGTACAAGTGGCCTCGCCGATACATCGCTGATCAATGATTGTAATCGCT
TTTCGATGATCTGTGACCGTTTGCCCTTCGTTCCCATATGGCGACTCACG
GTGCGTTGCCACTTCAGCTGTCTTTTGGCCGGGGCTGTTGCGATATGTGC
CCCTCTTGCTGTCGCCACGGTCGACGCACTCGAGAATATTAATGGGGGAT
GCGCGGTAGTCTTTCGCTCCTGTTCGATTCGTTTCGTTCGGGGTAGATGG
ACCGCATGGCTGCTTGGGCAAGTTACATCGCGCTGGAGTGCAGACGGCAC
GATCAATCGTCGCCTGTCTCGCTCAGGGTTACACCCCGTGCTCGTCCAGT
TTCAAAACGAGTGTCTAATGTTGAACCCGTCACTTGCCTATTGTGTGCTC
GTGCGTTTTTCCGCCACGTTGGGTGTCGGGGGCGACGGGGTCTGCCTTTG
GGCGGGTTCGGGGGTGTCGCTACTGGACTGTGCAGATAAGGACCAACATG
GAGATGGACTCGCACGAGGAGCGGCTCCACAACATGATCCAGGACAGTAA
GAGAGAAGCCGCCAAGGAGGAGGCCGGCCGGAGAGCGAAGGAGCTCCGCG
AGAAGGCCAAGGAGGCGGTGAGATACACCCCGTCTCTGTCCCCTTTCCAT
TTTTTCCCCCCCAACATTTTCTCGTGATAAAACGTCAACATGAAATCGGG
AGGACACACCCAACCGAAACGAATTAAGATTTGGGAGCCGGATACCCCAC
CGTTTTTAATTCGTGTCTCGGTTTCCGCTCCTCGTATTAAGAGCCCAGCC
CGCGTGTAGTGCCACCGCTTCGGGTGTGTGGTCCCGACGGAGCGCGCACT
TGAGCACAAGTTCGTGGACGCTCCGGTCTGCTCAGGTGGTGTCGCCATTT
AGCATGCAAAAGGGTTTGATTGAACGAGCTTGCCTTGGGCGTGCGCTGTC
AGAGGAAATCGTAGTATGTTGCGGCGTCGAACCGGATTCTGTTGTGCGCG
AAAAGCGCACGGACGGATCACGATCCATTCCCCCGCTGGACCGTCCCCCT
GAGCGATTTCGAGGCGGGTTAGACGATCCCGCCTTAATTTTTGGGGGGTT
CTCGTTTGCTAGTGAGATGACGGCGTGTTCGGGTGCGTTATGTGCTTCGC
TCCTCCTGCGAGGGGGCTGCTGTGTGGAAGTTTCGGAGTGCCCCAACTGG
CGAAAATTTCGGTTAGGCAGCAACAAAGGACGAAGGTGTGGATTTGCTGC
TGGAATTGAGCACAACGAGCACCTGAAAAAAACAGCATGAAGTAGCGGCA
GGGGTAGGAGTGCGCCAATATTCCCGTGATTGCGTGCTTCGCCGCCACTT
CTCTGCTCCTATTGTCAAGTACCAAACCTGTCGAAGCGTGCGTCTGCCCT
GACCTCTTCTCACACCGAATTCCCCTCCCGACCTTTTTCCGGAAAAACTG
TTCCGCAGAGCCTCCGCGGGACGGGTATGGGTGGCGGCGGCATGGGAATG
AGCGGCTCGTCCATGTACACCGAGGCATCGGACTACGGGGTGACTAGCAT
GGGGGGGGGGCAGGGCTTCGGCGGCGGTGGCGGCGACGGTATATCCAGCG
CATCAGCGGCGAGCTTTTCCACCCCCTCCGCAGGGTTCGCGTCGTCTTCT
CCGTTGGTGGACACCCGTGTCTCAACGCAGGTACGCTTTGGCGGGGGTGG
GCGCAATTCACATGAGAGGGAGGGTAGGGTGTCTACATTTTGGGTCATTT
TAGCCTTGACCGTTCATCCCCCTCGAGACGAGTACCGTTCAAGTTCCGGC
GGAGTCAACACTGAAGTCGATTTTTTCGGCATTCTCTGTTGCGAAATGTG
ACGAATGGGATGCGTCTACACGGACGAGTTCGCCCGAGGTTGCAGCCGTG
GGATGGAAGTGTTGACGCTTGAAAAAAGAACACGCGCAGGTGCTCGAGTG
CGTGTCGACGACGCCGGTCTGCCTTAACCCGTTGTCGCCATTACTACGAA
CATTTCGGGCAGACCGACCGGCTGCTAGTTGAGTCTCACCACGAAGCAGT
AGCTGGTGAAGTCGAAACGGCAGGCACTTAGTACTCGATCGTTGTGCAAC
GGTTCCGTTCCGTTTCTTTTTCTCGCTCCATCTTAATGTTTTCTCTCTGC
CCCTCTCGCTGACATCTCTGTGGATCTCTTGATCACTGGCTTTCGAACCC
CCCACCCTTCCACAACCGCCCTCTCCCTTCTCCGACCCCCTTCCCTCTTT
CTCCCTGCAATCGTCCGCCTTGTGACATCTCGCTTGAGCAGGGGATGAAG
CTCGGAGGGGCGTCCAAGAGCAAGAACATCCTTGACTCGCTCATCAAGGA
AGACCACCTCGTGTCCATCCCGTCCGCGACGAAGGCCAAGGCGGGCGGCG
CCGATGCGGCCGTGCCGGCGGCCGTCGTCGCCGCCTCCGTCCACCCCGTA
ACGCTCAGCGTAGAGGAGCGCCTCAGCTGCCAGGTACGTAGTGGGTTGCG
TGTGCCCCCCCCCCGAGAAAACAGAAAATCAGGTTGATGTGCGTGCTGGG
CTTGTCGCACGCCGCACGCCCTTGCCCTGTAGTTTCTGGGTTTTTCGTGC
TGTTGTGATGCCACTGTTGCCTAGGACTTGGCGTTGTGTTTTTTTTTGCC
CTTGGTCCAGCAGTCTTGGGAGTCCATGGCATACCCAAGCAGTTGGCAGC
TGTACGTAAGGCGATGTGTGGTGGGTCAATTCGATTTAATCAGTATGACG
GTCGGGGCAGTGCCTCGAGGTCTTCTTCAATTTGTTAAAACTTACGTGCC
TGAGTCCCAAATCACACACTGGTCTGTTTCCGATTGCGGGGAGAACTTTC
CCAAAACAGCCCTGTTTTTTTGTGTTTGCTCCTTGCAACAACCGTAGACG
TGCCGCGCGCATCATGAGCTCACAAACGCTACAAGACGCACCACCGACCT
ATCACGTCCTAAATCCACGCACGCCCTGAACCACTCTTTGCCCAATCTGC
CTTCCCGATCCGTGGTTATTTGTTCATCGGGGGCGCCGTCACTGGTTTAA
CTCGGTTCCTCGCCGCGCGCACAGCTTACCCGAGAGGGCACGCTGGAGAG
CATGGAGGTGAAAGGGACCCTGAGCCTGACCGCGAACAGCGACGGCGCAA
ACAAGTGCAAGGTGGTGCTGGCCTCCACCGACCCCTCCGGGGTGTTCACC
TTCCAGACACACCCCAAGGTAGCGCATCCAAGTAGCTAGATTCCAAGCGA
GTTCGACAAGCCGTGCTGGATGGTCTTAAATCGGTCTTTCGATTTTATCG
GACTGAGGAGACATGTTGTCTTGTAATGATTTGCAATGAGCTGGTTTGAC
TCTCTGTAAATCGGCCCATCCTCTTCAAGAATTGGTCTTAAAAGTCGTCG
TGGGCACTACTTCAGCTCTCGCGCACACCCGGGTGGCAAAGAGGGTTCCG
TCCTTAACGTACGTTTGGGATACCCACCCCTTTTTCGAGTTTTTCTCTTG
ATCGCTGAGCAAGAAGAATATCGCTAGGGGTGACCGTCTTTCAGTCGACG
CCGTTGTGGACGAGAAGGTCCCGTCCTGAGAAGGTTCCGTCCTTCACGGA
CTTTTGGTATACCCCACCCTTGAAGGGTAGGATCTACACCCGTGTGCCGT
CATGATTGTCTTCTGGAAAGGGAAACTTGCGGCTTGCCCCGCCGCCCCCT
CCGCGAGTTTTGCACACCCCGTCATCCCGACCCTCGGGCGCCGAGAGCTC
GCTAGATTGCTGCGGTGATCATGTGAAGAGGATGAGCGCTAAGAAAGTGT
GCAGCCGAGCCGCAAGCGGGGGACACCCCGCCACGGGAGTTCAACTTCGG
AAACATGCTGTTGGTCCGAGAAGAAAACTGCCGAGGTTTTGTCGCACGAT
CTACGAGGGCCGTTTCGCTCCTTGAAACTTCTAGCGTCGGTGGCACCAGT
TGTCGCAAATGTGGTACGGTGGTGCGGGTTGTCGGAAATATGATGTCGTG
GGTCGTGATGCAATCAATGTGAACGGGCTTGCGTCGTGGAAAAACAATCC
TTGCTCTGCTGGGGCGAGCTGCTGATCGGGTATTCATCTGGAGAATCCCT
TCCTTTCCGTGTCTGGTTGAAGCAGCGAGTAGTATCAACGTAGCTGTACT
CCACGGCCGCAGCCTCATCGGCTGCCAGACATGAGGTACCACAGAGCTTC
GCTTGCGGGGAATACATGTCCAGCTGCGGATTGCGATTGGCTCAACTTTT
TTGTCCTTCGTTCGTTTCGTTTTGTCTTTCTTTTCTTCCACGCGAAATAC
TCTGCTCCGTCCCCAGGTGAACAAGGCGATGTACGACTCCGCCAAGACCT
TGGCATCCAAAGACCAGGCCAAGGGCTTCCCAGTGGCGCGGCCGGTGAGA
ACGGGGTTGGCCGAGGAACCGCAAGATCGCGTGCGTTTTCGGTCTCAAGA
CTAGGCGTCGTCGGAGAGGCAGTGATTGTTCTCGTGATGATCGATTTGCG
CGCATACTTGGCCAGCTTTCCTCTCGATCGCTGTCTTCCTTCACTGGTTG
TGCGCTGTCCGCCCCCGCCCGCCCGCCCGCCTGCCCGCTTACGTAGGCAT
ATCTGTCGTCGAATGTTTTCGGCCTGATTTTTTTTTCCCTCCTCTTGTTA
TCGATTCGTCACACTGCTCGACTCCTCACCGCACCCTTCTCGCGTCGACG
GATGGGACGGTTTACGACGCCACACAGGTCGGTGTGCTCCGCTGGAGCCT
CAACACGACGGACGAGTCGCAGATGCCTTTGACGATCAACTGCTGGCCGG
AGGCGGAGGGCGGGGGCCAGATGAACGTCAGCATGGAGTACGAGCTGGTG
AGAGACCCACGACATGTCCTCTTTCACGGTTGTTCGAACGCGCTGGGGTT
GAGCTTTCTCGCTTGCTGTTCTCCTCGTTCCGCGGCTGTCGGGACGTCCG
CTAGCCTGGGAGCTACTGCTTTCTCTCTGCTGCTTTTTTCAACTGCGAGG
GCCATCATACCCTCGGTTCATGGACACCGCACGGCGGTGGGGCGTGGTTT
ATATTGGAGTAGATTTGGCCCTGTTAGTGGCCCGATACACTTCCGAACAC
TCAATTTTCGGAGGGTCGGTGTTGAGGGTATGGTAGACGATCAGTGAGTG
CCCTGTCCGGCCCCGCCTTTTGGGAGACCGCGCATGACTTTGTACATGAA
GACAAGCGAGAGACCTGCTTTGGTGTACAGCGTACGCTGTGAAGAAGCCG
ACACCAGCAGTTGCCGGGAGAAGTGTGCGCGGTGATTGTCCGGATCGGGG
ACGGTGGAACTGTGCCTCGTACCGTGTGGGCGTACCGCAGATTTAAGGCA
AGGGGGCGCCGTGGACTGGTGGTTACCAAATGCTGAAGTGTTCCACTTGA
AAGCATAAAAAAAAACGAGCGTGCTTGCTCCCCGCTCGCCCACCCCCCTC
CTCCCGCCTCGCCTCTGTCTCGCTTGCTTGATTGCTTGATTGCTTGCTTG
CTTGCTTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCCGCCTGCCTGCT
TGCCTGCCCGCCTGCCGGCCTGCTTCCTTGCTCGCTTGCTCGTTCGCTTG
CTTGCCTGCTTGCTTGCTTACTGGCTGGTCGTTCTCTTGTTTGTTTGGAC
ACCTCGCCTGTCCTCGAGCTTACCCAGCTTGCCTGCTTGCCTGCCCGCCT
GCCTGTCTATCTGAATGACTGTCGCCCCCGCCCCCCCCGCTCCCGGTCTC
GCTCTTTTGCGTTTGTCGTCAGGTCCGGCCCATGGAACTCCACGACGTGC
GTATAAGCATCCCCCTCGGATCCTCGGCGGTTCCGGAGATCGCCGCGATC
GACGGCTCCCACCGCCACCTCGTGCAGGAGGGCACCCTGCTTTGGACGAT
GGACCTGCTGGACCAGTCTAACCGCACCGGCTCCCTGGAGTTCAACATCT
CGTCCCGCGACCCGGAGGCGTTCTTCCCCATCACGGTCACCTTCGGCTCC
AGCCAGCTCTTCTGCGACGTGCAGGTCAGCCAGCAGCCTAGCCTTGTTTA
CTTGCTATTTTTGCTTTGTTGTCTTTGCTGTCGTTGTTGTTGCTGTTTGC
GTTCGTTTGGTGTCCGCCAGCTCCTTGTTTTTGCTTGCGGGGTTGATGGC
TTGATTATTTTCCTGGGTATGCGGAAAAGTCGCTTCATGGCTTGTAAGAT
CGGTCTAGTTTCTGTTGTAGTTTTTTTGAGGTGGGCAGGAGGCGGGGGGA
AAGGGGGTGACTTCCGTTCAGTGGTGGCGCTTGTCTCGGTGCTGAACCAC
GCGGGAGGAACGCTATGTTGATCGGTGTCACGGCTTCGTGTCAAGGAACT
AAGATGAAGTGTTGGCGTTCCGCGTGATATCGTCGGACATGATGCAAGCA
GCACCCGTGCCTTCTTCCGTACCCTGACCATGGTTGTCGGCATGATGAAT
CGGCAGCAGCAGGAGCAGCAGCAGTAGCAGCAGTGGTATCTGTAATGCTA
TTTTGGGCAGCTCGGCCTCAGGCGAGATACCTCGAGGAGGACACCTGTGT
TCACACGGTCTAAGCGAGCGCCGTCCCTCCCCCGCTTTTGGCCTAGACAT
GTGCGCGTATAATTACGCGCGCGTCCGGCCTCCGGGTCTCGTTCTGGTTC
ACCCCGCCGCCGGCTTGCTCACAGCCAATCGACCTTGGCCGACTTTTGTC
TATGTTTGGGGTTTCCGCTTAGCCTAGACCTTCCCGTGTGTGCTTGATAC
CCTCATTCTATATATATATTTATATTATCATGTACCTCCCAAAATTGCCG
CGCTGAGACGCGCCGCCGCCGCTACCTTCTTGCGTCGTGACTCCGTTCTT
TTTCTCTCCCTCTTGCCCCCGCTTGTTTCTTGTTGTATTTTATTTGTCTG
GTACCCGTGTCCCGAACAGGTTGCCGGCGTCGTCAGCACCGAGACCGAGG
CGCCGATCCAATACGGCCTCACGGCATCGCTCACCGCCGACACTTACACC
GTATCGTGAGCGCACCTGCGCGCGCTTGCGCCTCCACAGCCAGCCTTGGA
CTGTTTCCGTCTCTCGACCGCCATTCCGCAGGCGGGGCGAAAGTGATATC
GGCAAGTTGATGTAGTGCAAGGCGGTTGGCGGGAGGTGTTGGCGGGCAGG
TGCCAATAGTAAGCAGAACGAGCTGAGAGCGTGTCGTGGTAGTGTTACGT
GGTCCAAGTCTGGGATGCATGTTTGTGCCGTGTTGGGAACACCCATCACA
GGGCCCAACGCGGCTAATATTGCCTATTGCCGCCCCCCTTGGCCCGTGGG
GCGGTGCGAGACTGCGCCTCGCGCGTAAGCCGCTGCTATACTGCTTGTCA
GTATTGAGCAATAGAGCGGGAGCTGGTCGGATTGACGAGAGCATAACGAA
CGGCGATCGTTTTGGTCGGAGAGCTGTGCCGGTGCACGCATGCACCGAGA
GAGACGGGTATTTATCGTGTCTTGTTTTGCCAAAATGTTCCGCGACGGTG
ACGCATCCCGTGAGTCATTTTTTCTTTTGCGCTGCATATCAGCCGGTTTT
GGTGTGTGCGACTAGCTTCATTTGGTGCACAGCTCGCCCCCGCTGTGACC
TGCGATCACTTTTCTCTGGAAGTTGTTCAGGTCATCGGGATATTGCTATT
GAGTCTGCCGGAGTTCATGTGAAACAAATGTTGATGTTTGTGCGAGGATC
GCTAAATTGCCCGGAGACTTTTGCGGCTTCCCTTGCACGTGCGTGGGGTC
TACGGCCATGGCCATGTCGTGTCGTAATGTCAAATCAACGCGTCACTGAA
GACTAATGTGGGGATCCAAATCGCCAAACCGGCGACACGTACGACTATGG
GTGGAAACAACACCAAGCAAGTGTGTCTCTATATTGCCGATTGGATGGTG
CCGCTACCAGTAATAGTGCCGATTTCAAAGCAGGAGGGTGCGCTCGTACT
ACAACCTACCACCCTGTTCGAGACGGTGCCGGTAGCCACCAAAGTGTATG
GGTCACATCTCCGGGCACATGCCCGCAATGTTAGAGCCCGCACGAAGACA
CGAAGACACGAAATTTCAGGAAAGGTCCGATTGCGTCTCTCCAGACTTCA
AGCATGTGTGTGGGAAAGGTGAACGCCTTAAAGCACCATGGCAGCGGTGC
CTAGGATTCAGAAGCGAATTGATTCCCAGGTATCTATCTTCAGGAGAAAA
CCCCCACCCCTCAAACGCGGATTTTGTTTCTCTAAGGTATCCTCATTTTG
CTGGGGGGTTCTCTCACGTAGCCGGGTCTGTCTACGTTGCAGTTTCACCG
CCTCTGAAGCCGCTCACTCAACGTCACGTTTGCTCCATTCGTACATGCTC
CTGC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig22:784617..797120+

>mRNA_P-fluviatile_contig22.4796.1 ID=mRNA_P-fluviatile_contig22.4796.1|Name=mRNA_P-fluviatile_contig22.4796.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3330bp|location=Sequence derived from alignment at P-fluviatile_contig22:784617..797120+ (Porterinema fluviatile SAG_2381)
ATGATGGTGGTTCTCTCTGCGTCTATCACCACAAGAAATGGGAAGGCCCT
GCTGGCACGGCAGTTCGTGGACATGAGCCGCATCCGCATCGAGGGGCTCC
TGGCCGCCTTCCCCAAGCTAATGGGCACCGGTGGTTCTCTCTGCGTCTAT
CACCACAAGAAATGGGAAGGCCCTGCTGGCACGGCAGTTCGTGGACATGA
GCCGCATCCGCATCGAGGGGCTCCTGGCCGCCTTCCCCAAGCTAATGGGC
ACCGGCAACAAGCAGCACACTTTTATCGAGACGGATACCGTTCGGTACGT
GTACCAGCCGCTCGACAGCCTGTTCCTGCTACTCGTGACCAACAAGGGCA
GCAACATTGTGGAGGATCTCGAGACCCTGCGGATGCTCTCCAAAGGCAAC
AAGCAGCACACTTTTATCGAGACGGATACCGTTCGGTACGTGTACCAGCC
GCTCGACAGCCTGTTCCTGCTACTCGTGACCAACAAGGGCAGCAACATTG
TGGAGGATCTCGAGACCCTGCGGATGCTCTCCAAAGTGGTGCCGGACGTG
GCCGGCGGCATGACGGAGGACAAGGTGCAGGCCAAGGCGTTCGAGCTGGT
GTTTGCCTTCGATGAGGTCATCACCACAGGGGGGCACAAGGAGAACATCA
CCCTTCAACAGGCGAGCGAGCACGCAACAAACAGAAAACAGAAAATAGAA
CACAATGGTGCCGGACGTGGCCGGCGGCATGACGGAGGACAAGGTGCAGG
CCAAGGCGTTCGAGCTGGTGTTTGCCTTCGATGAGGTCATCACCACAGGG
GGGCACAAGGAGAACATCACCCTTCAACAGGCGAGCGAGCACGCAACAAA
CAGAAAACAGAAAATAGAACACAAGACCAACATGGAGATGGACTCGCACG
AGGAGCGGCTCCACAACATGATCCAGGACAGTAAGAGAGAAGCCGCCAAG
GAGGAGGCCGGCCGGAGAGCGAAGGAGCTCCGCGAGAAGGCCAAGGAGGC
GGACCAACATGGAGATGGACTCGCACGAGGAGCGGCTCCACAACATGATC
CAGGACAGTAAGAGAGAAGCCGCCAAGGAGGAGGCCGGCCGGAGAGCGAA
GGAGCTCCGCGAGAAGGCCAAGGAGGCGAGCCTCCGCGGGACGGGTATGG
GTGGCGGCGGCATGGGAATGAGCGGCTCGTCCATGTACACCGAGGCATCG
GACTACGGGGTGACTAGCATGGGGGGGGGGCAGGGCTTCGGCGGCGGTGG
CGGCGACGGTATATCCAGCGCATCAGCGGCGAGCTTTTCCACCCCCTCCG
CAGGGTTCGCGTCGTCTTCTCCGTTGGTGGACACCCGTGTCTCAACGCAG
AGCCTCCGCGGGACGGGTATGGGTGGCGGCGGCATGGGAATGAGCGGCTC
GTCCATGTACACCGAGGCATCGGACTACGGGGTGACTAGCATGGGGGGGG
GGCAGGGCTTCGGCGGCGGTGGCGGCGACGGTATATCCAGCGCATCAGCG
GCGAGCTTTTCCACCCCCTCCGCAGGGTTCGCGTCGTCTTCTCCGTTGGT
GGACACCCGTGTCTCAACGCAGCAGGGGATGAAGCTCGGAGGGGCGTCCA
AGAGCAAGAACATCCTTGACTCGCTCATCAAGGAAGACCACCTCGTGTCC
ATCCCGTCCGCGACGAAGGCCAAGGCGGGCGGCGCCGATGCGGCCGTGCC
GGCGGCCGTCGTCGCCGCCTCCGTCCACCCCGTAACGCTCAGCGTAGAGG
AGCGCCTCAGCTGCCAGCAGGGGATGAAGCTCGGAGGGGCGTCCAAGAGC
AAGAACATCCTTGACTCGCTCATCAAGGAAGACCACCTCGTGTCCATCCC
GTCCGCGACGAAGGCCAAGGCGGGCGGCGCCGATGCGGCCGTGCCGGCGG
CCGTCGTCGCCGCCTCCGTCCACCCCGTAACGCTCAGCGTAGAGGAGCGC
CTCAGCTGCCAGCTTACCCGAGAGGGCACGCTGGAGAGCATGGAGGTGAA
AGGGACCCTGAGCCTGACCGCGAACAGCGACGGCGCAAACAAGTGCAAGG
TGGTGCTGGCCTCCACCGACCCCTCCGGGGTGTTCACCTTCCAGACACAC
CCCAAGCTTACCCGAGAGGGCACGCTGGAGAGCATGGAGGTGAAAGGGAC
CCTGAGCCTGACCGCGAACAGCGACGGCGCAAACAAGTGCAAGGTGGTGC
TGGCCTCCACCGACCCCTCCGGGGTGTTCACCTTCCAGACACACCCCAAG
GTGAACAAGGCGATGTACGACTCCGCCAAGACCTTGGCATCCAAAGACCA
GGCCAAGGGCTTCCCAGTGGCGCGGCCGGTGAACAAGGCGATGTACGACT
CCGCCAAGACCTTGGCATCCAAAGACCAGGCCAAGGGCTTCCCAGTGGCG
CGGCCGGTCGGTGTGCTCCGCTGGAGCCTCAACACGACGGACGAGTCGCA
GATGCCTTTGACGATCAACTGCTGGCCGGAGGCGGAGGGCGGGGGCCAGA
TGAACGTCAGCATGGAGTACGAGCTGGTCGGTGTGCTCCGCTGGAGCCTC
AACACGACGGACGAGTCGCAGATGCCTTTGACGATCAACTGCTGGCCGGA
GGCGGAGGGCGGGGGCCAGATGAACGTCAGCATGGAGTACGAGCTGGTCC
GGCCCATGGAACTCCACGACGTGCGTATAAGCATCCCCCTCGGATCCTCG
GCGGTTCCGGAGATCGCCGCGATCGACGGCTCCCACCGCCACCTCGTGCA
GGAGGGCACCCTGCTTTGGACGATGGACCTGCTGGACCAGTCTAACCGCA
CCGGCTCCCTGGAGTTCAACATCTCGTCCCGCGACCCGGAGGCGTTCTTC
CCCATCACGGTCACCTTCGGCTCCAGCCAGCTCTTCTGCGACGTGCAGGT
CCGGCCCATGGAACTCCACGACGTGCGTATAAGCATCCCCCTCGGATCCT
CGGCGGTTCCGGAGATCGCCGCGATCGACGGCTCCCACCGCCACCTCGTG
CAGGAGGGCACCCTGCTTTGGACGATGGACCTGCTGGACCAGTCTAACCG
CACCGGCTCCCTGGAGTTCAACATCTCGTCCCGCGACCCGGAGGCGTTCT
TCCCCATCACGGTCACCTTCGGCTCCAGCCAGCTCTTCTGCGACGTGCAG
GTTGCCGGCGTCGTCAGCACCGAGACCGAGGCGCCGATCCAATACGGCCT
CACGGCATCGCTCACCGCCGACACTTACACCGTATCGTGAGTTGCCGGCG
TCGTCAGCACCGAGACCGAGGCGCCGATCCAATACGGCCTCACGGCATCG
CTCACCGCCGACACTTACACCGTATCGTGA
back to top