mRNA_P-fluviatile_contig22.4794.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig22.4794.1
Unique NamemRNA_P-fluviatile_contig22.4794.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig22.4794.1 vs. uniprot
Match: D7G718_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G718_ECTSI)

HSP 1 Score: 356 bits (913), Expect = 3.050e-118
Identity = 164/208 (78.85%), Postives = 187/208 (89.90%), Query Frame = 1 
Query:    1 MAKAGEGLFTKYIPKGIYEKIRNVLEFKPKDPNRGWQVPAANAPTPGLKG-TEYRNPAPNSQPQAKVPVSDNPDLIYDITYYKRDTRRAPREIYTYVAPSLRLLADERAKALELISNQVGPEEPPPSQGNKNPAVMKYDPTGLRTTMTTSNEAWKKSVQEHMPNHNVKPFWWHSDVDYIAEMQAKGLPPPPGRPMNWEVPDAAKVASW 621
            MAKAGEGLF KYIPK I+EKIRNVLEFKPKDPNRGWQVP A A TPGLK   EYR PAPNSQPQA VPVSDNPDL YDI Y+KRDTRRAPR+I++YVAPSLR+LADER KALELISN++GPE+P PSQGNKNPAV+KYDPTGLR+TM+ +NEAW +S++E+MP HNVKP+WWHSDVD++AE QAKGLPPPPGR M+WE P ++KVASW
Sbjct:    1 MAKAGEGLFKKYIPKDIHEKIRNVLEFKPKDPNRGWQVPPAKAATPGLKAKNEYRTPAPNSQPQANVPVSDNPDLQYDIGYFKRDTRRAPRQIHSYVAPSLRMLADERVKALELISNELGPEDPAPSQGNKNPAVLKYDPTGLRSTMSATNEAWTESLKEYMPTHNVKPWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPKSSKVASW 208
[Close]
BLAST of mRNA_P-fluviatile_contig22.4794.1 vs. uniprot
Match: W7TSB3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSB3_9STRA)

HSP 1 Score: 140 bits (354), Expect = 3.110e-35
Identity = 72/196 (36.73%), Postives = 110/196 (56.12%), Query Frame = 1 
Query:   37 IPKGIYEKIRNVLEFKPKDPNRGWQVPAANAPTPGLKGTE-YRNPAPNSQPQAKVPVSDNPDLIYDITYYKRDTRRAPREIYTYVAPSLRLLADERAKALELISNQVGPEEPPPSQGNKNPAVMKYDPTGLRTTMTTSNEAWKKSVQEHMPNHNVKPFWWHSDVDYIAEMQAKGLPPPPGRPMNWEVPDAAKVASW 621
            +PK +  KIR+   F+P D N  +  P      PG++  + YR PAP S+P+  VP S++ D +YDI Y+  DTRR P E++++     R+   +  +  +L+           S GNKNPAV+ YDPTGLR+ M+ +N+  +K++   MPNHNV+  W   +   + + +AKGLP PPG+   + VP  A    W
Sbjct:   25 LPKDMQTKIRSWALFRPDDINDLYPFPRNRISYPGVERIKGYRYPAPGSRPKVNVPQSESDDKLYDIKYFDHDTRRRPAEVFSWSPDFKRVALPDSPEPAKLMG----------SPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210
[Close]
BLAST of mRNA_P-fluviatile_contig22.4794.1 vs. uniprot
Match: A0A8K1C7T1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7T1_PYTOL)

HSP 1 Score: 135 bits (340), Expect = 1.910e-33
Identity = 77/201 (38.31%), Postives = 112/201 (55.72%), Query Frame = 1 
Query:   25 FTKYIPKGIYEKIRNVLEF-KPKDPNRGWQVPAANAPTPGLKGTEYRNPAPNSQP-QAKVPVSDNPDLIYDITYYKRDTRRAPREIYTYVAPSLRLLADERAKALELISNQVGPEEPPPSQGNKNPAVMKYDPTGLRTTMTTSNEAWKKSVQEHMPNHNVKPFWWHSDVDYIAEMQAKGLPPPPGRPMNWEVPDAAKVASW 621
            +   +P  + +K+R +L F +    ++  Q+P A          +YR P+P SQP  A VP SD  + +Y+I YY RD RR P      + PSL  +  E AK  E +S          S GNKNPAV+ YDPTG R+ M+T++EA  K + ++M  HNV+  W   + + + E +AKG+PP PGRP  W++PD A+V  W
Sbjct:   12 YADLLPPQLRQKLRELLVFTEATGSSQPGQIPTAEQ--------KYRYPSPTSQPGSAHVPSSDGKERVYNIQYYTRDIRRMPFPTEVGMHPSLGYV--EPAKLPEGVSRG--------SPGNKNPAVLAYDPTGTRSAMSTTHEARDKLIIQNMSTHNVRMAWEAQEEEILKECEAKGIPPVPGRPFEWDMPDVARVNRW 194
[Close]
BLAST of mRNA_P-fluviatile_contig22.4794.1 vs. uniprot
Match: M4BYT1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYT1_HYAAE)

HSP 1 Score: 122 bits (305), Expect = 1.790e-28
Identity = 76/202 (37.62%), Postives = 108/202 (53.47%), Query Frame = 1 
Query:   25 FTKYIPKGIYEKIRNVLEFKPKDPNRGWQVPAANAPTPGLKGTEYRNPAPNSQPQAK-VPVSDNPDLIYDITYYKRDTRRAPREIYTYVAPSLRLLADERAKALELISNQVGPEEPPPSQGNKNPAVMKYDPTGLRTTMTTSNEAWKKSVQEHMPNHNVKPFWWHSDV--DYIAEMQAKGLPPPPGRPMNWEVPDAAKVASW 621
            + K +P+ +  K+R VL F      +  QV  + A + G     YR P+P+ Q +   VP SD+ D IY+I YY RD RR P  +   + PSL +  ++RA        ++  +    S GNKNPAV+ YDP+G R  MTT++EA  K + +H+  HNV  F W  D   D +   +AK LPP PGRP  W  P  ++V  W
Sbjct:   15 YQKLLPEALRNKLRKVLVFTEATGTK--QVNQSPAMSQG-----YRYPSPDKQAEGVFVPTSDSKDSIYNIQYYTRDIRRLPFPLEVGMHPSLPV--EKRA--------EIPADAKRGSPGNKNPAVLSYDPSGTRAAMTTTHEARDKLLLQHVSTHNVH-FEWEGDAEKDIVENNEAKNLPPTPGRPFVWNFPAQSRVMRW 198
[Close]
BLAST of mRNA_P-fluviatile_contig22.4794.1 vs. uniprot
Match: A0A0P1AK58_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AK58_PLAHL)

HSP 1 Score: 119 bits (299), Expect = 1.220e-27
Identity = 74/202 (36.63%), Postives = 108/202 (53.47%), Query Frame = 1 
Query:   25 FTKYIPKGIYEKIRNVLEFKPKDPNRGWQVPAANAPTPGLKGTEYRNPAPNSQPQAK-VPVSDNPDLIYDITYYKRDTRRAPREIYTYVAPSLRLLADERAKALELISNQVGPEEPPPSQGNKNPAVMKYDPTGLRTTMTTSNEAWKKSVQEHMPNHNVKPFWWHSDVD--YIAEMQAKGLPPPPGRPMNWEVPDAAKVASW 621
            + K +P  +  K+R +L F      +  Q+  + A + G     YR P+P+ Q +   VP SD+ D IY+I YY RD RR P  I   + PSL +   E+   +   + +  P       GNKNPAV+ YDPTG R+ M+T++EA  K +Q+H+  HNV+ F W  D +   + +  AK LPP PGRP  W  P  ++V  W
Sbjct:   15 YQKLLPAELRNKLRKLLVFTEATGTK--QLNQSPAFSQG-----YRYPSPDKQAEGVFVPSSDSKDSIYNINYYTRDIRRFPFPIEVGMHPSLPI---EKRVEIPADAKRGSP-------GNKNPAVLSYDPTGTRSAMSTTHEARDKLIQQHVSTHNVR-FEWEGDAEDEILEDCIAKNLPPAPGRPFVWNFPSQSRVMRW 198
[Close]
BLAST of mRNA_P-fluviatile_contig22.4794.1 vs. uniprot
Match: K3X591_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X591_GLOUD)

HSP 1 Score: 119 bits (298), Expect = 1.430e-27
Identity = 69/190 (36.32%), Postives = 103/190 (54.21%), Query Frame = 1 
Query:   55 EKIRNVLEF-KPKDPNRGWQVPAANAPTPGLKGTEYRNPAPNSQPQAKVPVSDNPDLIYDITYYKRDTRRAPREIYTYVAPSLRLLADERAKALELISNQVGPEEPPPSQGNKNPAVMKYDPTGLRTTMTTSNEAWKKSVQEHMPNHNVKPFWWHSDVDYIAEMQAKGLPPPPGRPMNWEVPDAAKVASW 621
            +K+R +L F +     + +Q P+ +         +YR PAP++QP A VP ++  + IY+  YY RD RR    +   V PS+   A E+   L   + +  P       GNKNPAV+ YDPTG R+ MTT++EA  K +      HNV+  W   D + I E +AK +PP PG+P  W++PD A++  W
Sbjct:   22 QKLRELLLFTEASGTKQEFQAPSGHQ--------KYRYPAPSNQPPAHVPSAEK-ESIYNTQYYTRDIRRMHVPLEVGVHPSI---AVEKRAELPKDAKRGSP-------GNKNPAVLAYDPTGTRSAMTTTHEARDKLILTRAATHNVRFAWEGKDEEIIKEYEAKNIPPVPGQPFEWDMPDRARIRRW 192
[Close]
BLAST of mRNA_P-fluviatile_contig22.4794.1 vs. uniprot
Match: D0NT33_PHYIT (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0NT33_PHYIT)

HSP 1 Score: 119 bits (297), Expect = 2.320e-27
Identity = 72/202 (35.64%), Postives = 110/202 (54.46%), Query Frame = 1 
Query:   25 FTKYIPKGIYEKIRNVLEFKPKDPNRGWQVPAANAPTPGLKGTEYRNPAPNSQPQA-KVPVSDNPDLIYDITYYKRDTRRAPREIYTYVAPSLRLLADERAKALELISNQVGPEEPPPSQGNKNPAVMKYDPTGLRTTMTTSNEAWKKSVQEHMPNHNVKPFWWHSDVD--YIAEMQAKGLPPPPGRPMNWEVPDAAKVASW 621
            +   +P  +  K+R +L F      +  QV  + A + G     YR P+P+ Q +   VP SD+ D IY+I YY RD RR P      + PS+ +  ++RA        ++  +    S GNKNPAV++YDPTG R+ M+T++EA  K + +H   HNV+ F W  D +   + +++AK LPP PGRP  W+ P  ++V  W
Sbjct:   15 YQNLLPAELRNKLRKMLVFTEATGTK--QVHQSPAVSQG-----YRYPSPDKQAEGVSVPSSDSKDSIYNIQYYTRDIRRFPFPTEVGMHPSIPM--EKRA--------EIPADAKRGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVR-FEWEGDAEKEILEDLEAKNLPPTPGRPFVWDFPAQSRVMRW 198
[Close]
BLAST of mRNA_P-fluviatile_contig22.4794.1 vs. uniprot
Match: W2QS79_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QS79_PHYPN)

HSP 1 Score: 119 bits (298), Expect = 7.980e-27
Identity = 72/202 (35.64%), Postives = 110/202 (54.46%), Query Frame = 1 
Query:   25 FTKYIPKGIYEKIRNVLEFKPKDPNRGWQVPAANAPTPGLKGTEYRNPAPNSQPQA-KVPVSDNPDLIYDITYYKRDTRRAPREIYTYVAPSLRLLADERAKALELISNQVGPEEPPPSQGNKNPAVMKYDPTGLRTTMTTSNEAWKKSVQEHMPNHNVKPFWWHSDV--DYIAEMQAKGLPPPPGRPMNWEVPDAAKVASW 621
            +   +P  +  K+R +L F      +  QV  + A + G     YR P+P+ Q +   VP SD+ + IY+I YY RD RR P      + PS+ +  ++RA        ++  +    S GNKNPAV++YDPTG R+ M+T++EA  K + +H   HNV+ F W  D   D + +++AK LPP PGRP  W+ P  ++V  W
Sbjct:   77 YQNLLPAELRNKLRKMLVFTEATGTK--QVNQSPAVSQG-----YRYPSPDKQAEGVSVPSSDSKESIYNIQYYTRDIRRFPFPTEVGMHPSIPV--EKRA--------EIPADAKRGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVR-FEWEGDAEKDILEDLEAKNLPPTPGRPFVWDFPSQSRVMRW 260
[Close]
BLAST of mRNA_P-fluviatile_contig22.4794.1 vs. uniprot
Match: A0A225X2X0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2X0_9STRA)

HSP 1 Score: 115 bits (287), Expect = 5.660e-26
Identity = 68/202 (33.66%), Postives = 109/202 (53.96%), Query Frame = 1 
Query:   25 FTKYIPKGIYEKIRNVLEFKPKDPNRGWQVPAANAPTPGLKGTEYRNPAPNSQPQAK-VPVSDNPDLIYDITYYKRDTRRAPREIYTYVAPSLRLLADERAKALELISNQVGPEEPPPSQGNKNPAVMKYDPTGLRTTMTTSNEAWKKSVQEHMPNHNVKPFWWHSDVD--YIAEMQAKGLPPPPGRPMNWEVPDAAKVASW 621
            + K +P  + +K+R +L F      +  QV  + A + G     YR P+P+ Q +   VP +++ D +Y+I YY RD RR P      + PS+ +   E    +   + +  P       GNKNPAV++YDPTG R+ M+T++EA  K + +H   HNV+ F W  + +   + +++AK LPP PGRP  W+ P  ++V  W
Sbjct:   15 YQKLLPADLRDKLRKMLVFTEATGTK--QVNQSPAVSQG-----YRYPSPDKQAEGVFVPSNESKDSVYNIQYYTRDIRRFPFPTEVGMHPSIPV---ETPAEIPADAKRGSP-------GNKNPAVLRYDPTGTRSAMSTTHEARDKLIMQHASTHNVR-FEWEGEAEKEILEDLEAKSLPPTPGRPFVWDFPAQSRVMRW 198
[Close]
BLAST of mRNA_P-fluviatile_contig22.4794.1 vs. uniprot
Match: A0A5D6XWD7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWD7_9STRA)

HSP 1 Score: 112 bits (280), Expect = 4.360e-25
Identity = 69/191 (36.13%), Postives = 103/191 (53.93%), Query Frame = 1 
Query:   55 EKIRNVLEF-KPKDPNRGWQVPAANAPTPGLKGTEYRNPAPNSQPQAKVPVSDNPDLIYDITYYKRDTRRAPR-EIYTYVAPSLRLLADERAKALELISNQVGPEEPPPSQGNKNPAVMKYDPTGLRTTMTTSNEAWKKSVQEHMPNHNVKPFWWHSDVDYIAEMQAKGLPPPPGRPMNWEVPDAAKVASW 621
            +K+R +L F +    ++ +Q P+ +         +YR PAP SQP A VP +D  + +Y+  YY RD RR  R  +   V PS+   A E+   L + + +  P       GNKNPAV+ YDPTG R+ M+T++ A   +     P HNV+  W   D + I + +AK LPP PGR  +W++PD A+   W
Sbjct:   24 QKLRELLLFTEASGTSQEYQAPSGDQ--------KYRYPAPTSQPPAHVPSTDRKENVYNTQYYTRDVRRGARVPLEVGVHPSI---AVEKRAELPVDAKRGSP-------GNKNPAVLAYDPTGTRSAMSTTHGASLLA-----PAHNVRFAWEGHDEEIIKDYEAKNLPPVPGRAFDWDMPDRARSRRW 191
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G718_ECTSI3.050e-11878.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TSB3_9STRA3.110e-3536.73Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A8K1C7T1_PYTOL1.910e-3338.31Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BYT1_HYAAE1.790e-2837.62Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A0P1AK58_PLAHL1.220e-2736.63Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
K3X591_GLOUD1.430e-2736.32Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
D0NT33_PHYIT2.320e-2735.64Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
W2QS79_PHYPN7.980e-2735.64Uncharacterized protein n=8 Tax=Phytophthora paras... [more]
A0A225X2X0_9STRA5.660e-2633.66Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A5D6XWD7_9STRA4.360e-2536.13Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig22contigP-fluviatile_contig22:747417..753925 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score354.0
Seed ortholog evalue4.8e-95
Seed eggNOG ortholog2880.D7G718
EggNOG OGs2BKX4@1,2S1JI@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_011410.1
Exons6
Model size1598
Cds size624
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815970.4885082-CDS-P-fluviatile_contig22:747416..7474761622815970.4885082-CDS-P-fluviatile_contig22:747416..747476Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 747417..747476 +
1693563905.0504625-CDS-P-fluviatile_contig22:747416..7474761693563905.0504625-CDS-P-fluviatile_contig22:747416..747476Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 747417..747476 +
1622815970.505209-CDS-P-fluviatile_contig22:750466..7505171622815970.505209-CDS-P-fluviatile_contig22:750466..750517Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 750467..750517 +
1693563905.0634875-CDS-P-fluviatile_contig22:750466..7505171693563905.0634875-CDS-P-fluviatile_contig22:750466..750517Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 750467..750517 +
1622815970.5160606-CDS-P-fluviatile_contig22:751170..7512671622815970.5160606-CDS-P-fluviatile_contig22:751170..751267Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 751171..751267 +
1693563905.072502-CDS-P-fluviatile_contig22:751170..7512671693563905.072502-CDS-P-fluviatile_contig22:751170..751267Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 751171..751267 +
1622815970.527914-CDS-P-fluviatile_contig22:751808..7519271622815970.527914-CDS-P-fluviatile_contig22:751808..751927Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 751809..751927 +
1693563905.0821788-CDS-P-fluviatile_contig22:751808..7519271693563905.0821788-CDS-P-fluviatile_contig22:751808..751927Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 751809..751927 +
1622815970.5447125-CDS-P-fluviatile_contig22:752204..7523511622815970.5447125-CDS-P-fluviatile_contig22:752204..752351Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 752205..752351 +
1693563905.091617-CDS-P-fluviatile_contig22:752204..7523511693563905.091617-CDS-P-fluviatile_contig22:752204..752351Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 752205..752351 +
1622815970.5565543-CDS-P-fluviatile_contig22:752801..7529511622815970.5565543-CDS-P-fluviatile_contig22:752801..752951Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 752802..752951 +
1693563905.2774003-CDS-P-fluviatile_contig22:752801..7529511693563905.2774003-CDS-P-fluviatile_contig22:752801..752951Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 752802..752951 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815970.5702477-UTR-P-fluviatile_contig22:752951..7539251622815970.5702477-UTR-P-fluviatile_contig22:752951..753925Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 752952..753925 +
1693563905.2885234-UTR-P-fluviatile_contig22:752951..7539251693563905.2885234-UTR-P-fluviatile_contig22:752951..753925Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 752952..753925 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig22.4794.1prot_P-fluviatile_contig22.4794.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig22 747417..752951 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig22.4794.1

>prot_P-fluviatile_contig22.4794.1 ID=prot_P-fluviatile_contig22.4794.1|Name=mRNA_P-fluviatile_contig22.4794.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=208bp
MAKAGEGLFTKYIPKGIYEKIRNVLEFKPKDPNRGWQVPAANAPTPGLKG
TEYRNPAPNSQPQAKVPVSDNPDLIYDITYYKRDTRRAPREIYTYVAPSL
RLLADERAKALELISNQVGPEEPPPSQGNKNPAVMKYDPTGLRTTMTTSN
EAWKKSVQEHMPNHNVKPFWWHSDVDYIAEMQAKGLPPPPGRPMNWEVPD
AAKVASW*
back to top

mRNA from alignment at P-fluviatile_contig22:747417..753925+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig22.4794.1 ID=mRNA_P-fluviatile_contig22.4794.1|Name=mRNA_P-fluviatile_contig22.4794.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6509bp|location=Sequence derived from alignment at P-fluviatile_contig22:747417..753925+ (Porterinema fluviatile SAG_2381)
ATGGCGAAGGCCGGCGAAGGATTGTTTACGAAGTATATCCCGAAGGGAAT
CTACGAGAAGGTGCGCTGATGAACCTGAGAATATTTCTTGCTTGCGTGCT
TTTTGTGTTCGGGTAGGTGTAGCCCGTAGGCGTTCCGTGACAAGAGACTT
GAAGGCATGACACACCTGCTCTTGTTGCCTCTGTTGAGCCAAGACCTATG
GATGAGAAACTAAGTATTGCTTTGAAGCAAATACGCAACTTTTTGCAAAA
GATATGGCTCCCTTTTCTCACCTCCTATTGATGCTACAATCAATGCGTTG
TCGACACACAACGCGGTCGAGCGGGGCGGGGCGGGCTGAGTTGGCGAACG
GGGGGGGTCTCACGAGAGTGTGTGCGTGCTTGCTGAGGAAGCTGCTTGCC
TCAGGTGTGCGATAGCGGCCATGCGAGGGAGCCAGCGGGTGAAAGGCTGC
GATGCCTAGTTGCAGTTTTCGGCGCTTGTTGTGTGTGCGTTTGTGTTTTC
GTCTCACTTATTCTGGCGAAGGTCCCCCAATTCAATGTGAGACGTTCTAC
AAATTGCCGTGCACGTAGGGCCTCTTTTTCAAAGTATTTTTCTAGACAAC
TACAACCAGTCGAGGTCAGACAGGATGGGGTAAACACCGGGGCTGTTTTC
GTCTTTGTATTTAATTCATTGCCCCACCTTCCTCCTGCGGCGCGTGCTTA
TGATCGCGAGAAGGGTTCAGCTGTCCCTTTCCCTCGTCAACAACGAAGTC
GAACCTTGTCTACTCATGCGAGGCTTTTCTCGCTTGTGGACTACCATTTG
CGAAGGCGACAAACAATCCCATTTCGTTGGGACTGGAACCCGTGACCCGT
TCGCCGTTTTCGAGGTTACCACTAGACCACCGGGGCAACCGGTTCAGAGT
GTGTGTGTGCGAAAACACACAAGCTCTATCTGACGAACCATGACAAACAG
CCGTACCTACTGTCACAAGATGTTGCCGCTATTCCGCGCCTCGCCCTAAA
CCCTGGTAAGACTATCGACCGCTAAACTGGGAAGCTCGATGACGGTAATT
AACCGCTGCAGCAGGCAAAAGCTCAATTTTTGCGGTCAGGAACCACTGTC
GTGAAGCGAGTCCTGAAAGGGTCGTCCGTGTGTGCCGTGTGGCAACAGTC
ATTCGAAGGTAGACGAAGGAGTATCACCACCCTTGATTTTAAATCACAGC
AGTAGACATGGAGTACAGTGGGCGCCCGCTGACAAGAAACGCCAAATATG
GGTCGAGTCTAAATTTCTTATTTTCGGCCAAAGATGAGCCTACGACGATG
ATTTTCTTAAATCCACTTTCTTGTTTCATTCCGGGATATTGCGTACTTTG
TTGGTTCCCGTGTGGGTTCGATCGTTTTTGTTGTTGCGTTCGGCATTGCC
AAGACGAAACTGTTTGACGGCTATCAACTCCCATTACACCACACGGCCCC
TGAAAAAAACACACGCTGTCGATAACAAGAGTATTAACGCAACCAGTGAT
ACGTATCAGTCTCGCTTCCGCTCAACACCGCTCAGCAGCACCCCCCTCTC
AACGTACCGCGCGAAATCGCCTCGGAATGGGACACCACATCAACATGACT
CCCTCTCCAGTCTTCGTTTCTTATTTGTGGAGCTGTTCTGCGCTGGTTTT
CTTATTGGGGCGTTTCTTATCTTGTCGCCCAGATTGAGCCCTGTTTCTTG
CGCAAATTTTCTTATTTTTCGGGGACAGGCGAGCTTTTTTTTCTTCCGAA
AATTTTTCTTACGAGCGGGCGCCCACTGTATAAAGAGCAGCAACCTGGCT
CTCCCCGCCGCCTCCCCGCCGGATTCCTTTCTTAGTGTAGCAGCACACTA
AACGTCTTGCGACATTTTTCTTTGGCGCGTGCTGAATACGATGTTGATTT
TGGAACCACTCAGGTACACGTCGCCCGATCGTGCGAAAAGAAATTCGAAC
AAAAAGAAAAAGTTACAGAAAATCCGAGTCACGTTCAAAGTTCGTCCTAG
CATCTGGAGAGGGTTGGAAAGTCTGCCCCTTTGTTGCACACGAACGGCAC
ATGTGGTGCATCTCGCTGTCGTCATCTGGGTCAACCTGGATCTACCTCCC
CATAAGTGTACGAAAGCGGCCACCACAGCCACTGCGACAACCCTGCCCCT
GGTTTGGACCAATTGGCGCATCCGGAGCTTTGCACAGCTCTCCATCCCCA
CACGGCATAATATGTGTCTTGTGCGTGTGCGCCTGTGTGTGTGTGGTCTC
CGCAAGTTTGAATGTTACCGCTATTGTGGGCTTGAGCCGATACGGCGGTA
CATTCCGGATTGCTGCGGTGTCACGGGATTTTGTTACCGCTTAACAAGGC
ATTGCGCTGAGCAGAGAATCGTTAAGCCGGAACCAATACTTAATGCTGCA
CTCCAGTGACATGTCGACTTAAATACGACACACAGGCAATACATACCCTT
GGCAGCGCCGGCACGAACCAACAAACCTCACCGAACTTCACCGTTCGTGC
GCCATTGCTGGATGAAATTATCGAAATCCCGGTTTCAGTCTGCCTTCTGA
GCAACTTTAACCGGGCTTGCCAATCGATCTTGCAATGGCGTCAGCTCTTT
ATTCCAGAGGCTCACACTGCTATCAAATCTGCCCCCGCTAACATGTCAGC
CACTATGCCCTGATTTGCAGTCAGCATGAGTTATCGTTGCCTTTACAGAC
CCAGTCTCTTCCAGCATATCATTTTCCGCTGGCTGGAAGCAGATTTTTTC
GCTTCATGATTCTTTCGGCTGTCCCGACGACGGCAGCAGCAGTTGACAGA
AGCGTCGGCCTTCCAACAAGCATCAATACACAAACACCGTTGGAACCGAC
CAACTGCCAACTGCGTGCGAACTAGCCCGTCCATCTGGAACCTTCTCTGT
TCACGGTCTCCGATGCACGCGTGCCGTAACACGTACGCCTTGGCGCACGA
AAAATTAAGTCCCATTGCGTAGTCTTTCTCTCGGCAATGTCGCCCACCCT
GCCTGCCTGCCTCCCTGCTTGTGAACGCCACCTTTTGTGCCTGATCTCAG
ATCCGTAATGTGCTCGAGTTCAAGCCCAAGGACCCGAACCGTGGATGGCA
AGTAAGTCAAGAAGAGGGAGTAAGTTTGCAGCCGTTTGGACCCGTGGACC
TTGCGCTGTGCTACTGGGTGCTCCTCATCTAAATTCTTTATCTCTCTTTC
GAATCATGGTGGCACCGATTTGGTTCGTCTGAAACCTGTATGTCTGTATG
TTTCACCCGGTTTTCCTCTGGAACGATCACATCATCACCCTCCGACCCCC
GCTGCTTCGAACCTTTGGTCAAGTCGATGTTGATGCCCAGATAGACGATT
GTTTAGGGCTGTGAATCGGCAGCAGCAAACAATAATACCTCTTGTGTTTG
TCGGTCTCCTCCTCTTCATCCTGCTTTTTTCATTCTTGGGCTCGTCCTAC
ATTTTTCAATCTTGGGCGGCCCGATGCGACCAAGGTCTTCACGGCGAGAA
GCAGCTTACCCGGCTAGCGATATGGAGAAGTGGACGAGAGGACTTCGTAT
GCGTTGCATGCCCACGGCGTCCTCCGAATTCTCGGCCGCCTCTGCGCAGA
CAGCGAGACAGCCGAAATCCACCAGCCCCTTCTGGCCTCTCCTCGCCCAC
GAAACTTGACCTGCGTTCGCCCCGCACCCCACCCTCCGTCTCTTGAAATC
TTCTGTGTGTCCCTCGTGTATGTATTCGTGTATTGTATGCCTGCCTGTTT
TTAGGTGCCCGCAGCAAACGCCCCGACGCCGGGGCTGAAGGGTACGGAAT
ACCGGAACCCGGCCCCTAATTCGCAGCCCCAGGCGAAGGTCCCGGTATCA
GGTAGGCGAAGAGCTAGGAGCGCGGTGATGGGGCGGGGAGTGGCGTTCCA
AACGCATTTCTTGGGGTAAATTGTTGCCATTTGCTGGTCGAGTTTTTGAT
GTAGACAACGTTTGCTGGCAATTTTCGTGTCGAGTTTCATGTTTATGATC
CGTGACAAAGGAAGAGGAGACGAGATCATTGCAACTTCAGATCACGCAAA
GAAGCAGCAATTGCGGGTGGCTCAGCCCTACGGCCATACTCTAGCCGATT
GGGCAGAGTATGATGTCGCAACATGTTCCTGCTGTTTCAGACCCGGACCT
CGGACAATCATCAGCAATCCTTTGAGTGCCGTCATCTGTGTAAACTTTTT
CTCCATCGTTCTAATGAAGCTCGCGGACCTGTCGTTGTTCTGGATGGGAA
TCCTCGAGGTTGTACCCCCCTACAACATTCCACCACCATGGCGTTGGCCT
TCGCATGTTATTTCACTGTCGTCGTCGTCTTTTCTTCGTTGTTTGTCTTC
CCTATTTCTCTCTCCCTCTCGTTCCTTCTTTATTTCTTCAAGACAATCCC
GATTTGATTTACGACATCACCTACTACAAGAGGGACACCAGGAGGGCGCC
GCGGGAGATATACACGTACGTCGCGCCATCCCTCCGGCTGCTTGCAGACG
AACGGGCGAAGGTGAGGACAAAGCACAGGAAAGGCAAGTGGCTTAAGAAT
GGTGCTAAACACAGCGGGGGCGTCAGCAGACCCCGGCAGGCTATTTTTGG
TGTTCATGGTTTTACCCGTGTAGTTCTACGAAGCATTCGCGACATGCAGC
ACGATAAAAACACTCGACTACAACAGGTCTGCCAGTCAGCTCCAGCGTGT
GCTCTCTCACACCAGCGAATTGCGTTTTGCAGCTCCGAAGCCTGATTTGC
ATTTGTCCTTTTCTGCATTTCGCCGCTCTTGATGCCAGGCTTTGGAGCTC
ATTTCGAACCAAGTCGGCCCCGAGGAACCGCCCCCTTCCCAGGGGAACAA
GAACCCGGCGGTCATGAAATACGACCCCACCGGCCTGAGGACGACAATGA
CGACGTCCAACGAAGCGTGGAAGAAATCAGTCCAGGTGCGCTTGCGGTAG
TGCGTGCCCTTTTATTCGGGGCGCGGATGCGTTGGCGAGAGTAACGGTCA
GCGAGTGCGACGGGCTTTGGTTTTGTGGAAGTGGAATTTGTGTTTTCCAT
TTGGTAGGTGAACTTGTATTGATGGTTGGGTAGTCGTGAAACTGGTACGG
CGGCAGCTGTGAAAGCACGTTGGCTCGTGAACTCGATAGTAGCAACTAGG
CAGCTGCAGCCGCAGCCGCCATCGGCATCTCCCTCCCCCCCTCCCCCCCT
CGAGCCAGTCCAAAGCACCTCATCTCGCCTGTGGACGTGGTTCATTGCTC
TCTCTCTGTCTCCCTCTCTCTCTTTTCTTGCTCTCCATGCACATGACAAA
TGTCACCTCGCATGTTCGCTCCTCTCTTTTCTCCTTCCCCCTCCCTGCCT
GCCCGTTACTCTCGCTCTCTCGTCCTCCCCCGCAGGAGCACATGCCCAAC
CACAACGTGAAGCCGTTCTGGTGGCATTCCGACGTGGACTACATTGCCGA
GATGCAGGCGAAGGGGCTCCCCCCGCCGCCCGGGCGTCCAATGAATTGGG
AGGTACCCGACGCCGCCAAGGTGGCCAGCTGGTAGACGGGACAAAGTGGC
AGACTGTCTGCGGTTCGCCTCCCCGTTTATTTTCGTTTCTTGCGAACTGT
GGCGGCGGCGGCGACGTTGACTGGTGTTGAAAATAACCCCGCTCACACGC
CCTCGCCTCCACGTGTTGCGATACAGTGGGGAGTAGGTGGCGCTGCCGGT
CGTGGCAGGTGCTGTTGGACTCGGCGACATATGTCGGGGGTTGAAGTACG
ATGAGGACGGCGTTTGGCAGCAGTGCCGCCGGGCGTTGCTGGGGGGCCAA
GCTTTTGGCAATTCTTGGGTCAAACTTGAGCACAGCGATGCCTGTGGATA
TCCTCTGTGAGGGGATTGAATTTTGCGTTGAGCCTGGGGACCCCGACGGC
GCAATCCCGGCGCGAGCTGTGAGGTTTTATCGCTGCAAAAGGAGACGGTC
GGTGCAGCGGTTGGGCGAGGAAATAGTTCCCAGGGAGGACTGTTTTGGTT
TAGTGTGGGTTTGCAAGACACTCAGAGCCCGCAGAAGGTCGAATGCAGAA
TCGTTTCGCGTGCACTCGCAACTTTCGTAGCGTTGCTGGTATTGATCTCT
TTGAGAAGCAACTTGGTCACGTCGCCCCCGGTAGACGAAGGTGGGAGTGT
AGAGAGCATTTGTGAAAGCTGTTTTTGGTTGACAGTCGAGGTTTCTGTTC
ATGCATGCAGCGTTCGACATTCAACTTTTTTGTGAGCATGGAAAATTGGA
CAGCAAAACACAAAGTGAAGCCTGTGTTGCCCTCAGAAGTTGACCAAGGT
GGTGACTTGGTGAACGAAATGTTGCCTGTGACCCTCGATTTGACAGGTCA
AACCGCTGTTCTTCACTCAGCAGACAAGAACCTGCAGTTTGCCTTCTTTT
CTCGTGTATCTGCGAAAGCACAAGACGCTTGTTTTAGTGTCAATATTTCG
ACGTGATGCATTGTGGGATACGCAGCAGCCAGCACAGCAGCTCTCGGGCA
AATCGCGAC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig22:747417..753925+

>mRNA_P-fluviatile_contig22.4794.1 ID=mRNA_P-fluviatile_contig22.4794.1|Name=mRNA_P-fluviatile_contig22.4794.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1248bp|location=Sequence derived from alignment at P-fluviatile_contig22:747417..753925+ (Porterinema fluviatile SAG_2381)
ATGGCGAAGGCCGGCGAAGGATTGTTTACGAAGTATATCCCGAAGGGAAT
CTACGAGAAGATGGCGAAGGCCGGCGAAGGATTGTTTACGAAGTATATCC
CGAAGGGAATCTACGAGAAGATCCGTAATGTGCTCGAGTTCAAGCCCAAG
GACCCGAACCGTGGATGGCAAATCCGTAATGTGCTCGAGTTCAAGCCCAA
GGACCCGAACCGTGGATGGCAAGTGCCCGCAGCAAACGCCCCGACGCCGG
GGCTGAAGGGTACGGAATACCGGAACCCGGCCCCTAATTCGCAGCCCCAG
GCGAAGGTCCCGGTATCAGGTGCCCGCAGCAAACGCCCCGACGCCGGGGC
TGAAGGGTACGGAATACCGGAACCCGGCCCCTAATTCGCAGCCCCAGGCG
AAGGTCCCGGTATCAGACAATCCCGATTTGATTTACGACATCACCTACTA
CAAGAGGGACACCAGGAGGGCGCCGCGGGAGATATACACGTACGTCGCGC
CATCCCTCCGGCTGCTTGCAGACGAACGGGCGAAGACAATCCCGATTTGA
TTTACGACATCACCTACTACAAGAGGGACACCAGGAGGGCGCCGCGGGAG
ATATACACGTACGTCGCGCCATCCCTCCGGCTGCTTGCAGACGAACGGGC
GAAGGCTTTGGAGCTCATTTCGAACCAAGTCGGCCCCGAGGAACCGCCCC
CTTCCCAGGGGAACAAGAACCCGGCGGTCATGAAATACGACCCCACCGGC
CTGAGGACGACAATGACGACGTCCAACGAAGCGTGGAAGAAATCAGTCCA
GGCTTTGGAGCTCATTTCGAACCAAGTCGGCCCCGAGGAACCGCCCCCTT
CCCAGGGGAACAAGAACCCGGCGGTCATGAAATACGACCCCACCGGCCTG
AGGACGACAATGACGACGTCCAACGAAGCGTGGAAGAAATCAGTCCAGGA
GCACATGCCCAACCACAACGTGAAGCCGTTCTGGTGGCATTCCGACGTGG
ACTACATTGCCGAGATGCAGGCGAAGGGGCTCCCCCCGCCGCCCGGGCGT
CCAATGAATTGGGAGGTACCCGACGCCGCCAAGGTGGCCAGCTGGTAGGA
GCACATGCCCAACCACAACGTGAAGCCGTTCTGGTGGCATTCCGACGTGG
ACTACATTGCCGAGATGCAGGCGAAGGGGCTCCCCCCGCCGCCCGGGCGT
CCAATGAATTGGGAGGTACCCGACGCCGCCAAGGTGGCCAGCTGGTAG
back to top