mRNA_P-fluviatile_contig22.4734.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig22.4734.1 vs. uniprot
Match: D7G6X1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6X1_ECTSI) HSP 1 Score: 538 bits (1385), Expect = 9.430e-184 Identity = 333/473 (70.40%), Postives = 376/473 (79.49%), Query Frame = 1
Query: 55 MMPARRLRAALMCACSVSVAVGFVPGAGTGCVGSRQRG--DGCTSIIPVN-AHHHRSFAGAPVVHGRPTAGKRRDGRRGGNCRRSNTVQMVGFDNTFFGVGGPEVAVILVVGYFVLGPVELVKLVKQAGVLFGQLKDLGLGTVNNLSTIVDDQIMNAEQIASGEKKPPDYYAPEEEFPMSDEDEFEEVTIDEYGRMVYDGQPEKPPPIREEDRAPFWEGLGEKISDKFNEFEQGEGPLKEASKFAQQLSGAVNEKVMGMERSGGPADG-TPNMGAEALWES-AEAAGTATAGVAAGVGVSKEWQPPTTELGMEGAPELANDVPSKLDAVSD---TAELSMEEQFERLDTIAALEEERATIMQRLEARIEAKIGNIKSELLELVDEDFKEKRAKIDQEFAAKAXXXXXXXXXXXXXXXXXXXXXXXETKTGAA---------EVPTVPGSSV----APTEERPTAAAGIKMEEQ 1410
M P RRL AL CACS VA+GFVP G V SR+ G GCTSII + A + SFAGAPV+ GRP AG+RR GRRG + RRS TVQMVGFDNTFFGVGGPEV V+LVVGYFVLGPVELVKLVKQAGVL GQL+D+GLGTVNNL+TIVDDQI NAEQIASGEKKPPDY+APEEEFPMSDEDEFE+VTIDEYGRMVY+GQPEKPPPI++EDRAPFWEGLG+KISDK NEF++ EGPLKEASKFAQQLSGAVNEKVMG++R+ P D T ++GA A WE AEA AAGVG++ W+PPT+ELGME ELANDVPS+LDA S T+EL+++EQFERLDTIAALEEERA+ MQRLEA+IEAKIGNIK+ELLELVDEDF+EKR KIDQ+FAA+A XXXXXXXXXXXXXXXXXX +A T P ++ A ER TAAAGIKMEE+
Sbjct: 38 MAPNRRLGVALACACSAGVALGFVPNVGNAAVRSRRGGVEGGCTSIIGIGGASQYGSFAGAPVLQGRPAAGQRRVGRRGRHGRRS-TVQMVGFDNTFFGVGGPEVVVVLVVGYFVLGPVELVKLVKQAGVLVGQLRDVGLGTVNNLTTIVDDQIQNAEQIASGEKKPPDYFAPEEEFPMSDEDEFEDVTIDEYGRMVYEGQPEKPPPIKDEDRAPFWEGLGDKISDKLNEFDKEEGPLKEASKFAQQLSGAVNEKVMGIDRAAAPTDSSTSDVGAGAAWEGPAEAVAGXXXXXAAGVGMANGWKPPTSELGMEETVELANDVPSELDAPSGSSATSELTIDEQFERLDTIAALEEERASTMQRLEAKIEAKIGNIKNELLELVDEDFQEKRTKIDQQFAARAETKAAXXXXXXXXXXXXXXXXXXXXXVESAGXXXXXXXXXAETTPATAAPSPNATPPERSTAAAGIKMEEK 509
BLAST of mRNA_P-fluviatile_contig22.4734.1 vs. uniprot
Match: A0A835Z5Z6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Z6_9STRA) HSP 1 Score: 142 bits (357), Expect = 3.490e-34 Identity = 105/298 (35.23%), Postives = 147/298 (49.33%), Query Frame = 1
Query: 331 TFFGVGGPEVAVILVVGYFVLGPVELVKLVKQAGVLFGQLKDLGLGTVNNLSTIVDDQIMNAEQIASGEKKPPDYYAPEEEFPMSDEDEFEEVTIDEYGRMVYDGQPEKPPPIREEDRAPFWEGLGEKISDKFNEFEQ----GEGPLKEASKFAQQLSGAVNEKVMGMERSGGPADGTPNMGAEALWESAEAAGTATAGVAAGVGVSKEWQPPTTELGMEGAPELANDVPSKLDAVSDTAELSMEEQFERLDTIAALEEERATIMQRLEARIEAKIGNIKSELLELVDEDFKEKRAKI 1212
+FFG+G PE AV+L VGYFVLGP EL KL K G L GQ +D GLGT NL I++ ++ E A+G + E+ P D+DE+E++ + A + G + D++ + + E +KFA Q+SG N++V+ E A VA G GV+ LANDVP L A + EL+++EQFERL+ +AALEEERA +MQRL+ EAK+ ++ ELLELVD DF+ +RAK+
Sbjct: 10 SFFGIGAPEAAVVLAVGYFVLGPTELYKLTKSIGTLVGQFRDFGLGTATNLQNIMEKELRTVEDKAAGRSTLDREWGNLEDAPAGDDDEYEDIXXXXXXXXXXXXXXXXXXXVSAPKPAKDFFGGADGGGDEYEDLDVEEFLAETSASNNNKFAAQMSGDWNKQVLEQE----------------------------AAVAPGGGVAG----------------LANDVPQSLQAGGEPRELTIDEQFERLEKLAALEEERAALMQRLDDAFEAKMRAVRGELLELVDSDFRARRAKL 263
BLAST of mRNA_P-fluviatile_contig22.4734.1 vs. uniprot
Match: A0A7R9ZB23_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZB23_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 2.500e-6 Identity = 28/64 (43.75%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 316 VGFDNTFFGVGGPEVAVILVVGYFVLGPVELVKLVKQAGVLFGQLKDLGLGTVNNLSTIVDDQI 507
+G D+ GVG PEVAVI++VGYF+LGP +L KLVK+ G ++ LG+ + ++DQ+
Sbjct: 36 LGQDSGILGVGAPEVAVIVLVGYFILGPTDLYKLVKEIGKFIQNIRTLGVEASKSFENTMEDQL 99
BLAST of mRNA_P-fluviatile_contig22.4734.1 vs. uniprot
Match: A0A7S0T9M5_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T9M5_9RHOD) HSP 1 Score: 58.5 bits (140), Expect = 5.390e-6 Identity = 30/62 (48.39%), Postives = 41/62 (66.13%), Query Frame = 1
Query: 334 FFGVGGPEVAVILVVGYFVLGPVELVKLVKQAGVLFGQLKDLGLGTVNNLSTIVDDQIMNAE 519
F GVG EVAVILVVG+ VLGP EL+KL ++ G +FG L+ + N+L +IV+ + E
Sbjct: 53 FLGVGSMEVAVILVVGWVVLGPKELIKLTREVGKIFGSLRGIATNARNSLQSIVEADSLTEE 114
BLAST of mRNA_P-fluviatile_contig22.4734.1 vs. uniprot
Match: A0A7S1CRH9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CRH9_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 8.300e-6 Identity = 29/70 (41.43%), Postives = 41/70 (58.57%), Query Frame = 1
Query: 298 SNTVQMVGFDNTFFGVGGPEVAVILVVGYFVLGPVELVKLVKQAGVLFGQLKDLGLGTVNNLSTIVDDQI 507
S ++ ++G D GVG PE+A ILVVGYFVLGP EL KLVK+ G + L + +++Q+
Sbjct: 19 STSLNVLGGDGGILGVGAPEIATILVVGYFVLGPSELYKLVKEIGKFVQNFRSLSTEASKQFESTMENQL 88
BLAST of mRNA_P-fluviatile_contig22.4734.1 vs. uniprot
Match: A0A7S2S1E5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S1E5_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.690e-5 Identity = 31/77 (40.26%), Postives = 43/77 (55.84%), Query Frame = 1
Query: 286 NCRRSNTVQMV---GFDNTFFGVGGPEVAVILVVGYFVLGPVELVKLVKQAGVLFGQLKDLGLGTVNNLSTIVDDQI 507
+C++ T MV G FGVG PE+ V+L+VGYFVLGP EL LVK+ G ++ LG ++DQ+
Sbjct: 86 SCQKKKTSGMVMNLGGAEGIFGVGAPELVVVLIVGYFVLGPTELYSLVKEIGKFVQNIRSLGTDAAKTFEDSMEDQL 162
BLAST of mRNA_P-fluviatile_contig22.4734.1 vs. uniprot
Match: A0A7S1ZCG3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZCG3_TRICV) HSP 1 Score: 53.5 bits (127), Expect = 4.200e-5 Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 250 TAGKRRDGRRGGNCRRSNTVQMVGFDNTFFGVGGPEVAVILVVGYFVLGPVELVKLVKQAGVLFGQLKDLG 462
++ K + G RGG+ + +G D GVG PE+AVI++VGYF+LGP EL KL K+ G + LG
Sbjct: 44 SSAKPKGGGRGGS---TELKAFLGNDGGILGVGAPEIAVIVLVGYFILGPTELYKLTKEIGKTIQNFRSLG 111
BLAST of mRNA_P-fluviatile_contig22.4734.1 vs. uniprot
Match: B7FXN1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXN1_PHATC) HSP 1 Score: 57.4 bits (137), Expect = 5.210e-5 Identity = 38/112 (33.93%), Postives = 56/112 (50.00%), Query Frame = 1
Query: 205 HHRSFAGAPVVHGRPTAGKR-----RDGRRGGNCRRSNTVQMVGFDNTFFGVGGPEVAVILVVGYFVLGPVELVKLVKQAGVLFGQLKDLGLGTVNNLSTIVDDQIMNAEQI 525
H R G P + PT + + G G+ ++ +G D G+GGPE+ IL+VGYFVLGP +L KLVK+ G ++ LG +LST + + N Q+
Sbjct: 34 HSRCRLGRPAANPYPTPTTQGIVDLQHGNPRGSASSTSLNMFMGSDGGLLGIGGPELFTILLVGYFVLGPSDLYKLVKEIGKFIQNIRSLG----TDLSTTFESNMENQLQL 141
BLAST of mRNA_P-fluviatile_contig22.4734.1 vs. uniprot
Match: K0R3M1_THAOC (Sulfotransfer_1 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R3M1_THAOC) HSP 1 Score: 57.4 bits (137), Expect = 7.690e-5 Identity = 35/81 (43.21%), Postives = 47/81 (58.02%), Query Frame = 1
Query: 274 RRGGN--CRRSNT-VQMVGFDNTFFGVGGPEVAVILVVGYFVLGPVELVKLVKQAGVLFGQLKDLGLGTVNNLSTIVDDQI 507
RR GN R+S T + +G D GVG PEVAV L+VGYFVLGP +L KLVK+ G + LG + +++Q+
Sbjct: 61 RRTGNRQARQSTTSLNFMGSDGGILGVGAPEVAVTLLVGYFVLGPSDLYKLVKEIGKFVQNFRTLGTEAAKSFEGTMENQL 141
BLAST of mRNA_P-fluviatile_contig22.4734.1 vs. uniprot
Match: A0A7S2M850_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M850_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 9.300e-5 Identity = 29/70 (41.43%), Postives = 41/70 (58.57%), Query Frame = 1
Query: 298 SNTVQMVGFDNTFFGVGGPEVAVILVVGYFVLGPVELVKLVKQAGVLFGQLKDLGLGTVNNLSTIVDDQI 507
S ++ ++G D GVG PE+A ILVVGYFVLGP EL KLVK+ G + L + +++Q+
Sbjct: 76 STSLNVLGGDGGILGVGAPEIATILVVGYFVLGPSELYKLVKEIGKFVQNFRSLSTEASKQFESTMENQL 145 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig22.4734.1 >prot_P-fluviatile_contig22.4734.1 ID=prot_P-fluviatile_contig22.4734.1|Name=mRNA_P-fluviatile_contig22.4734.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=453bp MMPARRLRAALMCACSVSVAVGFVPGAGTGCVGSRQRGDGCTSIIPVNAHback to top mRNA from alignment at P-fluviatile_contig22:337817..343007+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig22.4734.1 ID=mRNA_P-fluviatile_contig22.4734.1|Name=mRNA_P-fluviatile_contig22.4734.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5191bp|location=Sequence derived from alignment at P-fluviatile_contig22:337817..343007+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig22:337817..343007+ >mRNA_P-fluviatile_contig22.4734.1 ID=mRNA_P-fluviatile_contig22.4734.1|Name=mRNA_P-fluviatile_contig22.4734.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2718bp|location=Sequence derived from alignment at P-fluviatile_contig22:337817..343007+ (Porterinema fluviatile SAG_2381)back to top |