mRNA_P-fluviatile_contig21.4674.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig21.4674.1
Unique NamemRNA_P-fluviatile_contig21.4674.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig21.4674.1 vs. uniprot
Match: A0A6H5KVH9_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVH9_9PHAE)

HSP 1 Score: 331 bits (849), Expect = 1.270e-106
Identity = 175/239 (73.22%), Postives = 201/239 (84.10%), Query Frame = 3 
Query:  480 MATGDVKYWDTSYAKTLDALDGYIVTAESASGDERDNALADATKSLKRLAGMRRSYNLEIKLLKDPASKAHYNMEKSQKDGRLTALQARFDLAQQAGGQSKRDALFGGQRDVERGVMREPSAEAKLDMADQYQDKTEEAYKNMIGVLQETEATADGTAVELTNQREQLNRITEDAIQIESMLTRADRLVKVFSKRMMTDKFIQCFGCLNVTFLVAIIVYVVLKKADLGGNSNTSPPDPS 1196
            MA+GDVKYWDTSY KTLD LDG+I T ES SGD R++A+++A++SLKRLAGMRRSYNLEIKL+KDP  KAHYN+EKSQKD R   LQ+RFD A+ A G S RD LFGG+RDVE G  +  SAEAKL  ADQYQDKTE AYKNMIGVLQETEATAD TAVELTNQREQL RITED  +I+S+LTRADRLVKVFSKRMMTDKFIQCFGCLNV+ +VAIIVYVV+++ +L G  +   PDP+
Sbjct:    1 MASGDVKYWDTSYGKTLDQLDGFIATMESGSGDAREDAMSEASRSLKRLAGMRRSYNLEIKLIKDPNMKAHYNLEKSQKDSRYATLQSRFDAAK-ASGDSTRDELFGGRRDVESGEAQGKSAEAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKFIQCFGCLNVSAMVAIIVYVVVQQVELPGGDDNDVPDPA 238
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BLAST of mRNA_P-fluviatile_contig21.4674.1 vs. uniprot
Match: A0A835Z1V1_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V1_9STRA)

HSP 1 Score: 197 bits (501), Expect = 3.050e-55
Identity = 110/228 (48.25%), Postives = 153/228 (67.11%), Query Frame = 3 
Query:  489 GDVKYWDTSYAKTLDALDGYIVTAESASGDERDNALADATKSLKRLAGMRRSYNLEIKLLKDPASKAHYNMEKSQKDGRLTALQARFDLAQQAGGQSKRDALFGGQRDVERGVMREPSAEAKLDMADQYQDKTEEAYKNMIGVLQETEATADGTAVELTNQREQLNRITEDAIQIESMLTRADRLVKVFSKRMMTDKFIQCFGCLNVTFLVAIIVYVVLKKADLGGNS 1172
            GDVKYWDTSY K LD L   +   + AS  E++  +A AT++++RL GM+RSYNLEIKL++D   KA Y  EK+ KD +LT L+A+ + A+     S + +LF G+   E  V    +A+ KLD A+  Q+KTE  YKN+I VL++TE     TA  L  QR Q++ ITE+ ++++ MLTRA++L+ VFS+R+ TDK IQCF  +NV  LVAIIVYVV+K   L G+S
Sbjct:    2 GDVKYWDTSYGKALDELSDQVKAVKGASAAEKEAKIATATQTVRRLQGMKRSYNLEIKLMRDATQKASYQEEKNAKDAKLTELEAQLEEAKNKPAGSDKVSLFSGRAAEEPKVK---TADQKLDQAEIIQNKTEAKYKNIITVLEQTEEVGSATAATLQEQRAQISEITENVMEMDGMLTRANKLIMVFSRRLATDKMIQCFAFINVAALVAIIVYVVIKNVGLPGSS 226
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BLAST of mRNA_P-fluviatile_contig21.4674.1 vs. uniprot
Match: A0A835Z325_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z325_9STRA)

HSP 1 Score: 172 bits (437), Expect = 4.380e-46
Identity = 102/235 (43.40%), Postives = 144/235 (61.28%), Query Frame = 3 
Query:  489 GDVKYWDTSYAKTLDALDGYI-VTAESASGDERDNALADATKSLKRLAGMRRSYNLEIKLLKDPASKAHYNMEKSQKDGRLTALQARFDLAQQAGG-QSKRDALFGGQRDVERGVMREPSAEAKLDMADQYQDKTEEAYKNMIGVLQETEATADGTAVELTNQREQLNRITEDAIQIESMLTRADRLVKVFSKRMMTDKFIQCFGCLNVTFLVAIIVYVVLKKADLGGNSNTSPP 1187
            GD+++WD +Y   LD L+  +    E+ +  +RD   + A  +++RL G++RSYNLEIKL +D   KA Y   K+ KD RL  L+A+ + A++  G +++R ALF G     R +   P+A+AKLD A   QDKTE  YKNM+ VL +TE      A  L +QR Q+  I ED   +   LTRA +L+ VF KR+ TDKFIQCFG +NV  LV II+YVV+ K  L  +  ++PP
Sbjct:    2 GDLQFWDGNYGNVLDGLESQLHQVREAYTPSDRDQLASTAASTVRRLQGIKRSYNLEIKLTRDTGLKAMYTDAKAAKDARLEQLEAQLEEARRKPGREAERAALFDG-----RAIEMAPAADAKLDQASAIQDKTEARYKNMVTVLAQTEEIGTAAAASLADQRTQMVAIDEDVKVMHENLTRAGKLLHVFGKRLATDKFIQCFGFVNVALLVGIILYVVITKTGLSSSGASNPP 231
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BLAST of mRNA_P-fluviatile_contig21.4674.1 vs. uniprot
Match: B8BZJ7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZJ7_THAPS)

HSP 1 Score: 114 bits (286), Expect = 3.190e-25
Identity = 70/217 (32.26%), Postives = 112/217 (51.61%), Query Frame = 3 
Query:  579 ERDNALADATKSLKRLAGMRRSYNLEIKLLKDPASKAHYNMEKSQKDGRLTALQARFDLAQQAGGQSKRDALFGGQRDVERG------VMREPSAEAKLDMADQYQDKTEEAYKNMIGVLQETEATADGTAVELTNQREQLNRITEDAIQIESMLTRADRLVKVFSKRMMTDKFIQCFGCLNVTFLVAIIVYVVLKKADLGGNSNTSPPDPSTA*RL 1211
            ++ + L  A K L+   G ++SY +E +L+ DP  K  Y  + S+    L++     DL    GG  + +   G +    RG      +  E + ++ L   +  QDKT+ +  N   ++  ++   + T  EL  QREQ+  +  +A++IE  L RAD+L+K F KRM TD+FIQCF C+N+  LV +++Y +LKK  L G  N   P      RL
Sbjct:    2 DKASTLDRAEKKLRAANGTKKSYKMETRLVADPNQKRMYENKLSRLSEELSSCAN--DLKAMKGGMQRGELFVGARGKSSRGGGEYGEMSGEEAGDSMLSDMNNIQDKTKNSLANTKHMVAASKEVGEATMEELLRQREQIRNVDNEAMRIEDNLQRADKLIKTFGKRMATDRFIQCFACINILLLVGVVIYTILKKGSLTGGENEGAPASPVGGRL 216
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BLAST of mRNA_P-fluviatile_contig21.4674.1 vs. uniprot
Match: A0A7S4A3K9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3K9_9STRA)

HSP 1 Score: 110 bits (275), Expect = 4.910e-23
Identity = 78/246 (31.71%), Postives = 125/246 (50.81%), Query Frame = 3 
Query:  492 DVKYWDTSYAKTLDALDGYIVTAESASGDERDNALADATKSLKRLAGMRRSYNLEIKLLKDPASKAHYNMEKSQKDGRLTALQARFDLAQQAGGQSKRDALFGGQRDVERGVMREPSAEAKLDMADQYQDKTEEAYKNMIGVLQETEATADGTAVELTNQREQLNRITEDAIQIESMLTRADRLVKVFSKRMMTDKFIQCFGCLNVTFLVAIIVYVVLKKADLGGNSNTSP---PDPSTA*RLWVR 1220
            D+ YW  SY  ++D  D  + +  +   DER + +  A   LKR  G+++SY LE++LL+D   K +Y     + D R   L+ R +  ++   +++R  L    ++           +  LD A   QDKTE   +    +++ ++     T  EL  Q++Q+  ++ D + IE  L+RADRL++ F+KRMMTDK I  F  LN+  L  IIVY V+    LG +        PD S   RL++R
Sbjct:   62 DIDYWSDSYRSSIDDADRLVTSLGACEPDERLSIIDAADAKLKRAGGIKKSYKLELRLLRDRELKRNYEESLRELDDRRDELKRRVEEHRE---RTERSTLL---QETPAAFGEHKGNDYYLDKAHSLQDKTENTLERTTQMIEASKEVGASTLSELERQQDQIKDVSADIMLIEDNLSRADRLIRNFTKRMMTDKLIMGFAFLNMCALTGIIVYCVVTGKVLGDDKKKDKEEGPDESER-RLFLR 300
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BLAST of mRNA_P-fluviatile_contig21.4674.1 vs. uniprot
Match: A0A7S2V573_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V573_9STRA)

HSP 1 Score: 108 bits (270), Expect = 5.060e-23
Identity = 78/245 (31.84%), Postives = 127/245 (51.84%), Query Frame = 3 
Query:  495 VKYWDTSYAKTLDALDGYIVTAESASGDERD--NALADATKSLKRLAGMRRSYNLEIKLLKDPASKAHYNMEKSQKDGRLTALQARFDLAQQA--------GGQSKRDALFGGQRDVERGVMREPSAEAKLDMADQYQDKTEEAYKNMIGVLQETEATADGTAVELTNQREQLNRITEDAIQIESMLTRADRLVKVFSKRMMTDKFIQCFGCLNVTFLVAIIVYVVLKKADLGGNSNTSPPDPST 1199
            ++YWD      +D  +     AE    D      A  +    L+   G+++S+  E++LL D   + HY M+  + + R++AL  R + +++A        G Q +R     G  D       +P+ +A L  A++ QD  E+AY      L E    A  T  EL NQRE++  ITE A +I+ +LTRADRL++ F +RM TD+ IQ F  +N   L+A+I+Y ++  ++L G S +  PDP++
Sbjct:    1 MEYWDERINSLIDQGER---EAEKLDMDNETAMEACQEIEHCLQSAKGVKQSFTTELRLLGDKVEEQHYKMKLRRYEERMSALTERLNGSREAIEKEHLMRGAQQRRGGGGFGDSD-------DPN-DAMLGKAEKLQDDIEDAYGRAENDLDEIRQLAPETLAELRNQREKIQDITETAERIDDLLTRADRLLRTFGRRMATDRLIQVFFFINACLLLAVIIYAIVSDSNLTGGSGSKAPDPNS 234
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BLAST of mRNA_P-fluviatile_contig21.4674.1 vs. uniprot
Match: W7TW41_9STRA (Soluble nsf attachment protein receptor n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW41_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.490e-22
Identity = 72/238 (30.25%), Postives = 130/238 (54.62%), Query Frame = 3 
Query:  492 DVKYWDTSYAKTLDALDGYIVTAESASGDERDNALADATKSLKRLAGMRRSYNLEIKL-LKDPASKAHYNMEKSQKDGRLTALQARFDLAQQAGGQSKRDALFGGQRDVE-RGVMREPSA-EAKLDMADQYQDKTEEAYKNMIGVLQETEATADGTAVELTNQREQLNRITEDAIQIESMLTRADRLVKVFSKRMMTDKFIQCFGCLNVTFLVAIIVYVVLKKADLGGNSNTSPPDPS 1196
            D++YWD   +  L  L+  I   +S  G +++  +A +  +LKR+  +++ YN E+++ LK+   +  Y  +    D R+ AL+     A+    ++ + +LF G +  +  G + E +  +  L  A + QDKTE + ++ +G+++ ++     T  E+  Q+EQ+  IT+    +E  LTRAD+L++ F +R+ TDKFIQ F  LN   LV IIV+  +KK  +      +PP P+
Sbjct:    3 DIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKT---EANKKSLFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVRAPEIHAPPMPT 237
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BLAST of mRNA_P-fluviatile_contig21.4674.1 vs. uniprot
Match: A0A7S1FMQ8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMQ8_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 7.370e-20
Identity = 68/227 (29.96%), Postives = 116/227 (51.10%), Query Frame = 3 
Query:  489 GDVKYWDTSYAKTLDALDGYI--VTAESASGDER-DNALADATKSLKRLAGMRRSYNLEIKLLKD-PASKAHYNMEKSQKDGRLTALQARFDLAQQAGGQSKRDALFGGQRDVERGVMREPSAEAKLDMADQYQDKTEEAYKNMIGVLQETEATADGTAVELTNQREQLNRITEDAIQIESMLTRADRLVKVFSKRMMTDKFIQCFGCLNVTFLVAIIVYVVLKKAD 1157
            GD++YW  S+   L  L   I  +      G     +A+ +A   LK+ + +++SY LE++L+   P  K  Y  +  + +  L     + D A+    +++R  L  G  +   G   E   +  L  A + QDKT+E+      ++ E++     T  EL  QR Q+ R+T+D + IE  L RA++L+K F +RM TDKFIQCF C+N+  L+ ++ ++   + D
Sbjct:    2 GDIEYWRDSFQSELSTLPEIIRDIDRVRKKGPYAIQSAIRNAEDQLKKCSNIQKSYKLELRLMVGMPVEKKKYENDLQELENELRECNDKLDDAK---ARAQRSELMSGANNE--GPDPERDGDQMLMEAGKIQDKTKESLMTTQNLIHESKEVGVTTLEELNRQRNQIVRVTDDVMAIEGELARAEKLIKTFGRRMATDKFIQCFTCVNILLLLGVVCFIFFVQED 223
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BLAST of mRNA_P-fluviatile_contig21.4674.1 vs. uniprot
Match: A0A7S2P5B9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P5B9_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 5.020e-19
Identity = 67/230 (29.13%), Postives = 119/230 (51.74%), Query Frame = 3 
Query:  492 DVKYWDTSYAKTLDALDGYIVTAESASGDERDNALADATKSLKRLAGMRRSYNLEIKLLKDPASKAHYNMEKSQKDGRLTALQARFDLAQQAGGQSKRDALFGGQRDVERGVMREPSAEAKLDMADQYQDKTEEAYKNMIGVLQETEATADGTAVELTNQREQLNRITEDAIQIESMLTRADRLVKVFSKRMMTDKFIQCFGCLNVTFLVAIIVYVVLK-KADLGGNSNT 1178
            D++YW+ +  + ++ L   +    + +G ++     +A K L+   G +RSY LE++++K+   +  Y  EK  KD   T L+A  D  +     + +D L  G    + G   E   +A ++ A   QDKT+ +      ++ E++     T   L  QR Q+ RI   A +    L RAD L+K FSKRM  DKFIQC  C+N++  + +I++++ K ++D  G+ ++
Sbjct:    3 DIEYWEETLKEEIEDLSTVLGLVVAQTGSKQKQKFDEADKKLRDANGTKRSYKLEMRVIKNATQRKMY--EKQLKDHE-TKLKALADHLKNLKSSATKDTLLEG---ADTGRTPEQEGDAMMNEARNTQDKTQTSLDRTKQLVAESKDIGQNTLATLEEQRAQIERIDAHADRTMENLGRADLLIKNFSKRMANDKFIQCCACINISLFIGVILFLIFKNRSDDDGDDSS 226
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BLAST of mRNA_P-fluviatile_contig21.4674.1 vs. uniprot
Match: F0YJK0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJK0_AURAN)

HSP 1 Score: 95.9 bits (237), Expect = 3.000e-18
Identity = 72/219 (32.88%), Postives = 108/219 (49.32%), Query Frame = 3 
Query:  528 LDALDGYIVTAESASGDERDNALADATKSLKRLAGMRRSYNLEIKLLKDPASKAHYNMEKSQKDGRLTALQARFDLAQQAGGQSKRDALFGGQRDVERGVMREPSAEAK-------LDMADQYQDKTEEAYKNMIGVLQETEATADGTAVELTNQREQLNRITEDAIQIESMLTRADRLVKVFSKRMMTDKFIQCFGCLNVTFLVAIIVYVVLKKADLG 1163
            +D L   ++      GDER   +++    L R   +RRSY LE++LL+D A K  Y  +    D R T ++   +  +   G S R  L G            P A +        LD A + QD+T++A    + +++ +         EL  Q+EQ   IT D + IE  LTRAD+L++ F+KRMMTDK I CF  +N+  L+ I+VY V+    LG
Sbjct:   60 VDELAAIVLLINGTVGDER---VSECDAKLCRAQSIRRSYCLEVRLLRDKAIKRTYEQKLKGLDTRCTEIRHDIECTR---GSSNRQELLGA-----------PPAHSDFKGNANYLDDAGKIQDQTQDALSRTMHLVEASSEVGHSALNELERQQEQARDITTDVMIIEDNLTRADKLIRNFTKRMMTDKLIVCFAFVNMCGLIGIVVYCVVTGRGLG 261
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig21.4674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5KVH9_9PHAE1.270e-10673.22t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835Z1V1_9STRA3.050e-5548.25Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A835Z325_9STRA4.380e-4643.40Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
B8BZJ7_THAPS3.190e-2532.26Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S4A3K9_9STRA4.910e-2331.71Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A7S2V573_9STRA5.060e-2331.84Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TW41_9STRA1.490e-2230.25Soluble nsf attachment protein receptor n=2 Tax=Mo... [more]
A0A7S1FMQ8_9STRA7.370e-2029.96Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2P5B9_9STRA5.020e-1929.13Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
F0YJK0_AURAN3.000e-1832.88Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig21contigP-fluviatile_contig21:2285735..2291991 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score119.4
Seed ortholog evalue2.3e-24
Seed eggNOG ortholog35128.Thaps4535
EggNOG OGs29I5R@1,2RRCR@2759,2XCW0@2836
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-20_002310.1
Exons6
Model size1944
Cds size726
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig21.4674.1prot_P-fluviatile_contig21.4674.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig21 2286214..2291252 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815952.7331603-UTR-P-fluviatile_contig21:2285734..22862131622815952.7331603-UTR-P-fluviatile_contig21:2285734..2286213Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 2285735..2286213 +
1693563842.9807444-UTR-P-fluviatile_contig21:2285734..22862131693563842.9807444-UTR-P-fluviatile_contig21:2285734..2286213Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 2285735..2286213 +
1622815952.8190577-UTR-P-fluviatile_contig21:2291252..22919911622815952.8190577-UTR-P-fluviatile_contig21:2291252..2291991Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 2291253..2291991 +
1693563843.0866523-UTR-P-fluviatile_contig21:2291252..22919911693563843.0866523-UTR-P-fluviatile_contig21:2291252..2291991Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 2291253..2291991 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815952.7462764-CDS-P-fluviatile_contig21:2286213..22862581622815952.7462764-CDS-P-fluviatile_contig21:2286213..2286258Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2286214..2286258 +
1693563842.9996834-CDS-P-fluviatile_contig21:2286213..22862581693563842.9996834-CDS-P-fluviatile_contig21:2286213..2286258Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2286214..2286258 +
1622815952.7580903-CDS-P-fluviatile_contig21:2287659..22878211622815952.7580903-CDS-P-fluviatile_contig21:2287659..2287821Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2287660..2287821 +
1693563843.0116243-CDS-P-fluviatile_contig21:2287659..22878211693563843.0116243-CDS-P-fluviatile_contig21:2287659..2287821Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2287660..2287821 +
1622815952.7700577-CDS-P-fluviatile_contig21:2288448..22885261622815952.7700577-CDS-P-fluviatile_contig21:2288448..2288526Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2288449..2288526 +
1693563843.0330122-CDS-P-fluviatile_contig21:2288448..22885261693563843.0330122-CDS-P-fluviatile_contig21:2288448..2288526Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2288449..2288526 +
1622815952.7810452-CDS-P-fluviatile_contig21:2289373..22895111622815952.7810452-CDS-P-fluviatile_contig21:2289373..2289511Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2289374..2289511 +
1693563843.0446584-CDS-P-fluviatile_contig21:2289373..22895111693563843.0446584-CDS-P-fluviatile_contig21:2289373..2289511Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2289374..2289511 +
1622815952.795426-CDS-P-fluviatile_contig21:2290389..22905661622815952.795426-CDS-P-fluviatile_contig21:2290389..2290566Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2290390..2290566 +
1693563843.065925-CDS-P-fluviatile_contig21:2290389..22905661693563843.065925-CDS-P-fluviatile_contig21:2290389..2290566Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2290390..2290566 +
1622815952.8088741-CDS-P-fluviatile_contig21:2291126..22912521622815952.8088741-CDS-P-fluviatile_contig21:2291126..2291252Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2291127..2291252 +
1693563843.0768147-CDS-P-fluviatile_contig21:2291126..22912521693563843.0768147-CDS-P-fluviatile_contig21:2291126..2291252Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2291127..2291252 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig21.4674.1

>prot_P-fluviatile_contig21.4674.1 ID=prot_P-fluviatile_contig21.4674.1|Name=mRNA_P-fluviatile_contig21.4674.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=242bp
MATGDVKYWDTSYAKTLDALDGYIVTAESASGDERDNALADATKSLKRLA
GMRRSYNLEIKLLKDPASKAHYNMEKSQKDGRLTALQARFDLAQQAGGQS
KRDALFGGQRDVERGVMREPSAEAKLDMADQYQDKTEEAYKNMIGVLQET
EATADGTAVELTNQREQLNRITEDAIQIESMLTRADRLVKVFSKRMMTDK
FIQCFGCLNVTFLVAIIVYVVLKKADLGGNSNTSPPDPSTA*
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mRNA from alignment at P-fluviatile_contig21:2285735..2291991+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig21.4674.1 ID=mRNA_P-fluviatile_contig21.4674.1|Name=mRNA_P-fluviatile_contig21.4674.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6257bp|location=Sequence derived from alignment at P-fluviatile_contig21:2285735..2291991+ (Porterinema fluviatile SAG_2381)
GACAGCCCAATCAGTTTATGTTCCGGCCGCGGGGTGACCGCTAACCTGCA
CTCTGCCCGATCCGGTTCGTCATTTGTGTTCTCTTTGCCGAGCAACGAAA
TCCGCACCCTCGGACGTGCGGCGTACTCTGTGGGACGGGGGACGTGTGTA
GTAGATCATTCGATGCCAAGTGTCCATTACCTGCGCACATTGCCTACTCC
CTCCCTCGCTCGCTCGCCTCGCCTTACGAGTTTGACTTCAGCTTGCCCTG
CGCCCGTGCTCGCGGGAGACCGTTCGCCGGTATTGCGGTCGTTTCAACCA
ACCCTACACGGGCCTTCTCCTTTTGTGCGATGTCTTTCCTCGTATGTTTT
TCCCATGGCGTGCGCTTTCGACAGCCGCCGCTTCTCCTATTGATAGCGCT
GGGTCCGTTACCGGTGGGAACCGCGCTGTTAGCTGCTGGGGCTGGGTGGG
GCCCGTCGCGTTAGATCCGGCGAGCAGCCATGGCTACCGGGGATGTCAAG
TACTGGGACACCAGCTACGCCAAGGTGTGTGGAGACGAGACGAACGAAAG
CGTTCATGCTGTAGTTTGTTGGGCGGAACGGTGGCCGCAGTACAAGCAAC
AATATCATAACGTTAGAAATGGAGAGTTTTGCTTTGGTGTTGCTGCGTTG
CTACCTGTCAAACAACGGAGGAAAACTTGTGTGAGCTGCGGCGTGATACC
CATCCGATGGTGTGTTTAACTTTGGAAGGGGAATAAACAGCCCACCCCGC
GAGGTACTTTCGCCATCGCCCCTCATGGTTAAGATCTGTCACGCTCTCAA
CATTGTCTTGTAGCGGGCCTCCGCTAAGAGCGCTACGCGACGGGGGTCCG
TGATTAACACTTGCCGCGACCTGCCCGTCATGGGGGGCAGACGCATTTTG
AGCCATGCCACCGCGAGGAGAGTTACATGCAGCAGATTTATGGTGTTCCA
ATTCGCAGCACCCCGGCGATACATGTCCTCTCGCCGCCGCGTTGTCGTCT
GTGTACGGTGAGGGTCGGGGTCTTGGCACGCCCACTCGCCCGATCCCAAA
GGCTCGCCGAACCTAGTTTAGTTGCCAGTGCCGAAGGTGATCTTGACACC
ATCAAAAGCGATCTTCAAGATGCGTTTGCTGCTGCTCTTACTTTCCTGCT
TGTGTAGCGAGCGAGTTTTCGGTCGGGAGGGCTTTCGCGAAGACCCTGAC
ACCTTCCGCTGTGTCGCCCGGAAGTATCTTCACCCACACACTTACAGAAT
AGCAGCTGTGTCGTGGAAAAACTATGTCGGTGGCACGGCTGTGGCGTTCC
TGCATTTCCCGCCTCTTCCAAGTTTTTCAAAGGTTCGACCTACTGAAGAA
AATTCCTCGCATCGATGTTGACACAACCCGCCCGATCGAACGATCGCCCT
TCCGCACTTCGCCCGTCGCGACGTAGACACGAAGAAGCACACCATCCTTG
AGATATTGAAAGCAACTCTATGTGAGCAAATTGCATCGATTGATCTTTTT
GCACAACTCGGGTAGAAAAGTCAAAGGTTTTCGATAGCGGAAGCAGGCGG
ACGACATTTCCGGGGCTTCCCGTTCGGAAGAAGACACTGGAAGCTGCAAT
GCTTCCATGTCTTGACGCTTATGGTAAATCACGGTTTGAATCTCGCTGAT
TTTGTATCACATGCGTGTTGCGCAAACTCTGTCTCGTGCATCACCCTGGG
ATCCCTGCGTTCGCACAGCCCTACGAAGTCTCCGAGGCAACGCTTGTTAT
TCCCTCCACTTTTCCCAAAAATCATGTGCATCGAGACACGCGGCTACCGA
TGTCGTAGCTCCGTCAGAGAATATCGTTTTGAAACGCGTCGTTCCATGAA
CGAATTTACTTGCCACCCGCCTCGCACGGACGAAACTCAACCGAAGTGAA
CCGACTTTTTTCTTTATCTCGGCAGACGCTGGACGCTCTGGACGGTTACA
TCGTCACAGCGGAGTCAGCGAGCGGAGACGAGCGGGACAATGCTCTAGCG
GACGCAACGAAGTCTTTGAAACGCCTGGCGGGCATGAGGAGGAGCTACAA
CCTCGAGATCAAACTGCTCAAAGATCCCGCCTCCAAGGTGTGCATATCCG
GGGTCGCCTCTGGCGGCTCAACCTTTCTCCTGTTGATGTGGTGGCGAACG
CCAAACCGGAAACATCATACATGATTGCAAATGATGGGAGTGATGATATG
ACTCGCAAAGAAAATGGATTTTTTTTTATCTTTCTGACTCGTACAATTGT
CGATTGACTCGCAAAGAAAATTGATTTTTTGATCTTTTTGACCCGTACAA
TTGTTCGCCCTTGCAAGATTTGTTGATAGAGGCAGATGAGGGGGAAATTT
CAACGTTGTGTTGTTAAAGAATTTGCCGAAGCAGCAGCCCGTCTGCGCTT
GATGTTGACGGTCGTTTTTAACTCCAGGAGTAGCTTTTCTGACTCTGGCG
ATGGAGGCCTCCAAAGTCTCAGGATTATTGCACTCCTTGCCACCGTTTTG
ACCCCGTGCTACCATCAGAGAATAGTCCCGCCTCATTTATTTACCTCGAT
CCGCACCGTCTTGGATACTTTCGCGAAAGCGAGTCATGCAACACATCCGC
CGCAGTTCCCGCCTAGGACAAGGTATGTAGGCCCGTTTCCGACTTGCGTC
AGGCACCGCCCTTCTCCTCCCCCCCTATTCCCGTCGCCCGAATCGACCTG
CGACCCGCCGGCAGGCGCACTACAACATGGAAAAGTCGCAGAAGGACGGC
CGCTTGACAGCGCTTCAGGCCAGATTCGACCTCGCCCAGCAGGTACCCTC
TTTGTCAGCTCCTGACGCTCTCCCCCGTGGTGAAGCGTTTTGAGGCGCCG
TGACGATTGGCGTGATGGATCGTGGGGGAGAAAGAGGAGCTAGATAGAGA
TCCCTCGAACAATGTAGTTGTAGTACGGCATTGCATCCCCTGCGGCAAGG
CCTTCCTGCGAGGAAGGGACACAGCGTGTGATGGCGGGAGGAGTCCTTCG
GCCGTTCTCTATGGCCTGCAAACACGCGCACGGCTACCCACGGAGAGGGG
CGAAGCACGATCACGTGTTGTGGGAACCGAATGTGCTGTGGCGGCTTCAG
CTAACATGAAATCCGCGTGTGTGAGGCCGCGCTCACATCGGCGACCGCGC
GTACACATGCACGCACGCATGCACACGTTGGCGGGCGGGCGGGAGGGCGG
GTGGGCCCCACCAGACGCCTGTTCGTCAACGCCAATGTGGCAACGAGGGT
TCCGTTCTCGACAGACGTTGGGGTTACCCCCACCCAGTATCCGCAGTACC
CCCCTTCTAATTTTTTTGGCAGGATCGAGAGGCCAAGCCAAGGTGCTATG
TCCCAAGACTTCGTCATCGGAGTGTTTTGGTCCATCGAGTAGCCGGGTAC
TGTGTAGGGCATGGTGTCCTGCAGTGTATATCGCGATACCGAATTGGCGA
CAGGCAGAAAGACGGATGGATGCGATCTCCCTATTTCCATCGCCATGCAC
TCCTCTCCCTACATGTCGGAATCGCTTGCGCGTTCGCTCGATGTTCCCCG
AAAAGAAATCAGCCGATCTTGTCCTTTTTTTTTTCGTTTCCGATCGCTCG
TGGTACCGACCCCTCTTCCCCTGCCTCCCACTCAATCAGGCGGGCGGGCA
GAGCAAGCGAGACGCGCTATTCGGTGGCCAGAGAGATGTCGAGCGCGGGG
TGATGCGGGAGCCATCCGCGGAGGCCAAGCTGGACATGGCCGACCAGTAC
CAGGATAAGACGGAGGAGGCGTACAAGGTGCGGAAGGAATTGCAACCCTC
GATAACAATTAAGGGCTCGCAAAGCAAGCGGCAAGCGCACGTCCCGCCGC
GCCTGTCGTCGTGCTGCCGCGAAGCGTGTGGAAGCTCTGGTGATTGGCTT
GGCACGTCGCGCTCCCACGCCTTTGTCGGGCCGGAGTCGTGGCTGTTCCG
CGTGTCCTCGTGTGTATGTGTGTGTTTGTTTCCTTTCTGACTTTTGTGAG
CTGTCTTGCTCGGTTTTACGAGTTGCCGTGTGTTGTGTCTGGTTGCGTGC
TGCGCGCCCGAGGTCTCGTGGTAGGTGGTACATGCGCGCAGCCGGTCTTA
GGCGCAGTCGCCTTTTCTCCGAGGAGTGTACAGCGCTCCAGATAATTTTT
TCAAGACCGTGCTTGTGTTTCCTCTCCTGTCACTGCGTGCAAACAGCAAG
GATTTCCGGCTCGCTCGAGCTGTATTTGTGTTTTTTGGTGCCGCCGGCAA
CACGCCAGCCTGACATTCGTGAGGTTCTATTTGGCTTGTGCTGAAGTGAC
GCATGTAACGAAGGGTTAGATTAAATACTTTCCTGTGCACAGGGGATTAT
TTGTTGAACTGTAAAATCACGGCGTGCTGCTTGAAGGTGGCGGTGAATTG
CGATGTTGTTGGGTACGTGCTCCACTGTTGATTGAAAGTGGCCGGCTACG
GACTTGACAATGGCATCAGATCTCGAGCTCAGTCCTAGTTTGAAGAAAGT
TGAGAGTCGTATCGCTCGAACACTTGCCGATACTTCTGACCAGAGCGGGA
GTTTTTGACCCTTCCCTTCCCGTCGCCGGTGTCTCTTTGCATTGTTGTCC
GTTGCCGTTGTAATGCGGCGCACCACTCTCGCACTCTCACGGAACGTAAT
CCCAGAACATGATCGGGGTGCTCCAGGAGACGGAAGCGACGGCCGACGGC
ACGGCGGTAGAGCTGACCAATCAGCGCGAGCAGCTCAACCGAATCACCGA
GGATGCAATCCAGATCGAATCCATGTTGACGAGGGCGGACCGGTTGGTGA
AGGTGTTCTCAAAGCGGATGATGACCGACAAGGTGAATGCTTAGGTTTTG
AGTCAGACCCGCCTGCGCCAAGCCTAATCAACGAGCGCATGCCCTCGTCC
CGGAAGTGTTGTGTGCCCACACCCTTCGACACGTCTCGTGGATCAGGCAC
CCTCGTCATGGGGCTGTGTGCCCACACCCTCCGACACGTCTTGTGGATCC
AGCACCCTCGTCATTATGCAGAGGCTCATTGGTTTTCGCGTGGAGATTCG
CGCCGAGCTGGTGGACGGCGAAGGCCTTTGCGTTGGCATTGCCGCCATCG
TCCGGATGCGGCCATGGAGCGGTGGGCTGCAACGAAGGGCTCAGGCCTTC
ATTGTGATTTCGGTTGCCGAGCATTTGCCCGAGCGCCACGACCAAGACGT
TGCTGTCGATCCTTTATCTCATTTATACTTTTATCTGAGCGCATCTCGGG
CTAGCGAAGATGTGACAACGGTGTACAACCGTGCCGCGCCCATCTAGCTC
TTAGCACCACTTACCATACATGCGTCTCCATTCTCTTATTACGTTCCCGC
CCCCGGTCTCTCCGCCTTTTATGTGCACGTCTTGTCTCTCAGTTTATCCA
GTGTTTCGGGTGCTTGAACGTCACGTTCTTGGTGGCGATCATCGTGTACG
TTGTGTTGAAGAAGGCAGACCTGGGCGGCAACAGCAACACCTCGCCACCG
GACCCGTCCACGGCGTGACGCCTGTGGGTCCGTGTTGTGGACTAGTCGAA
TCCGGGGCGGGGGGTGTGGGGGGCGGAATTGGACCGGGCACAGCGGCCTT
GCCATCGATCCTATCTTCGCCGCCCCCCACAGCCGTCGCGTACAGCCTTT
GTGTGACTGCGCGGGCAGGGAGGATCGGAATCGGCAGCAAAACTGTTGAA
AGCTCGAGTTAGGATGCTTTATTTCCGGAGCGCTCAACATCGGTGTGTGG
CTTTCCCACCCACGAGACGTTCGCGCCGTTTTTTTTGGGGGAGTGGAGAT
CGTTTCGCATTGCTTGTCGTTAGATAAGATTTCGTCGAATTCCCTGTTTT
GGTTTGACACACTTTGTATCATTGTTCCGTGCATCTTGCTCTGCTGCGCG
GGTGTTTGCCATGTTGTAGTCTACTCTGGTTTGTTCGGTGTTTTTTTCAC
TCCTCCTTGCGTGGATGTGGTAGATGGTGGCGTAAATCTCGAATGTGGTA
GCAGTTGGGAAAGTCGGCCTTCGTGGCGACAAAGTCGTGTAAATGTTAGG
CGAACATTCGACGTTCTTGTTTACCGCTGCATTTCGCTTGCGGATTCTGC
ATCGATGGATATCAAGTAAATTTTCCCCACCTGAAGTGAAAGGAATTGAA
CTCAATACGGTCTTGCGATTCTTTACGCTCGGATCGAGCTGCGAACGCGA
TGGAGGTTCTTTCTTTGGAGCGGCATTAAATACATCTCAAAAGACCGATA
TCACGAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig21:2285735..2291991+

>mRNA_P-fluviatile_contig21.4674.1 ID=mRNA_P-fluviatile_contig21.4674.1|Name=mRNA_P-fluviatile_contig21.4674.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1452bp|location=Sequence derived from alignment at P-fluviatile_contig21:2285735..2291991+ (Porterinema fluviatile SAG_2381)
ATGGCTACCGGGGATGTCAAGTACTGGGACACCAGCTACGCCAAGATGGC
TACCGGGGATGTCAAGTACTGGGACACCAGCTACGCCAAGACGCTGGACG
CTCTGGACGGTTACATCGTCACAGCGGAGTCAGCGAGCGGAGACGAGCGG
GACAATGCTCTAGCGGACGCAACGAAGTCTTTGAAACGCCTGGCGGGCAT
GAGGAGGAGCTACAACCTCGAGATCAAACTGCTCAAAGATCCCGCCTCCA
AGACGCTGGACGCTCTGGACGGTTACATCGTCACAGCGGAGTCAGCGAGC
GGAGACGAGCGGGACAATGCTCTAGCGGACGCAACGAAGTCTTTGAAACG
CCTGGCGGGCATGAGGAGGAGCTACAACCTCGAGATCAAACTGCTCAAAG
ATCCCGCCTCCAAGGCGCACTACAACATGGAAAAGTCGCAGAAGGACGGC
CGCTTGACAGCGCTTCAGGCCAGATTCGACCTCGCCCAGCAGGCGCACTA
CAACATGGAAAAGTCGCAGAAGGACGGCCGCTTGACAGCGCTTCAGGCCA
GATTCGACCTCGCCCAGCAGGCGGGCGGGCAGAGCAAGCGAGACGCGCTA
TTCGGTGGCCAGAGAGATGTCGAGCGCGGGGTGATGCGGGAGCCATCCGC
GGAGGCCAAGCTGGACATGGCCGACCAGTACCAGGATAAGACGGAGGAGG
CGTACAAGGCGGGCGGGCAGAGCAAGCGAGACGCGCTATTCGGTGGCCAG
AGAGATGTCGAGCGCGGGGTGATGCGGGAGCCATCCGCGGAGGCCAAGCT
GGACATGGCCGACCAGTACCAGGATAAGACGGAGGAGGCGTACAAGAACA
TGATCGGGGTGCTCCAGGAGACGGAAGCGACGGCCGACGGCACGGCGGTA
GAGCTGACCAATCAGCGCGAGCAGCTCAACCGAATCACCGAGGATGCAAT
CCAGATCGAATCCATGTTGACGAGGGCGGACCGGTTGGTGAAGGTGTTCT
CAAAGCGGATGATGACCGACAAGAACATGATCGGGGTGCTCCAGGAGACG
GAAGCGACGGCCGACGGCACGGCGGTAGAGCTGACCAATCAGCGCGAGCA
GCTCAACCGAATCACCGAGGATGCAATCCAGATCGAATCCATGTTGACGA
GGGCGGACCGGTTGGTGAAGGTGTTCTCAAAGCGGATGATGACCGACAAG
TTTATCCAGTGTTTCGGGTGCTTGAACGTCACGTTCTTGGTGGCGATCAT
CGTGTACGTTGTGTTGAAGAAGGCAGACCTGGGCGGCAACAGCAACACCT
CGCCACCGGACCCGTCCACGGCGTGATTTATCCAGTGTTTCGGGTGCTTG
AACGTCACGTTCTTGGTGGCGATCATCGTGTACGTTGTGTTGAAGAAGGC
AGACCTGGGCGGCAACAGCAACACCTCGCCACCGGACCCGTCCACGGCGT
GA
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