mRNA_P-fluviatile_contig21.4667.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig21.4667.1 vs. uniprot
Match: A0A6H5J6Q7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Q7_9PHAE) HSP 1 Score: 192 bits (489), Expect = 4.820e-47 Identity = 140/294 (47.62%), Postives = 183/294 (62.24%), Query Frame = 2
Query: 1436 VSPYVFHTHAARVFSDISAALRRAQEASADVVARLEASQMAKEHERHLRATEARRYVARLKELQELMKARAQREVEGALARKSLNRRLGEEISRSAQLEKRLADTRDELQRLRQDFESERCALEEKWRSTLDQAIVAAREEERSKANGKVEAFTIKRLRSLSSEVTELKRKLKSLQAENISLLEALGSRISPPPFPPTSC----LSR-----RRAKPTGSEMEEEEAVVSADGEASSCSGAD--PLLHSGTGLADVVSGLADR-------IKRATSEHFSGVGLQQQRVSSRQR 2263
VSPYVFHTHA RVFS+IS ALRRAQ+ASA+V+ARLEAS+ A+E +R +RA EAR YV+RL+ELQ LMKAR +RE+EG + LAD D+ +RLR+ F SE+ ALE+ WRSTLDQA+V+ARE ERSKA+ KVE +++LRSLS+EV LK KLK LQ EN + EAL +R P P L R RRAK S + A +A E SS A+ P + L++ +SG+++R ++++ SEH SG+G RVS R+R
Sbjct: 26 VSPYVFHTHAPRVFSEISEALRRAQDASAEVMARLEASETAQEEQRRMRAAEARGYVSRLRELQALMKARVEREIEGXXXXXXXXXXXXXXXXXXXXXXQGLADAEDKQRRLRRKFASEKKALEQWWRSTLDQAVVSAREAERSKASAKVEGAMVRKLRSLSTEVATLKGKLKLLQEENATYAEALRARTPRPSSGPLKVDGDRLPRSESFGRRAKSEISRLSASAAATAAMDERSSADSAENSPRSKVSSTLSEFISGISERGLDLAVRLRKSISEHASGLGFSP-RVSRRRR 318
BLAST of mRNA_P-fluviatile_contig21.4667.1 vs. uniprot
Match: D8LHR3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHR3_ECTSI) HSP 1 Score: 185 bits (469), Expect = 1.820e-44 Identity = 137/294 (46.60%), Postives = 178/294 (60.54%), Query Frame = 2
Query: 1436 VSPYVFHTHAARVFSDISAALRRAQEASADVVARLEASQMAKEHERHLRATEARRYVARLKELQELMKARAQREVEGALARKSLNRRLGEEISRSAQLEKRLADTRDELQRLRQDFESERCALEEKWRSTLDQAIVAAREEERSKANGKVEAFTIKRLRSLSSEVTELKRKLKSLQAENISLLEALGSRISP---PPFP------PTSCLSRRRAKPTGSEMEEEEAVVSADGEASSCSGAD--PLLHSGTGLADVVSGLADR-------IKRATSEHFSGVGLQQQRVSSRQR 2263
VSPYVFHTHA RVFS+IS ALRRAQ+ASA+V+ RLEAS+ A+E +R +RA EAR YV+RL+ELQ LMKAR +RE+E LAD D+ +RLR+ F SE+ ALE+ WRSTLDQA+V+ARE ERSKA+ KVE ++RLRSLS+EV LK KLK LQ EN + EAL +R P P P S RRAK S + A +A E S+ + P + L + +SG+++R ++++ SEH SG+G RVS R+R
Sbjct: 26 VSPYVFHTHAPRVFSEISEALRRAQDASAEVMTRLEASETAQEEQRRMRAAEARGYVSRLRELQALMKARVEREIEXXXXXXXXXXXXXXXXXXXXXXXXGLADAEDKQKRLRRKFASEKKALEQWWRSTLDQAVVSARETERSKASAKVEGAMVRRLRSLSTEVATLKGKLKLLQEENATYAEALHARTPPLSSGPLKDGRDRLPRSGSFGRRAKSEISRLSASAAAAAAMDERSTAGSEENSPRSKVSSTLTEFISGISERGLDLAVRLRKSISEHASGLGFSP-RVSRRRR 318 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig21.4667.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig21.4667.1 >prot_P-fluviatile_contig21.4667.1 ID=prot_P-fluviatile_contig21.4667.1|Name=mRNA_P-fluviatile_contig21.4667.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=550bp MMGWNGIGSDRIGSDGMGWNGTELDRTESDGRARTPCSVSPYVFHTHAARback to top mRNA from alignment at P-fluviatile_contig21:2215229..2221634- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig21.4667.1 ID=mRNA_P-fluviatile_contig21.4667.1|Name=mRNA_P-fluviatile_contig21.4667.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6406bp|location=Sequence derived from alignment at P-fluviatile_contig21:2215229..2221634- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig21:2215229..2221634- >mRNA_P-fluviatile_contig21.4667.1 ID=mRNA_P-fluviatile_contig21.4667.1|Name=mRNA_P-fluviatile_contig21.4667.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3300bp|location=Sequence derived from alignment at P-fluviatile_contig21:2215229..2221634- (Porterinema fluviatile SAG_2381)back to top |