mRNA_P-fluviatile_contig21.4635.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig21.4635.1 vs. uniprot
Match: D7G0I3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0I3_ECTSI) HSP 1 Score: 345 bits (884), Expect = 1.400e-112 Identity = 168/187 (89.84%), Postives = 178/187 (95.19%), Query Frame = 2
Query: 128 MASEYPDYHSIVSTPMDLGTIQENIRQGVYPSLEACAKDVRTVWTNAYLYNPATSVVAQGARALSKVFEGMYNKINPTDFNYAREPNVDERNKFSRDIYRVEDSQLAEAVGILEQRCPDAVVRDNEDGYFVLKVDALPSPVFWEVELFLRKCLYNQPDRTKKKIPTTFRPPPESLARLSGRKRGSDG 688
MASEYPDYH IVSTPMDLGTIQENIRQ VYPSLEACAKDVRTVWTNAYLYNPA SVVAQGARALSKVFEGMYNKINP DFNYAREPNVDERNK SRDIYRVEDSQL EAV +LEQRCP+AVVRD+E+GYFV+KV+ALPSPVFWEVEL+LRK L NQPDRTKKKIPTTFRPPP+S+ARLSGRKRG+DG
Sbjct: 1 MASEYPDYHQIVSTPMDLGTIQENIRQNVYPSLEACAKDVRTVWTNAYLYNPAKSVVAQGARALSKVFEGMYNKINPADFNYAREPNVDERNKLSRDIYRVEDSQLEEAVQLLEQRCPEAVVRDDEEGYFVVKVEALPSPVFWEVELYLRKRLCNQPDRTKKKIPTTFRPPPDSMARLSGRKRGNDG 187
BLAST of mRNA_P-fluviatile_contig21.4635.1 vs. uniprot
Match: A0A8J2WSU6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WSU6_9STRA) HSP 1 Score: 102 bits (253), Expect = 2.770e-21 Identity = 59/197 (29.95%), Postives = 102/197 (51.78%), Query Frame = 2
Query: 44 EAEEMRLMEQLIQKLSQRDLAAIFNQPV--MASEYPDYHSIVSTPMDLGTIQENIRQGVYPSLEACAKDVRTVWTNAYLYNPATSVVAQGARALSKVFEGMYNKI---NPT--DFNYAREPNVDERNKFSRDIYRVEDSQLAEAVGILEQRCPDAVVRDNEDGYFVLKVDALPSPVFWEVELFLRKCLYNQPDRTKK 613
+A+ M M ++I L QR + F +PV DY +++ PMDL T+++ I + Y S+ CA D+R +W N YN S A SK FE ++K+ NP + P+++E+ +FS +IYR++ +L V L+ +CPDA+ + D + +D + F +++ ++R+CL + KK
Sbjct: 3 QADGMAAMTKIINTLMQRPDSVPFREPVDWRGLGLYDYPQVIAKPMDLTTVKQTIERQGYKSVNDCADDIRLIWNNCKKYNQDGSDFYNLADGFSKRFEERFSKVKAENPALDEEELTHAPDLEEKTRFSHNIYRIKQEELGVLVEKLDAKCPDAIDKSTSDDEIEINIDQIDPRTFHDLDRYVRQCLSQSNPKKKK 199
BLAST of mRNA_P-fluviatile_contig21.4635.1 vs. uniprot
Match: UPI000B8CBDBA (transcription factor GTE12 isoform X1 n=2 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CBDBA) HSP 1 Score: 80.5 bits (197), Expect = 1.660e-12 Identity = 55/164 (33.54%), Postives = 83/164 (50.61%), Query Frame = 2
Query: 74 LIQKLSQRDLAAIFNQPV--MASEYPDYHSIVSTPMDLGTIQENIRQGVYPSLEACAKDVRTVWTNAYLYNPATSVVAQGARALSKVFEGMYNKINPTDFNYAREPNVDERNKFSRDIYRVEDS-----QLAEAVGILEQRCPDAVVRDNEDGYFVLKVDALPS 544
L+Q L + IFNQPV + + PDY S++S PMDLGTI+ N+ +Y LEA A DVR ++NA +YNP ++ V Q A+ L ++FE + + RN R I +S QL + + + + VR++E V +V+ LP
Sbjct: 108 LLQILMRHRFGWIFNQPVDPVKLKIPDYFSVISKPMDLGTIKSNLDNNIYLGLEAFAADVRLTFSNAMIYNPPSTDVHQMAKELLELFELRWKSVEEKGIG---------RNSGLRKIDETRESNPKTPQLCRSSVLKRPKRGEKAVRNSEASTVVSQVEGLPK 262
BLAST of mRNA_P-fluviatile_contig21.4635.1 vs. uniprot
Match: A0A6P6G8Z3_ZIZJJ (LOW QUALITY PROTEIN: transcription factor GTE9 n=3 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P6G8Z3_ZIZJJ) HSP 1 Score: 77.8 bits (190), Expect = 1.310e-11 Identity = 38/89 (42.70%), Postives = 59/89 (66.29%), Query Frame = 2
Query: 74 LIQKLSQRDLAAIFNQPV--MASEYPDYHSIVSTPMDLGTIQENIRQGVYPSLEACAKDVRTVWTNAYLYNPATSVVAQGARALSKVFE 334
+++KL D A +FNQPV + PDY S++S+PMDLGT++ + + +Y + A DVR ++NA LYNP ++VV Q A L+++FE
Sbjct: 68 ILKKLMSHDAAWVFNQPVDPVKLNIPDYFSVISSPMDLGTVKSKLEKNMYSRADEFADDVRLTFSNAMLYNPPSNVVHQMALNLNQIFE 156
BLAST of mRNA_P-fluviatile_contig21.4635.1 vs. uniprot
Match: A0A2P5EHJ9_TREOI (Bromodomain containing protein n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5EHJ9_TREOI) HSP 1 Score: 76.3 bits (186), Expect = 4.430e-11 Identity = 38/89 (42.70%), Postives = 59/89 (66.29%), Query Frame = 2
Query: 74 LIQKLSQRDLAAIFNQPV--MASEYPDYHSIVSTPMDLGTIQENIRQGVYPSLEACAKDVRTVWTNAYLYNPATSVVAQGARALSKVFE 334
++++L ++ +FNQPV +A PDY SI+S PMDLGTI+ + + VY +E A D+R ++NA LYNP ++ V A+ LS++FE
Sbjct: 76 VLRRLMTDEVGWVFNQPVDPVALNIPDYFSIISQPMDLGTIKSKLEKNVYSGIEEFASDIRLTFSNAMLYNPPSNGVHVMAKKLSQIFE 164
BLAST of mRNA_P-fluviatile_contig21.4635.1 vs. uniprot
Match: I1CF66_RHIO9 (Transcription initiation factor TFIID subunit 2 n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CF66_RHIO9) HSP 1 Score: 76.3 bits (186), Expect = 7.390e-11 Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = 2
Query: 41 MEAEEMRLMEQLIQKLSQRDLAAIFNQPVMASEYPDYHSIVSTPMDLGTIQENIRQGVYPSLEACAKDVRTVWTNAYLYNPATSVVAQGARALSKVFEGMYNKIN 355
++ EE R+ +++I L+ R+ AA+FN+PV S PDY I+ PMDL TI E + G Y SL+A +D+R V+ N + YN + + + L K Y+KIN
Sbjct: 1522 LKGEEKRIAQKVINNLTYRECAALFNEPVDLSALPDYAQIIKKPMDLRTIWERLESGKYTSLKAIDQDIRLVFKNCFTYNAVGTFGYEQGKQLEKY----YHKIN 1622
BLAST of mRNA_P-fluviatile_contig21.4635.1 vs. uniprot
Match: A0A7S2GTN7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GTN7_9EUKA) HSP 1 Score: 73.6 bits (179), Expect = 8.120e-11 Identity = 43/89 (48.31%), Postives = 51/89 (57.30%), Query Frame = 2
Query: 74 LIQKLSQRDLAAIFNQPVMAS--EYPDYHSIVSTPMDLGTIQENIRQGVYPSLEACAKDVRTVWTNAYLYNPATSVVAQGARALSKVFE 334
L+Q L Q A F QPV A + PDYH +++ PMDLGTI+ + Q Y S A DVR VW NA YNPA +VV A L VFE
Sbjct: 53 LLQLLKQEPNALYFLQPVDAEALKLPDYHQVITRPMDLGTIESKMEQRAYQSPGAFVDDVRLVWENARRYNPAGTVVHFAAVQLFTVFE 141
BLAST of mRNA_P-fluviatile_contig21.4635.1 vs. uniprot
Match: A0A6A6LVC7_HEVBR (Bromo domain-containing protein n=2 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6LVC7_HEVBR) HSP 1 Score: 74.7 bits (182), Expect = 1.370e-10 Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 2
Query: 110 IFNQPV--MASEYPDYHSIVSTPMDLGTIQENIRQGVYPSLEACAKDVRTVWTNAYLYNPATSVVAQGARALSKVFEGMYNKI 352
IF +PV +A + PDY SI+S PMDLGTI+ + + Y E A DVR ++NA LYNP T+ V Q A +L+K+FE + +
Sbjct: 108 IFREPVDPVALKIPDYFSIISNPMDLGTIKSKLEKNQYSGTEEFAADVRLTFSNAMLYNPPTNYVHQVAESLNKIFETKWKSL 190
BLAST of mRNA_P-fluviatile_contig21.4635.1 vs. uniprot
Match: UPI0008FEC0B8 (transcription factor GTE9 isoform X7 n=1 Tax=Vitis vinifera TaxID=29760 RepID=UPI0008FEC0B8) HSP 1 Score: 74.3 bits (181), Expect = 1.600e-10 Identity = 42/109 (38.53%), Postives = 63/109 (57.80%), Query Frame = 2
Query: 74 LIQKLSQRDLAAIFNQPV--MASEYPDYHSIVSTPMDLGTIQENIRQGVYPSLEACAKDVRTVWTNAYLYNPATSVVAQGARALSKVFEGMYNKINPTDFNYAREPNVD 394
+++KL +FNQPV +A PDY SI+S PMDLGTI+ + + +Y + E A DVR + NA LYNP ++ V Q A+ L+ +F + + D N++ VD
Sbjct: 84 ILKKLMTHPAGWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKLEKNMYLATEEFAADVRLTFANAMLYNPPSNNVHQMAKKLNDLFNTRWKTV---DTNWSESSKVD 189
BLAST of mRNA_P-fluviatile_contig21.4635.1 vs. uniprot
Match: A0A059LGJ2_9CHLO (Bromo domain-containing protein (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LGJ2_9CHLO) HSP 1 Score: 68.2 bits (165), Expect = 1.610e-10 Identity = 35/102 (34.31%), Postives = 59/102 (57.84%), Query Frame = 2
Query: 41 MEAEEMRLMEQLIQKLSQRDLA-AIFNQPVMASEYPDYHSIVSTPMDLGTIQENIRQGVYPSLEACAKDVRTVWTNAYLYNPATSVVAQGARALSKVFEGMY 343
M+A + ++Q++ ++ Q ++A A FN+PV YP+Y SIV TPMD GTI+ + Q YP++ D R +++N +N TS + R L F+ ++
Sbjct: 1 MDASVRQRIQQVLLRVCQHEVARAYFNEPVDLGMYPEYTSIVETPMDFGTIRRKLSQNAYPAVANVLHDARLIFSNCRAFNDPTSDIMADCRRLEAHFKSLW 102 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig21.4635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig21.4635.1 >prot_P-fluviatile_contig21.4635.1 ID=prot_P-fluviatile_contig21.4635.1|Name=mRNA_P-fluviatile_contig21.4635.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=377bp MEAEEMRLMEQLIQKLSQRDLAAIFNQPVMASEYPDYHSIVSTPMDLGTIback to top mRNA from alignment at P-fluviatile_contig21:1851177..1856192- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig21.4635.1 ID=mRNA_P-fluviatile_contig21.4635.1|Name=mRNA_P-fluviatile_contig21.4635.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5016bp|location=Sequence derived from alignment at P-fluviatile_contig21:1851177..1856192- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig21:1851177..1856192- >mRNA_P-fluviatile_contig21.4635.1 ID=mRNA_P-fluviatile_contig21.4635.1|Name=mRNA_P-fluviatile_contig21.4635.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2262bp|location=Sequence derived from alignment at P-fluviatile_contig21:1851177..1856192- (Porterinema fluviatile SAG_2381)back to top |