mRNA_P-fluviatile_contig21.4632.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig21.4632.1 vs. uniprot
Match: A0A6H5J902_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J902_9PHAE) HSP 1 Score: 188 bits (477), Expect = 4.970e-56 Identity = 93/142 (65.49%), Postives = 111/142 (78.17%), Query Frame = 1
Query: 355 CLTHDTPTSGGKVHAPPKTFDNEMISEDVEEMSGFINELTDAGVKTADLHKAL*QRSGKRLGNGGKAKVRTIIDRHKDLEDASFNDAQLCLTYLKTSGADMWFRADEKGRISSIAWAYGVQKATAVRCHSVIITDTTFNTNQ 780
CLTH TP+SGGK HA P+TFDNEM E + +MSGFI +L D G+KTADLHK + Q+SGKRLG GKA VR+I+DRH+ +FNDAQ L +L+ S A MWF+ADE+ RI+SIAWA VQKATAV HSVIITDTTFNTN+
Sbjct: 2 CLTHHTPSSGGKEHARPRTFDNEMTREGIAQMSGFIIDLADTGMKTADLHKTVQQKSGKRLGVEGKAVVRSIVDRHEKASREAFNDAQKFLQHLQHSKAHMWFKADEQARITSIAWASDVQKATAVNFHSVIITDTTFNTNR 143
BLAST of mRNA_P-fluviatile_contig21.4632.1 vs. uniprot
Match: A0A6H5JCQ6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCQ6_9PHAE) HSP 1 Score: 179 bits (453), Expect = 9.570e-51 Identity = 88/143 (61.54%), Postives = 110/143 (76.92%), Query Frame = 1
Query: 343 EGEKCLTHDTPTSGGKVHAPPKTFDNEMISEDVEEMSGFINELTDAGVKTADLHKAL*QRSGKRLGNGGKAKVRTIIDRHKDLEDASFNDAQLCLTYLKTSGADMWFRADEKGRISSIAWAYGVQKATAVRCHSVIITDTTFN 771
+G CLTH TP+S K HA P+TFDNEM ED+E+MS FI +L DAGVKT DLHK + Q+SGKRLG GKA VR++++RH+ +FNDAQ L +++ + A +WFRAD++ RI+SIAWA VQKATAVR HSVIITDTTFN
Sbjct: 126 QGGMCLTHHTPSSDEKEHARPRTFDNEMSREDMEQMSDFIIDLADAGVKTVDLHKTVQQKSGKRLGVEGKAVVRSVVERHRKASREAFNDAQEFLMHVQRTKAHLWFRADDEARITSIAWASDVQKATAVRFHSVIITDTTFN 268
BLAST of mRNA_P-fluviatile_contig21.4632.1 vs. uniprot
Match: A0A6H5JB23_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB23_9PHAE) HSP 1 Score: 187 bits (476), Expect = 3.250e-50 Identity = 93/147 (63.27%), Postives = 111/147 (75.51%), Query Frame = 1
Query: 343 EGEKCLTHDTPTSGGKVHAPPKTFDNEMISEDVEEMSGFINELTDAGVKTADLHKAL*QRSGKRLGNGGKAKVRTIIDRHKDLEDASFNDAQLCLTYLKTSGADMWFRADEKGRISSIAWAYGVQKATAVRCHSVIITDTTFNTNQW 783
EG CLTH TPTS GK HAPP TFDNEM +D+ EMS FI +L D+GVKT DLHK + Q+SGKRLG GKA VR I+++H + +FNDAQ L +L+ S A +WFRAD + RI+SIAWA VQKA AVR HSVIITDTTFNTN++
Sbjct: 119 EGGMCLTHHTPTSNGKEHAPPTTFDNEMSRQDIYEMSDFIIDLADSGVKTVDLHKTVQQKSGKRLGREGKALVRCIVEKHLEDSREAFNDAQEFLAHLQRSKAHLWFRADNQSRITSIAWASDVQKAAAVRFHSVIITDTTFNTNRY 265
BLAST of mRNA_P-fluviatile_contig21.4632.1 vs. uniprot
Match: A0A6H5JXK5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK5_9PHAE) HSP 1 Score: 127 bits (320), Expect = 8.020e-29 Identity = 69/150 (46.00%), Postives = 96/150 (64.00%), Query Frame = 1
Query: 343 EGEKCLTHDTPTSGGKVHAPPKTFDNEMISEDVEEMSGFINELTDAGVKTADLHKAL*QRSGKRLGNGGKAKVRTII---DRHKDLEDASFNDAQLCLTYLKTSGADMWFRADEKGRISSIAWAYGVQKATAVRCHSVIITDTTFNTNQW 783
+G+ CLTH T TSGGK H P+ +NEM ++E F+ EL + VKT ++HK L +R GKRLG GK KVRT++ D + E+ +FNDAQL + +L+ + A + F+ E GR++ IAWA QK A+R H +II D TFNTN +
Sbjct: 209 KGKLCLTHHTKTSGGKEHERPRAIENEMSVAEIEAKRDFLRELHASRVKTTEIHKTL-ERVGKRLGQAGKQKVRTMMAQFDAERQAENGAFNDAQLLVGHLQNTEAFLRFK-HEDGRMTCIAWASQDQKVLAMRYHKIIIQDNTFNTNVY 356
BLAST of mRNA_P-fluviatile_contig21.4632.1 vs. uniprot
Match: D7G3P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P9_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 4.300e-20 Identity = 65/145 (44.83%), Postives = 83/145 (57.24%), Query Frame = 1
Query: 355 CLTHDTPTSGGKVHAPPKTFDNEMISEDVEEMSGFINELTDAGVKTADLHKAL*QRSGKRLGNGGKAKVRTI---IDRHKDLEDAS-FNDAQLCLTYLKTSGADMWFRADEKGRISSIAWAYGVQKATAVRCHSVIITDTTFNTN 777
CL H G H+PP+ NEM E +E+ +G I L G+ +HKAL Q +G RLG GK KVR++ +D+ + LEDA NDA+ L L+ G M F DE GR+ IAWA Q+ A+R HSVII D TFNTN
Sbjct: 140 CLHHYVDP-GNIEHSPPQPGKNEMTDEGIEKRAGLIRLLHVQGLDAKAMHKAL-QDNGWRLGIEGKQKVRSVRARLDKQR-LEDAGGANDAEQLLERLQLEGCWMRFALDEAGRVKRIAWALVEQQKNALRYHSVIIQDNTFNTN 281
BLAST of mRNA_P-fluviatile_contig21.4632.1 vs. uniprot
Match: A0A6H5JG50_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG50_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 3.190e-18 Identity = 62/146 (42.47%), Postives = 80/146 (54.79%), Query Frame = 1
Query: 355 CLTHDTPTSG--GKVHAPPKTFDNEMISEDVEEMSGFINELTDAGVKTADLHKAL*QRSGKRLGNGGKAKVRTIIDRH-KDLEDAS--FNDAQLCLTYLKTSGADMWFRADEKGRISSIAWAYGVQKATAVRCHSVIITDTTFNTN 777
CL H SG G H PP+TF+NEM E++E+ + I G K +++ L Q KRLG GK KVRTII R+ K+ D NDAQ T L+ + F+ D+ GRI IAWA QK A+R + +II D TF TN
Sbjct: 7 CLHHYLRGSGASGGEHDPPRTFENEMTDEEIEQNTAKILSYDSNGAKNPTIYQQL-QTPTKRLGVKGKEKVRTIIKRYEKEQADKREHANDAQQLFTRLQQENVWVRFQLDKDGRIVRIAWALEEQKKNALRYYPIIIQDNTFGTN 151
BLAST of mRNA_P-fluviatile_contig21.4632.1 vs. uniprot
Match: A0A6H5JI64_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI64_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 6.270e-15 Identity = 57/143 (39.86%), Postives = 73/143 (51.05%), Query Frame = 1
Query: 355 CLTHDTPTSGG-KV-HAPPKTFDNEMISEDVEEMSGFINELTDAGVKTADLHKAL*QRSGKRLGNGGKAKVRTIIDRHKDLEDASFNDAQLCLTYLKTSGADMWFRADEKGRISSIAWAYGVQKATAVRCHSVIITDTTFNTN 777
CL H SG KV H PP+TF+NEM E++EE + I + G K ++ K L Q KRLG GK K H NDAQ L L+ G + F+ D+ GR+ IAWA QK A+R ++I D TF TN
Sbjct: 7 CLHHYFGGSGANKVEHNPPRTFENEMTDEEIEEQTAKILSMYSHGAKNPEIFKQL-QTPTKRLGGKGKEKGEAEKRGHA-------NDAQKLLKLLQAEGVWVRFQLDKDGRVGRIAWALDEQKRNALRYFPIVIQDNTFGTN 141
BLAST of mRNA_P-fluviatile_contig21.4632.1 vs. uniprot
Match: D7G8C7_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C7_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 5.990e-13 Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 559 VRTIIDRHKDLEDASFNDAQLCLTYLKTSGADMWFRADEKGRISSIAWAYGVQKATAVRCHSVIITDTTFNTN 777
+R D + ++ FNDAQL +++L+ S A M F+ADE+GRI+SIAWAY QK AVR HSVI+ D TFNTN
Sbjct: 6 MRDAFDAERKADNGVFNDAQLFVSHLQQSEAFMRFKADEQGRITSIAWAYQQQKYNAVRYHSVIVQDNTFNTN 78
BLAST of mRNA_P-fluviatile_contig21.4632.1 vs. uniprot
Match: A0A6H5KNT7_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNT7_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 2.770e-9 Identity = 31/40 (77.50%), Postives = 33/40 (82.50%), Query Frame = 3
Query: 780 VVYTDNDKAAMNAIANVYPSALNKLCLWHTYQNIREHGGG 899
VV+TD D AAM AIA VYPSALN LC+WHT NIREHGGG
Sbjct: 57 VVFTDYDAAAMLAIAKVYPSALNNLCIWHTMGNIREHGGG 96
BLAST of mRNA_P-fluviatile_contig21.4632.1 vs. uniprot
Match: A0A6H5KIJ6_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ6_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 6.360e-9 Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 3
Query: 780 VVYTDNDKAAMNAIANVYPSALNKLCLWHTYQNIREHGGG 899
V++TD D++ M+AIA V+P ALNKLC WHT QN++EHG G
Sbjct: 67 VIFTDTDQSEMSAIAQVFPGALNKLCYWHTEQNVKEHGKG 106 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig21.4632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig21.4632.1 >prot_P-fluviatile_contig21.4632.1 ID=prot_P-fluviatile_contig21.4632.1|Name=mRNA_P-fluviatile_contig21.4632.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=172bp NTEHTTHPPALRTLTGSHEPLRASSLRQQHGWFGCGRGCFDSAGAPGAAAback to top mRNA from alignment at P-fluviatile_contig21:1823966..1826289- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig21.4632.1 ID=mRNA_P-fluviatile_contig21.4632.1|Name=mRNA_P-fluviatile_contig21.4632.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2324bp|location=Sequence derived from alignment at P-fluviatile_contig21:1823966..1826289- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig21:1823966..1826289- >mRNA_P-fluviatile_contig21.4632.1 ID=mRNA_P-fluviatile_contig21.4632.1|Name=mRNA_P-fluviatile_contig21.4632.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1032bp|location=Sequence derived from alignment at P-fluviatile_contig21:1823966..1826289- (Porterinema fluviatile SAG_2381)back to top |