mRNA_P-fluviatile_contig21.4602.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig21.4602.1
Unique NamemRNA_P-fluviatile_contig21.4602.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig21.4602.1 vs. uniprot
Match: D7FIR0_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIR0_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 2.330e-115
Identity = 181/198 (91.41%), Postives = 192/198 (96.97%), Query Frame = 1 
Query: 2536 SAFNGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRISMLAVLGHIVQQNFRFPGMLSPSAGLSFADCPNGVAAISKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLINPFEKEWEAWTEEEQANKRAIELNNGRAAQMGILALMVHEQMDNTPYIINEILGSHVQFN 3129
            SAF GA+LTAAKPASSSMKMSFE+EIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRI+MLA+LGHI  QNFRFPGML+PSA LSFADCPNG+AAISKIPLYGL+QIFLFIGFLETKVMLQKEGSFPGDMSLINPFEKEWE+WTEEEQA KRAIELNNGRAAQMGIL LMVHEQ++NTPY+INEILGSHVQFN
Sbjct:   25 SAFKGASLTAAKPASSSMKMSFETEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLAILGHITAQNFRFPGMLAPSADLSFADCPNGLAAISKIPLYGLIQIFLFIGFLETKVMLQKEGSFPGDMSLINPFEKEWESWTEEEQATKRAIELNNGRAAQMGILGLMVHEQINNTPYVINEILGSHVQFN 222
[Close]
BLAST of mRNA_P-fluviatile_contig21.4602.1 vs. uniprot
Match: FCPB_MACPY (Fucoxanthin-chlorophyll a-c binding protein B, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPB_MACPY)

HSP 1 Score: 275 bits (703), Expect = 5.430e-81
Identity = 141/199 (70.85%), Postives = 163/199 (81.91%), Query Frame = 1 
Query: 2536 SAFNGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRISMLAVLGHIVQQNFRFPGMLSPSAGLSFADCPNGVAAISKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQANKRAIELNNGRAAQMGILALMVHEQMDNTPYIINEILGSHVQFN 3129
            SAFNGAALT +  A S+MKMSFESEIGAQAP+G+WDPLGLL  D  QERF+RLRYVE+KHGRI+MLA+ GH+ QQN R PGMLS SA LSFAD PNGVAA+SKIP  GL QIF FIGFLE  VM   EGSFPGD +L  NPF   W+A +EE QA+KRAIELNNGRAAQMGILALMVHE+++N PY+IN+++G+   FN
Sbjct:   20 SAFNGAALTTSAKACSAMKMSFESEIGAQAPLGFWDPLGLLA-DADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGASWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLVGASYTFN 217
[Close]
BLAST of mRNA_P-fluviatile_contig21.4602.1 vs. uniprot
Match: A0A6H5JHT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT6_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 6.860e-79
Identity = 137/199 (68.84%), Postives = 161/199 (80.90%), Query Frame = 1 
Query: 2536 SAFNGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRISMLAVLGHIVQQNFRFPGMLSPSAGLSFADCPNGVAAISKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQANKRAIELNNGRAAQMGILALMVHEQMDNTPYIINEILGSHVQFN 3129
            SAFNGAA+  +  +SS+MKMSFESEIGAQ P+G+WDPLGLL  D  QERF+RLRYVE+KHGRI+MLA+ GH+ QQN R PGMLS SA LSFAD PNGVAA+SKIP  GL QIF F+GFLE  VM   EGSFPGD +   NPF   W+A +EE QA+KRAIELNNGRAAQMGILALMVHE+++N PY+IN++LG+   FN
Sbjct:   24 SAFNGAAVATSAKSSSAMKMSFESEIGAQPPLGFWDPLGLLA-DADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSADLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 221
[Close]
BLAST of mRNA_P-fluviatile_contig21.4602.1 vs. uniprot
Match: A0A6H5KCX6_9PHAE (LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5KCX6_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 2.170e-78
Identity = 137/199 (68.84%), Postives = 159/199 (79.90%), Query Frame = 1 
Query: 2536 SAFNGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRISMLAVLGHIVQQNFRFPGMLSPSAGLSFADCPNGVAAISKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQANKRAIELNNGRAAQMGILALMVHEQMDNTPYIINEILGSHVQFN 3129
            SAFNGAA+     +SS+MKMSFESEIGAQ P+G+WDPLGLL  D  QERF+RLRYVE+KHGRI+MLA+ GH+ QQN R PGMLS SA LSFAD PNGVAA+SKIP  GL QIF F+GFLE  VM   EGSFPGD +   NPF   W+A +EE Q +KRAIELNNGRAAQMGILALMVHE+++N PYIIN++LG+   FN
Sbjct:   21 SAFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLLA-DADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYIINDLLGASYTFN 218
[Close]
BLAST of mRNA_P-fluviatile_contig21.4602.1 vs. uniprot
Match: FCPC_MACPY (Fucoxanthin-chlorophyll a-c binding protein C, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPC_MACPY)

HSP 1 Score: 267 bits (682), Expect = 3.790e-78
Identity = 138/199 (69.35%), Postives = 162/199 (81.41%), Query Frame = 1 
Query: 2536 SAFNGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRISMLAVLGHIVQQNFRFPGMLSPSAGLSFADCPNGVAAISKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQANKRAIELNNGRAAQMGILALMVHEQMDNTPYIINEILGSHVQFN 3129
            SAFNGAALT +  +SS+MKMSFESEIGAQAP+G+WDPLGLL +D  Q+ F+RLRYVE+K GRI+MLA+ GH+ QQN R PGMLS SA LSFAD PNGVAA+SKIP  GL QIF FIGFLE  VM   EGSFPGD +L  NPF   W+A + E QA+KRAIELNNGRAAQMGILALMVHE+++N PY+IN++LG+   FN
Sbjct:   19 SAFNGAALTTSAKSSSAMKMSFESEIGAQAPLGFWDPLGLL-EDADQDAFERLRYVEVKLGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSAETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 216
[Close]
BLAST of mRNA_P-fluviatile_contig21.4602.1 vs. uniprot
Match: FCPF_MACPY (Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic (Fragment) n=1 Tax=Macrocystis pyrifera TaxID=35122 RepID=FCPF_MACPY)

HSP 1 Score: 265 bits (676), Expect = 2.090e-77
Identity = 136/199 (68.34%), Postives = 158/199 (79.40%), Query Frame = 1 
Query: 2536 SAFNGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRISMLAVLGHIVQQNFRFPGMLSPSAGLSFADCPNGVAAISKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQANKRAIELNNGRAAQMGILALMVHEQMDNTPYIINEILGSHVQFN 3129
            SAFNGAAL+    +SS+MKMSFESEIGAQAP+G+WDPLGLL  D  QERF+RLRYVE+KHGRI+MLA+ GH+ QQN R PGMLS SA LSFAD PNGVAA+SKIP  GL QIF FIGFLE  VM   EGSFPGD  +  NPF   W++ + E QA+KRAIELNNGRAAQMGIL +MVHE++ N PYI N++LG+   FN
Sbjct:   14 SAFNGAALSTPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLA-DADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFIIGGNPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPYITNDLLGASYTFN 211
[Close]
BLAST of mRNA_P-fluviatile_contig21.4602.1 vs. uniprot
Match: D8LNK6_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK6_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 5.620e-77
Identity = 138/198 (69.70%), Postives = 161/198 (81.31%), Query Frame = 1 
Query: 2539 AFNGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRISMLAVLGHIVQQNFRFPGMLSPSAGLSFADCPNGVAAISKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQANKRAIELNNGRAAQMGILALMVHEQMDNTPYIINEILGSHVQFN 3129
            AFNGAA+     +SS+MKMSFESEIGAQ P+G+WDPLGLL +D  QERF+RLRYVE+KHGRI+MLA+ GH+ QQN R PGMLS SA LSFAD PNGVAA+SKIP  GL QIF FIGFLE  VM   EGSFPGD +L  NPF   W+A +EE QA+KRAIELNNGRAAQMGILALMVHE+++N PY+IN++LG+   FN
Sbjct:  181 AFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLL-EDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 377
[Close]
BLAST of mRNA_P-fluviatile_contig21.4602.1 vs. uniprot
Match: A0A6H5JDS8_9PHAE (LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS8_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 6.000e-76
Identity = 130/182 (71.43%), Postives = 150/182 (82.42%), Query Frame = 1 
Query: 2587 MKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRISMLAVLGHIVQQNFRFPGMLSPSAGLSFADCPNGVAAISKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQANKRAIELNNGRAAQMGILALMVHEQMDNTPYIINEILGSHVQFN 3129
            MKMSFESEIGAQ P+G+WDPLGLL +D  QERF+RLRYVE+KHGRI+MLA+ GH+ QQN R PGMLS SA LSFAD PNGVAA+SKIP  GL QIF FIGFLE  VM   EGSFPGD +L  NPF   W+A +EE QA+KRAIELNNGRAAQMGILALMVHE+++N PY+IN++LG+   FN
Sbjct:    1 MKMSFESEIGAQPPLGFWDPLGLL-EDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYNFN 181
[Close]
BLAST of mRNA_P-fluviatile_contig21.4602.1 vs. uniprot
Match: FCPD_MACPY (Fucoxanthin-chlorophyll a-c binding protein D, chloroplastic (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=FCPD_MACPY)

HSP 1 Score: 256 bits (653), Expect = 1.030e-74
Identity = 129/182 (70.88%), Postives = 148/182 (81.32%), Query Frame = 1 
Query: 2587 MKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRISMLAVLGHIVQQNFRFPGMLSPSAGLSFADCPNGVAAISKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQANKRAIELNNGRAAQMGILALMVHEQMDNTPYIINEILGSHVQFN 3129
            MKMSFE EIGAQAP+G+WDPLGLL  D  QERF+RLRYVE+KHGRI+MLA+ GH+ QQN R PGMLS SA LSFAD PNGVAA+SKIP  GL QIF FIGFLE  VM   EGSFPGD +L  NPF   W+A +EE Q +KRAIELNNGRAAQMGILALMVHE+++N PY+IN++LG+   FN
Sbjct:    2 MKMSFELEIGAQAPLGFWDPLGLLA-DADQERFERLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 182
[Close]
BLAST of mRNA_P-fluviatile_contig21.4602.1 vs. uniprot
Match: Q9FEP5_SACLA (Light harvesting protein lhcf3 (Fragment) n=1 Tax=Saccharina latissima TaxID=309358 RepID=Q9FEP5_SACLA)

HSP 1 Score: 252 bits (644), Expect = 2.830e-73
Identity = 126/191 (65.97%), Postives = 152/191 (79.58%), Query Frame = 1 
Query: 2539 AFNGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRISMLAVLGHIVQQNFRFPGMLSPSAGLSFADCPNGVAAISKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLINPFEKEWEAWTEEEQANKRAIELNNGRAAQMGILALMVHEQMDNTPYIINEILG 3111
            AFNGA++      SS+MKMSFE+E+G QAP+GYWDPL  L ++  QERFDRLRYVEIKHGRI MLA+LGHIVQ+N R PGMLS S   SFAD PNG+ A+SK+   G+ QI +FIGFLE  VM QKEGSFPGDMS +NPFEK+W+++ EE +  KRAIELNNGRAAQMGI  L+VHE ++N PY+IN +LG
Sbjct:    1 AFNGASMATRAKTSSAMKMSFENELGVQAPLGYWDPLYWL-ENADQERFDRLRYVEIKHGRICMLAILGHIVQENVRLPGMLSFSNDQSFADMPNGLGALSKMGPIGVAQIVIFIGFLEVFVMKQKEGSFPGDMSRVNPFEKQWDSFDEETKLRKRAIELNNGRAAQMGIFGLIVHEVINNQPYVINNLLG 190
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig21.4602.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIR0_ECTSI2.330e-11591.41Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
FCPB_MACPY5.430e-8170.85Fucoxanthin-chlorophyll a-c binding protein B, chl... [more]
A0A6H5JHT6_9PHAE6.860e-7968.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCX6_9PHAE2.170e-7868.84LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepI... [more]
FCPC_MACPY3.790e-7869.35Fucoxanthin-chlorophyll a-c binding protein C, chl... [more]
FCPF_MACPY2.090e-7768.34Fucoxanthin-chlorophyll a-c binding protein F, chl... [more]
D8LNK6_ECTSI5.620e-7769.70Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JDS8_9PHAE6.000e-7671.43LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
FCPD_MACPY1.030e-7470.88Fucoxanthin-chlorophyll a-c binding protein D, chl... [more]
Q9FEP5_SACLA2.830e-7365.97Light harvesting protein lhcf3 (Fragment) n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig21contigP-fluviatile_contig21:1421664..1427123 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score374.0
Seed ortholog evalue6e-101
Seed eggNOG ortholog2880.D7FIR0
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2CDPH@1,2S3EU@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-20_003280.1
Exons3
Model size4238
Cds size825
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig21.4602.1prot_P-fluviatile_contig21.4602.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig21 1423971..1426017 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815942.6706913-UTR-P-fluviatile_contig21:1421663..14239701622815942.6706913-UTR-P-fluviatile_contig21:1421663..1423970Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 1421664..1423970 +
1693563798.3539484-UTR-P-fluviatile_contig21:1421663..14239701693563798.3539484-UTR-P-fluviatile_contig21:1421663..1423970Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 1421664..1423970 +
1622815942.7220657-UTR-P-fluviatile_contig21:1426017..14271231622815942.7220657-UTR-P-fluviatile_contig21:1426017..1427123Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 1426018..1427123 +
1693563802.2059522-UTR-P-fluviatile_contig21:1426017..14271231693563802.2059522-UTR-P-fluviatile_contig21:1426017..1427123Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 1426018..1427123 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815942.6857352-CDS-P-fluviatile_contig21:1423970..14243391622815942.6857352-CDS-P-fluviatile_contig21:1423970..1424339Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 1423971..1424339 +
1693563798.36366-CDS-P-fluviatile_contig21:1423970..14243391693563798.36366-CDS-P-fluviatile_contig21:1423970..1424339Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 1423971..1424339 +
1622815942.6979954-CDS-P-fluviatile_contig21:1424816..14250411622815942.6979954-CDS-P-fluviatile_contig21:1424816..1425041Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 1424817..1425041 +
1693563798.3721967-CDS-P-fluviatile_contig21:1424816..14250411693563798.3721967-CDS-P-fluviatile_contig21:1424816..1425041Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 1424817..1425041 +
1622815942.7091508-CDS-P-fluviatile_contig21:1425786..14260171622815942.7091508-CDS-P-fluviatile_contig21:1425786..1426017Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 1425787..1426017 +
1693563800.7066033-CDS-P-fluviatile_contig21:1425786..14260171693563800.7066033-CDS-P-fluviatile_contig21:1425786..1426017Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 1425787..1426017 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig21.4602.1

>prot_P-fluviatile_contig21.4602.1 ID=prot_P-fluviatile_contig21.4602.1|Name=mRNA_P-fluviatile_contig21.4602.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=275bp
MSCFLERILLWFGARRLAARLFISRFYPSTLSSEPTLPDVCYTSPIRAKY
CHCRERYFSIHTQLACLIFHLFRAICSAFNGAALTAAKPASSSMKMSFES
EIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRISMLAVLGHIVQ
QNFRFPGMLSPSAGLSFADCPNGVAAISKIPLYGLVQIFLFIGFLETKVM
LQKEGSFPGDMSLINPFEKEWEAWTEEEQANKRAIELNNGRAAQMGILAL
MVHEQMDNTPYIINEILGSHVQFN*
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mRNA from alignment at P-fluviatile_contig21:1421664..1427123+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig21.4602.1 ID=mRNA_P-fluviatile_contig21.4602.1|Name=mRNA_P-fluviatile_contig21.4602.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5460bp|location=Sequence derived from alignment at P-fluviatile_contig21:1421664..1427123+ (Porterinema fluviatile SAG_2381)
ACCCAAACACAGAGGAACCATGCAGACTGCTTGTGCCTTGGCTGTTGCTT
GCGCTGCTGGCGTAAATGCCTTCGTGGCGCCCAGGTGAGAACGTTGTTTT
CGCGCTTCATGAACATCGGCTGGCATATAGGCTGTTTTGGGCCTCTCCTT
CGAGTCATCCGGTATCCTCGCTGTGCAGGTTCTCAACTGCCGCGTCATTC
ACGCACAGCTGCAGCTCTCTTACAGAAGAGGAGATCATGCCCCTTTGCTT
TCAACGATCAACTCACAGCATGCACTGTCAATGTGCTTCGTTAGTGCCGA
ACCTCGCGTTGTTTTCGACATCATTCGCGGTGAACTCGCTCTTGTTGCAA
GGTTAAAGTGTGTCCTAATCTCATATACTTTTGGTACCAGGCATTTGTCC
CAGCGACGCGCCTGCCATGGGCATGGCATGAGTGGGAGAGACACGAGAGG
TCCTTGATCGACCCGTGGGTTTCCAGCAGGCTTTGCTCTCCTCTACACTT
TCCTCGCTACCTGTAGTACTACCTCGCCGCAAATGCACAACTCGTGTGGA
ATTGACGTGGAACGAGGATCATGCGTGTGTCTTCTGGGAGCTGTGTGTGT
GCTCAACAGAAATCTGCAAACCATCATTTTGCTCGTTCTGCTGCCAAGCC
AATAAGCGGTGTACAGCGGACTGCTTTGTGGACAGGTACGCATCCGCTGC
TACCCCGAGAGGAGCTTTCGGTGTGGGGAGTGTTCGGTTCGTGGACACAG
CGTGTAGGGGGGTGTAGATGCCCTTATTTCTTTCCTTCCTCTGTCTCTCC
GGCCATCACGTCTAGTCCAAACGCTCTTTCACATGAAGCGACAGTGATCA
CGGAGACGGCAGATGTTTCGTCCTTTATCTAGTTCAGAGGAGGAGTTCGT
GTATGATGACGAAAAGCACTTCGACCACCCGGCGCGCCGACACACCGCAG
TTTTCCAGACATCACAGTCGGCACCACGTCCAACATGCACCCAATCCCGG
GCGTTTTTGGACGTGAGGCTCACGCAATTTAACACCCCGCCGACAGTTTC
TTCGACACAAGCGCCCATTTTTCCCGTCAGCAGTCCTGACTCAAGAATTG
GCGGGTTCACCAGCTCCTATGTTGCCCCTGAATAGTTCAAATGCGATGTG
ATGGGGGGCTTTCGCTCCACACTTATCGGTGCTCAGCGTGTCACGTGGCC
TAATGAGCGCCCGCCTGTCGCGTTTCAAACTTGAAACAGGCAAGGACACT
TGGAGTGGCAGCAAGCGCGACGAGCCATGTAGTGGCACTCAACTGTCGTT
AAAACATGCCGTCGTGGCCCTGTGGCAAAGCCTTGATGCAGTGTGCGGAG
TTCTCTGCACATATGCTCATGTCGCCAGGCGCCGTAGCTGCAAGTTGACT
TGACGGCAGCCATCACCAACGGCAGTAGTAACCCTCGATTTCCTCCGTAT
GCAGCTGTAGTTCAACCCCCCTGCTCTACATAACCTACCCTCCCCCATGA
TTCGAAAGGCGTTATATTGAGCCCACAAATCCGAAAGCACTCAAGCGCTC
GCCGAATCGACCGAGCGGTGCTTCTGCGGGCCCGTGATGGCTGGAGGCAC
GTATCTTTCTAGCCTCATGTGCGCAGAACCATAGCTCTTGCTCCCTCGGG
CGTGGGCAACGATTTGGTCACCTGTTGGTCAGCTGCATATGGGCTCGTCA
AAACCTGCCGCACACAAGCAGTATTTGCTGCCGAGCACCTCCCGACGTAC
GCAACACGGCTGAAAAGCATTGTTTGCTTCTCGTGCTGCGCAAGTAAACG
CAACCGTATCGGCTAAGGCAATCCACGCGCCGAGTAGCCACATAAAACGA
AATTTCACTTGCTCGAGGTGCACGCGGAAGACATAGAAATGGTCGAGTAC
CGAGAGAGCACACGTCATCCGAGGCGGATTTCCAGCGATCGCGAGAATGG
TTCGCCCTTCCTCATTCGTCGCACGCCCCATCCTGACCCCCCTCAGTCCT
GGATAGAATACACTCGGAAGACCTGGACAGTGTCCCCCGATCGTCTGCCC
CAACCCCCATGCCACTAAGGCACTGACACGCGGCCTCGGCGGCAGGTCGA
AGCGATCATAAGACGCCGCAGATCGTTGGGTTTCACATGACCTATTGCAT
TGGTGGATTGACAAGGGATGGCATTTCGCCCCCCTCCTCTGCAGCATTGT
TGGTCGCATCCGCCTTCGCTTCCCTTTTTTCTCGTTTCACCTATCGGGGG
TACAATTGTGCACACCCCGCAGTAAGCACGCGCCTCACGTGACGAGAAAC
CTTCGACATGTCCTGTTTTTTGGAACGTATTTTGCTGTGGTTTGGGGCCC
GTAGGTTGGCTGCAAGATTATTCATCTCCCGTTTCTATCCCTCAACGCTT
TCCTCGGAGCCCACCTTGCCCGACGTCTGTTACACGAGTCCGATTCGAGC
TAAATATTGTCACTGCAGAGAGCGGTATTTTTCGATCCACACCCAGCTTG
CATGCCTCATCTTCCATTTGTTCCGCGCTATCTGCAGCGCCTTTAACGGA
GCCGCGTTGACGGCCGCGAAACCCGCATCTTCCTCCATGAAGATGTCATT
CGAGTCGGAGATCGGGGCCCAGGCGCCCATCGGCTACTGGGATCCCCTTG
GCCTCCTGACCAAGGACCCATCCCAGGTCAGTTTTCACTGTAGGAACTGG
GCGGGGGGTGGGGAGGCAGTTTGGATAGGGTGTGCCATCTATCCCTTGCG
AAAGCGTACCCACTGTTCATTTATGTTTTTGTTTGTACGGGTACTTGTTT
TGTAAACCACGCAAACTTTCGAAATCATCAGGGTGAGGCGCCACGGGGCT
CGTTTCGGTGCACAAGCTTGACTTCTCCAAGCCGAGTCACTTGGTTCGTA
CGGTTCCTCGTCCCACCAGCGTGATACGAGGTGCCTATCATCGAAGTAAC
AGGTGTTGCACGCGTCGGCCCGAGGGACCGCTTTCCGTCCCGCGCTCCGT
CATACACAAGTACGTTCATTCAGACTTCGACCACCGTCTTGTCGCCTCAG
CACCGTCTCGTGCACCAATCTTCTATCCCCCAACTTCTCGCCCCTCCCTA
CACCACCCTTCCCCTCACACCAACCCGTCTGTTCTTTCTCTAAACACGCG
CAGGAGCGTTTCGACCGTCTCCGGTACGTTGAGATCAAGCACGGCCGCAT
CTCGATGCTCGCTGTGCTCGGCCACATCGTCCAGCAGAACTTCCGGTTCC
CGGGCATGCTGTCCCCCTCCGCCGGCCTCTCCTTCGCGGACTGCCCCAAC
GGCGTCGCCGCAATCTCTAAGATCCCCCTCTACGGCCTGGTGCAGATCTT
CCTCTTCATCGGTTTCCTCGAGACCAAGGTAGGCTTGTGGCATGTCTCTG
AAAGGCTATTCACAGTTTTTGCGCGCCGTTGTCGAACAGGCCGAGACGTT
TTCTTTCAGAGCAGTTGTTAATCGTTGCCTTTGCCCCCCCCTATACGGCC
TCGTGTAGGTCGTCCTCTTCATCATATTCCTTGTGACCAAGGTGTGGTGT
GCTTTTTGTCTAGAAGATTGTTGATGTCTGCGCACCGTTTGGATATTTTT
GTCCTGCACGTCGTCGCAAACGTGAGTGGTCTTCGATACCTCTTCTGAAG
AATTTTTCGCAATGAAACCCGCCAAAGCTGGTAGTACCCTCTAAGTACGG
TTGCTCGTCGTTTGACCCGGATTGCTTCCGTGGTGAAAGCAGATGCCCTA
TTAGACAAAACCGTTCACTTCCGGAGTCGAACGGAAGGTCACTGACATCC
AAAGGCGCCACAAGAATACAAAGGTGTCGAAAGGCATTAGTGTAGTCTGC
GAAAAGGTGCGCACATTGTACAGTGGGCCCACTAACCTGCGCAGCTCCTA
GGGGATACTTCGGGAACAACGTCTTGTGAAGCCCCGCCGCGCATGTATCC
GTCCCGAGCATGGGGCAACGGCGGAATCCTTTTTTTGTCAAAGAACTTGT
GGTGGCACCGTGTCCGACGTTGAATGATTTTTCCAGCGTTCTTTGTGTTT
GGACCTGCGTTGGGAGCATCCACGCCCCCGCCCCGTCTTTCCGGCCCTTC
TTTGGTTTCCGCTTCCTCCTCAGGTCATGTTGCAGAAGGAGGGATCATTC
CCCGGAGACATGTCGCTCATCAACCCCTTCGAGAAGGAGTGGGAGGCGTG
GACGGAGGAGGAACAGGCCAACAAGCGCGCGATCGAGCTCAACAACGGCC
GCGCGGCGCAGATGGGCATCCTCGCGCTCATGGTGCACGAGCAAATGGAC
AACACCCCTTACATCATCAACGAGATCCTCGGATCGCACGTGCAGTTCAA
CTAAACCAGAGGAAGAAATCTTGGCTGACTTGTTCATTTTTCCTTCTTTG
GACCTGTTTTTTTTTCCACTTCTTTCGCGACGATTGGGGTGGGCGGGGCG
TAAATGAAACGGAATTAATTTAATGAGCGAAAGGTGCTATGGATCCTGCA
GTCGGTCCGTTCATCGTTGGCGCTTTAGCGTGTCAAACATTCCATGTTTC
GTCTAATTCCACTGATTTCGTACGTCGCGGGGGCACGTAGATGGGGTCTG
TGGGAGGTAGGGGAAAGGGTGTTGCTGGACGCGTCACGCACCAGACCCCC
AGATTCGATTACTTGATTTTTGAAAACAGTGTGACCGCATCCAAAAATTG
TTGACCCAAGAGTTTTCGATTCGTCCTCCCTTTGAGGTCGGGCGTCCAAG
GTTGGAGCCCCGAACCCAGAGTAGTGCTGTGGACTCCATGTTGCAGGTTG
GATTCGCTCTACGACCCGTCGATAAGTCAAAGTTCATTCCAGTGAGTGTG
ATAGGAGAGGATGACCCCCCCCCCCCTTTCCCCCAAAGCCACCGCACGGC
TTCTCAAACTCATCGTCCGCTTACGGTCGAATGTCGGGCGTGTTTCGTCT
GATGAAGATTCCCTGTCCCTGAAAACCACCATACCTCCGAGCGCTTTGAC
CCCTCATGTCCCGCGTCCCTGTCGAGAACGTGGACGTTCTCGCTGTCGCG
CTCGCTCGCTCTCACCTTCCCACGTTCTGAGTGTTCCGAGTCTCGGGAGG
TCAAGATGAATTTCTGGAGACGAGTGGGGCGTTTGCCTTCGAGTGCAGCA
AGATTTTTGCCGACGATCCCCGGGTGGCGTGTGTAAAGTTTCAACCTCGG
CCGGCTGAAAACTGTAACGCTTATTTGAAAGGAGTCCACTTGTCACCGGG
GCACCGTGAAACGCAGTCTCATGCAGTCACTCCCTCTACGAGGTCATGTC
TTGTTCAAAAAGAGGCCGACCTGCTGTCCCAAGGGAACAGCCTACATTTT
TCCAAGTTGCCTGGATGCTTGTCTTAAGGGTCACATGACTGGGCGGCGCA
CATAATGTTGCCAAGTTCGCTGTCGGCAGTTAGTCGCTGCCACGTGCCGT
TGAAGCCACT
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Coding sequence (CDS) from alignment at P-fluviatile_contig21:1421664..1427123+

>mRNA_P-fluviatile_contig21.4602.1 ID=mRNA_P-fluviatile_contig21.4602.1|Name=mRNA_P-fluviatile_contig21.4602.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1650bp|location=Sequence derived from alignment at P-fluviatile_contig21:1421664..1427123+ (Porterinema fluviatile SAG_2381)
ATGTCCTGTTTTTTGGAACGTATTTTGCTGTGGTTTGGGGCCCGTAGGTT
GGCTGCAAGATTATTCATCTCCCGTTTCTATCCCTCAACGCTTTCCTCGG
AGCCCACCTTGCCCGACGTCTGTTACACGAGTCCGATTCGAGCTAAATAT
TGTCACTGCAGAGAGCGGTATTTTTCGATCCACACCCAGCTTGCATGCCT
CATCTTCCATTTGTTCCGCGCTATCTGCAGCGCCTTTAACGGAGCCGCGT
TGACGGCCGCGAAACCCGCATCTTCCTCCATGAAGATGTCATTCGAGTCG
GAGATCGGGGCCCAGGCGCCCATCGGCTACTGGGATCCCCTTGGCCTCCT
GACCAAGGACCCATCCCAGATGTCCTGTTTTTTGGAACGTATTTTGCTGT
GGTTTGGGGCCCGTAGGTTGGCTGCAAGATTATTCATCTCCCGTTTCTAT
CCCTCAACGCTTTCCTCGGAGCCCACCTTGCCCGACGTCTGTTACACGAG
TCCGATTCGAGCTAAATATTGTCACTGCAGAGAGCGGTATTTTTCGATCC
ACACCCAGCTTGCATGCCTCATCTTCCATTTGTTCCGCGCTATCTGCAGC
GCCTTTAACGGAGCCGCGTTGACGGCCGCGAAACCCGCATCTTCCTCCAT
GAAGATGTCATTCGAGTCGGAGATCGGGGCCCAGGCGCCCATCGGCTACT
GGGATCCCCTTGGCCTCCTGACCAAGGACCCATCCCAGGAGCGTTTCGAC
CGTCTCCGGTACGTTGAGATCAAGCACGGCCGCATCTCGATGCTCGCTGT
GCTCGGCCACATCGTCCAGCAGAACTTCCGGTTCCCGGGCATGCTGTCCC
CCTCCGCCGGCCTCTCCTTCGCGGACTGCCCCAACGGCGTCGCCGCAATC
TCTAAGATCCCCCTCTACGGCCTGGTGCAGATCTTCCTCTTCATCGGTTT
CCTCGAGACCAAGGAGCGTTTCGACCGTCTCCGGTACGTTGAGATCAAGC
ACGGCCGCATCTCGATGCTCGCTGTGCTCGGCCACATCGTCCAGCAGAAC
TTCCGGTTCCCGGGCATGCTGTCCCCCTCCGCCGGCCTCTCCTTCGCGGA
CTGCCCCAACGGCGTCGCCGCAATCTCTAAGATCCCCCTCTACGGCCTGG
TGCAGATCTTCCTCTTCATCGGTTTCCTCGAGACCAAGGTCATGTTGCAG
AAGGAGGGATCATTCCCCGGAGACATGTCGCTCATCAACCCCTTCGAGAA
GGAGTGGGAGGCGTGGACGGAGGAGGAACAGGCCAACAAGCGCGCGATCG
AGCTCAACAACGGCCGCGCGGCGCAGATGGGCATCCTCGCGCTCATGGTG
CACGAGCAAATGGACAACACCCCTTACATCATCAACGAGATCCTCGGATC
GCACGTGCAGTTCAACTAAGTCATGTTGCAGAAGGAGGGATCATTCCCCG
GAGACATGTCGCTCATCAACCCCTTCGAGAAGGAGTGGGAGGCGTGGACG
GAGGAGGAACAGGCCAACAAGCGCGCGATCGAGCTCAACAACGGCCGCGC
GGCGCAGATGGGCATCCTCGCGCTCATGGTGCACGAGCAAATGGACAACA
CCCCTTACATCATCAACGAGATCCTCGGATCGCACGTGCAGTTCAACTAA
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