mRNA_P-fluviatile_contig21.4591.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig21.4591.1
Unique NamemRNA_P-fluviatile_contig21.4591.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig21.4591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig21contigP-fluviatile_contig21:1256272..1258562 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size816
Cds size714
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig21.4591.1prot_P-fluviatile_contig21.4591.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig21 1256272..1258462 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815924.4414878-CDS-P-fluviatile_contig21:1256271..12565231622815924.4414878-CDS-P-fluviatile_contig21:1256271..1256523Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 1256272..1256523 -
1693563751.5393775-CDS-P-fluviatile_contig21:1256271..12565231693563751.5393775-CDS-P-fluviatile_contig21:1256271..1256523Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 1256272..1256523 -
1622815924.452609-CDS-P-fluviatile_contig21:1257179..12575821622815924.452609-CDS-P-fluviatile_contig21:1257179..1257582Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 1257180..1257582 -
1693563751.557297-CDS-P-fluviatile_contig21:1257179..12575821693563751.557297-CDS-P-fluviatile_contig21:1257179..1257582Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 1257180..1257582 -
1622815924.464285-CDS-P-fluviatile_contig21:1258403..12584621622815924.464285-CDS-P-fluviatile_contig21:1258403..1258462Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 1258404..1258462 -
1693563751.5788743-CDS-P-fluviatile_contig21:1258403..12584621693563751.5788743-CDS-P-fluviatile_contig21:1258403..1258462Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 1258404..1258462 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815924.475242-UTR-P-fluviatile_contig21:1258462..12585621622815924.475242-UTR-P-fluviatile_contig21:1258462..1258562Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 1258463..1258562 -
1693563751.5914721-UTR-P-fluviatile_contig21:1258462..12585621693563751.5914721-UTR-P-fluviatile_contig21:1258462..1258562Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 1258463..1258562 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig21.4591.1

>prot_P-fluviatile_contig21.4591.1 ID=prot_P-fluviatile_contig21.4591.1|Name=mRNA_P-fluviatile_contig21.4591.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=238bp
MVPEVSIARASLGEESKRWRVKRRRPAANPGQEARCREPARAKYLPPSPR
SSTVTTLEAANNDGKFDVSTNDGIEAFDRGYREPLQRCGLGAAAEPGGKA
YEDETTHQAGRLTAMGDEEMEGLRRRWRRRLLSNEMFVDNFGRSIPKLGL
LPQQVSWSLTQECRCLSAVGRQHPRRRSRASAATCTADDSPSPDAKVSPP
QPPVAPGTRKRGGECFNGGRANKIVGGNDNHTYSGGDG
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mRNA from alignment at P-fluviatile_contig21:1256272..1258562-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig21.4591.1 ID=mRNA_P-fluviatile_contig21.4591.1|Name=mRNA_P-fluviatile_contig21.4591.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2291bp|location=Sequence derived from alignment at P-fluviatile_contig21:1256272..1258562- (Porterinema fluviatile SAG_2381)
GTCTATCTGTCTGTCTGATTTCTGTCGACCCCCTTGTAATAAAAGAGAGC
CTAGTCTTGTCTATTAACTCATCGCTTGCCAGGACCGTAATGGGTGACTC
ATGGTGCCTGAAGTGAGCATTGCTCGAGCGAGCCTTGGAGAGGAATCCAA
GCGATGGAGGTGAGATTTCTCGCTCCGGAGTGTTTGCCGCAAGTTGACGG
CTCATGAACAGTGATGTGTTCATCCCGTGTGTGTTTCACATGATGACGTG
CAGCACTGGGCGATGGTGTGACCGTCAAGGTTTTCAAAATAGCTGCTTTG
TTCGCTGCACGTGTTTCTTCGGCAAAGCAGTGAATTTTATATTCCCATCA
CCGAGATCATGCGAGTGCAGCTCGTGAATCGTCGCGATTTGAAGCGGAGC
CAAGCTGTAGCTGAGATATGGTAGACACTTGCCTTTCCGACAAGTCCAGA
GATGCCGTGAGGATCATTGTGGTTCCCAATTTACGTCGTTTTGGGCAAAA
GACGCCAGTTTGTTTTCCACAGCACAAGGGCAAGGTGTTTGGAAGCGTAA
GGGACAACATGTCCTCGTACGTGCTGTGCTCTCAAATAAAGGCACGCTCA
GCCAGGACGTATGCAGCGCACAGCTGCCAAGCTTCTGAGCGTGCGCAATT
TAGAATTAGAGCCATTTCCACCTCCTAGGATGGTCGGTTTTGAGGGGAAG
CCCGAAGTATGAGGGCGCCGCATATTTCGTTGGCTATGGTTTTTGTGAAG
ATTAGACCACTCAGCGATAGACCAGTCGGCCACTCAGGGTCAAAGGCTAG
CCGGGTACGAAGCGAGTGGTCTACGCTCCTTAACATTTTAGGTTTCGTCA
ACTTCAACCATTGCACGCAAACGACTTCTCAGTTCAACCTCCTCACTGCC
TCGACGCCACCATCGTGCGTCCATCCACCATCGTCTTCCCCGATAACCCC
GACACTGTGCATTGGGTCCTTGTTTGCCAGGGTGAAACGTCGGAGACCGG
CTGCCAACCCCGGCCAAGAGGCGCGGTGCCGCGAGCCTGCCCGCGCCAAA
TATCTACCACCATCGCCGAGGAGTTCGACCGTCACCACACTCGAAGCGGC
CAACAACGACGGCAAGTTTGACGTGAGCACAAATGATGGCATCGAAGCAT
TCGACCGCGGATACCGCGAGCCTCTGCAGCGTTGCGGGCTAGGAGCGGCG
GCAGAGCCTGGGGGCAAGGCCTACGAAGACGAGACAACACATCAAGCTGG
AAGGCTCACGGCGATGGGAGACGAAGAGATGGAAGGGCTGCGGAGACGCT
GGCGGCGGCGGTTGTTATCGAACGAGATGTTCGTTGATAACTTTGGGCGA
TCGATTCCTAAGCTCGGTCTTTTGCCACAGCAGGCAAGAACCCGTGAAAG
TTTGTACATTGCAGGCTAAACCAATAACGCCTATTCCCCTCGAAAACTCA
AAACAAGGACGAACTCGCGCACTTGCTCCCCGCGCCATAACCTCTCAAAA
CACATCCACGTCCGGTACCATCAGGTTGCACCGTAGCAGGGGTGGTGCCT
AGGAGTGCAGTTTTTTGCGGGTGTACTATCCACGTCCAGACTGTCCGCTA
TGGTTTGTGGTCGCTACTTGTCGCTTGAATCGCGTGTATCGCCGTCCCTT
TATTGTATGCTTCACTTCCGCAACACTTCTGCCCGGTTTACCGAGAGAAG
ATGAAAATGGCTACCTTTGACGCATGATGGCGAGGCTCATCCATTTCAAA
GCGCAGCAGTTGTAGCGCAAGTCGCGACTCACGTTGAGACAAAACATGAA
AAAATATCAGCAGCGTAAGGGGGGGCAGCGCTATCAAACATGTGGATCCG
TGGTCATCTTGTTCTCCGAGCTCGTCAAGCCCTTTCCGTACTGCGGTGCT
ACACCGGCCTCGCAATTTCTCCGCATGCTCGGCGTCTGGCCGTACACGCT
GTCGCCTCACTTATCCGCTGGACCGATACGCGCCGAAAACATGTCTCTTG
TCGGAACGTCGGGACGCAACACTCGTGAAACAATAACAGGTGTCCTGGTC
TCTCACGCAGGAATGCCGATGCTTGAGCGCCGTCGGCCGCCAACACCCCC
GCCGGCGTTCACGCGCCTCCGCTGCTACTTGCACAGCGGACGACTCCCCC
TCCCCAGACGCTAAGGTGTCCCCGCCGCAACCGCCCGTAGCACCGGGGAC
CCGCAAACGTGGTGGCGAATGCTTCAACGGCGGCCGCGCCAACAAAATTG
TCGGTGGAAATGACAACCATACCTATAGCGGCGGCGACGGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig21:1256272..1258562-

>mRNA_P-fluviatile_contig21.4591.1 ID=mRNA_P-fluviatile_contig21.4591.1|Name=mRNA_P-fluviatile_contig21.4591.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1428bp|location=Sequence derived from alignment at P-fluviatile_contig21:1256272..1258562- (Porterinema fluviatile SAG_2381)
ATGGTGCCTGAAGTGAGCATTGCTCGAGCGAGCCTTGGAGAGGAATCCAA
GCGATGGAGATGGTGCCTGAAGTGAGCATTGCTCGAGCGAGCCTTGGAGA
GGAATCCAAGCGATGGAGGGTGAAACGTCGGAGACCGGCTGCCAACCCCG
GCCAAGAGGCGCGGTGCCGCGAGCCTGCCCGCGCCAAATATCTACCACCA
TCGCCGAGGAGTTCGACCGTCACCACACTCGAAGCGGCCAACAACGACGG
CAAGTTTGACGTGAGCACAAATGATGGCATCGAAGCATTCGACCGCGGAT
ACCGCGAGCCTCTGCAGCGTTGCGGGCTAGGAGCGGCGGCAGAGCCTGGG
GGCAAGGCCTACGAAGACGAGACAACACATCAAGCTGGAAGGCTCACGGC
GATGGGAGACGAAGAGATGGAAGGGCTGCGGAGACGCTGGCGGCGGCGGT
TGTTATCGAACGAGATGTTCGTTGATAACTTTGGGCGATCGATTCCTAAG
CTCGGTCTTTTGCCACAGCAGGGTGAAACGTCGGAGACCGGCTGCCAACC
CCGGCCAAGAGGCGCGGTGCCGCGAGCCTGCCCGCGCCAAATATCTACCA
CCATCGCCGAGGAGTTCGACCGTCACCACACTCGAAGCGGCCAACAACGA
CGGCAAGTTTGACGTGAGCACAAATGATGGCATCGAAGCATTCGACCGCG
GATACCGCGAGCCTCTGCAGCGTTGCGGGCTAGGAGCGGCGGCAGAGCCT
GGGGGCAAGGCCTACGAAGACGAGACAACACATCAAGCTGGAAGGCTCAC
GGCGATGGGAGACGAAGAGATGGAAGGGCTGCGGAGACGCTGGCGGCGGC
GGTTGTTATCGAACGAGATGTTCGTTGATAACTTTGGGCGATCGATTCCT
AAGCTCGGTCTTTTGCCACAGCAGGTGTCCTGGTCTCTCACGCAGGAATG
CCGATGCTTGAGCGCCGTCGGCCGCCAACACCCCCGCCGGCGTTCACGCG
CCTCCGCTGCTACTTGCACAGCGGACGACTCCCCCTCCCCAGACGCTAAG
GTGTCCCCGCCGCAACCGCCCGTAGCACCGGGGACCCGCAAACGTGGTGG
CGAATGCTTCAACGGCGGCCGCGCCAACAAAATTGTCGGTGGAAATGACA
ACCATACCTATAGCGGCGGCGACGGCGTGTCCTGGTCTCTCACGCAGGAA
TGCCGATGCTTGAGCGCCGTCGGCCGCCAACACCCCCGCCGGCGTTCACG
CGCCTCCGCTGCTACTTGCACAGCGGACGACTCCCCCTCCCCAGACGCTA
AGGTGTCCCCGCCGCAACCGCCCGTAGCACCGGGGACCCGCAAACGTGGT
GGCGAATGCTTCAACGGCGGCCGCGCCAACAAAATTGTCGGTGGAAATGA
CAACCATACCTATAGCGGCGGCGACGGC
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