mRNA_P-fluviatile_contig21.4556.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig21.4556.1
Unique NamemRNA_P-fluviatile_contig21.4556.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig21.4556.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig21contigP-fluviatile_contig21:849422..851859 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons2
Model size1356
Cds size783
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig21.4556.1prot_P-fluviatile_contig21.4556.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig21 849962..851826 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815924.190536-UTR-P-fluviatile_contig21:849421..8499611622815924.190536-UTR-P-fluviatile_contig21:849421..849961Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 849422..849961 -
1693563751.265028-UTR-P-fluviatile_contig21:849421..8499611693563751.265028-UTR-P-fluviatile_contig21:849421..849961Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 849422..849961 -
1622815924.2308156-UTR-P-fluviatile_contig21:851826..8518591622815924.2308156-UTR-P-fluviatile_contig21:851826..851859Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 851827..851859 -
1693563751.293133-UTR-P-fluviatile_contig21:851826..8518591693563751.293133-UTR-P-fluviatile_contig21:851826..851859Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 851827..851859 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815924.2020586-CDS-P-fluviatile_contig21:849961..8505621622815924.2020586-CDS-P-fluviatile_contig21:849961..850562Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 849962..850562 -
1693563751.2767987-CDS-P-fluviatile_contig21:849961..8505621693563751.2767987-CDS-P-fluviatile_contig21:849961..850562Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 849962..850562 -
1622815924.2178266-CDS-P-fluviatile_contig21:851644..8518261622815924.2178266-CDS-P-fluviatile_contig21:851644..851826Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 851645..851826 -
1693563751.2851136-CDS-P-fluviatile_contig21:851644..8518261693563751.2851136-CDS-P-fluviatile_contig21:851644..851826Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 851645..851826 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig21.4556.1

>prot_P-fluviatile_contig21.4556.1 ID=prot_P-fluviatile_contig21.4556.1|Name=mRNA_P-fluviatile_contig21.4556.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=261bp
MALNSPRMRATPRPCGITTFSLVLASACFLVSAEQPSWGWSNKPPPHSKQ
PRQPTDAGDPWYATRDATAQDPWVSGGEAGREQQYPYAEEDAYDYPSAPP
PPPPPPGRPGRQQEWAGNAGIPSGGRISSSRSKARRRGKKRGRPSVGGGV
GGGGRPGEDSFDEVRNAPATGLCRTPFQQAHVLSRMFAGHERLSMIFFIV
AFLHFVCVSFGFARILVLSHATRGTLILWHAQILGPGCPRGFLFFLGPWS
VALVPVHVES*
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mRNA from alignment at P-fluviatile_contig21:849422..851859-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig21.4556.1 ID=mRNA_P-fluviatile_contig21.4556.1|Name=mRNA_P-fluviatile_contig21.4556.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2438bp|location=Sequence derived from alignment at P-fluviatile_contig21:849422..851859- (Porterinema fluviatile SAG_2381)
CTCGTTTCGAGACACACACTTTCTCGCGTAGCAATGGCACTCAACTCCCC
TAGAATGCGTGCCACGCCGCGACCCTGCGGCATCACCACGTTCTCTCTTG
TTCTCGCATCAGCGTGCTTCCTGGTGTCCGCCGAGCAGCCGTCATGGGGA
TGGAGCAACAAACCGCCACCACACTCAAAACAGCCTCGACAACCGACGGA
TGCGGGCGACCCTTGGTAAGCGGAGGGCAGAGGTGTTCGTCAAGGTTTCA
TACCATATCAGGACGAGGTACAGCTCCCGGTCGTGACTGCAGCAACCATT
TTTTTCTGCAAATTACAAGAACAGAACGATCGACGTGTACTCCATTTTTT
AAAAATGCGCACGTTTGCTCGCTCTCCGTCTTATCGCTGTCCCGCTCGCT
CTCCTTCCCCGCCATTGTCCACGTGTGTGCGCCAGGGACACTCTCGCCCC
TCCACTCTCTGTCTACCGACACATTGCCGAGGCATCATCGCACATCTGTT
TCAATCTTCTTGGCGAGACCTTATGTGTTGCTGAAAATGCGCGCACACTC
TCCCGGGTGCGGGCCTGAAACATGACAATGCGGGACACGGGAGGTTCGAT
TTTAACGGACAGCATAATGTTAAGCAGCAGCAGCAGTCATTACTGCTGTA
GCCCGCAGAGCCCTGTCGCTTTCAGCTGCCGTAACCGACTACGCGGTCCT
GGAATTGCCTTGCGCAGTTGCTGTTCGGCTACGCATGACTAAGGAAGAGC
TGTTCTACGATCCTGCGGACGGGGATAACCACGGGGCTAGGTGTATCTTA
GCGGAATTGGCCTATTGAAGCTTTCGACTCTCTCAACTTGACCACCAATC
CGCATTTGAGAGAGAGAGAGAGGAGGTACCCCACGTTTGATACTTTCTTG
CAGGGGGTCCTACGATTGGGCCTTCCCAGCAGCGTAAACACGAAGAGAAA
CGCCGCGGCGGGGCGTACACCAAAAACCACCTCTGGTATTTCACCACTTG
GCAGTTCACAAGACTTGGCGCTTGAGACATGCCTGATTGTTTGAACATGA
TGTCGTTTTCCCCGTCTGGATGTTTCGTGAGGCACGTTGGACGTCCCAAT
CATGCTAGATGGCTGCCCAGTTCCCCCGCATTGGTGTCTACAGCCAACCA
AACAGCCGCCACCCTCGTCACACCCCCGCGCCCCCACCGACTTCGGTATC
CTCCCCCCGTCATCGGCGTTTACGTCTACTTGTCTGTCCCGCTCTCGGCC
GGTCTCCTCCATCTCCCGCGGTCGGACTGGATTCCGCTATCGCGCAGGTA
CGCGACGCGCGACGCAACGGCACAAGACCCGTGGGTGTCAGGCGGTGAAG
CGGGTAGGGAGCAGCAGTACCCCTATGCCGAAGAGGATGCATACGACTAC
CCATCGGCGCCGCCTCCGCCGCCGCCGCCGCCGGGGAGGCCGGGGAGGCA
ACAAGAATGGGCCGGGAATGCGGGGATACCCTCGGGGGGCAGAATCAGTA
GCAGCAGGTCGAAAGCCAGACGACGGGGGAAGAAGCGCGGGCGGCCGAGC
GTTGGGGGCGGTGTAGGCGGAGGGGGCAGGCCTGGGGAGGACAGTTTTGA
TGAGGTACGGAATGCGCCGGCTACCGGTTTGTGTCGGACGCCATTCCAGC
AGGCTCATGTGCTGAGCAGAATGTTTGCCGGTCACGAACGCTTGTCCATG
ATATTCTTCATCGTGGCCTTTTTGCACTTTGTCTGCGTATCGTTTGGCTT
CGCTCGGATCTTGGTTCTGTCGCATGCGACACGTGGTACACTTATCCTGT
GGCATGCGCAGATTTTGGGTCCTGGGTGTCCTCGGGGTTTCCTCTTTTTT
CTCGGGCCGTGGTCCGTAGCTTTGGTGCCTGTTCATGTTGAGTCATGAGC
CTTCTCCGTTTACGTTTTGTGGCGTTTTTTGTCTCGTGCAGCAGTCCAAC
TCAGCCGGTCTTCCTCGTCTCCAAAGCCGTGCACGAGTGTTTTGTCTGTT
CTGAAAATGACCGATTGTACAAGCCACTGCACGGTGCGCCGGAAACGCTC
TGCGGTTGGACCTCCACCCTCTCCGCAATTTGAGCGTCAACATTTGTTCG
AACGACTTCCTCAAAGCTACAATCGAATGTGAATGTTGAGAGTGTCGATT
CGTACGCAACGCTTGCCCGCCTTCGTCCCGTGGCCCACCACCGTTCCATC
ATTTTCCGTCGCGAGCGCCTCATGCTGTAGCTCTCGTCCGTTTTGGGTTT
TGTGCTCTTCCCCGGAGGAAGAACGATACTGTCCCGATTGCTTTCAGAGC
GATGACAAGAAAATACCACTGCATCCTATCTGCTCTGATTTGCTTCGCGG
GTCTCCCGGCGACACCTCGCTTCGCGTTGTTCAGGAAGGAGGGGTTGGGG
AGGTTGACCTTGTCCAGGAATACATGCAGTCTTTCAAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig21:849422..851859-

>mRNA_P-fluviatile_contig21.4556.1 ID=mRNA_P-fluviatile_contig21.4556.1|Name=mRNA_P-fluviatile_contig21.4556.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1566bp|location=Sequence derived from alignment at P-fluviatile_contig21:849422..851859- (Porterinema fluviatile SAG_2381)
ATGGCACTCAACTCCCCTAGAATGCGTGCCACGCCGCGACCCTGCGGCAT
CACCACGTTCTCTCTTGTTCTCGCATCAGCGTGCTTCCTGGTGTCCGCCG
AGCAGCCGTCATGGGGATGGAGCAACAAACCGCCACCACACTCAAAACAG
CCTCGACAACCGACGGATGCGGGCGACCCTTGATGGCACTCAACTCCCCT
AGAATGCGTGCCACGCCGCGACCCTGCGGCATCACCACGTTCTCTCTTGT
TCTCGCATCAGCGTGCTTCCTGGTGTCCGCCGAGCAGCCGTCATGGGGAT
GGAGCAACAAACCGCCACCACACTCAAAACAGCCTCGACAACCGACGGAT
GCGGGCGACCCTTGGTACGCGACGCGCGACGCAACGGCACAAGACCCGTG
GGTGTCAGGCGGTGAAGCGGGTAGGGAGCAGCAGTACCCCTATGCCGAAG
AGGATGCATACGACTACCCATCGGCGCCGCCTCCGCCGCCGCCGCCGCCG
GGGAGGCCGGGGAGGCAACAAGAATGGGCCGGGAATGCGGGGATACCCTC
GGGGGGCAGAATCAGTAGCAGCAGGTCGAAAGCCAGACGACGGGGGAAGA
AGCGCGGGCGGCCGAGCGTTGGGGGCGGTGTAGGCGGAGGGGGCAGGCCT
GGGGAGGACAGTTTTGATGAGGTACGGAATGCGCCGGCTACCGGTTTGTG
TCGGACGCCATTCCAGCAGGCTCATGTGCTGAGCAGAATGTTTGCCGGTC
ACGAACGCTTGTCCATGATATTCTTCATCGTGGCCTTTTTGCACTTTGTC
TGCGTATCGTTTGGCTTCGCTCGGATCTTGGTTCTGTCGCATGCGACACG
TGGTACACTTATCCTGTGGCATGCGCAGATTTTGGGTCCTGGGTGTCCTC
GGGGTTTCCTCTTTTTTCTCGGGCCGTGGTCCGTAGCTTTGGTGCCTGTT
CATGTTGAGTCATGAGTACGCGACGCGCGACGCAACGGCACAAGACCCGT
GGGTGTCAGGCGGTGAAGCGGGTAGGGAGCAGCAGTACCCCTATGCCGAA
GAGGATGCATACGACTACCCATCGGCGCCGCCTCCGCCGCCGCCGCCGCC
GGGGAGGCCGGGGAGGCAACAAGAATGGGCCGGGAATGCGGGGATACCCT
CGGGGGGCAGAATCAGTAGCAGCAGGTCGAAAGCCAGACGACGGGGGAAG
AAGCGCGGGCGGCCGAGCGTTGGGGGCGGTGTAGGCGGAGGGGGCAGGCC
TGGGGAGGACAGTTTTGATGAGGTACGGAATGCGCCGGCTACCGGTTTGT
GTCGGACGCCATTCCAGCAGGCTCATGTGCTGAGCAGAATGTTTGCCGGT
CACGAACGCTTGTCCATGATATTCTTCATCGTGGCCTTTTTGCACTTTGT
CTGCGTATCGTTTGGCTTCGCTCGGATCTTGGTTCTGTCGCATGCGACAC
GTGGTACACTTATCCTGTGGCATGCGCAGATTTTGGGTCCTGGGTGTCCT
CGGGGTTTCCTCTTTTTTCTCGGGCCGTGGTCCGTAGCTTTGGTGCCTGT
TCATGTTGAGTCATGA
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