mRNA_P-fluviatile_contig21.4518.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig21.4518.1
Unique NamemRNA_P-fluviatile_contig21.4518.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig21.4518.1 vs. uniprot
Match: D7G4P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P9_ECTSI)

HSP 1 Score: 261 bits (667), Expect = 1.820e-87
Identity = 134/154 (87.01%), Postives = 143/154 (92.86%), Query Frame = 1 
Query:    1 FMQELSRHFTLRVLLCHVDVDDSETPLLEINKMAVLNDFTLVLAWSLQEAARYLETYKAYEQKSAESIQEKVDDDYLAKLQDCFAVVRSVNRSDVLTLASNFGCLKAVCDASAGELAVCPGLGDKKVARLHEALHEPLVP--SRRRLKRNRTDG 456
            FMQELS HFTLRVLLCHVDVDDSETPLLEINKMAV NDFTLVLAWSLQEAARYLETYKAYE KSA+SIQEKVDDD+L KLQDCF VVRSVN+SDVLTLASNFG LKAVCDA+AGEL++CPGLG+KKVAR+HEALHEPLV   S  RLKRNRT+G
Sbjct:    9 FMQELSGHFTLRVLLCHVDVDDSETPLLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVARIHEALHEPLVRKHSSSRLKRNRTEG 162
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BLAST of mRNA_P-fluviatile_contig21.4518.1 vs. uniprot
Match: A0A6H5L7W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W2_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 2.300e-81
Identity = 128/152 (84.21%), Postives = 141/152 (92.76%), Query Frame = 1 
Query:    4 MQELSRHFTLRVLLCHVDVDDSETPLLEINKMAVLNDFTLVLAWSLQEAARYLETYKAYEQKSAESIQEKVDDDYLAKLQDCFAVVRSVNRSDVLTLASNFGCLKAVCDASAGELAVCPGLGDKKVARLHEALHEPLVP--SRRRLKRNRTD 453
            ++ELS HFTLRVLLCHVDVDDSETPLLEINKMAV NDFTLVLAWSLQEAARYLETYKAYE KSA+SIQEKVDDD+L KLQDCF VVRSVN+SDVLTLASNFG LKAVCDA+AGEL++CPGLG+KKV+R+HEALHEPLV   S  RL+RNRT+
Sbjct:  138 IKELSGHFTLRVLLCHVDVDDSETPLLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVSRIHEALHEPLVRKHSSSRLERNRTE 289
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BLAST of mRNA_P-fluviatile_contig21.4518.1 vs. uniprot
Match: A0A835ZCX2_9STRA (Restriction endonuclease type II-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCX2_9STRA)

HSP 1 Score: 164 bits (416), Expect = 3.500e-48
Identity = 84/141 (59.57%), Postives = 105/141 (74.47%), Query Frame = 1 
Query:    4 MQELSRHFTLRVLLCHVDVDDSETPLLEINKMAVLNDFTLVLAWSLQEAARYLETYKAYEQKSAESIQEKVDDDYLAKLQDCFAVVRSVNRSDVLTLASNFGCLKAVCDASAGELAVCPGLGDKKVARLHEALHEPLVPSR 426
            ++EL   F LR+LL  VD DD+   LLE+NKMAV  +FTL+LAWS  EAARYLET+KA+E K   SIQEKV+ DYLAK QD    V +VNR+DV+TL S FG L+ +C+AS  E+A+CPGLGDKKV  LH+ALH+P   +R
Sbjct:   49 IEELRTSFRLRLLLVLVDQDDNVNLLLELNKMAVARNFTLLLAWSWPEAARYLETFKAFENKPPTSIQEKVNSDYLAKAQDALCTVHAVNRTDVVTLLSTFGSLQGLCEASMEEMALCPGLGDKKVVALHDALHQPFFSAR 189
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BLAST of mRNA_P-fluviatile_contig21.4518.1 vs. uniprot
Match: A0A7S3GYK9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GYK9_9STRA)

HSP 1 Score: 155 bits (391), Expect = 8.340e-45
Identity = 82/151 (54.30%), Postives = 103/151 (68.21%), Query Frame = 1 
Query:    4 MQELSRHFTLRVLLCHVDVDDSETPLLEINKMAVLNDFTLVLAWSLQEAARYLETYKAYEQKSAESIQEKVDDDYLAKLQDCFAVVRSVNRSDVLTLASNFGCLKAVCDASAGELAVCPGLGDKKVARLHEALHEPLVPSRRRLKRNRTDG 456
            +QE+ R+F LR+LL  VD + +   L E+NK+A   DFTLVLAWS  E ARYLET+KAYE KSA +IQEKV+ ++L KL      VRSVN++DV+TL   FG    +C AS  EL +CPG+GDKKV RLH ALHEP +P   R K  R + 
Sbjct:   48 IQEVGRNFRLRILLVFVDDESNLATLQELNKIAFACDFTLVLAWSNAECARYLETFKAYEGKSATAIQEKVETEFLPKLTSVLTNVRSVNKTDVITLMDVFGSFGGICRASEQELVLCPGIGDKKVKRLHRALHEPFLPPESRAKVARVEN 198
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BLAST of mRNA_P-fluviatile_contig21.4518.1 vs. uniprot
Match: D8TDH1_SELML (Uncharacterized protein (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8TDH1_SELML)

HSP 1 Score: 150 bits (380), Expect = 3.420e-43
Identity = 73/145 (50.34%), Postives = 106/145 (73.10%), Query Frame = 1 
Query:    4 MQELSRHFTLRVLLCHVDVDDSETPLLEINKMAVLNDFTLVLAWSLQEAARYLETYKAYEQKSAESIQEKVDDDYLAKLQDCFAVVRSVNRSDVLTLASNFGCLKAVCDASAGELAVCPGLGDKKVARLHEALHEPLVPSRRRLK 438
            ++EL ++F LRV+LC+VDV+D   PL E+ K A+L+D +L+ AWSL+E ARYLET K YE K A++IQE+ D DYL++L      VR +N++DV+TL S FG + +V  AS  +LA CPG+G++KV RLH+A HEP   + ++L+
Sbjct:   51 IRELQKNFRLRVVLCYVDVEDVIKPLHEVTKTALLHDCSLLCAWSLEECARYLETIKMYENKPADNIQERTDQDYLSRLTSALTSVRHINKTDVVTLGSTFGSMASVMSASMEDLARCPGIGERKVKRLHDAFHEPFRRTSKQLR 195
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BLAST of mRNA_P-fluviatile_contig21.4518.1 vs. uniprot
Match: A0A5C7I906_9ROSI (Uncharacterized protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7I906_9ROSI)

HSP 1 Score: 155 bits (393), Expect = 3.910e-43
Identity = 75/137 (54.74%), Postives = 100/137 (72.99%), Query Frame = 1 
Query:    4 MQELSRHFTLRVLLCHVDVDDSETPLLEINKMAVLNDFTLVLAWSLQEAARYLETYKAYEQKSAESIQEKVDDDYLAKLQDCFAVVRSVNRSDVLTLASNFGCLKAVCDASAGELAVCPGLGDKKVARLHEALHEPL 414
            ++EL ++F LRV+LCH+DVDD   PLLE+ K A+L+D TL+ AWSL+E  RYLET K YE K A+ IQ ++D DYL++L      VRSVN++DV+TL S FG L  + DAS  +LA CPG+G++KV RLH+  HEP 
Sbjct:  159 IRELQKNFKLRVVLCHIDVDDVVKPLLEVTKTAMLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDSDYLSRLTHSLTTVRSVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLHDTFHEPF 295
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BLAST of mRNA_P-fluviatile_contig21.4518.1 vs. uniprot
Match: S8C4X0_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8C4X0_9LAMI)

HSP 1 Score: 152 bits (385), Expect = 5.230e-43
Identity = 75/137 (54.74%), Postives = 101/137 (73.72%), Query Frame = 1 
Query:    4 MQELSRHFTLRVLLCHVDVDDSETPLLEINKMAVLNDFTLVLAWSLQEAARYLETYKAYEQKSAESIQEKVDDDYLAKLQDCFAVVRSVNRSDVLTLASNFGCLKAVCDASAGELAVCPGLGDKKVARLHEALHEPL 414
            ++EL ++F LRV+LCHVDV+D+  PLLE+ K A+L+D TL+ AWSL+E  RYLET K YE KSAE IQ ++D DYL++L      VR VN++DV+TL S FG L  + DAS  +LA CPG+G++KV RL++  HEP 
Sbjct:  145 IRELQKNFKLRVVLCHVDVEDAVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSAELIQGQMDMDYLSRLNHALTSVRHVNKTDVVTLGSTFGSLGHIMDASMEDLARCPGIGERKVKRLYDCFHEPF 281
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BLAST of mRNA_P-fluviatile_contig21.4518.1 vs. uniprot
Match: A0A022QX06_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QX06_ERYGU)

HSP 1 Score: 155 bits (391), Expect = 5.890e-43
Identity = 79/154 (51.30%), Postives = 108/154 (70.13%), Query Frame = 1 
Query:    4 MQELSRHFTLRVLLCHVDVDDSETPLLEINKMAVLNDFTLVLAWSLQEAARYLETYKAYEQKSAESIQEKVDDDYLAKLQDCFAVVRSVNRSDVLTLASNFGCLKAVCDASAGELAVCPGLGDKKVARLHEALHEP---LVPSRRRLKRNRTDG 456
            ++EL ++F LRV+LCHVDV+D   PLLE+ K A+L+D TL+ AWSL+E  RYLET K YE KSAE IQ ++D DYL++L +    VR VN++DV+TL S FG L  + DAS  +LA CPG+G++KV RL++  HEP   +VP+   +  N  D 
Sbjct:  157 IRELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSAELIQGQMDMDYLSRLNNALTSVRHVNKTDVVTLGSTFGSLSNIMDASVDDLARCPGIGERKVKRLYDTFHEPFKRVVPNHTPIAENPIDN 310
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BLAST of mRNA_P-fluviatile_contig21.4518.1 vs. uniprot
Match: J3N456_ORYBR (HHH_2 domain-containing protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3N456_ORYBR)

HSP 1 Score: 154 bits (390), Expect = 8.640e-43
Identity = 73/137 (53.28%), Postives = 101/137 (73.72%), Query Frame = 1 
Query:    4 MQELSRHFTLRVLLCHVDVDDSETPLLEINKMAVLNDFTLVLAWSLQEAARYLETYKAYEQKSAESIQEKVDDDYLAKLQDCFAVVRSVNRSDVLTLASNFGCLKAVCDASAGELAVCPGLGDKKVARLHEALHEPL 414
            ++EL ++F LRV+LCH+DV+D   PL E+ + A+L+D TL+  WSL+E  RYLET K YE KSA+SI+E +D+DYL++L      +R VN++DV+TL SNFG L  V +AS  ELA CPG+G++KV RLH+  HEP 
Sbjct:  157 IRELQKNFKLRVILCHIDVEDVVKPLHEVTRTAILHDCTLLCGWSLEECGRYLETIKVYENKSADSIREHMDNDYLSRLTHALTSIRHVNKTDVVTLGSNFGSLSQVMNASMEELARCPGIGERKVKRLHDTFHEPF 293
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BLAST of mRNA_P-fluviatile_contig21.4518.1 vs. uniprot
Match: A0A5D2MNV3_GOSTO (Uncharacterized protein n=3 Tax=Gossypium TaxID=3633 RepID=A0A5D2MNV3_GOSTO)

HSP 1 Score: 152 bits (385), Expect = 9.080e-43
Identity = 73/137 (53.28%), Postives = 99/137 (72.26%), Query Frame = 1 
Query:    4 MQELSRHFTLRVLLCHVDVDDSETPLLEINKMAVLNDFTLVLAWSLQEAARYLETYKAYEQKSAESIQEKVDDDYLAKLQDCFAVVRSVNRSDVLTLASNFGCLKAVCDASAGELAVCPGLGDKKVARLHEALHEPL 414
            ++EL ++F LRV+LCHVDV+D   PLLE+ K A+L+D TL+  WSL+E  RYLET K YE K A+ IQ ++D DYL++L      VR VN++DV+TL S FG L ++ DAS  +LA CPG+G++KV RLH+  HEP 
Sbjct:   77 IRELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADLIQGQMDTDYLSRLNHALTTVRRVNKTDVVTLGSTFGSLSSIMDASLEDLARCPGIGERKVKRLHDTFHEPF 213
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig21.4518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4P9_ECTSI1.820e-8787.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7W2_9PHAE2.300e-8184.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZCX2_9STRA3.500e-4859.57Restriction endonuclease type II-like protein n=1 ... [more]
A0A7S3GYK9_9STRA8.340e-4554.30Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
D8TDH1_SELML3.420e-4350.34Uncharacterized protein (Fragment) n=4 Tax=Selagin... [more]
A0A5C7I906_9ROSI3.910e-4354.74Uncharacterized protein n=1 Tax=Acer yangbiense Ta... [more]
S8C4X0_9LAMI5.230e-4354.74Uncharacterized protein (Fragment) n=1 Tax=Genlise... [more]
A0A022QX06_ERYGU5.890e-4351.30Uncharacterized protein n=1 Tax=Erythranthe guttat... [more]
J3N456_ORYBR8.640e-4353.28HHH_2 domain-containing protein n=1 Tax=Oryza brac... [more]
A0A5D2MNV3_GOSTO9.080e-4353.28Uncharacterized protein n=3 Tax=Gossypium TaxID=36... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig21contigP-fluviatile_contig21:553728..554692 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score261.2
Seed ortholog evalue3.1e-67
Seed eggNOG ortholog2880.D7G4P9
Preferred nameERCC1
KEGG koko:K01230,ko:K03514,ko:K10849,ko:K10898,ko:K14850
KEGG ReactionR05982,R06722
KEGG Pathwayko00510,ko00513,ko01100,ko01524,ko03018,ko03420,ko03460,ko04141,map00510,map00513,map01100,map01524,map03018,map03420,map03460,map04141
KEGG ModuleM00073,M00074,M00393,M00413
GOsGO:0000003,GO:0000014,GO:0000109,GO:0000110,GO:0000228,GO:0000280,GO:0000428,GO:0000710,GO:0000712,GO:0000720,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000726,GO:0000733,GO:0000735,GO:0000736,GO:0000781,GO:0000784,GO:0001085,GO:0001091,GO:0001094,GO:0001098,GO:0001099,GO:0001302,GO:0001325,GO:0001775,GO:0002200,GO:0002204,GO:0002208,GO:0002250,GO:0002252,GO:0002263,GO:0002285,GO:0002312,GO:0002366,GO:0002376,GO:0002377,GO:0002381,GO:0002440,GO:0002443,GO:0002449,GO:0002460,GO:0002520,GO:0002562,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003684,GO:0003697,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006277,GO:0006281,GO:0006283,GO:0006284,GO:0006289,GO:0006290,GO:0006293,GO:0006294,GO:0006295,GO:0006296,GO:0006298,GO:0006302,GO:0006303,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006949,GO:0006950,GO:0006955,GO:0006974,GO:0006979,GO:0006996,GO:0007049,GO:0007059,GO:0007127,GO:0007131,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007530,GO:0007531,GO:0007533,GO:0007534,GO:0007548,GO:0007568,GO:0007569,GO:0008022,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0008406,GO:0008584,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009653,GO:0009791,GO:0009892,GO:0009893,GO:0009987,GO:0010165,GO:0010212,GO:0010213,GO:0010224,GO:0010259,GO:0010332,GO:0010604,GO:0010605,GO:0010638,GO:0010639,GO:0016043,GO:0016064,GO:0016444,GO:0016445,GO:0016447,GO:0016591,GO:0016787,GO:0016788,GO:0016888,GO:0016893,GO:0017108,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019724,GO:0019899,GO:0019904,GO:0019953,GO:0022402,GO:0022412,GO:0022413,GO:0022414,GO:0022607,GO:0030097,GO:0030154,GO:0030880,GO:0031323,GO:0031324,GO:0031325,GO:0031334,GO:0031593,GO:0031974,GO:0031981,GO:0032200,GO:0032204,GO:0032205,GO:0032206,GO:0032392,GO:0032501,GO:0032502,GO:0032504,GO:0032505,GO:0032991,GO:0033043,GO:0033044,GO:0033554,GO:0033683,GO:0034622,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0035166,GO:0035264,GO:0035822,GO:0035825,GO:0035861,GO:0036297,GO:0040007,GO:0042113,GO:0042592,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043240,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0044798,GO:0045002,GO:0045132,GO:0045137,GO:0045165,GO:0045190,GO:0045321,GO:0045934,GO:0045935,GO:0046483,GO:0046546,GO:0046649,GO:0046661,GO:0046982,GO:0046983,GO:0048232,GO:0048256,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048569,GO:0048583,GO:0048585,GO:0048589,GO:0048608,GO:0048609,GO:0048646,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051276,GO:0051304,GO:0051307,GO:0051321,GO:0051704,GO:0051716,GO:0055029,GO:0060249,GO:0060255,GO:0061458,GO:0061695,GO:0061819,GO:0061982,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070522,GO:0070911,GO:0070914,GO:0071103,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071824,GO:0071840,GO:0071897,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090305,GO:0090575,GO:0090656,GO:0090734,GO:0090737,GO:0097159,GO:0098687,GO:0098813,GO:0104004,GO:0140013,GO:0140030,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1903046,GO:1904353,GO:1904354,GO:1904429,GO:1904431,GO:1904505,GO:1904506,GO:1905764,GO:1905765,GO:1990234,GO:1990391,GO:2001020,GO:2001021,GO:2001251,GO:2001252
EggNOG free text desc.meiotic mismatch repair
EggNOG OGsCOG5241@1,KOG2841@2759
EC2.1.1.287,2.7.7.19,3.2.1.113
COG Functional cat.L
CAZyGH47
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko03016,ko03019,ko03400,ko04131
Hectar predicted targeting categoryother localisation
Exons3
Model size459
Cds size456
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig21.4518.1prot_P-fluviatile_contig21.4518.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig21 553731..554692 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815932.2914896-UTR-P-fluviatile_contig21:553727..5537301622815932.2914896-UTR-P-fluviatile_contig21:553727..553730Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 553728..553730 +
1693563771.8389134-UTR-P-fluviatile_contig21:553727..5537301693563771.8389134-UTR-P-fluviatile_contig21:553727..553730Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 553728..553730 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815932.3062072-CDS-P-fluviatile_contig21:553730..5538711622815932.3062072-CDS-P-fluviatile_contig21:553730..553871Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 553731..553871 +
1693563771.8595333-CDS-P-fluviatile_contig21:553730..5538711693563771.8595333-CDS-P-fluviatile_contig21:553730..553871Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 553731..553871 +
1622815932.3174212-CDS-P-fluviatile_contig21:554046..5541151622815932.3174212-CDS-P-fluviatile_contig21:554046..554115Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 554047..554115 +
1693563771.8738124-CDS-P-fluviatile_contig21:554046..5541151693563771.8738124-CDS-P-fluviatile_contig21:554046..554115Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 554047..554115 +
1622815932.3268437-CDS-P-fluviatile_contig21:554446..5546921622815932.3268437-CDS-P-fluviatile_contig21:554446..554692Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 554447..554692 +
1693563771.8903298-CDS-P-fluviatile_contig21:554446..5546921693563771.8903298-CDS-P-fluviatile_contig21:554446..554692Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 554447..554692 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig21.4518.1

>prot_P-fluviatile_contig21.4518.1 ID=prot_P-fluviatile_contig21.4518.1|Name=mRNA_P-fluviatile_contig21.4518.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=152bp
MQELSRHFTLRVLLCHVDVDDSETPLLEINKMAVLNDFTLVLAWSLQEAA
RYLETYKAYEQKSAESIQEKVDDDYLAKLQDCFAVVRSVNRSDVLTLASN
FGCLKAVCDASAGELAVCPGLGDKKVARLHEALHEPLVPSRRRLKRNRTD
G*
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mRNA from alignment at P-fluviatile_contig21:553728..554692+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig21.4518.1 ID=mRNA_P-fluviatile_contig21.4518.1|Name=mRNA_P-fluviatile_contig21.4518.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=965bp|location=Sequence derived from alignment at P-fluviatile_contig21:553728..554692+ (Porterinema fluviatile SAG_2381)
TTCATGCAGGAATTGTCAAGGCATTTCACGTTGCGTGTGCTTCTGTGCCA
CGTGGACGTTGACGACAGCGAGACCCCACTGCTCGAGATAAATAAGATGG
CGGTGTTGAACGACTTCACGCTCGTCCTTGCTTGGAGCCTTCAGGTAAAA
TGACCCTTGTGGCGTAAGCGTATTACCACGTTAAGTTAGTTTGCCGTGAG
AATCATCATCCGTCGCCGGCCTGTCCAAACTTGATGTATAGGTACTGCCT
ACACCACATGAGAAACGACTTCTCATGTACGGACAAATATCCTTAAAAAG
CATGATCCCGTTCCTGCAGGAAGCTGCCAGATATTTGGAGACGTACAAGG
CGTACGAGCAAAAATCTGCAGAGAGCATTCAAGAAAAGGTGGGTCGTGAC
CAGTCAGGCGAAAATGCGCGCACATTTTTTCACAATGCTAGCACTGTATT
CTAACATTCAATCGCGAACGAGGCACGTGAACACCAAATGTGCACATGCT
GCAAAGCAAGCGACCCGTATAAAACGTAAAGTCATGCAGACGTCTTGCCG
CCGCATTCTTTCTCCCTTTTCTCGGCGTGGTCAAATTTTCCAACTCTGAA
GTTCAACAGTAGATAGGTGCAATTTCCCCGAAGTGATCGCGTCTACAGAA
GTTCAACAGGTGGATAGATGCAATTTTCCCGAAGTGATCGCGTTTGCAAC
GAAATACTGGTTTTTCCAGGTGGACGACGACTACCTTGCGAAACTTCAGG
ACTGCTTTGCGGTGGTCAGATCCGTCAACAGGTCCGACGTTCTCACTCTT
GCGTCCAATTTCGGGTGTCTCAAGGCTGTGTGTGATGCATCTGCAGGCGA
ACTAGCAGTTTGCCCAGGTCTCGGAGACAAAAAGGTAGCTAGGTTACACG
AGGCTTTACACGAGCCGTTGGTGCCCTCTCGCCGCCGGCTCAAGCGTAAT
AGGACCGATGGCTAA
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Coding sequence (CDS) from alignment at P-fluviatile_contig21:553728..554692+

>mRNA_P-fluviatile_contig21.4518.1 ID=mRNA_P-fluviatile_contig21.4518.1|Name=mRNA_P-fluviatile_contig21.4518.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=912bp|location=Sequence derived from alignment at P-fluviatile_contig21:553728..554692+ (Porterinema fluviatile SAG_2381)
ATGCAGGAATTGTCAAGGCATTTCACGTTGCGTGTGCTTCTGTGCCACGT
GGACGTTGACGACAGCGAGACCCCACTGCTCGAGATAAATAAGATGGCGG
TGTTGAACGACTTCACGCTCGTCCTTGCTTGGAGCCTTCAGATGCAGGAA
TTGTCAAGGCATTTCACGTTGCGTGTGCTTCTGTGCCACGTGGACGTTGA
CGACAGCGAGACCCCACTGCTCGAGATAAATAAGATGGCGGTGTTGAACG
ACTTCACGCTCGTCCTTGCTTGGAGCCTTCAGGAAGCTGCCAGATATTTG
GAGACGTACAAGGCGTACGAGCAAAAATCTGCAGAGAGCATTCAAGAAAA
GGAAGCTGCCAGATATTTGGAGACGTACAAGGCGTACGAGCAAAAATCTG
CAGAGAGCATTCAAGAAAAGGTGGACGACGACTACCTTGCGAAACTTCAG
GACTGCTTTGCGGTGGTCAGATCCGTCAACAGGTCCGACGTTCTCACTCT
TGCGTCCAATTTCGGGTGTCTCAAGGCTGTGTGTGATGCATCTGCAGGCG
AACTAGCAGTTTGCCCAGGTCTCGGAGACAAAAAGGTAGCTAGGTTACAC
GAGGCTTTACACGAGCCGTTGGTGCCCTCTCGCCGCCGGCTCAAGCGTAA
TAGGACCGATGGCTAAGTGGACGACGACTACCTTGCGAAACTTCAGGACT
GCTTTGCGGTGGTCAGATCCGTCAACAGGTCCGACGTTCTCACTCTTGCG
TCCAATTTCGGGTGTCTCAAGGCTGTGTGTGATGCATCTGCAGGCGAACT
AGCAGTTTGCCCAGGTCTCGGAGACAAAAAGGTAGCTAGGTTACACGAGG
CTTTACACGAGCCGTTGGTGCCCTCTCGCCGCCGGCTCAAGCGTAATAGG
ACCGATGGCTAA
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