mRNA_P-fluviatile_contig21.4472.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig21.4472.1 vs. uniprot
Match: A0A6H5KV31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV31_9PHAE) HSP 1 Score: 400 bits (1028), Expect = 1.200e-132 Identity = 208/328 (63.41%), Postives = 238/328 (72.56%), Query Frame = 2
Query: 647 QERGFNNGMFSCFVGTKDAPEAGSRRRGGAFWSHGTLRKRFSESAFIACMKARIPFVLEGDAPVLSPVGEMMLVASRKGVARLGYIGKKSGRGPLNLKPDLTDKWRTGAVSDEQLRETLNGGTFTIDNTEVDKQTDRTCSATLKNDAVTRMIREKTRMEELCFPRRGN-QRGGSLDR*FSRRRCVGG*RVYVICERRWNDKPACGRAICPRGNREIIRMPAAGIIRNVNHADTQWPAKQAIVVHADDMSRVIETLKIDTGKESTSQYGGKLQTLPEFARLLRGAGIRFVVVNFPARCSHALPAKCAHVFITIGLVESSAWHPVFGQKI 1627
++ G NNG+FSC + AP RR FWS+G RK SE+ FIAC KA+IP VLEGDAP SP+GEMM A+ + VARLGYIGK SGRGPL L PDLTD WRTGAV+D+QLR+TLNGGTFTIDNTE +K DRTC AT++ND VT MIRE TRM ELCFPRRGN QR G L + G + + P P G II MPAAG+IR VNHAD Q PAKQAIVVHADDMSRVIETL+I+TGKES SQYGG +TL EFAR+LR GIRFVV+NFP RCS+ALPA+CAH F+TIGLVESSAWHPV+ Q +
Sbjct: 21 KDEGLNNGLFSCLLRKDTAPREDRSRRPCPFWSNGPERKGLSENVFIACTKAKIPLVLEGDAPPKSPMGEMMQYAADQRVARLGYIGKTSGRGPLALTPDLTDAWRTGAVTDQQLRDTLNGGTFTIDNTEENKSRDRTCYATMENDTVTAMIREGTRMGELCFPRRGNHQRCGRLTGNSADGVAWSGSECMLFAKDGGMTNPHVDVQSVPGGTGTIIHMPAAGVIRRVNHADAQGPAKQAIVVHADDMSRVIETLQINTGKESASQYGGPPRTLTEFARVLRNEGIRFVVINFPVRCSYALPARCAHAFVTIGLVESSAWHPVYKQDM 348
BLAST of mRNA_P-fluviatile_contig21.4472.1 vs. uniprot
Match: D8LP46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP46_ECTSI) HSP 1 Score: 306 bits (784), Expect = 2.020e-91 Identity = 168/274 (61.31%), Postives = 196/274 (71.53%), Query Frame = 2
Query: 800 ARIPFVLEGDAPVLSPVGEMMLVASRKGVARLGYIGKKSGRGPLNLKPDLTDKWRTGAVSDEQLRETLNGGTFTIDNTEVDKQTDRTCSATLKNDAVTRMIREKTRMEELCFPRRGNQ-RGGSLDR*FSRRRCVGG*RVYVICERRWNDKPACGRAICPRGNREIIRMPAAGIIRNVNHADTQWPAKQAIVVHADDMSRVIETLKIDTGKESTSQYGGKLQTLPEFARLLRGAGIRFVVVNFPARCSHALPAKC----AHVFITIGLVESS-AW 1603
A IP VLEGDAP SP+GEMM A+ KGVAR+GYIGK SGRGPL L P LTD WRTGAV+D+QLR+TLNGGTFTIDNTE +K+TD+TC ATL+ND VT MIRE TRM ELCFPRRGN + G+L + G + + P P G II MPAAG+IR VN+ + PAKQAIVVHADDMSRVIETLKI+T KES SQYGG +TLPEFAR+L+ GIRFVV+NFP+RCS+ALPA+ AH GL+ S+ AW
Sbjct: 314 AAIPLVLEGDAPAQSPMGEMMQYAAGKGVARIGYIGKTSGRGPLKLAPGLTDAWRTGAVTDKQLRDTLNGGTFTIDNTEENKRTDKTCYATLENDTVTAMIREGTRMGELCFPRRGNHLQYGTLTGKEADGVAWSGSECMLFAKDGGMTNPHVDVQSVPGGTGRIIHMPAAGVIRRVNYVEENRPAKQAIVVHADDMSRVIETLKINTKKESASQYGGPPRTLPEFARVLKSKGIRFVVMNFPSRCSYALPARPSFMRAHELALRGLLHSNDAW 587
BLAST of mRNA_P-fluviatile_contig21.4472.1 vs. uniprot
Match: D7G2S5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S5_ECTSI) HSP 1 Score: 188 bits (477), Expect = 2.020e-48 Identity = 119/324 (36.73%), Postives = 172/324 (53.09%), Query Frame = 2
Query: 656 GFNNGMFSCFVGTKDAPEAGSRRRGG---AFWSHGTLRKRFSESAFIACMKARIPFVLEGDAPVLSPVGEMMLVASRKGVARLGYIGKKSGRGPLNLKPDLTDKWRTGAVSDEQLRETLNGG-TFTIDNTEVDKQTDRTCSATLKNDAVTRMIREKTRMEELCFPRRGNQRGGSLDR*FS-RRRCVGG*RVYVICERRWNDKPACGRAICPRGNREIIRMPAAGIIRNVNHADTQWPAKQAIVVHADDMSRVIETLKIDTGKESTSQYGGKLQTLPEFARLLRGAGIRFVVVNFPARCSHALPAKCAHVFITIGLVESSAWHPV 1612
GF+NG+F ++ +AP RR AFWS GT R ++E AF AC+KA P + EGD S +G A + + R+G +G ++G + P + W G + ++L++ T+T N E D + D T++ + ++R TRM LC P R RGG L S R + G V R + G E + +PAAG +R+VN + PAK+AI++ A DM RV++ L +D K S+SQY G + L A LR IRFVVV+FP CS+A+PA+CAH+F+T+ LVES AWHP+
Sbjct: 296 GFDNGLFCGYLDMANAPPYVPGRRDDPTVAFWSKGTDRLEYTEHAFKACLKAHFPVIFEGDDTYRSVMGTACKSALARNLTRIGGLGGRNGTSMFGVSPSFVESWNEGVIDGDELKKAFGTNPTWTTQNFEEDDKVDVLSFNTIECVGASDLVRN-TRMGGLCHPDRPPTRGGVLTGTTSVRGKSWSGSEVTAFAMRTGGVTHSHVDPQMVHG--EHLYLPAAGTMRSVNRRGS-GPAKRAILMCAHDMDRVVDLLGLDVNKPSSSQYTGAIVDLEGLATRLRVNSIRFVVVDFPEYCSYAIPARCAHMFVTLRLVESCAWHPI 615
BLAST of mRNA_P-fluviatile_contig21.4472.1 vs. uniprot
Match: D7G7Y6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Y6_ECTSI) HSP 1 Score: 180 bits (456), Expect = 2.360e-47 Identity = 118/326 (36.20%), Postives = 172/326 (52.76%), Query Frame = 2
Query: 662 NNGMFSCFVGTKDAPEAGSRRR---GGAFWSHGTLRKRFSESAFIACMKARIPFVLEGDAPVLSPVGEMMLVASRKGVARLGYIGKKSGRGPLNLKPDLTDKWRTGAVSDEQLRETLNGGT-FTIDNTEVDKQTDRTCSATLKNDAVTRMIREKTRMEELCFPRRGN-----QRGGSLDR*FSRRRCV-GG*RVYVICERRWNDKPACGRAICPRGNREIIRMPAAGIIRNVNHADTQWPAKQAIVVHADDMSRVIETLKIDTGKESTSQYGGKLQTLPEFARLLRGAGIRFVVVNFPARCSHALPAKCAHVFITIGLVESSAWHP 1609
+NG+F F+ +AP RRR G +FWS G R+R S+ F AC+ A P ++EGD S +G + A +++L +G + G +L + D W G V D LR+ G T +TI N E +++ D T++ A T ++R KTRM LC+P + GG L + S + G V RR + A+ N + + +PAAG +R+VN D + PAK+AIVV A DM RV+ K+D K QYGG + L A L+ I FVV++FP CS+A+P KCAH+ +T+ LVE+ AW+P
Sbjct: 68 DNGLFYGFLSRDNAPPYNVRRREDDGDSFWSKGEARRRHSDRVFRACLTAGFPVLIEGDI-TRSVMGAVCKAAVGMHISKLRNLGVRRGTSMFSLSEEFVDCWVEGNVGDNMLRDAFGGKTTWTIQNFEENQRVDACSYQTIECAAATGIVR-KTRMGALCYPDTADTAGTDNTGGELTKPVSIGEVLWAGSEVTAFATRRGSVTHIHVDAL--EVNEKPLFLPAAGAMRSVNRGD-RGPAKRAIVVCAHDMDRVVRLFKLDVRKPPAMQYGGAVSDLRRLAAELKANSIGFVVIDFPEACSYAIPGKCAHMSVTLRLVETCAWNP 388
BLAST of mRNA_P-fluviatile_contig21.4472.1 vs. uniprot
Match: UPI0000161E52 (hypothetical protein n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E52) HSP 1 Score: 171 bits (433), Expect = 1.280e-42 Identity = 86/131 (65.65%), Postives = 100/131 (76.34%), Query Frame = 2
Query: 647 QERGFNNGMFSCFVGTKDAPEAGSRRRGGAFWSHGTLRKRFSESAFIACMKARIPFVLEGDAPVLSPVGEMMLVASRKGVARLGYIGKKSGRGPLNLKPDLTDKWRTGAVSDEQLRETLNGGTFTIDNTEV 1039
++ G NNG+FSC + AP+ RR FWS+G+ RK SE+ IAC KA+IP VLEGDAP SP+GEMM A+ KGVAR+GYIGK SGRGPL L PDLTD WR GAVSD+QLR+TLNGGTFTIDNTEV
Sbjct: 416 KDEGLNNGLFSCLLRKDTAPKEDRSRRPCPFWSNGS-RKELSENVAIACTKAQIPLVLEGDAPEKSPMGEMMKYAAGKGVARIGYIGKTSGRGPLTLTPDLTDAWRIGAVSDKQLRDTLNGGTFTIDNTEV 545 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig21.4472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig21.4472.1 >prot_P-fluviatile_contig21.4472.1 ID=prot_P-fluviatile_contig21.4472.1|Name=mRNA_P-fluviatile_contig21.4472.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=169bp MFSCFVGTKDAPEAGSRRRGGAFWSHGTLRKRFSESAFIACMKARIPFVLback to top mRNA from alignment at P-fluviatile_contig21:232445..234323- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig21.4472.1 ID=mRNA_P-fluviatile_contig21.4472.1|Name=mRNA_P-fluviatile_contig21.4472.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1879bp|location=Sequence derived from alignment at P-fluviatile_contig21:232445..234323- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig21:232445..234323- >mRNA_P-fluviatile_contig21.4472.1 ID=mRNA_P-fluviatile_contig21.4472.1|Name=mRNA_P-fluviatile_contig21.4472.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1014bp|location=Sequence derived from alignment at P-fluviatile_contig21:232445..234323- (Porterinema fluviatile SAG_2381)back to top |