mRNA_P-fluviatile_contig21.4470.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig21.4470.1 vs. uniprot
Match: A0A6H5KUR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR8_9PHAE) HSP 1 Score: 328 bits (841), Expect = 4.690e-92 Identity = 251/467 (53.75%), Postives = 274/467 (58.67%), Query Frame = 2
Query: 497 GAAAVTPGQGTDPEQPVVASGERGTVEVGAREEECAA-LQDGGCIXXXXXXXXXXXXESGTEIGAAISVSTAGGAEGAGGVEMVSSSNPNHL--------DGCCGGIESGGG-DGANHDARTSVSMHVMLEDGAPDLSQELAATKVTDTQPDEAVAAPASAQAVVET-------EREQPVPASEALVAGDVGVQAAGEAGADKAMPTSCGSAGVAQGPGEAPRLQKGRGLHDLLDQIRADEGEEEQGEVVSERLAAXXXXXXXXXXXXXXXXXDEHEVDGTPVPRRSSRVVGISALGKTSVVRLLDRIRADDPSVEILKLNDYSPAD-----------------------------------------------------------------------------HAYLSKECISDGLTKVTQKVIRDNRAKHTRHKSASNVEVIR------WNPINSEGLQAELEAA 1597
GAA VTPGQGTDPEQPV ASGERGTV VGAR EEC A GGCI XXXXXXXXXXXESGT I AA SVS AG A GAGGVEM SSSN N L +G CGGIESGGG DGANHD V + D APDLSQELA T+VT TQPDEA+AAPASAQ VVET ER+QP+PASEALVAG V VQAAGEAGA MPT GS G+AQ GEAPR+QK RG HD+LD+IR D GE EQGE +S+ LA +HE D PVPRRSSRVVG SAL SVVRLL +IR DDP VE+LKL++Y PAD HAYLS+ECI GL K + IR NR KHTRHKSASNV+VIR WNP+ + QAEL+AA
Sbjct: 432 GAAVVTPGQGTDPEQPVPASGERGTV-VGARAEECTAPATGGGCISXXXXXXXXXXXESGTAIDAATSVSAAGTA-GAGGVEMASSSNLNLLATVCLLEENGSCGGIESGGGGDGANHDET------VPIGDCAPDLSQELAVTQVTGTQPDEALAAPASAQVVVETVTPGQDTERQQPLPASEALVAGGVEVQAAGEAGAGDVMPTLSGSVGLAQQTGEAPRVQKSRGSHDVLDRIRVDGGEVEQGEAISDALAVAPGSSSGGSENGGGA---QHEEDAIPVPRRSSRVVGSSALESPSVVRLLAQIRTDDPRVEVLKLHNYIPADVCTPVIDAVLEALMLNNNCQALYIQNVSNGLRDEQLMMLARVLRKGNIWCLNAGENSKIKPSTWCDFVKEIEKTGVTHAYLSEECIPVGLKKAMRTAIRANRVKHTRHKSASNVKVIRQCTNMWWNPVLCKESQAELKAA 887
BLAST of mRNA_P-fluviatile_contig21.4470.1 vs. uniprot
Match: A0A6H5K7R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R7_9PHAE) HSP 1 Score: 312 bits (800), Expect = 8.000e-86 Identity = 257/482 (53.32%), Postives = 275/482 (57.05%), Query Frame = 2
Query: 479 ADSDDDGAAAVTPGQGTDPEQPVVASGERGTVEVGAREEECAALQDGGC-IXXXXXXXXXXXXESGTEIGAAISVSTAGGAEGAGGVEMVSSSNPNHLDGCC--------GGIESGGG-DGANHDARTSVSMHVMLEDGAPDLSQELAATKVTDTQPDEAVAAP-ASAQAVVET-------EREQPVPASEALVAGDVGVQAAGEAGADKAMPTSCGSAGVAQGPGEAPRLQKGRGLHDLLDQIRADEGEEEQGEVVSERLAAXXXXXXXXXXXXXXXXXD---------EHEVDGTPVPRRSSRVVGISALGKTSVVRLLDRIRADDPSVEILKLNDYSPAD----------------------------------------------------------------------------HAYLSKECISDGLTKVTQKVIRDNRAKHTRHKSASNVEVIR------WNPINSEGLQAELEAA 1597
ADSDDDGAA V PGQGTDP QPV ASGERG VE+GAR EEC A GG I XXXXXXESGT AA SVS AG A GAGG+EM SSSN L C GGIESGGG DGANHD V +EDGAPD SQELA T+VT TQPDEAVAA ASAQAVVET EREQP+P EALVAG V VQ GEAGA M TS GS GVAQ GEAPR+Q+ RG HDLLDQIR GE EQGE +S+ LA XXXXXXXXXXXX EHE D VPRRSSRVVG SAL SVV LL +IR DDP VE+LKL++Y PAD HAYLS+ECI GL K + IR NR KHTRHKSASNV+VIR WNPI + LQAEL+AA
Sbjct: 472 ADSDDDGAAVVPPGQGTDPAQPVPASGERGRVEIGARGEECTAPATGGWFISRSGGGXXXXXXESGTAKDAATSVSAAGPAAGAGGLEMASSSNLQLLATVCVRAENESYGGIESGGGGDGANHDET------VPIEDGAPDFSQELAVTQVTGTQPDEAVAAASASAQAVVETATPVQDTEREQPLPPREALVAGGVEVQVVGEAGAGDVMRTSSGSVGVAQQTGEAPRVQESRGSHDLLDQIRVYGGEVEQGEAISDALAVAPDSSXXXXXXXXXXXXXXXXXXXXXXEHEEDDISVPRRSSRVVGSSALESPSVVHLLAQIRTDDPRVEVLKLHNYIPADVSTPVIDAVLEALMLNNCQALYIQNVSNGLRDEQLMMLAKVLRKGNIWCLNAGENSKIKPSTWCDFVKEIDKTGVTHAYLSEECIPIGLKKAMRTAIRANRVKHTRHKSASNVKVIRRCTNMWWNPILCKELQAELKAA 947
BLAST of mRNA_P-fluviatile_contig21.4470.1 vs. uniprot
Match: D8LFH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH6_ECTSI) HSP 1 Score: 238 bits (606), Expect = 2.460e-66 Identity = 194/369 (52.57%), Postives = 209/369 (56.64%), Query Frame = 2
Query: 740 MVSSSNPNHL--------DGCCGGIESGGG-DGANHDARTSVSMHVMLEDGAPDLSQELAATKVTDTQPDEAVAAPASAQAVVETEREQPVPASEALVAGDVGVQAAGEAGADKAMPTSCGSAGVAQGPGEAPRLQKGRGLHDLLDQIRADEGEEEQGEVVSERLAAXXXXXXXXXXXXXXXXXDEHEVDGTP-------------VPRRSSRVVGISALGKTSVVRLLDRIRADDPSVEILKLNDYSPAD-----------------------------------------------------------------------------HAYLSKECISDGLTKVTQKVIRDNRAKHTRHKSASNVEVIR 1549
M SSSN N L +G CGGIESGGG DGAN D V +EDGA DLSQELAAT+VT TQPDE VAAPASAQ +TE EQP PAS+ALVAG V VQAAGEAGAD MPTS GSAGVA PGEA R+Q RG HDLLD+IRADE EEQ VS++L A XXXXXXXXXXXXXXX VPRRS+RV G SAL +TSVVRLLD+IRADDP VEILKL+DY PAD HAYLS+ECI GLT+ QK IR NRAKHTRHKSASNVEVIR
Sbjct: 1 MASSSNLNLLATVCLLEGNGSCGGIESGGGGDGANRDET------VPIEDGALDLSQELAATRVTSTQPDEPVAAPASAQ---DTECEQPSPASDALVAGGVAVQAAGEAGADDVMPTSRGSAGVAIQPGEAQRVQNSRGSHDLLDEIRADEDGEEQERAVSDKLVASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISVPRRSNRVPGSSALERTSVVRLLDQIRADDPRVEILKLHDYLPADVSTPIINAVLKALMCNSNCQALYIQNVSIGFRDEQLRMLAKVLRRGNIWCLNAGENSGITPSAWWWFVEEIKTTSVTHAYLSEECIPCGLTETMQKAIRANRAKHTRHKSASNVEVIR 360
BLAST of mRNA_P-fluviatile_contig21.4470.1 vs. uniprot
Match: A0A6H5JA48_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA48_9PHAE) HSP 1 Score: 215 bits (547), Expect = 2.650e-58 Identity = 170/331 (51.36%), Postives = 183/331 (55.29%), Query Frame = 2
Query: 848 VMLEDGAPDLSQELAATKVTDTQPDEAVAAP-ASAQAVVET-------EREQPVPASEALVAGDVGVQAAGEAGADKAMPTSCGSAGVAQGPGEAPRLQKGRGLHDLLDQIRADEGEEEQGEVVSERLAAXXXXXXXXXXXXXXXXXDE------------HEVDGTPVPRRSSRVVGISALGKTSVVRLLDRIRADDPSVEILKLNDYSPAD-----------------------------------------------------------------------------HAYLSKECISDGLTKVTQKVIRDNRAKHTRHKSASNVEVIR 1549
V + D APDLSQELAAT+VT TQPDEAVAA AS QAVVET E EQP+PASEALVAGDVGVQAAGEAGA M TS GS GVAQ GEAPR+Q+ RG HDLLDQIR GE EQGE VS+ LA XXXXXXXXXXXX HE D PVPRRSSRVVG SAL SVVRLL +IR DDP VE+LKL++Y PAD HAYLS+ECI GL K + IR NR KHTRHKSASNV+VIR
Sbjct: 30 VPIGDDAPDLSQELAATQVTGTQPDEAVAAASASPQAVVETATPGQDTEHEQPLPASEALVAGDVGVQAAGEAGAADVMLTSSGSVGVAQQTGEAPRVQESRGSHDLLDQIRVYGGEVEQGEAVSDALAVAPGSSXXXXXXXXXXXXXXXXXXXXXXXXXXHEEDAIPVPRRSSRVVGSSALEPPSVVRLLAQIRTDDPEVEVLKLHNYIPADVSTPVIDAVLEALMLNNNCQALYIQNVSNGLRDEQIMMLAKVLRRGNIWCLNAGENSKIKPSTWRDFVKEIDKTGVTHAYLSEECIPIGLKKAMRTAIRANRVKHTRHKSASNVKVIR 360
BLAST of mRNA_P-fluviatile_contig21.4470.1 vs. uniprot
Match: A0A6H5JNB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB8_9PHAE) HSP 1 Score: 214 bits (545), Expect = 2.420e-53 Identity = 209/460 (45.43%), Postives = 227/460 (49.35%), Query Frame = 2
Query: 497 GAAAVTPGQGTDPEQPVVASGERGTVEVGAREEECAA-LQDGGCIXXXXXXXXXXXXESGTEIGAAISVSTAGGAEGAGGVEMVSSSNPNHL--------DGCCGGIESG-GGDGANHDARTSVSMHVMLEDGAPDLSQELAATKVTDTQPDEAVAAPASAQAVVETEREQPVPASEALVAGDVGVQAAGEAGADKAMPTSCGSAGVAQGPGEAPRLQKGRGLHDLLDQIRADEGEEEQGEVVSERLAAXXXXXXXXXXXXXXXXXDEHEVDGTPVPRRSSRVVGISALGKTSVVRLLDRIRADDPSVEILKLNDYSPAD-----------------------------------------------------------------------------HAYLSKECISDGLTKVTQKVIRDNRAKHTRHKSASNVEVIR------WNPINSEGLQAELEAA 1597
GAA VTPGQG DPEQ V+ASGERGTVE GAREEEC A GGCI XXXXXXXXXXESGT I AA SVS A GGVEM SSSN L +G CGGIESG GGDGA H+ V +EDGAPDLSQEL AT+V +QP +V GDV VQAAGEAG MPTS SA VAQ PG + XXXXXXXXXXXXXX EHE D PVPRRS RVVG SAL SVVRLLD+IRADDP V++LKL+DY PAD HAYLS+ + GL QK IR NR KH RH SASNV+VI+ WNPI S+ LQAEL+AA
Sbjct: 352 GAAVVTPGQGADPEQSVLASGERGTVEDGAREEECTAPATGGGCISSXXXXXXXXXXESGTAIDAATSVSAAXXXX-XGGVEMASSSNLELLATVCLLEENGSCGGIESGDGGDGARHEET------VPIEDGAPDLSQELVATQVNGSQP---------------------------VVEGDVTVQAAGEAGTVDMMPTSVESADVAQWPGSSSSXXXXXXXXXXX-------------------------XXXXXXXXXXXXXXXEHEEDAIPVPRRSGRVVGFSALESPSVVRLLDQIRADDPRVKVLKLHDYIPADVGTIIIDAVLEALMINSNCQALYIQNVSNGFRDEQLMRLAEVLRRGLIWCLNAGENSEIKASTWWNFVEEIQNTNVTHAYLSEGSVPSGLKNAMQKAIRRNRLKHDRHLSASNVDVIQRCTHMWWNPIRSKKLQAELKAA 752
BLAST of mRNA_P-fluviatile_contig21.4470.1 vs. uniprot
Match: A0A6H5KIP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIP7_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 4.210e-9 Identity = 38/61 (62.30%), Postives = 45/61 (73.77%), Query Frame = 2
Query: 1427 HAYLSKECISDGLTKVTQKVIRDNRAKHTRHKSASNVEVIR------WNPINSEGLQAELE 1591
HAYLS+ I+ L K +K IRDNR KHTRHKSA+N+EVIR WNPINS+ LQAEL+
Sbjct: 778 HAYLSEHVITAELKKAMRKAIRDNRVKHTRHKSAANLEVIRRCTNMWWNPINSKFLQAELK 838
BLAST of mRNA_P-fluviatile_contig21.4470.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 1.370e-7 Identity = 43/55 (78.18%), Postives = 44/55 (80.00%), Query Frame = 2
Query: 869 PDLSQELAATKVTDTQPDEAVAAPASAQAVV-------ETEREQPVPASEALVAG 1012
PDLSQELAAT+VT TQPDEAVAAPASAQAVV ETE EQPVPA EALV G
Sbjct: 2004 PDLSQELAATQVTGTQPDEAVAAPASAQAVVKAVTPVTETEHEQPVPAREALVKG 2058
BLAST of mRNA_P-fluviatile_contig21.4470.1 vs. uniprot
Match: D7FZY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY3_ECTSI) HSP 1 Score: 60.1 bits (144), Expect = 1.690e-5 Identity = 32/57 (56.14%), Postives = 38/57 (66.67%), Query Frame = 2
Query: 1427 HAYLSKECISDGLTKVTQKVIRDNRAKHTRHKSASNVEVIR-----WNPINSEGLQA 1582
HAYLS+ I+ L K +K IRDNR KHTRHKSASN+EVIR W +GLQ+
Sbjct: 406 HAYLSEHVITAELKKAMRKAIRDNRVKHTRHKSASNLEVIRRCTNMWRHKTRDGLQS 462 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig21.4470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig21.4470.1 >prot_P-fluviatile_contig21.4470.1 ID=prot_P-fluviatile_contig21.4470.1|Name=mRNA_P-fluviatile_contig21.4470.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=657bp MHVLPTPRGRSSISGQPQKRCFQLCPNIAPVAPQGVGGKGAGGGRGRAKAback to top mRNA from alignment at P-fluviatile_contig21:192422..199719- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig21.4470.1 ID=mRNA_P-fluviatile_contig21.4470.1|Name=mRNA_P-fluviatile_contig21.4470.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7298bp|location=Sequence derived from alignment at P-fluviatile_contig21:192422..199719- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig21:192422..199719- >mRNA_P-fluviatile_contig21.4470.1 ID=mRNA_P-fluviatile_contig21.4470.1|Name=mRNA_P-fluviatile_contig21.4470.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3942bp|location=Sequence derived from alignment at P-fluviatile_contig21:192422..199719- (Porterinema fluviatile SAG_2381)back to top |