mRNA_P-fluviatile_contig20.4441.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig20.4441.1 vs. uniprot
Match: D8LJE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE2_ECTSI) HSP 1 Score: 526 bits (1356), Expect = 7.900e-168 Identity = 431/919 (46.90%), Postives = 487/919 (52.99%), Query Frame = 3
Query: 621 GHQAQVRCLSIDSQGQLLVSGDESGNICVRVLHPMNLGHPKSRPSGGRGRQGSGDTAGGFRGGDPGVAWISEVGGSGXXXXXXXXXXXXXXXXXGVANFVEGAHDREVLAISHVEGSLRLLGEGGEGECXXXXXXEDGGLKNGTGCTLLFVSGGKGGVVRLWKAMCLQVAR---GQNTGGANPVVHVEPVQDMLVGGFQVSCLAASLSMRTPLVLAGTKEGTVFAFRL-QEQGHHDSPQRIDEDN-----------GERGRACGAGGIGIYSREDKADLPGVRKAGQGAVHMKFEHTQESIEAVCCSREQELIAAADADGIVRTYRPV-PLG-----NDSPGTAVSAAASESGGDRQHATTRPFQLVVECRLGARPVLCDFALGTGRGIGRRSDGGDPGEERDDPHRDENKDGGXXXXEGEVLRTCTTVGQLRVWPTASLPTRPMTQSRTPPMMTTTTTAPTMPMPLGSNGEALEPLVPNPSNAGTASHRGGGGKDGKWQPE------------AGMRDQENRDPSLPNRDRDRHLDRHEDQDPFARWAAMATANDDLQGRRAGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEGAGKDEEEEELTARGDPPLPKARPAVPRRVSFAAADEVFNLQDPYYSSNSIQRGWDSALERKEEGA-----------DESGEAPRXXXXXXXXXXVRESMSSRPRRLRQAWNAASASRSSSPRGSYSRRSSSMGQQATPGEEYSDDSGAFVAPSRLQEASMWSTAVEQAELERRMREASMLLECGMEEFDASVVPESRAPVYRAAAAAAVNIHPKAKTFQGLVPVSLDAPPXXXXXXXXRDRLAGKSQLSRAQERRMTEEDLAYDGMEPDCSAVAGFGS---GRGMWPREEFEWYGGRSLFAELEASYSVASDRVWSLGRRL 3236
G + +V CLSID +G+LLV+GDESG IC R+LH G R GD S V G XXXXXXXXX VA V AH EVLAISHVEG G LFVSGGKGGVVRLWKA CL+ +R GG + VHVE ++DMLVGGFQVSCLAASLS P+VLAGT EGTVFAF L Q Q D R ED+ G+RG G+ G R D A V + GAV MKFEHT E +E VCCS+EQELIAA DA GIVRTYRP+ P G N S G +AAA+ A R F+LVVECRLGARPV C+F G RG+ GGD R G EGEVLRTCT G LR+WPTASLPTRPM R PP ++APT L EAL PL P+PSNAGT A +QENRDPS DPF+RW A+ D +GR G G G+ EEEE +ARG+PPLPKARPA PRRVSFA AD+V+ L+DPYY S DE G APRXXXX + PRRLRQ W ++ SSPRGS +RR SS + SDD+ FVAPSR+QE S+WSTA EQAELERRM E EFD S VPE APVYRAAAAAAVNIHP AKTF+GLVPVSLDAPP + + KS LS+ QE+R+TEEDLA+DGMEPDCSA+ GFGS GR MWP EE EWYGGR +FAEL+ S S ASDRVWSLGRRL
Sbjct: 12 GRRQKVGCLSIDRRGELLVTGDESGAICARLLHHS-----------------------GNRSGDGTACGSSSVEGX---------XXXXXXXXXXVAEVVREAHSGEVLAISHVEGGA------------------------GDDDPALFVSGGKGGVVRLWKAACLERSRETVAAGGGGGDLEVHVELLKDMLVGGFQVSCLAASLSPTVPIVLAGTAEGTVFAFHLLQAQEPSDRRDREAEDDRPTVGRPTVGYGDRGSRGGSVASG-RERPDNA----VGRTELGAVLMKFEHTSEPVERVCCSQEQELIAATDAAGIVRTYRPLLPRGGSTDNNPSDGAPPTAAAA--------AEARRFELVVECRLGARPVSCEFGSGP-RGV---ESGGD---------RRRGVGG-----EGEVLRTCTARGVLRLWPTASLPTRPM---RPPP-----SSAPTR---LPDYHEALAPL-PHPSNAGTDXXXXXXXXXXXXXXXXXXXXXXXXXAMAAGTEQENRDPS----------------DPFSRWTAI-----DAKGRGPGLVGV-----------------------------GGGEGGEEEEPSARGEPPLPKARPAAPRRVSFAPADQVYKLEDPYYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELG-APRXXXXAPTPMRA-SGATGPPRRLRQTWGTSA----SSPRGSRARRGSST--------DASDDAS-FVAPSRMQEPSLWSTAAEQAELERRMTE----------EFDGSGVPEPVAPVYRAAAAAAVNIHPLAKTFEGLVPVSLDAPPPRPKR---KGKQVSKSHLSKVQEQRITEEDLAFDGMEPDCSAIIGFGSSTAGR-MWPHEELEWYGGRKMFAELDRS-STASDRVWSLGRRL 751
BLAST of mRNA_P-fluviatile_contig20.4441.1 vs. uniprot
Match: A0A6H5L2I0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2I0_9PHAE) HSP 1 Score: 475 bits (1223), Expect = 1.100e-148 Identity = 393/896 (43.86%), Postives = 451/896 (50.33%), Query Frame = 3
Query: 636 VRCLSIDSQGQLLVSGDESGNICVRVLHPMNLGHPKSRPSGGRGRQGSGDTAGGFRGGDPGVAWISEVGGSGXXXXXXXXXXXXXXXXXGVANFVEGAHDREVLAISHVEGSLRLLGEGGEGECXXXXXXEDGGLKNGTGCTLLFVSGGKGGVVRLWKAMCLQVAR---GQNTGGANPVVHVEPVQDMLVGGFQVSCLAASLSMRTPLVLAGTKEGTVFAFRLQEQGHHDSPQRIDEDNGER-----GRACGAGGIGIYSREDKADLPGVRKAGQGAVHMKFEHTQESIEAVCCSREQELIAAADADGIVRTYRPV----PLGNDSPGTAV---SAAASESGGDRQHATTRPFQLVVECRLGARPVLCDFALGTGRGIGRRSDGGDPGEERDDPHRDENKDGGXXXXEGEVLRTCTTVGQLRVWPTASLPTRPMTQSRTPPMMTTTTTAPTMPMPLGSNGEALEPLVPNPSNAGTASHRGGGGKDGKWQPEAGMR-------DQENRDPSLPNRDRDRHLDRHEDQDPFARWAAMATANDDLQGRRAGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEGAGKDEEEEELTARGDPPLPKARPAVPRRVSFAAADEVFNLQDPYYSSNSIQRGWDSALERKEEGADESGEAPRXXXXXXXXXXVRESMSS----RPRRLRQAWNAASASRSSSPRGSYSRRSSSMGQQATPGEEYSDDSGAFVAPSRLQEASMWSTAVEQAELERRMREASMLLECGMEEFDASVVPESRAPVYRAAAAAAVNIHPKAKTFQGLVPVSLDAPPXXXXXXXXRDRLAGKSQLSRAQERRMTEEDLAYDGMEPDCSAVAGFGS---GRGMWPREEFEWYGGRSLFAELEASYSVASDRVWSLGRRL 3236
V CLSID +G+LLV+GDESG IC R+LH SG R G+ + F GG V A + AH EVLAISHVEG G LFVSGGKGGVVRLWKA CL+ +R G + V VE ++DMLVGGFQVSCLAASLS P+VLAGT EGTVFAF L Q S +R E +R G G GG RE D G + GAV MKFEHT E IE VCCS+EQELIAA DA GIVRTYRP+ +++PG +AAA+E+ R F+LVVECRLGARPV GE GEVLRTCT G LR+W TASLPTRPM PP + T P + EAL PL P+ SNAGT S +QENRDPS DPF+R A+ D G +G G G+ EE ELTARG+PPLPKARPA PRRVSFA AD+V+ L+DPYY S + XXXXXXXXXX +S P RLRQ W ++ SSPR + +RR SM + SDD AFVAPSR+QE S+WSTA EQ ELERRM EA+ EFD VPE AP YRAAAAAAVNIHP AKTF+GLVPVSLDAPP + + K LS+ QE+R+TEEDLA+DGMEPDCS + GFGS GR MWP EE EWYGGR + AEL+ S S ASDRVWSLGRRL
Sbjct: 5 VGCLSIDRRGELLVTGDESGAICARLLHH----------SGNRSGDGTAYGSSSFEGGPSXXXXXXXV-----------------------AEVLREAHSGEVLAISHVEGGA------------------------GDDDPALFVSGGKGGVVRLWKAACLERSRETAAAGGSGGDLEVQVELLKDMLVGGFQVSCLAASLSPTVPIVLAGTAEGTVFAFHLL-QAQEPSDRRDGEAEDDRPAVGYGDRGGRGGSAASGREPPDDAVG--RTELGAVLMKFEHTSEPIEGVCCSQEQELIAATDAAGIVRTYRPLLPRRVSTDNNPGDGAPPTTAAAAEA---------RRFELVVECRLGARPVXXXXXXXXXXXXXXXXXXXVGGE-------------------GEVLRTCTARGILRLWLTASLPTRPMR----PPXXSAPTRLP-------DDHEALAPL-PHTSNAGTDSSXXXXXXXXXXXXXXXXXXXXXVGAEQENRDPS----------------DPFSRSTAI-----DATGSGSGVVGV-----------------------------GGGERGEEVELTARGEPPLPKARPAAPRRVSFAPADQVYKLEDPYYGSGNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRASGANGTPGRLRQTWGTST----SSPRSNRARRGCSM--------DASDD--AFVAPSRMQEPSLWSTAAEQVELERRMTEAT-------HEFDGGAVPEPAAPTYRAAAAAAVNIHPLAKTFEGLVPVSLDAPPPRPMR---KGKQVSKRHLSKVQEQRITEEDLAFDGMEPDCSVIMGFGSSTVGR-MWPYEELEWYGGRKMSAELDHS-STASDRVWSLGRRL 724
BLAST of mRNA_P-fluviatile_contig20.4441.1 vs. uniprot
Match: A0A836CAG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAG1_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 6.130e-15 Identity = 81/279 (29.03%), Postives = 119/279 (42.65%), Query Frame = 3
Query: 1068 FVSGGKGGVVRLWKAMCLQVARGQNTGGANPVVHVEPVQDMLVGGFQVSCLAASLSMRTPLVLAGTKEGTVFAFRLQEQGHHDSPQRIDEDNGERGRACGAGGIGIYSREDKADLPGVRKA-----GQGAVHMKFEHTQESIEAVCCSREQELIAAADADGIVRTYRPVPLGNDSPGTAVSAAASESGGDRQHATTRPFQLVVECRLGARPVLCDFALGTGRGIGRRSDGGDPGEERDDPHRDENKDGGXXXXEGEVLRTCTTVGQLRVWPTASLPTRP 1889
FV+GG GVVR+W +QV G + + + P++++ GG QV+ LAA+ M V+AG+ EGTVFAFR +G RG A + +D + P ++ GQ + M EHT + I + CS EQ+L AADA G VR YRP P + A + A ++ + E +LG+ C+F + +GE L C+ G +R+WPTA+LP P
Sbjct: 198 FVTGGSDGVVRMWG---VQV-------GESGELKLAPLRELQAGGCQVTALAANARM----VVAGSLEGTVFAFRA---------------DGGRGAAA--------APDDGSSAPPDQEVETVVDGQPLIFM-LEHTTQPIVGIACSSEQQLTVAADATGAVRLYRPQPDERRGQLRQLRTPA-------ERAAALRWRTIAEMQLGSAAAGCEFGAAS---------------------------------QGERLAACSAEGLVRIWPTAALPLEP 398 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig20.4441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig20.4441.1 >prot_P-fluviatile_contig20.4441.1 ID=prot_P-fluviatile_contig20.4441.1|Name=mRNA_P-fluviatile_contig20.4441.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1056bp MAQDDRSWDETEETGLRLCAESSNSMPPSEVTSCCWDTSSPGMVGLCGADback to top mRNA from alignment at P-fluviatile_contig20:2604627..2615876+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig20.4441.1 ID=mRNA_P-fluviatile_contig20.4441.1|Name=mRNA_P-fluviatile_contig20.4441.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11250bp|location=Sequence derived from alignment at P-fluviatile_contig20:2604627..2615876+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig20:2604627..2615876+ >mRNA_P-fluviatile_contig20.4441.1 ID=mRNA_P-fluviatile_contig20.4441.1|Name=mRNA_P-fluviatile_contig20.4441.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6336bp|location=Sequence derived from alignment at P-fluviatile_contig20:2604627..2615876+ (Porterinema fluviatile SAG_2381)back to top |