mRNA_P-fluviatile_contig20.4428.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig20.4428.1 vs. uniprot
Match: D7FKX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKX7_ECTSI) HSP 1 Score: 749 bits (1935), Expect = 1.930e-250 Identity = 521/861 (60.51%), Postives = 588/861 (68.29%), Query Frame = 2
Query: 284 RSNSVGMSSLAKSDREERYKHLIQPIRDLAQNWDVDIAASLEDYLEDLEEITITLDGGASKVNFAEAALLIQGSTSVYSRKVEHVYQLVHRTIDFLTQQKHQKNAAASKNKNGDDDI---DFSAGEEAAFLPLDDIV-EGKNIDIPVDADLSHSYGRARSRRRSSVATNEISFHGVRLGGHGEDREGGRGGGGGMSGVCDGPDITRPPMFLMEQDYGNSFKMSTCAPQQESGTLLIEGSTLHDSGGLLNDSNIDGAARACDFWRGVGRDGEAGRDGGLKASAEAEGWAGA-MDMSTGNGGGDEDXXGSG------GDFGGPEDDFEDPRRDAPQGDPRTPDAAADASASMAGGRGLRSRAPKETADENEMPRNDRALTSPWTALDPHDPGTSQPRPLRKGRTHTLPPQLRRGRGSKKAHEDIYGGGGMDEQKDLGGSWVGHDGRLMSCVPLLGLAYKEFQYIANREKQRKAAQTRLARRRAHRVFMGRAELLPELIPSNSLAAGGGGAT--GMGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDDGQSIGGGDGGGVDADADVAPISLEDAFRDKPQTYQDVCRSHIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGESVLSRVASLLTPAQRARASAAIKGANASGDANIEAKAAESSGISSASSGEDGRSNTDINAEDAEPDLPLVDFGVVVAGKERFDVCRLFLASLQLANNGNVRLFHGNNAAEQATTPFQIELLTLQNSDNMTGCFAPSASLASPSKSTXXXXXXAYCGPDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVVGTTEMPGVIQA 2827
R + MSS A SDREER+KH++QPIRDLAQNWDVDIA SLEDYLEDLE ITITLDGGASKVNFAEAALLIQGST VYSRKVEHVYQLV RTIDFLTQQK A+K+K+GD D+ G+E AFLPLDDI+ EGK+IDI + R+R+RRRSS+A + FHG G + G D PDITRPPMFLMEQDYGNSFKMSTCAPQQ SGTLLIEG L DS D+ AARACDFWRG+GR+G DGGLKA A+ E W G+ MDM GGGD+ XX GDFG P DDF+DPR D P PRTP+ S++G R LR R + E E+ + D+A PW ALDPHDPGTSQ RP+RKGRT+ +P Q+R+ RG KK + GGG +EQK GGSWVG DGR+M VPLLGLAY EFQY+ NRE+QRKAAQTRLAR++A R FMGR + LPE P +S G G G+ XXXXXXXXXXXXXXXXXXXXX DA VAPISLEDAFR+KPQTY+D+CR+HIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYG+SVLSRVAS+LTPAQRARA A KG + K A+ + S + + A+ AEPD+PLVDFG VVAGKERFDVCRLFLASLQLANNGNVRLFHG+NAA+Q TTPF++ELLTLQNSDNM+G FAPSAS A GP+N XXXXXXXXXXXXXXXXXXXXXX GG+VGT E P +IQA
Sbjct: 99 RRSGFEMSSSADSDREERFKHILQPIRDLAQNWDVDIATSLEDYLEDLEHITITLDGGASKVNFAEAALLIQGSTCVYSRKVEHVYQLVQRTIDFLTQQKQXXXXXAAKSKSGDGDVGDDSIMGGDETAFLPLDDIILEGKHIDI------GSTSSRSRNRRRSSIAPSS-GFHG-----RGXXXXXXXXXXXXLPGGGDVPDITRPPMFLMEQDYGNSFKMSTCAPQQLSGTLLIEGGALDDSLFAQGDAETSEAARACDFWRGLGREG----DGGLKARADGERWTGSGMDM----GGGDDXXXXXXXXXXFDGDFG-PGDDFDDPRDDVPVDGPRTPEG------SVSGRRELRQR----ESIEKEVLKADKAPIDPWAALDPHDPGTSQARPIRKGRTYKIPAQVRKRRGGKKIQGEAKGGG--EEQKGDGGSWVGRDGRVMLSVPLLGLAYPEFQYVWNRERQRKAAQTRLARQQA-RGFMGREDFLPESAPPDSAGMNDVGTDYDGYGSDGSYCSDGGGGYADYGDQSDGGXXXXXXXXXXXXXXXXXXXXX---------------------DAGVAPISLEDAFRNKPQTYEDLCRNHIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGQSVLSRVASVLTPAQRARAHTAAKG--------VHPKVADDAAASPEEA---------VQADTAEPDVPLVDFGTVVAGKERFDVCRLFLASLQLANNGNVRLFHGDNAADQETTPFRLELLTLQNSDNMSGYFAPSASAAG-------------TGPENVPANGTTKKGXXXXXXXXXXXXXXXXXXXXXX-GGIVGTKETPSMIQA 873
BLAST of mRNA_P-fluviatile_contig20.4428.1 vs. uniprot
Match: A0A6H5KBI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBI6_9PHAE) HSP 1 Score: 578 bits (1490), Expect = 3.100e-186 Identity = 479/916 (52.29%), Postives = 542/916 (59.17%), Query Frame = 2
Query: 302 MSSLAKSDREERYKHLIQPIRDLAQNWDVDIAASLEDYLEDLEEITITLDGGASKVNFAEAALLIQGSTSVYSRKVEHVYQLVHRTIDFLTQQKHQKNAAASKNKNGDDDIDFSAGEEAAFLPLDDIVEGKNIDIPVDADLSHSYGRARSRRRSSVATNEISFHGVRLGGHGEDREGGRGGGGGMSGVCDGPDITRPPMFLMEQDYGNSFKMSTCAPQQESGTLLIEGSTLHDSGGLLNDSNIDGAARACDFWRGVGRDGEAGRDGGLKASAEAEGWAGA-MDMSTGNGGGDEDXX-------GSGGDFGGPEDDFEDPRRDA--------------------PQGDPRTPDAAADASASMAGGRGLRSRAPKETADENEMPRNDRALTSPWTALDPHDPGTSQPRPLRKGRTHTLPPQLRRGRGSKKAHEDIYGGGGMDEQKDLGGSWVGHDGRLMSC--------------------------------------------VPLLGLAYKEFQYIANREKQRKAAQTRLARRRAHRVFMGRAELLPELIPSNSLAAGGGGAT--GMGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDDGQSIGGGDGGGVDADADVAPISLEDAFRDKPQTYQDVCRSHIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGESVLSRVASLLTPAQRARASAAIKGANASGDANIEAKAAESSGISSASSGEDGRSNTDINAEDAEPDLPLVDFGVVVAGKERFDVCRLFLASLQLANNGNVRLFHGNNAAEQATTPFQIELLTLQNSDNMTGCFAPSASLASPSKSTXXXXXXAYCGPDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVVGTTEMPGVIQA 2827
MSS A +DREER+KH++QPIRDLAQNWDVDIA SLEDYLEDLE ITITLDGGASKVNFAEAALLIQGST VYSRKVEHVYQLV RTIDFLTQQ Q N+ A+K+K GD D+ DD + G ++ + SGTLLIEG L +S + + AARA DFWRG+GR+G DGGLKA + E W G+ MDM GG XX G GDFG P DDF+D R D P PRTP+ S++ R LR R KE E+ + D+A PW ALDPHDPG SQ RP+RKGRT+ +P QLR+ RG KK + GG +EQK GGSWVG DGR+ C VPLLGLAY EFQY++NRE+QRKAAQTRLAR++A RVFMGR + LP+ P +S G G G+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A VAPISLE AFR+KPQTY+D+CR+HIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYG+SVLSRVAS+LTPAQRARA A+KG ++ K A++S G + A+ AEP++PLVDFG VVAGKERFDVCRLFLASLQLANNGNVRLFHG+NAAEQ TTPF++ELLTLQNSDNM+G FAPSAS A GP+N XXXXXXXXXXXXXXXXXXXXXXX GGVVGT E P +IQA
Sbjct: 1 MSSSADNDREERFKHILQPIRDLAQNWDVDIATSLEDYLEDLEHITITLDGGASKVNFAEAALLIQGSTCVYSRKVEHVYQLVQRTIDFLTQQNQQNNSNAAKSKGGDGDVG------------DDSIVGGDV-------------------------------------------------------------------------------------RTSGTLLIEGGALDESLFAHDVAETSEAARASDFWRGLGREG----DGGLKARVDGERWTGSGMDM-----GGXXXXXXXXXXXXGFDGDFG-PGDDFDDARDDVRHSGGEWERGGRQVTRTRVVPVDGPRTPEG------SVSERRELRQRESKE----KEVQKVDKAPIDPWAALDPHDPGRSQARPIRKGRTYKIPAQLRKRRGGKKMQGEAKGG--EEEQKGDGGSWVGRDGRVAMCGDTVGMIRCSDFVFVFVSHFCNVVSHMISLASLRRYSWSSCRLSVPLLGLAYPEFQYVSNRERQRKAAQTRLARQQA-RVFMGREDFLPDSAPPDSAGMNDVGTAYDGYGSDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------AGVAPISLEGAFRNKPQTYEDLCRNHIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGQSVLSRVASVLTPAQRARAHTAVKG--------VQPKMADNSA---------GSPEEAVQADTAEPEVPLVDFGTVVAGKERFDVCRLFLASLQLANNGNVRLFHGDNAAEQETTPFRLELLTLQNSDNMSGYFAPSASAAG-------------TGPENVPANGATKKXXXXXXXXXXXXXXXXXXXXXXX-GGVVGTKESPSMIQA 744
BLAST of mRNA_P-fluviatile_contig20.4428.1 vs. uniprot
Match: A0A836CG43_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG43_9STRA) HSP 1 Score: 261 bits (666), Expect = 3.140e-69 Identity = 320/907 (35.28%), Postives = 395/907 (43.55%), Query Frame = 2
Query: 323 DREERYKHLIQPIRDLAQNWDVDIAASLEDYLEDLEEITITLDGGASKVNFAEAALLIQGSTSVYSRKVEHVYQLVHRTIDFLTQQKHQKNAAASKNKN-GDDDIDFS--AGEEAAFLPLDDIVE-GKNIDIPVDADLSHSYGRARSRRRSSVATNEISFHGVRLGGHGEDREGGRGGGGGMSGVCDGPDITRPPMFLMEQDYGNSFKMSTCAPQQESGTLLIEGSTLHDSGGLLNDSNIDGAARAC-----DFWRGVGRDGEAGRDGGLKASAEAEGWAGAMDMSTGNGGGDEDXXGSGGDFGGPEDDFEDPRRDAPQGDPRTPDAAADASASMAGGRGLRSRAPKETADENEMPRNDRAL-------------------------------------------------TSPWTALDPHDPGTSQPRPLRKGRTHTLPPQLRRGRGSKKAHEDIYGGGGMDEQKDLGGSWVGHDGRLMSCVPLLGLAYKEFQYIANREKQRKAAQTRLARRRAHRVFMGRAELLPELIPSNSLAAGGGGATGMGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDDGQSIGGG-------------------------------------DGGGVDADADV------------APISLEDAFRDKPQTYQDVCRSHIEAFMRGTEK------------------------------------YAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGESVLSRVASLLTPAQRARASAAIKGANASGDANIEAKAAESSGISSASSGEDGRSNTDINAEDAEPDLPLVDFGVVVAGKERFDVCRLFLASLQLANNGNVRLFHGNNAAEQATTPFQIELLTLQNSDNMTGCFAPS 2614
+RE+R+ HL+QPIR+LA NW +DIA SLEDYLE+LE ITITL+GG S +NFAEAALLIQGST +YSRKVEH+Y LV +TID LT Q + A+K+ GD++ D + GE FL LDD++E G +ID+P E R G G +ITRP MFL+EQD+G++F+MSTC SG L+I+GS SG S GAA A + W G G+ G GG + S G D S G XX FE A+ A AP E PW LDPHDPGT P+P RKGRT +P L+ +G K GG EQ+ G DGR VPL GLAY + YI RE++R G + ++ A G A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G + G DGGG+ D P+SL DAFRD PQTY+D+CRSHI+AFMRG E+ YA ET LS+RVGAWQ++LEPL+ Q R AFD+ A G++VL+ ++L A R R +AA A+A + KAA + +V FG VVAG+ERFDVCR+FLASLQLAN+G V L H A EQ PF++++L + G FAPS
Sbjct: 4 EREQRFAHLLQPIRELASNWSIDIATSLEDYLEELEHITITLEGGESNLNFAEAALLIQGSTCIYSRKVEHLYALVLQTIDHLTNQHRARAGGAAKDGGEGDEEGDXAKQGGEAGGFLLLDDLIEEGADIDLPPV----------------------------------EARRG-------------GAEITRPAMFLLEQDHGSTFRMSTCQVDA-SGALMIDGSQCSASG----FSGSGGAAAATSSQLDESWAGFGQ----GLSGGFENSY------GNGDASDGXXXXXXXXXXXXXXXXXXXXXFEYXXXXXXXXXXXXXXXXXXXXATEA--------APGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPVENDPWAMLDPHDPGTRPPKPWRKGRTFRVPASLKAKKGGK-------GGAKKREQEAGAAEEAGGDGR----VPLTGLAYPD--YILKRERRRXXXXXXXXXXXLAAELRG-GXXCXDXXXADVNAQDGAAADEDYGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDPAWPAATPRGGFVATGVAHLPTPPASXXXXXXXXXXXXXXXXRMGVRKYSRARDGGGMWGDXXXXXXXXXXXXXXGGPLSLADAFRDAPQTYEDLCRSHIQAFMRGAEQAPVPAEAEHDAAMRRSTVLTRRKALSRLLAPQNGHAYAQETGLSRRVGAWQDRLEPLLREQSARAAFDMRACGDAVLASAVAVLPRAARERLAAA---ADADAPPPTKDKAAA---------------------------VDVVAFGRVVAGRERFDVCRMFLASLQLANSGCVALRHAATAREQGRVPFELQVLRAAAPQEVAGFFAPS 796
BLAST of mRNA_P-fluviatile_contig20.4428.1 vs. uniprot
Match: A0A329RXK6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RXK6_9STRA) HSP 1 Score: 191 bits (485), Expect = 8.860e-47 Identity = 228/819 (27.84%), Postives = 342/819 (41.76%), Query Frame = 2
Query: 329 EERYKHLIQPIRDLAQNWDVDIAASLEDYLEDLEEITITLDG----------GASKVNFAEAALLIQGSTSVYSRKVEHVYQLVHRTIDFLTQQKH-QKNAAASKNKNGDDDIDFSAGEEAAF---LPL-DDIVEGKNIDIPVDADLSHSY------------GRARSRRRSSVATNEISFHGVRLGGHGEDREGGRGGGGGMSGVCDGPDITRPPMFLMEQDYGNSFKMSTCAPQQESGTLLIEGSTLHDSGGLLNDSNIDGAARACDFWRGVGRDGEA-----GRDGGLKASAEAEGWAGAMDMSTGNGGGDEDXXGSGGDFGGPEDDFE----DPRRDAPQGDPRTPDAAADASASMAGGRGLRSRAPKETADENEMPRNDRALTSPWTALDPHDPGTSQPRPLRKGRTHTLPPQLRRGRGSKKAHEDIYGGGGMDEQKDLGG--------------------SWVGHDGRLMSCVPLLGLAYKEFQYIANREK------QRKAAQTRLARR-RAHRVFMGRAELLPELIPSNSLAAGGGGATGMGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDDGQSIGGGDGGGVDADADVA-PI-SLEDAFRDK---PQTYQDVCRSHIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGESVLSRVASLLTPAQRARASAAIKGANASGDANIEAKAAESSGISSASSGEDGRSNTDINAEDAEPDLPLVDFGVVVAGKERFDVCRLFLASLQLANNGNVRLFHGNNAAEQATTPFQIELLTLQN 2581
E R +HL+QPIRDL++NW++D+A+ LE+Y++ LE + I D G +NFAEAALLIQG++ +YSRKVE+++ LV++T+ L++Q Q+N + + DD E + F LPL D++ E K+ I + +A +R ++++ + I+ G + PD E+D+G +FK+ +C LH SG LL D + + +G + A GR GG+ +A+ E A A++ + D+D +G D + D+E +P +D P + + + + G G RS A+++ PW LD +D TS RP +KGR + P ++ + A + G GMD++ + G SWV + S PL + F K QR+A + RR A +A LL E A G + D G DGG D D+ P+ S E A D P TY+++CR H+ +FM GTEKY ET LSK+V WQ+KL PL++ Q+ R FDIH YG ++ R+ ++ AS A+ D N A+ + SAS E+ +V F +V GK +F+VCRLFLASLQLANNGNV L H AAE PF+++LL+ N
Sbjct: 3 EGRLQHLLQPIRDLSKNWNIDLASELEEYMDKLENLNIAFDPEDGASIANGEGPGVMNFAEAALLIQGTSVIYSRKVEYLHALVYQTLAHLSKQDDKQQNQQSGETGEFQDDXXXGDAEASVFNNPLPLYDELEEAKSTHITLKRAKQEDXXXXXXXXXXXXEAKALNRSKNNIQAS-IALMGSLV-----------------------PD---------ERDHGETFKLLSC--------------NLHASGVLLLDEASKKYLKTAQ--QAIGDESLAFGETPGRQGGMWVAADGENPATALNFDDLDANDDDDGHDNGFDD---QPDYEYDGGEPVQDVPMDEAAGNAQLQEPATTEPSGPGTRSMTVLPVAEKD-----------PWAPLDAYDASTSVARPFKKGRAYPRVPAYKKKKTGSPALSNKEGAVGMDDEAEQDGLSDPAFQDRFFMSSNGPQWASWVWTE--TTSENPLEKTCKRTFCKAPLLVKTCDAMWQREAKWRSIMRRCEAREKQSAQAMLLREQAMEEEEADGNDQIQALTLSSATARLDMAFRNDANGNDEDDSNG------------------------DNXXXXGFDGGDWDQGNDLEDPMGSYEAAAVDSSGGPLTYEEICRQHLASFMSGTEKYVRETDLSKKVSDWQDKLSPLLKQQDTRPPFDIHLYGREIIGRLEE-----EQKNASLAMHSKTTKRDKNKRAR------LESASDEEES----------------VVPFETLVDGKSQFEVCRLFLASLQLANNGNVALSHARTAAEHGQVPFEMQLLSTVN 705
BLAST of mRNA_P-fluviatile_contig20.4428.1 vs. uniprot
Match: H3GF21_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GF21_PHYRM) HSP 1 Score: 182 bits (461), Expect = 9.470e-43 Identity = 236/839 (28.13%), Postives = 350/839 (41.72%), Query Frame = 2
Query: 254 HEGKRTERIFRSNSVGMSSLAKSDREE-RYKHLIQPIRDLAQNWDVDIAASLEDYLEDLEEITITLD---------GGASKVNFAEAALLIQGSTSVYSRKVEHVYQLVHRTIDFLTQQKHQK--NAAASKNKNGDDDIDFSAGEEAAF---LPL-DDIVEGKNIDIPV------------DADLSHSYGRARSRRRSSVATNEISFHGVRLGGHGEDREGGRGGGGGMSGVCDGPDITRPPMFLMEQDYGNSFKMSTCAPQQESGTLLIEGST--LHDSGGLLNDSNIDGAARACDFWRGVGRDGEAGRDGGLKASAEAEGWAGAMDMSTGNGGGDEDXXGSGGDFGGPEDDFEDPRRDAPQGDPRTPDAAADASASMAGGRGLRSRAP--KETADENEMPRNDRALTSPWTALDPHDPGTSQPRPLRKGRTHTLPPQLRRGRGSKKAHEDIYGGGGMDEQKDLGGS---------WVGHDG---------RLMSCVPL----------LGLAYKEFQYIANREKQRKAAQTRLARRRAHRVFMGRAELLPELIPSNSLAAGGGGATGMGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDDGQSIGGGDGGGVDADADVAPISLEDAFRDK---PQTYQDVCRSHIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGESVLSRVASLLTPAQRARASAAIKGANASGDANIEAKAAESSGISSASSGEDGRSNTDINAEDAEPDLPLVDFGVVVAGKERFDVCRLFLASLQLANNGNVRLFHGNNAAEQATTPFQIELLTLQN 2581
H + I RS+ ++ A D E R +HL+QPIRDL++NW++D+A+ LE+Y++ LE ++I D G S +NFAEAALLIQG++ +YSRKVE+++ LV +T+ L++Q+ K N + +G D+ + E AF LPL D++ E K I + D RA +R ++++ + I+ G + PD E+D+G +FK+ +C LL E S L + D ++ G+ G+ +A+ E A A++ + D+ G+G D E P + GD D + + A G + P + T P +++ PW LD +D TS RP RKGR++ P ++ + A + GMD+ + G ++G DG +S PL L K + RE + ++A R R +A LL E A G + XXXXXXXXXXXXX GG G D D + A P TY+++CR H+ +FM GTEKY ET LSK+V WQEKL PL++ Q+ AFDIH YG ++ R+ + S A + A+ R+ D ED E ++ V F +V GK F+VCRLFLASLQLANNGNV L H + A+ PF+++LL+ N
Sbjct: 314 HRSSNIQIIARSSPQKAAAAAAFDMSEGRLQHLLQPIRDLSKNWNIDLASELEEYMDKLENLSIAFDPEDGASIDRDGDSVMNFAEAALLIQGTSVIYSRKVEYLHALVFQTLAHLSKQQDDKPQNQQNGEPIDGQDEEENDDAEAGAFNNPLPLYDELQEAKAAHITLKQVTQQDEETETDRXXXXKEARALNRSKNNMQAS-IALMGSLV-----------------------PD---------ERDHGETFKLMSCNLHATGVLLLDEASKKYLRPQQQAIGDQSLAFGETP-------------GKQKGMWVAADGETPAMALNFDDMDASEDDGGDGNGLD--------EQPDYEYDGGDAMDQDVPVENTGDTAQEEGASAPEPLGRVTRSATAPPTDEK---DPWAPLDAYDASTSVARPFRKGRSYPKVPAYKKKKAGVAALSNKESAVGMDDDAEQDGLSDPTFQERFFMGSDGPQWASWVWTETLSDNPLEKTCKRTFCKAPLLVKSCDALWQREAKWRSAMRRCEAREKQSA---QAMLLREQAMEEEEAEGNDQMQALTLSTATARLDMAFRHDANGTNDDEDXXXXXXXXXXXXX-----------------XGGDWDQGNDMDDPMGSYEAAAAATGSSGGPLTYEEICRQHLASFMSGTEKYVRETDLSKQVSDWQEKLTPLLKQQDAHPAFDIHHYGREIIDRLEEEQKSTSLDKHSRATRKDKATNK----------------------RARLDPVPEDEE-EIETVPFETLVGGKSPFEVCRLFLASLQLANNGNVALSHAHTTADHGKVPFKMQLLSTAN 1052
BLAST of mRNA_P-fluviatile_contig20.4428.1 vs. uniprot
Match: A0A225X0F2_9STRA (Condensin-2 complex subunit H2 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X0F2_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.140e-41 Identity = 212/822 (25.79%), Postives = 324/822 (39.42%), Query Frame = 2
Query: 329 EERYKHLIQPIRDLAQNWDVDIAASLEDYLEDLEEITITLD---------GGASKVNFAEAALLIQGSTSVYSRKVEHVYQLVHRTIDFLTQQKHQKNAAASKNKNGDDDIDFSAGEEAAF---LPL-DDIVEGKNIDIP---VDADLSHSYGRARSRRRSSV--ATNEISFHGVRLGGHGEDREGGRGGGGGMSGVCDGPDITRPPMFLMEQDYGNSFKMSTC------------------APQQESGTLLIEGSTLHDSGGLLNDSNIDGAARACDFWRGVGRDGEAGRDGGLKASAEAEGWAGAMDMSTGNGGGDEDXXGSGGDFGGPEDDFEDPRRDAPQGDPRTPDAAADASASMAGGRGLRSRAPKETADENEMPRNDRALTS--------PWTALDPHDPGTSQPRPLRKGRTHTLPPQLRRGRGSKKAHEDIYGGGGMDEQKDLGG--------------------SWVGHDGRLMSCVPLLGLAYKEFQYIANREK------QRKAAQTRLARR-RAHRVFMGRAELLPELIPSNSLAAGGGGATGMGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDDGQSIGGGDGGGVDADADVAPISLEDAFRDKPQTYQDVCRSHIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGESVLSRVASLLTPAQRARASAAIKGANASGDANIEAKAAESSGISSASSGEDGRSNTDINAEDAEPDLPLVDFGVVVAGKERFDVCRLFLASLQLANNGNVRLFHGNNAAEQATTPFQIELLTLQN 2581
E R +HL+QPIRDL++NW++D+A+ LE+Y++ LE ++I D G + +NFAEAALLIQG++ +YSRKVE+++ LV++T+ L++Q Q +A ++ + + G+ + F LPL D++ E K+ I V D S R + + ++ + N I +G + E+D+G +FK+ +C P Q++ L G T + GG+ ++ D A +F D + G D GL + E AG +P +DAP D A GL T++E+ R R+ T+ PW LD +D TS RP +KGR++ P ++ + + G G+D+ +L G SWV + S PL + F + K QR+A + RR A +A LL E G + + +AD ED D P TY+++CR H+ +FM GTEKY ET LSK+V WQEKL PL++ Q+ FDIH YG ++ R L Q+ N+S D + S+ D + + + V F +V GK +++VCRLFLASLQLANNGNV L H + A+ PF+++LL+ N
Sbjct: 3 ESRLQHLLQPIRDLSKNWNIDLASELEEYMDKLEHLSIAFDTEDGARIARDGDNVMNFAEAALLIQGTSVIYSRKVEYLHALVYQTLAHLSKQ--QDDAQQTQQSETGEPREEDEGDSSVFSNPLPLYDELEEAKSTHITLKKVQQDEEESDKRRKRKEAKALYRSKNNIQASIALMG----------------------------SLVPDERDHGETFKLMSCNLHASGVLLLDEASKKYLRPVQQTSNSLAFGETPNRHGGMWVAADGDNPAMMLNFDDIDADDDDXGNDNGLDEQPDYEFDAG------------------------------EPMQDAPM----------DGKADNTQQEGLM------TSEESSR-RVTRSATASLPASEKDPWAPLDAYDASTSVARPFKKGRSYPRVPAYKKKKAGPAVLSNKDGAVGLDDDTELDGLSDPAFQDRFFAGSNGSQWASWVWTE--TTSENPLEKTCKRTFCWAPLLCKNCDALWQREAKWRSMMRRCEAREKQSAQAMLLREQAMEEEEVDGNDQMQALTLSTATARLDMAFRND-----------------------------------------------ANGNAD------EDDSTDGPLTYEEICRQHLASFMSGTEKYVRETDLSKKVSDWQEKLTPLLKQQDTHPPFDIHHYGREIIGR----LEEEQK----------NSSLDKQRK------------STRRDKNKRARVGQVSDDEEREAVPFETLVDGKSQYEVCRLFLASLQLANNGNVGLSHAHTTADHERVPFEMQLLSTAN 666
BLAST of mRNA_P-fluviatile_contig20.4428.1 vs. uniprot
Match: A0A3M6VQF7_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQF7_9STRA) HSP 1 Score: 172 bits (437), Expect = 9.970e-41 Identity = 232/826 (28.09%), Postives = 349/826 (42.25%), Query Frame = 2
Query: 335 RYKHLIQPIRDLAQNWDVDIAASLEDYLEDLEEITITLD--GGAS---------KVNFAEAALLIQGSTSVYSRKVEHVYQLVHRTIDFLTQQ--------KHQKNAAASKNKNGDDDIDFSAGEEAAFLPL---DDIVEGKNIDIPVDADLSHSY------------GRARSRRRSSVATNEISFHGVRLGGHGEDREGGRGGGGGMSGVCDGPDITRPPMFLMEQDYGNSFKMSTCAPQQESGTLLIEGSTLHDSGGLLNDSN----IDGAARACDFWRGVGRDGEAGRDGGLKASAEAEGWAGAMDMSTGNGGGDEDXXGSGGDFGGPEDDFEDPRRDAPQGDPRTPDAAADASASMAGGRGLRSRAPKETADE--NEMPRNDRALTSPWTALDPHDPGTSQPRPLRKGRTHTLPPQLRRGRGSKKAHEDIYGGGGMDEQKDLGG--------------------SWVGHDG-----------RLMSCVPLLGLAYKEFQYIANREKQRKAAQTRLARRRAHRVFMGRAELLPELIPSNSLAAGGGGATGMGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDDGQSIGGGDGGGVDADADVAPISLEDAFR------DKPQTYQDVCRSHIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGESVLSRVASLLTPAQRARASAAIKGANASGDANIEAKAAESSGISSASSGEDGRSNTDINAEDAEPDLPLVDFGVVVAGKERFDVCRLFLASLQLANNGNVRLFHGNNAAEQATTPFQIELLTLQN 2581
R +HL+QPIRDL++NW++D+A LE+Y++ LE + I D GA+ +NFAEAALLIQG++ +YSRKVE+++ LV++T+ L++Q ++Q+ +NK D AG+ PL +++ E K I + + RA R ++++ + I+ G + PD E+D+G +FK+ +C LH SG LL D ++ RA D G GR GG+ +A+ + A A++ + DED GD + E+P D G P DA D +A A R + + P TA +P ++ PW LD +D TS RP +KG+++ P ++ + A + G GM++ + G SW+ + R PLL K + RE + ++ + R A A LL E A G + XXXXXXXXXXX GGD G D D P+ +DA D+P TY ++CR H+ +FM GTEKY ET LSK+V WQE+L PL++ Q+ FDIH YG ++ R ++ + S N +K+ + ++ R+ D+ +ED E V F +V GK +F+VCRLFLA+LQLAN+GNV L H + E PF+++LLT N
Sbjct: 5 RLQHLLQPIRDLSKNWNIDLATELEEYMDKLENLNIAFDPKDGANITKDGDQVGVMNFAEAALLIQGTSVIYSRKVEYLHALVYQTLAHLSKQQDDHYQSQRNQETGEIQENKEDD-----GAGDSVFDNPLPLYNELKEAKTSHITLKRTDEENEEXXXXXXXXXXEARALHRSKNNIQAS-IALMGSLV-----------------------PD---------ERDHGETFKLLSC--------------NLHASGVLLLDEASKKYLNPQHRAADNAFGE----TPGRHGGMWVAADGDNPATALNFDDMDASDDEDR----GDNNALD---EEPDYDYDAGAPLH-DAPMDDAADNAQERAV-AEEPSRTATRLMTTLPAGEK---DPWAPLDAYDASTSVARPFKKGQSYPRVPAYKKKKADLTALNNKEGVVGMNDDAEQDGLSDPAFRDRFFTGSKGPQWASWIWSETAAENPLEKTCKRTFCRAPLL---LKTCHTLWQREAKWRSI---IRRCEAREKQSAEAMLLREEAMEEEEADGNDRLQALTLSTATARLDMAFQNDANGXXXXXXXXXXXYDN------------------------GGDWEGNDTDG---PLGFDDAAATVAGTSDRPLTYDEICRQHLASFMSGTEKYVRETDLSKQVSDWQERLTPLLKQQDAHPPFDIHHYGREIIER----------------LEEEHKSSSLNKHSKSTKRD--------KNKRARIDLGSEDDEK-KETVPFETLVDGKSQFEVCRLFLATLQLANSGNVSLSHAHTITEHGQVPFEMQLLTSAN 704
BLAST of mRNA_P-fluviatile_contig20.4428.1 vs. uniprot
Match: A0A8K1FJ03_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJ03_PYTOL) HSP 1 Score: 172 bits (437), Expect = 1.010e-40 Identity = 226/823 (27.46%), Postives = 334/823 (40.58%), Query Frame = 2
Query: 320 SDREERYKHLIQPIRDLAQNWDVDIAASLEDYLEDLEEITITLDGG------------ASKV---NFAEAALLIQGSTSVYSRKVEHVYQLVHRTIDFLTQQKHQKNAAASK------------NKNGDDDIDFSAGEE---AAFLPL-DDIVEGKNIDIPVDADLSHSYGRARS---RRRSSVATNEISFHGVRLGGHGEDREGGRGGGGGMSGVCDGPDITRPPMFLMEQDYGNSFKMSTCAPQQESGTLLIEGSTLHDSGGLLNDSNIDGAARACDFWRGVGRDGEAGRDGGLKASAEAEGWAGAMDMSTGNGGGDEDXXGSGGDFGGPED---DFEDPRRDAPQGDPRTPDAAADASASMAGGRGLRSRAPKETADENEMPRNDRALTSP-----WTALDPHDPGTSQPRPLRKGRTHTLPPQLRR---GRGSKKAHEDIYGGGGMDEQKDLGGSWVGHDGRLMSCVPLLGLAYKE-FQYIANREKQRKAAQTRLARRRAHRVFMGRAELLPELIPS-----------NSLAAGGGGATGMGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC------DDGQSIGGGDGGGVDADADVAPISLEDAFR---------DKPQTYQDVCRSHIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGESVLSRVASLLTPAQRARASAAIKGANASGDANIEAKAAESSGISSASSGEDGRSNTDINAEDAEPDLPLVDFGVVVAGKERFDVCRLFLASLQLANNGNVRLFHGNNAAEQATTPFQIELLT 2572
S R++HL+QPIRDL++NW++D+A LE+YL++LE +TI D AS+V NFAEAALLIQG++ +YSRKVE++Y LV +T+ L++Q+ +A + N NG DD D S A LP+ +D+ E +NI + + + G++R + ++S+ + I+ G + PD E+D+G +FK+ +C +L E S + L ++ GA++ R + E WA + ++ + G D G D G +D DF+DP D DP AP E R R T+P W LDP+D S RP RKGR++ + + R +KK ED G G+D+ A+KE F ANR + L R + F + P L+ S L +T A XXXXXX DD GGD D+ A +SL D +K +Y+++CR H+E FM+GTEKY ET L+++V WQ+KL+P+++ Q FDIH YG +L ++E+K + + ++ P + FG +V+G +F+VCR+FLASLQLANNGNV L HGN AAEQ PF+++LLT
Sbjct: 2 SSESSRFQHLLQPIRDLSKNWNIDLAQELEEYLDELENLTIAFDANEGPSAVVAKKSVASQVQLMNFAEAALLIQGTSMIYSRKVEYLYALVFQTLAHLSKQQEDTHANLQRQRRGENPEDDGDNANGGDDQDNSDSHLDILANPLPIYEDVDEARNITLKRPSSSVRNAGQSRPDALKTKNSIQAS-IALMGSLV-----------------------PD---------ERDHGETFKLLSCHLHPSGVLMLDEASRKY----LKDEVTYAGASKRMPPTPAAPR----------TSLIFDEPWALDDNRTSLDHGTKLDFDGVASDDDGGDDGHYDFDDPA-DGGDVDPFL--------------------APPEEVRATTTTRTRRKTTAPDAKDPWAPLDPYDASKSTVRPFRKGRSYPVRGAAAKKLLARKNKKLEED--GVDGVDDP-----------------------AFKERFLLGANRPQWSTWVWNELDERALEQKFKKKYCKAPCLMTSCDALWRLETKWKGLMRRSTASTTQSAQAILLQEQTEEEQEEMHAMTLESGLINDAYVMDPVTDDVNNXXXXXXXXXYDDVDDHAVDFGGDEDAWDSAPHRASMSLLDGATSRSNDAHDSEKGLSYEEICRQHLEEFMKGTEKYMRETDLTRQVNEWQDKLDPILKEQNSHPLFDIHHYGREILG---------------------------HLESKKPKRKAXXXXXXXXXXXXXXXXDGDETAP----IPFGEIVSGLNQFEVCRMFLASLQLANNGNVHLVHGNTAAEQEAVPFEMQLLT 700
BLAST of mRNA_P-fluviatile_contig20.4428.1 vs. uniprot
Match: G5A917_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G5A917_PHYSP) HSP 1 Score: 170 bits (430), Expect = 4.710e-40 Identity = 213/822 (25.91%), Postives = 330/822 (40.15%), Query Frame = 2
Query: 329 EERYKHLIQPIRDLAQNWDVDIAASLEDYLEDLEEITITLD-----------GGASKVNFAEAALLIQGSTSVYSRKVEHVYQLVHRTIDFLTQQKHQKNAAASKN-------KNGDDDIDFSAGEEAAFLPL-DDIVEGKNIDIPVDA----------------DLSHSYGRARSRRRSSVATNEISFHGVRLGGHGEDREGGRGGGGGMSGVCDGPDITRPPMFLMEQDYGNSFKMSTCAPQQESGTLLIEGSTLHDSGGLLNDSNID---GAARACDFWRGVGRDGEAGRDGGLKASAEAEGWAGAMDMSTGNGGGDEDXXGSGGD------FGGPEDDFEDPRRDAPQGDPRTPDAAADASASMAGGRGLRSRAPKETADENEMPRNDRALTSPWTALDPHDPGTSQPRPLRKGRTHTLPPQLRRGRGSKKAHEDIYGGGGMDEQKDLGG--------------------SWVGHDGRLMSCVPLLGLAYKEFQYIANREK------QRKAAQTRLARR-RAHRVFMGRAELLPELIPSNSLAAGGGGATGMGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDDGQSIGGGDGGGVDADADVAPISLEDAFRDKPQTYQDVCRSHIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGESVLSRVASLLTPAQRARASAAIKGANASGDANIEAKAAESSGISSASSGEDGRSNTDINAEDAEPDLPLVDFGVVVAGKERFDVCRLFLASLQLANNGNVRLFHGNNAAEQATTPFQIELLTLQN 2581
E R +HL+QPIR +NW++D+A+ LE+Y++ LE ++I D G +NFAEAALLIQG++ +YSRKVE+++ LV++T+ L++Q+ K + ++ ++GDDD D A LPL D++ E K I + +++ R+++ ++S+A M + PD E+D+G +FK+ +C LH SG LL D GA + + + GR GG+ + + E + A++ + DED + D F G E +DP DA G+ + A + S T +P ++ PW LD +D TS RP +KGR++ P ++ + + A + G G+D+ + G SWV + S PL + F + K QR+A + RR A +A LL E A G D Q++ A + + D P TY+++CR H+ +FM GTEKY ET LSK+V WQEKL PL++ Q+ FDIH YG ++ R+A ++ +S + + D N R+ + ++D E V F +V GK +F+VCRLFLASLQLAN GNV L H + A+ PF++ELL+ N
Sbjct: 3 EGRLQHLLQPIR---KNWNIDLASELEEYMDKLEHLSIAFDPEDGASIAREGDGPGVMNFAEAALLIQGTSVIYSRKVEYLHALVYQTLAHLSKQQDDKQSHKQQSDENGEPMEDGDDDGDAGASVFKNPLPLYDELEEAKPTHITLKKVKQEDEXXXXXXXXXXXEANALNRSKNNIQASIAL--------------------------MGSLV--PD---------ERDHGETFKLLSC--------------NLHASGVLLLDEASKKYLGAKQRAAGDQSLVFGETPGRQGGMWVAGDGENPSMALNFDDMDADEDEDTNDNAFDKQPDYEFDGGEPMQDDPMDDAANGEQQEETPAEEPPRSA-------------TRSTTALPAGEK---DPWAPLDAYDASTSVARPFKKGRSYPRVPAYKKKKAGQAALSNKEGAVGIDDDAEQDGLSDPAFQDRFFMGSNGPQWASWVWTE--TGSENPLEKTCKRAFCRASLLVKTCDALWQREAKWRSIMRRCEAREKQSAQAMLLREQAMEEEEADGN--------------------------------------------------------DQMQAL--------TLSTATARLDMADGG---PLTYEEICRQHLASFMSGTEKYVRETDLSKQVSDWQEKLTPLLKQQDAHPPFDIHLYGREIIERLAE-----EKKNSSLDKRSKSTKRDKNK-------------------RARVEPVSDDEEKKKEAVPFETLVVGKSQFEVCRLFLASLQLANTGNVALSHAHTTADHGRVPFKMELLSTAN 661
BLAST of mRNA_P-fluviatile_contig20.4428.1 vs. uniprot
Match: A0A662X5Z3_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X5Z3_9STRA) HSP 1 Score: 171 bits (432), Expect = 4.860e-40 Identity = 220/829 (26.54%), Postives = 325/829 (39.20%), Query Frame = 2
Query: 329 EERYKHLIQPIRDLAQNWDVDIAASLEDYLEDLEEITITLD-----GGAS----------------KVNFAEAALLIQGSTSVYSRKVEHVYQLVHRTIDFLTQQK---HQKNAAASKNKNGDDDIDFSAGEEAAFLPL-DDIVEGKNIDIPVDADLSHSYGRARSRRRSSVATNEISFHGVRLGGHGEDREGGRGGGGGMSGVCDGPDITRPPMFLM------EQDYGNSFKMSTCAPQQESGTLLIEGSTLHDSGGLLNDSNIDGAARACDFWRGVGRD----GEA-GRDGGLKASAEAEGWAGAMDMSTGNGGGDEDXXGSGGDFG---GPEDDFEDPRRDAPQGDPRTPDAAADASASMAGGRGLRSRAPKETADENEMPRNDRALTSPWTALDPHDPGTSQPRPLRKGRTHTLPPQLRRGRGSKKAHEDIYGGGGMDEQKDLGG--------------------SWVGHDG-----------RLMSCVPLLGLAYKEFQYIANREKQRKAAQTRLARRRAHRVFMGRAELLPELIPSNSLAAGGGGATGMGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDDGQSIGGG-DGGGVDADADV-------APISLEDAFRDKPQTYQDVCRSHIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGESVLSRVASLLTPAQRARASAAIKGANASGDANIEAKAAESSGISSASSGEDGRSNTDINAEDAEPDLPLVDFGVVVAGKERFDVCRLFLASLQLANNGNVRLFHGNNAAEQATTPFQIELLTLQN 2581
E R++HL+QPIRDL++NW++D+A LE+Y++ L+ + I D GAS +NFAEAALLIQG++ +YSRKVE+++ LV +T+ LT+Q+ H+ +A A LPL D++ E K I + RA+ DR G + G + + + + + LM E+D+G++FK+ +C LH SG LL D A R VG GE GR+GG+ +A+ + A++ + D++ D G P+ DF+ D G P + + G +AP+ +P +++ PW LD +D TS RP RKGR++ P ++ +G G ++ +L G SWV + R PLL K + RE + ++A R R +A LL E DDG G DGG D A + ++ D P TY++VCR H+ FM GTEKY ET LSK+V WQEKL PL++ Q+ FDI YG ++ R ++G + S K D ++N + E ++ V F +V GK++F+VCRLFLASLQLANNGNV L H N ++ PFQ++LLT N
Sbjct: 3 EGRFQHLLQPIRDLSKNWNIDLATELEEYMDKLDSLNIAFDPSDAASGASFGASGDXXXXXXXXARVMNFAEAALLIQGTSVIYSRKVEYLHALVFQTLSHLTRQQEDEHKSGXXXXXXXXXXXXXXXAASVLANPLPLYDELEEAKPAQITLK--------RAKQEDEXXXXA---------------DRRGRKAGRRDAAALTKSKNNIQASIALMGSLVPDERDHGDTFKLLSC--------------NLHASGVLLLDEASKKYLGA--QQRAVGDQPLAFGETPGRNGGVWRAADGSDPSAALNFDDLDQNDDDNE-----DHGFENEPDYDFDGGELDQDTGGP----------SEVQQGEAGAEQAPQRPTRMVAVPTDEK---DPWAPLDAYDASTSVARPFRKGRSYPRVPVYKKKKGVAALSNKSGAVGIQEDDAELDGLADPAFQERFFLGSGGPQWTSWVWTETATENPLEKTCKRTFCRAPLLA---KSCDALWTREAKWRSAMRRCEAREQQSA---QAMLLREQAMEEE------------------------EDGEQDQQMHAMTLHSATARLDLAFRNDANGNNDEEEDDGDDFDNGFDGGDWDQGAGLDDPTGSYEAAAMAAGASDGPLTYEEVCRQHLATFMSGTEKYVRETDLSKQVSDWQEKLTPLLKQQDAHPPFDIQHYGREIIGR----------------LEGEHRSDSIEKHQKMTR----------RDKKTNKRAKLDPVEEEVEAVPFETLVDGKQQFEVCRLFLASLQLANNGNVALSHAKNVSDHGRVPFQMQLLTTAN 718 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig20.4428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig20.4428.1 >prot_P-fluviatile_contig20.4428.1 ID=prot_P-fluviatile_contig20.4428.1|Name=mRNA_P-fluviatile_contig20.4428.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=845bp MSSLAKSDREERYKHLIQPIRDLAQNWDVDIAASLEDYLEDLEEITITLDback to top mRNA from alignment at P-fluviatile_contig20:2444979..2456307+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig20.4428.1 ID=mRNA_P-fluviatile_contig20.4428.1|Name=mRNA_P-fluviatile_contig20.4428.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11329bp|location=Sequence derived from alignment at P-fluviatile_contig20:2444979..2456307+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig20:2444979..2456307+ >mRNA_P-fluviatile_contig20.4428.1 ID=mRNA_P-fluviatile_contig20.4428.1|Name=mRNA_P-fluviatile_contig20.4428.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5070bp|location=Sequence derived from alignment at P-fluviatile_contig20:2444979..2456307+ (Porterinema fluviatile SAG_2381)back to top |