mRNA_P-fluviatile_contig20.4415.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig20.4415.1
Unique NamemRNA_P-fluviatile_contig20.4415.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig20.4415.1 vs. uniprot
Match: D7FKW4_ECTSI (Chloroplast 50S ribosomal protein L15 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW4_ECTSI)

HSP 1 Score: 388 bits (996), Expect = 1.670e-130
Identity = 196/232 (84.48%), Postives = 209/232 (90.09%), Query Frame = 1 
Query:   25 MKATIATAVLFLLGTANAFLAPTAFTGQRPNTGVNRTPSRMATGVTMKIFDWKRRESHDGLVLDRVAVDTLKPAPGSRQREKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTALYRRIPKLVGRPMGPGHTKKEFNLIKLSALNGLDEGSIVNFETLRAAGEVTKTKHRWHKVVGGEELETTGLTVQAHGFTKTAVEAIESKGGKCELLSPTTNMVLSDDGEED 720
            MKAT+AT  LF +G ANAF APTAFTGQ+   G +  PSR  TGVTMKIFDWKRRES DGLVLDRVAVDTLKPAPGSRQR KRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQ  LYRR+PKLVGRPMGPGHTKK+FNLIKL ALNGLDEG+ VNFE+LRAAG+VTKTKHRWHKVVGG ELETTGLTVQAHGFTK+AVEAIE+KGGKC+LLSPTTN VLS D EE+
Sbjct:    1 MKATLATTALFCVGVANAFFAPTAFTGQQLTAGTS-APSRTTTGVTMKIFDWKRRESEDGLVLDRVAVDTLKPAPGSRQRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDALNGLDEGATVNFESLRAAGKVTKTKHRWHKVVGGMELETTGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNEVLSMDEEEE 231
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BLAST of mRNA_P-fluviatile_contig20.4415.1 vs. uniprot
Match: A0A835Z4H5_9STRA (Chloroplast 50S ribosomal protein L15 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4H5_9STRA)

HSP 1 Score: 257 bits (657), Expect = 1.460e-79
Identity = 135/219 (61.64%), Postives = 162/219 (73.97%), Query Frame = 1 
Query:   46 AVLFLLGTANAFLAPTAFTGQRPNTGVNRTPSRMATGVTMKIFDWKRRESHD-GLVLDRVAVDTLKPAPGSRQREKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTALYRRIPKLVGRPMGPGHTKKEFNLIKLSALNGLDEGSIVNFETLRAAGEVTKTKHRWHKVVGGEELETTGLTVQAHGFTKTAVEAIESKGGKCELLSPTTNMVL 699
            A L +   ++AF A +AF GQ     +     + ++ ++MKIFDWKRRES    L +  ++  TL P+PGSR R+ RKGRGI+AGQGASCGFGMRGQ+SRSGPGVRAGFEGGQ  LYRR+PK VGRPMGPGHTKKEF+LI L ALN   EG+ V+FETL   G +TKT  RWHKVVG  EL   GLTVQAH FT +A EAIE+ GGKC+LLSPTTN ++
Sbjct:    9 ACLVIAAVSDAFTA-SAFHGQ----ALCAATGKASSSISMKIFDWKRRESDSFNLAVTELSPATLTPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGATVSFETLHEQGTLTKTSLRWHKVVGNGELNVRGLTVQAHAFTGSAKEAIENAGGKCQLLSPTTNEIV 222
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BLAST of mRNA_P-fluviatile_contig20.4415.1 vs. uniprot
Match: A0A836CHQ3_9STRA (Chloroplast 50S ribosomal protein L15 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ3_9STRA)

HSP 1 Score: 256 bits (654), Expect = 4.240e-79
Identity = 132/222 (59.46%), Postives = 160/222 (72.07%), Query Frame = 1 
Query:   37 IATAVLFLLGTANAFLAPTAFTGQRPNTGVNRTPSRMATGVTMKIFDWKRRESHDG-LVLDRVAVDTLKPAPGSRQREKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTALYRRIPKLVGRPMGPGHTKKEFNLIKLSALNGLDEGSIVNFETLRAAGEVTKTKHRWHKVVGGEELETTGLTVQAHGFTKTAVEAIESKGGKCELLSPTTNMVL 699
            +A  +  ++  A+A++A +AF GQ     V     + +  V+MKIFDWKRR+       +  ++  TL P+PGSR R+ RKGRGI+AGQGASCGFGMRGQ+SRSGPGVRAGFEGGQ  LYRR+PK VGRPMGPGHTKKEF+LI L ALN   EGS V+FETL   G +TKT  +WHKVVG  EL    LTVQAH FT +A EAIE  GGKC+LLSPTTN ++
Sbjct:    6 VAACLALVVAVADAWVATSAFNGQ----AVGTHTCKASNAVSMKIFDWKRRDDDSANTAVKELSPATLVPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGSTVSFETLHEQGTLTKTSLKWHKVVGNGELNVKNLTVQAHAFTGSAKEAIEGAGGKCQLLSPTTNEIV 223
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BLAST of mRNA_P-fluviatile_contig20.4415.1 vs. uniprot
Match: A0A1E7FLQ7_9STRA (Ribosomal protein L15 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FLQ7_9STRA)

HSP 1 Score: 236 bits (603), Expect = 2.300e-71
Identity = 123/230 (53.48%), Postives = 156/230 (67.83%), Query Frame = 1 
Query:   25 MKATIATAVLFLLGTANAFLAPTAFTGQRPNTGVNRTPSRMATGVTMKIFDWKRRESHDGLVLD----RVAVDTLKPAPGSRQREKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTALYRRIPKLVGRPMGPGHTKKEFNLIKLSALNGLDEGSIVNFETLRAAGEVTKTKHRWHK-VVGGEELETTGLTVQAHGFTKTAVEAIESKGGKCELLSPTTNMVL 699
            M   ++  ++ L G   +  A + F G    T V  T +    G+TMK++DWKRR++ +  + D       +D L+PAPGSR+   RKGRGIAAGQGA+CGFGMRGQKSRSG   R GFEGGQT LYRR+PK  GRPMGPGH+KK++N+IKL  LN +D GS+ NFE+L  AG VTK+K+  HK VVG ++     +TVQAH FTKTA  AIE  GGKCELL P+T  V+
Sbjct:    1 MMKNVSIVLIALAGLVASSDAFSTFMGSSLRTSVPTTNAGNGDGMTMKLYDWKRRDADESAINDVESFEFTLDNLRPAPGSRKSRTRKGRGIAAGQGATCGFGMRGQKSRSGRPTRPGFEGGQTPLYRRLPKFTGRPMGPGHSKKQYNIIKLDQLNNVDSGSVCNFESLFTAGSVTKSKYDTHKIVVGKDDFTAKDITVQAHAFTKTARTAIEDAGGKCELLKPSTGEVI 230
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BLAST of mRNA_P-fluviatile_contig20.4415.1 vs. uniprot
Match: A0A7S1BF06_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BF06_9STRA)

HSP 1 Score: 236 bits (602), Expect = 2.420e-71
Identity = 122/189 (64.55%), Postives = 141/189 (74.60%), Query Frame = 1 
Query:  148 ATGVTMKIFDWKRRESHDGLVLDR----VAVDTLKPAPGSRQREKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTALYRRIPKLVGRPMGPGHTKKEFNLIKLSALNGLDEGSIVNFETLRAAGEVTKTKHRWHKVVGGE-ELETTGLTVQAHGFTKTAVEAIESKGGKCELLSPTTNMVL 699
            ATG TMK+FDWKRRE+ +  + D       +D LKPAPGSR R+KRKGRGIAAGQGA+CGFGMRGQKSRSG   RAGFEGGQ  LYRR+PK VG+PMGPGH+K  +NLIK   +NG  EGS V+F +L  AG+VTK K+  HKVV G+ E    G+TVQAH FT +A  AIE  GGKCELLSPTT  VL
Sbjct:   34 ATGPTMKVFDWKRREADESAINDAETFVFTLDNLKPAPGSRHRKKRKGRGIAAGQGATCGFGMRGQKSRSGRPTRAGFEGGQQPLYRRLPKFVGKPMGPGHSKTVYNLIKTDEINGAAEGSTVSFGSLFEAGDVTKAKYGIHKVVTGKKEFSAKGVTVQAHAFTNSARAAIEGAGGKCELLSPTTGAVL 222
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BLAST of mRNA_P-fluviatile_contig20.4415.1 vs. uniprot
Match: A0A7S1BKP2_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKP2_9STRA)

HSP 1 Score: 234 bits (597), Expect = 1.340e-70
Identity = 122/197 (61.93%), Postives = 144/197 (73.10%), Query Frame = 1 
Query:  124 VNRTPSRMATGVTMKIFDWKRRESHDGLVLDR----VAVDTLKPAPGSRQREKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTALYRRIPKLVGRPMGPGHTKKEFNLIKLSALNGLDEGSIVNFETLRAAGEVTKTKHRWHKVVGGE-ELETTGLTVQAHGFTKTAVEAIESKGGKCELLSPTTNMVL 699
            V++  S   + +TMK+FDWKRRE+ +  + D       +D LKPAPGSR R+KRKGRGIAAGQGA+CGFGMRGQKSRSG   RAGFEGGQ  LYRR+PK VG+PMGPGH+K  +NLIKL  LNG  EGS VNF +L  +G++TK+K   HKVV G+ E    GL VQAH FT +A  AIE  GGKCELLSPTT  VL
Sbjct:   26 VSQHVSTSTSSLTMKVFDWKRREADESAINDAENFVFTLDNLKPAPGSRHRKKRKGRGIAAGQGATCGFGMRGQKSRSGRPTRAGFEGGQQPLYRRLPKFVGKPMGPGHSKTVYNLIKLDELNGAAEGSTVNFASLFESGDITKSKVGIHKVVTGKKEFTAKGLIVQAHAFTSSAQTAIEGAGGKCELLSPTTGAVL 222
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BLAST of mRNA_P-fluviatile_contig20.4415.1 vs. uniprot
Match: A0A7S2W8A4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8A4_9STRA)

HSP 1 Score: 228 bits (582), Expect = 2.510e-68
Identity = 118/185 (63.78%), Postives = 138/185 (74.59%), Query Frame = 1 
Query:  157 VTMKIFDWKRRESHDGLV--LDRVA--VDTLKPAPGSRQREKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTALYRRIPKLVGRPMGPGHTKKEFNLIKLSALNGLDEGSIVNFETLRAAGEVTKTKHRWHKVVGGEELETTGLTVQAHGFTKTAVEAIESKGGKCELLSPTTNMVL 699
            +TMK+FDWKRRE+ +     +D V   +D L+PAPGS++ + RKGRGIAAGQGA+CGFGMRGQKSRSG   R GFEGGQT LYRR+PK VG+P+GPGH + ++N IKL  LN L EGS VNFE LR A  + K +   HKVVGG EL T  LTVQAH FT TA EAIES GGKC  LSPTTN+ L
Sbjct:   44 LTMKVFDWKRREADESAFANVDSVVFTMDNLRPAPGSKKSKTRKGRGIAAGQGATCGFGMRGQKSRSGRPTRPGFEGGQTPLYRRLPKYVGKPLGPGHKRTQYNPIKLELLNSLPEGSTVNFEALREAKALPKCRFDLHKVVGGGELTTKSLTVQAHAFTGTAREAIESNGGKCVTLSPTTNLPL 228
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BLAST of mRNA_P-fluviatile_contig20.4415.1 vs. uniprot
Match: A0A7S2K337_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K337_9STRA)

HSP 1 Score: 226 bits (575), Expect = 2.270e-67
Identity = 113/188 (60.11%), Postives = 137/188 (72.87%), Query Frame = 1 
Query:  151 TGVTMKIFDWKRRESHDGLVLD----RVAVDTLKPAPGSRQREKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTALYRRIPKLVGRPMGPGHTKKEFNLIKLSALNGLDEGSIVNFETLRAAGEVTKTKHRWHKVVGGEELETTGLTVQAHGFTKTAVEAIESKGGKCELLSPTTNMVLS 702
            + + MK++DWKRRE+ +  + D       +D +KPAPGSR+R  RKGRGI+AGQGA+CGFGMRGQK+RSG   R GFEGGQ  LYRR+PK VGRP GPGH K  +N IKLS LNG  EGS VNF++L      TK+K+  HK+VGG EL   GLTVQAH FTK+A EAIE+ GGKCELL  TT  V++
Sbjct:   36 SNLNMKLYDWKRREADESAINDVENFEFTLDNIKPAPGSRKRFTRKGRGISAGQGATCGFGMRGQKARSGRPTRPGFEGGQQPLYRRLPKFVGRPTGPGHEKTIYNTIKLSELNGAAEGSTVNFDSLFETKATTKSKYSIHKIVGGTELTAKGLTVQAHAFTKSAREAIEASGGKCELLKATTGEVIA 223
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BLAST of mRNA_P-fluviatile_contig20.4415.1 vs. uniprot
Match: A0A7S2V549_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V549_9STRA)

HSP 1 Score: 226 bits (575), Expect = 3.340e-67
Identity = 129/229 (56.33%), Postives = 161/229 (70.31%), Query Frame = 1 
Query:   49 VLFLLGTANAFLAPTAFTGQRPNTGVNRTPSRMATGVTMKIFDWKRRESHDGLVLDRVAVDT-LKPAPGSRQREKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTALYRRIPKLVGRPMGPGHTKKEFNLIKLSALNGLDEGSIVNFETLRAAGEVTK----TKHRWH-------KVVGGEELETTGLTVQAHGFTKTAVEAIESKGGKCELLSPTTNMVL 699
            +L +LG A AF +P++F GQ+    + R        V+MKI+DWK R+ +   + +     T L+PAPGS +R KRKGRGIAAGQGASCGFGMRGQKSRSG  VR GFEGGQT LYRRIPK+ GRPMGPGH K E+ L++ + L+G++EGS VNFE+LRAAG++ K    TKH+ +       KVVGG +L T GLTVQAH FT +A +AIE  GGKC +LS TTN  L
Sbjct:    8 LLAILGAAVAF-SPSSFGGQQ----LARVQGTSTNTVSMKIYDWKNRQKNWKHIDEVEFTHTNLRPAPGSTKRHKRKGRGIAAGQGASCGFGMRGQKSRSGKSVRPGFEGGQTPLYRRIPKIRGRPMGPGHQKIEYALMQFNFLDGVEEGSTVNFESLRAAGKMPKQGKRTKHKRNSGNHQLIKVVGGRDLNTKGLTVQAHAFTASAKKAIEEAGGKCVVLSKTTNKPL 231
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BLAST of mRNA_P-fluviatile_contig20.4415.1 vs. uniprot
Match: R7QRC1_CHOCR (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRC1_CHOCR)

HSP 1 Score: 225 bits (573), Expect = 1.070e-66
Identity = 123/213 (57.75%), Postives = 148/213 (69.48%), Query Frame = 1 
Query:  109 RPNTGVNR--TPSRMATGVTMKIFDWKRRESHDGLVLDRVAVD-------TLKPAPGSRQREKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQTALYRRIPKLVGRPMGPGHTKKEFNLIKLSALNGLDEGSIVNFETLRAAGEVTKTKHRWHKVVGGEELETTGLTVQAHGFTKTAVEAIESKGGKCELLSPTTNMVLSDDGEED 720
            RP+T V+   TP       T K+FDWK+R+  D    D    D        L+PAPGSR+R+KRKGRG +AGQG SCGFGMRGQKSRSG GVR GFEGGQT LYRRIPK VGRPMGPGH K E+ L+K+  LNG +EGS+V FE L+A G +TK K + +KVVGGE+L    LTV+AH FT +AV+AIE  GG C L+SPTT   +  + EED
Sbjct:   32 RPSTAVSARVTP-------TAKLFDWKKRQ--DATYADLPPEDEGIFTLTNLRPAPGSRKRKKRKGRGHSAGQGGSCGFGMRGQKSRSGRGVRPGFEGGQTPLYRRIPKFVGRPMGPGHKKTEYALMKIEFLNGCEEGSVVTFEGLKAMGIMTKQKRKIYKVVGGEDLTVKNLTVKAHAFTTSAVDAIEGAGGTCVLVSPTTGKDIVFEEEED 235
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig20.4415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKW4_ECTSI1.670e-13084.48Chloroplast 50S ribosomal protein L15 n=1 Tax=Ecto... [more]
A0A835Z4H5_9STRA1.460e-7961.64Chloroplast 50S ribosomal protein L15 n=1 Tax=Trib... [more]
A0A836CHQ3_9STRA4.240e-7959.46Chloroplast 50S ribosomal protein L15 n=1 Tax=Trib... [more]
A0A1E7FLQ7_9STRA2.300e-7153.48Ribosomal protein L15 n=1 Tax=Fragilariopsis cylin... [more]
A0A7S1BF06_9STRA2.420e-7164.55Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1BKP2_9STRA1.340e-7061.93Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S2W8A4_9STRA2.510e-6863.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2K337_9STRA2.270e-6760.11Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2V549_9STRA3.340e-6756.33Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
R7QRC1_CHOCR1.070e-6657.75Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig20contigP-fluviatile_contig20:2328713..2334626 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score389.4
Seed ortholog evalue1.2e-105
Seed eggNOG ortholog2880.D7FKW4
Preferred namePRPL15
KEGG koko:K02876
KEGG Pathwayko03010,map03010
KEGG ModuleM00178,M00179
GOsGO:0000311,GO:0000313,GO:0000315,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009547,GO:0009570,GO:0009719,GO:0009725,GO:0009735,GO:0009941,GO:0009987,GO:0010033,GO:0010467,GO:0015934,GO:0019538,GO:0031967,GO:0031975,GO:0032991,GO:0034641,GO:0034645,GO:0042221,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsCOG0200@1,KOG0846@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Hectar predicted targeting categorychloroplast
Ec32 ortholog description50S ribosomal protein L15, chloroplast
Ec32 orthologEc-17_001600.1
Exons6
Model size1575
Cds size699
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig20.4415.1prot_P-fluviatile_contig20.4415.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig20 2329565..2334602 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815918.3752825-UTR-P-fluviatile_contig20:2328712..23295641622815918.3752825-UTR-P-fluviatile_contig20:2328712..2329564Porterinema fluviatile SAG_2381UTRP-fluviatile_contig20 2328713..2329564 -
1693563726.6174934-UTR-P-fluviatile_contig20:2328712..23295641693563726.6174934-UTR-P-fluviatile_contig20:2328712..2329564Porterinema fluviatile SAG_2381UTRP-fluviatile_contig20 2328713..2329564 -
1622815918.4612157-UTR-P-fluviatile_contig20:2334602..23346261622815918.4612157-UTR-P-fluviatile_contig20:2334602..2334626Porterinema fluviatile SAG_2381UTRP-fluviatile_contig20 2334603..2334626 -
1693563726.6785998-UTR-P-fluviatile_contig20:2334602..23346261693563726.6785998-UTR-P-fluviatile_contig20:2334602..2334626Porterinema fluviatile SAG_2381UTRP-fluviatile_contig20 2334603..2334626 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815918.390141-CDS-P-fluviatile_contig20:2329564..23296781622815918.390141-CDS-P-fluviatile_contig20:2329564..2329678Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 2329565..2329678 -
1693563726.6267078-CDS-P-fluviatile_contig20:2329564..23296781693563726.6267078-CDS-P-fluviatile_contig20:2329564..2329678Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 2329565..2329678 -
1622815918.4057097-CDS-P-fluviatile_contig20:2330000..23300761622815918.4057097-CDS-P-fluviatile_contig20:2330000..2330076Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 2330001..2330076 -
1693563726.6342638-CDS-P-fluviatile_contig20:2330000..23300761693563726.6342638-CDS-P-fluviatile_contig20:2330000..2330076Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 2330001..2330076 -
1622815918.4167109-CDS-P-fluviatile_contig20:2331073..23311591622815918.4167109-CDS-P-fluviatile_contig20:2331073..2331159Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 2331074..2331159 -
1693563726.643037-CDS-P-fluviatile_contig20:2331073..23311591693563726.643037-CDS-P-fluviatile_contig20:2331073..2331159Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 2331074..2331159 -
1622815918.4276137-CDS-P-fluviatile_contig20:2332471..23327101622815918.4276137-CDS-P-fluviatile_contig20:2332471..2332710Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 2332472..2332710 -
1693563726.6529639-CDS-P-fluviatile_contig20:2332471..23327101693563726.6529639-CDS-P-fluviatile_contig20:2332471..2332710Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 2332472..2332710 -
1622815918.4375353-CDS-P-fluviatile_contig20:2333988..23341231622815918.4375353-CDS-P-fluviatile_contig20:2333988..2334123Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 2333989..2334123 -
1693563726.6614192-CDS-P-fluviatile_contig20:2333988..23341231693563726.6614192-CDS-P-fluviatile_contig20:2333988..2334123Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 2333989..2334123 -
1622815918.4473252-CDS-P-fluviatile_contig20:2334553..23346021622815918.4473252-CDS-P-fluviatile_contig20:2334553..2334602Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 2334554..2334602 -
1693563726.6700802-CDS-P-fluviatile_contig20:2334553..23346021693563726.6700802-CDS-P-fluviatile_contig20:2334553..2334602Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 2334554..2334602 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig20.4415.1

>prot_P-fluviatile_contig20.4415.1 ID=prot_P-fluviatile_contig20.4415.1|Name=mRNA_P-fluviatile_contig20.4415.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=233bp
MKATIATAVLFLLGTANAFLAPTAFTGQRPNTGVNRTPSRMATGVTMKIF
DWKRRESHDGLVLDRVAVDTLKPAPGSRQREKRKGRGIAAGQGASCGFGM
RGQKSRSGPGVRAGFEGGQTALYRRIPKLVGRPMGPGHTKKEFNLIKLSA
LNGLDEGSIVNFETLRAAGEVTKTKHRWHKVVGGEELETTGLTVQAHGFT
KTAVEAIESKGGKCELLSPTTNMVLSDDGEED*
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mRNA from alignment at P-fluviatile_contig20:2328713..2334626-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig20.4415.1 ID=mRNA_P-fluviatile_contig20.4415.1|Name=mRNA_P-fluviatile_contig20.4415.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5914bp|location=Sequence derived from alignment at P-fluviatile_contig20:2328713..2334626- (Porterinema fluviatile SAG_2381)
CGTGGAGGGAGAGGATACTTAACCATGAAGGCTACCATTGCGACCGCCGT
GCTCTTCCTACTGGGCACCGCCAGTGAGTGTTGTGCATTCGCGGTTGTGA
AAACCGCCGTGTACGTAAGGGGGATGTTGCGACCACACGACTTGCACTTG
GAAGAGACGAAGAGACGCGGAGTGCGTGCCATATTCGTGTCGCTGTCTCC
CAGCCACCAGTCCGGCCTTGACAGTTGGAACCTGTTCCCCATTCAACTCC
TTCCCAGCGTTGACTGTATGATAGGTATCGCACAGAGCCAGCGTTAATTA
TCTCCAAAAAGGGCTGGCGCCAGCGTGAGGATGAGGTTGACTTGACTCAA
ACTCATGATACTTTCAATTTCGCGCATGATTTTCATCAACGAAGAGGCAG
CCAACAGGCAGCACGAGATACACAGCAGAGAGAGAGTAAAGCAAGAAAAA
GCCTCAACGTGTTTCTTCGGCCGCCCTGCTCCCCCGTCGTCCTTTCCCTC
CAGATGCATTCTTAGCTCCCACTGCCTTCACCGGCCAGCGGCCGAACACT
GGCGTTAATCGTACGCCATCGCGTATGGCGACCGGCGTCACCATGAAAAT
ATTCGACTGGAAACGGAGAGAAAGCCATGACGGTCTAGGTAAGCCACGGG
CTAGGCTTCCTGTGCGTTTAACAACGTGAAGCGGTTGTACGTTTCTGTCA
TTGAACTTGTCGATACACCAATTTCGGCGTCCGAAGCCGGCGCAGTTCCC
CTCCTGATAAAACTCTTCATGTCCCTCCCACTTTGATGGGTTTTCCGTCT
GCCTGTGGCTGCGTGTATCACGTCCGGGCGCAGTAATGCTGGTCCATGTG
CAACTTTGAAGTCTTCTTCATTAACCCTATCTCGCGCTGCATGCGCTCGT
CACACACTGACCCTCAAACACACGATTGGGGGCTCGGTGGATGCATGGCG
AAGACGAAGATTGGGTAATAAAACCATCTATTTCGACCTCCACTATATCG
TTACTCCTCTCTTTGATTTTTGCATCGCGCGAGGGAGCGGACCCCCGCTT
CACGCATCCCTTCCTAGTAGACAGGTTGGCGAAAAAAGCTCCACAGAACT
AGGGCAAGGTGGACGGTGGACGGTGGACGGTACGACAGAGGCTCTGCGGA
ACGTTGCTGAACTATTCGAGTGTAGGTCGCTGAATAATGCGACGAAAATG
CAAGTGGGACGGACCACGTTTGTTTCCCCCCTGCCCTCAACACGAAATGG
GATTTTGGTCCCAACCACTGCTGTGTGTTTTTTTACGAGGCTTTTGCTAT
GCGCCTGCGTGAGATGGGCCTTCGGAGTGTCGGGAAATGAAATTAGTTTT
CGCCCTCCAACACACCAACGCACTCCAATCGCCTTCACACGTTGAAGACA
CGAAATTCAGGTTTGCAGTATCGATCTTACGCCTGTGTTTGCACACACGT
GCGCAAGAACGGGAAGCAGCAACAGCAGCAGCAGCAACAGTTTTCAACAT
CGTCAGCACAGCGCACAGCTATTAGCCGCAGAAGGCGTGGAAAACTTCTC
CCCACTGGCTCATGCAAACAAATGAGCCAGAGATTTTTGTGTGCAATTGT
TGGAAGTAAACGGAGGGCCTAGGCCACGTTTCAGATTGGAGCGTTTCGCG
GAAAGAAAACATTACTCCCTCACCACCTTATCCCTGGGGACATGCAAGTA
AAAAAAACGAAACTCTCCTCCGTATCTCCCGATTAAAACAGATTTCGGTA
TTTCAGGCAATTTGGGAATGTTTGAGGCATCTCAACGCACAAACACGATT
TTACGTGCTAGGGGTGGAACTAGTTATGGGCGTTCGGCACAACGAATACG
ACACGTTTTTTCAACGACAACGAATGGTGTCGGCGGCGCGCATTGTGTTT
TGTGCTTTGATCGCAGTCCTGGACAGGGTAGCGGTGGACACCCTCAAGCC
TGCGCCTGGATCGCGCCAACGCGAGAAGCGGAAAGGGCGTGGTATCGCTG
CTGGACAGGGAGCATCCTGCGGTTTTGGTATGAGAGGCCAAAAGTCGCGC
TCGGGTCCTGGAGTTAGGGCAGGATTCGAGGGAGGACAAACAGCTCTCTA
CCGCCGCATTCCCAAGCTGGTTGGACGCCCGATGGGCCCCGGTCACACGA
AGAAGGTCAGTCACGTCATTTCCAGTGCGCGCTTGAGCGATGGTTATGTT
GACGGAGGTGTATTACGGGCGCCGCTGAATCGGTCTGGGTTTGTCATGGA
GGGTCATCGAATTGTTCGTGAGTGGTGTGGCTCTTTGGATAACAGCAGGT
GCTGTTGAACAGACAATCCCCCCTTCAAAGCATCGTTAAAATCAAAATGA
TGTCGAGAAACACGACAGGGTCAGGCGAAGAAGACGACGATTGCTACAAA
TGTCAGACAGTCCCTCCAGATGGATCTGCTTAAAAACCATTGAGCAATGC
ATGTGTCCCATTTCATCAAGGCTCCGCGCTGCCCTTTTCACTGATTTTTG
GAGCAGCAGCTAGTGTGACACACGAGGACGGTCCCAGAGGATTTTGTTCC
TCTTTTCCTCACCTTCTACTTCGGGTTCTTGTTTGATTTGATATCGAGGA
GGGTGAATGGTTCAGCCGTCCCTTTCCCGCATCGACAGGTACGTCTAGTG
GGGTTTGTGCACGAAGCAAGCGTTGTTCTCCACGGTTAGATTTAACTTCA
CCGCTAGCGAAAAAGTCAGTTTTTTTTCTTCACCGATCGATACCATAACG
TAACTGCCACTAGGTCTCGGAGGCGCTACCTGAACAGCGGGAGCGACTGC
CCTAGACGAATATGGATTGATGTTTTGCCAGCTTTAGCTGGTGTTCGTCC
GTCGCATGGGCAATTTGTGCACCTTCAATCCTTCAGTTGGCGGGGTCGCT
GAAGCATGGTCCTTACAGTCTCCCACATGTTGGGTGGCACTCTTCGGGGG
CAACATAATGGTGTAATTCCCGACTTTTGGTTCAGCTTGGGGGCCGTGGC
CTTTCCCTGCTTTCTGCTTCGGTCTTTCTTAAACGCGCTATCCAAATCGA
CGGATACTCCACTTCACGACTCAATTTTCCTCATTTACTATTCCGCTGAG
TGCCCACCACAAAAAGCACGAAGGCACGAGGTATGGTGCCAACTACTGCG
CTACGCCCCAATTTTGCACCCCGTATTCCAAAAGATTGACTGCGCGAAAC
CTCCGGTGAAATTATCGCGGCACGCAGCGATATGGATATGAATACCCTGA
AAATTTGACCCACTTTCACACGATCGATGGTTCACCTCCGTCTACGTATG
CTTCTGTTATTCTGTCATCCTTTTCCATTTGGTCTTCTTGCCCATAATAT
TTCCGTAAGAATCGCAAATGTATTTTCGATGTCACGATGCCAAGAACGGT
CGGGCTGATTGAGTGACCGCCCTTTCCGGTCTTGTTACCCTCTCCGCTTC
TTCCGTCCCGGTCGCAGGAATTCAACCTGATCAAGCTGAGCGCTCTCAAT
GGGTTGGACGAAGGCTCCATAGTTAACTTCGAAACACTTCGCGCAGCCGG
TGAGTCACAGTCAAGGTCAGAATTTTGAGAGACTGCGATGTCGTAGACTA
CACTAGGCGGGAGAGTTTCGACCGTGAGACAGGAAGCAGAATAGGCGGAG
AAGTGATAATCGAACGGGGACAAGCGTAGTAGGTAGAGGTCTGAAAGGTT
ATTCAAGGTGTTGCGTTGCACTTTCTCAGATGAAGTTTGAAGTCGCTGAG
CAATTCAAAATGATTAAGGCTCGGGATGTCGATCTCGTCGTTATTGTCCA
TTAATCCCGTTCAAGTACCCGCTGATTTGCATGACGAGATGTGTGGCTTG
CAATCTACGCCAAGCGTTTTGTTTGAACACACGCTGCAATACGTGGTTGT
CGCTGTGATTCAAATCGTGCCCTGATTCGTGACTTCGCTGTAGGATCTTT
GTTTGGGAGGGGGGGACGCCCCGCGAAATAGACTTATGTATGTCCGTAGT
TGTGTTTTTCCTTGACGCATAGGCTTCTTTGACTTGGCGTCATCGTTCGG
TTGGCTCTCCAAGCAGGTTTGTTCGTTTACGTCATGTCAGGGGTTGTTTG
TTCCACGTATCACGCGGTTGTGGCAAAAGTCAAATGCTAAATAGCGTTCT
TGCGAGTAGCAAGTTATGTGCATCGTTGCGTTCGTGCTCATATGCTTCCG
TGTTGCATCCAGTACACGGTTGAGTCGAATGTACATCTCTGTCTGCTTCG
ATCTTATGTCCTGGTCCGGATTGATGACACCAAAAGGTCCTGAGGCGTCC
GAACAACCGTAAACAATATCCACCAGTATTGAAACGGAACGCTGTCGCTG
CAGCGTGTTATGTCGATTGCTCGTCAAGTAAGCAACAAAATGCCCACGTG
CGGAAGTGAGGGAAACAGGATCGCCCAAGCATGCTGCGATCTACAAGCCA
AACGGGCAAGGTAGACAAGAAGCCTGCACGTGGGTGACTAGCGAACATGG
ACGAATACCCGCCTTCTCTTGACTGTTTTGAAATGCTGAAAAGCAGGTAG
AGTCACGAAAACCAAGCACAGGTGGCACAAGGTCGTAGGAGGAGAGGAGC
TGGAGACGACCGGGCTAACAGTACAGGTACCGAGACTAGTACTTGAGTAT
GGTGAAAGGGGTGATGTCTAGGTACCCCTCACGACATGTTGCGATCACTG
GAAAATGAAGGGTAGAAAATAGAAGAGTAGATAGATACCGGACCAGGAAA
GCAGGTCTTGTGCTCCATTTATCCTAGTCGAAACCTCGTCGCGATCCTGG
TAAAAGACGTCTCGTATGAAGCGGGCGTTGATAGCAACATTGATCACCAA
AGCTAATTTTTGCGATCAAGTCTTGACTGCTTTGACCGCGACGCTTTGCG
TTTCGTCGTCTCTTCCCGTTTGATGATTGGGCACTCTTACGTCATCAGGC
CCATGGATTCACGAAGACCGCCGTCGAGGCGATCGAGTCCAAGGGCGGGA
AATGTGAACTTCTTTCCCCAACTACAAACATGGTTCTGTCAGACGACGGG
GAGGAGGATTAGAGCAGCAGCTTCTTCTTGGCTTGGAGGGGTGAATTTGC
CGATATATGTGCGTGTAGTTTTGGTGTGCGTTTCGCTCTTGTTTCGTGAA
TGGGATAGAAACGACAGGTGTTTGAAGATTTTGATGATTGCAGGGCGTGC
ACACTGAAAGGTGAATGTGCAGGCTGGGCATGTTTTCCAGTTTTTTGCGA
TCACGTGCGGGGGGGGGGGGGCGTATTCTAGTTTGGATGCGATCACCGCG
TTGTGCATGAAGCAGGTGTCGCTGCTGATTTCAACAATTTCGGCCTGGTT
TCGGCCTGCAAGCCCGTCTCTTTTTTCTCACTGATGATATTCGAAAGGTT
GCGGAAGGCTGGTAAACGGGTAGACCGAGCAGGGCGAGAAAAGATGAATT
AACACACTCATCGCCGTTTACCGCAGAGACCAGGCGAATGCCCTGCGGGA
GCATCGGAAACAAACGTTGTGTAGGCGCCCCAGGGACGTTCGCAAGGTTC
GCGGGGCGTTCGATCCGTAGCCGAGGCTAGCTCTCTTTTTCAAAAATAAC
AAGGCGCCCCCGTGGGGTGTAATTCAAGAAGCGGTAGCGTTTGCAATCAT
GGGAGGCAGAACACTCGCGGCACACCTGTTCGCTCTGACGGCCGATACAG
TTCCCACACCAAATGGTTTGCTTACTCCACCGCGATTCATCTTCGCGACC
GTAGTAAACAGAACGCTTCGTTGCCCACGCAGTCGGGGCGGTAAAATAAG
TGCGTAGGGCATTCGCTTCGAATATTTGTAGGTCTTTTCGATCTCTTCAG
CGCACTGGGGTGTTCGATACTGTCTTGACCGCCACGCGTCACTCACTGGC
CACGCGTAGAACAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig20:2328713..2334626-

>mRNA_P-fluviatile_contig20.4415.1 ID=mRNA_P-fluviatile_contig20.4415.1|Name=mRNA_P-fluviatile_contig20.4415.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1398bp|location=Sequence derived from alignment at P-fluviatile_contig20:2328713..2334626- (Porterinema fluviatile SAG_2381)
ATGAAGGCTACCATTGCGACCGCCGTGCTCTTCCTACTGGGCACCGCCAA
TGAAGGCTACCATTGCGACCGCCGTGCTCTTCCTACTGGGCACCGCCAAT
GCATTCTTAGCTCCCACTGCCTTCACCGGCCAGCGGCCGAACACTGGCGT
TAATCGTACGCCATCGCGTATGGCGACCGGCGTCACCATGAAAATATTCG
ACTGGAAACGGAGAGAAAGCCATGACGGTCTAGATGCATTCTTAGCTCCC
ACTGCCTTCACCGGCCAGCGGCCGAACACTGGCGTTAATCGTACGCCATC
GCGTATGGCGACCGGCGTCACCATGAAAATATTCGACTGGAAACGGAGAG
AAAGCCATGACGGTCTAGTCCTGGACAGGGTAGCGGTGGACACCCTCAAG
CCTGCGCCTGGATCGCGCCAACGCGAGAAGCGGAAAGGGCGTGGTATCGC
TGCTGGACAGGGAGCATCCTGCGGTTTTGGTATGAGAGGCCAAAAGTCGC
GCTCGGGTCCTGGAGTTAGGGCAGGATTCGAGGGAGGACAAACAGCTCTC
TACCGCCGCATTCCCAAGCTGGTTGGACGCCCGATGGGCCCCGGTCACAC
GAAGAAGTCCTGGACAGGGTAGCGGTGGACACCCTCAAGCCTGCGCCTGG
ATCGCGCCAACGCGAGAAGCGGAAAGGGCGTGGTATCGCTGCTGGACAGG
GAGCATCCTGCGGTTTTGGTATGAGAGGCCAAAAGTCGCGCTCGGGTCCT
GGAGTTAGGGCAGGATTCGAGGGAGGACAAACAGCTCTCTACCGCCGCAT
TCCCAAGCTGGTTGGACGCCCGATGGGCCCCGGTCACACGAAGAAGGAAT
TCAACCTGATCAAGCTGAGCGCTCTCAATGGGTTGGACGAAGGCTCCATA
GTTAACTTCGAAACACTTCGCGCAGCCGGTGAGAATTCAACCTGATCAAG
CTGAGCGCTCTCAATGGGTTGGACGAAGGCTCCATAGTTAACTTCGAAAC
ACTTCGCGCAGCCGGTGAAGTCACGAAAACCAAGCACAGGTGGCACAAGG
TCGTAGGAGGAGAGGAGCTGGAGACGACCGGGCTAACAGTACAGAGTCAC
GAAAACCAAGCACAGGTGGCACAAGGTCGTAGGAGGAGAGGAGCTGGAGA
CGACCGGGCTAACAGTACAGGCCCATGGATTCACGAAGACCGCCGTCGAG
GCGATCGAGTCCAAGGGCGGGAAATGTGAACTTCTTTCCCCAACTACAAA
CATGGTTCTGTCAGACGACGGGGAGGAGGATTAGGCCCATGGATTCACGA
AGACCGCCGTCGAGGCGATCGAGTCCAAGGGCGGGAAATGTGAACTTCTT
TCCCCAACTACAAACATGGTTCTGTCAGACGACGGGGAGGAGGATTAG
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