mRNA_P-fluviatile_contig20.4404.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig20.4404.1 vs. uniprot
Match: D7FKU7_ECTSI (Casein kinase II subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU7_ECTSI) HSP 1 Score: 293 bits (751), Expect = 1.250e-96 Identity = 142/193 (73.58%), Postives = 161/193 (83.42%), Query Frame = 1
Query: 178 GGYKRSGWIQDFCSKPGNEFFAEVPVSFIRERMNTIEIGRGVDIPYMEEALAVILDERCLNVG-----EASIVESSAALLYGLLHARFLVSPGGLKVLLDMFSKGAFGRCPRVYCQGQAVLPVGETDRPMQSSVKVFCPRCKEIYFPAGNLRTCDGAFFGTTSFALLLLGWPELKKSPSTSVFVPRVFGFKMH 741
GG R WIQDFC PGNEFFAEVP+SFIRE MN+I+IGRGVDIPY +EAL VIL ER + VG AS V+SSAALLYGLLHARFLVSP GLKV+L+ FSK FGRCPRVYCQGQAVLPVGE+DRP QSSVKVFCPRC ++Y+P+G +R CDGAF+GTT LLLLGWPELK +P+TS +VPRVFGFK+H
Sbjct: 32 GGGGRQAWIQDFCRTPGNEFFAEVPLSFIRESMNSIDIGRGVDIPYRQEALGVILGERRIGVGVHGDNNASTVQSSAALLYGLLHARFLVSPQGLKVVLEKFSKADFGRCPRVYCQGQAVLPVGESDRPKQSSVKVFCPRCGDLYYPSGYVRACDGAFWGTTLPHLLLLGWPELKTTPNTSHYVPRVFGFKVH 224
BLAST of mRNA_P-fluviatile_contig20.4404.1 vs. uniprot
Match: A0A7S0VLG2_9CRYP (Casein kinase II subunit beta n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VLG2_9CRYP) HSP 1 Score: 177 bits (448), Expect = 5.360e-51 Identity = 85/188 (45.21%), Postives = 129/188 (68.62%), Query Frame = 1
Query: 199 WIQDFCSKPGNEFFAEVPVSFIRERMNTIEIGRGVDIPYMEEALAVILD-----ERCLNVGEASIVESSAALLYGLLHARFLVSPGGLKVLLDMFSKGAFGRCPRVYCQGQAVLPVGETDRPMQSSVKVFCPRCKEIYFPAGNL-RTCDGAFFGTTSFALLLLGWPELKKSPSTSVFVPRVFGFKMHQ 744
WIQ FCS GNEFF +V F+++ N G G +PY + AL +ILD + L + +VES+A +LYGL+HAR++++ G++ ++D F++ FGRCPRV C GQAVLPVG++D+P + +VKV+CPRC EI++P + R+ DGA+FGTT LL++ P++ S T +VP++FGF++H+
Sbjct: 31 WIQWFCSLQGNEFFTDVAEDFVQDEFNLT--GLGSLVPYYDYALDIILDIESPQDEALTEEQQELVESAAEILYGLIHARYILTQRGMQQMVDKFNRLEFGRCPRVMCDGQAVLPVGQSDQPQKHTVKVYCPRCCEIFYPRSSKNRSTDGAYFGTTFPHLLVMANPDICPS-ETPCYVPKIFGFRLHK 215
BLAST of mRNA_P-fluviatile_contig20.4404.1 vs. uniprot
Match: A0A087SKW6_AUXPR (Casein kinase II subunit beta n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SKW6_AUXPR) HSP 1 Score: 176 bits (446), Expect = 2.650e-50 Identity = 87/189 (46.03%), Postives = 118/189 (62.43%), Query Frame = 1
Query: 193 SGWIQDFCSKPGNEFFAEVPVSFIRERMNTIEIGRGVDIPYMEEALAVILDERCLNV-----GEASIVESSAALLYGLLHARFLVSPGGLKVLLDMFSKGAFGRCPRVYCQGQAVLPVGETDRPMQSSVKVFCPRCKEIYFPAGNLR-TCDGAFFGTTSFALLLLGWPELKKSPSTSVFVPRVFGFKMH 741
S WI FC GNEFF EV ++++ N G G +PY + AL IL+ ++ + +VE +A LYGL+HAR++++ GL + + F G FGRCPRV C GQ LPVG +D P Q++VK+FCPRC+E Y+P L DGA+FGTT LLLL +P L+ + ST FVPR+FGFK+H
Sbjct: 40 STWIHWFCGLKGNEFFCEVEEDYVQDDFNLS--GLGGMVPYYDYALDFILEAESVHTEIMTEAQQEMVEGAAETLYGLIHARYVLTARGLAAMAEKFRAGEFGRCPRVLCHGQPCLPVGVSDLPRQATVKLFCPRCEEAYYPRSRLHGNLDGAYFGTTMAHLLLLTYPALRPTKSTEAFVPRIFGFKIH 226
BLAST of mRNA_P-fluviatile_contig20.4404.1 vs. uniprot
Match: A0A0L0DJK7_THETB (Casein kinase II subunit beta n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DJK7_THETB) HSP 1 Score: 175 bits (443), Expect = 2.670e-50 Identity = 83/186 (44.62%), Postives = 121/186 (65.05%), Query Frame = 1
Query: 199 WIQDFCSKPGNEFFAEVPVSFIRERMNTIEIGRGVDIPYMEEALAVILD----ERCLNVGEASIVESSAALLYGLLHARFLVSPGGLKVLLDMFSKGAFGRCPRVYCQGQAVLPVGETDRPMQSSVKVFCPRCKEIYFPAGNLRT-CDGAFFGTTSFALLLLGWPELKKSPSTSVFVPRVFGFKMH 741
WI+ FCS GNEFF EV FI++ N G +PY E A+ +ILD + + ++E++A +LYGL+HAR++++ GL + D ++ FG+CPRV+C GQAVLPVGE+D P ++VKVFCPRC+ +Y P + DGA+FGTT L+ +PE+ SP+T +VPR++GFK+H
Sbjct: 14 WIRWFCSLRGNEFFCEVDEDFIQDDFNLT--GLSSMVPYYEYAMDMILDCDTPNQMFTEEQQEMIETAAEMLYGLIHARYILTNRGLSAMADKYNHHQFGKCPRVFCNGQAVLPVGESDMPRTNTVKVFCPRCENLYIPRSQRQANIDGAYFGTTFAHLIFHIYPEMMPSPATQEYVPRIYGFKIH 197
BLAST of mRNA_P-fluviatile_contig20.4404.1 vs. uniprot
Match: A0A836BYD2_9CHLO (Casein kinase II subunit beta n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BYD2_9CHLO) HSP 1 Score: 176 bits (446), Expect = 2.890e-50 Identity = 88/196 (44.90%), Postives = 122/196 (62.24%), Query Frame = 1
Query: 199 WIQDFCSKPGNEFFAEVPVSFIRERMNTIEIGRGVDIPYMEEALAVILDER-----CLNVGEASIVESSAALLYGLLHARFLVSPGGLKVLLDMFSKGAFGRCPRVYCQGQAVLPVGETDRPMQSSVKVFCPRCKEIYFPAGNLR-TCDGAFFGTTSFALLLLGWPELKKSPSTSVFVPRVFGFKMHQIGVGCCES 768
WI FCS GNEFF EV +I + N G +PY E AL +ILD L + ++ES+A +LYGL+HAR++V+ GL +L+ F FGRCPR YC+GQA LPVG +D P QS+VK+FCP+C++I++P + + DGA+FGTT LLL+ +P + S +VPR+FGFK+H G E+
Sbjct: 45 WISWFCSLRGNEFFCEVDEEYIEDDFNLS--GLSSQVPYYEYALDMILDNEPPHDVMLTDQQHELLESAAEMLYGLIHARYIVTARGLACMLEKFKNYEFGRCPRFYCEGQACLPVGTSDVPGQSTVKIFCPKCEDIFYPRSEYQCSIDGAYFGTTFPHLLLMTYPMYRPPKSVEQYVPRIFGFKLHPTAYGNREA 238
BLAST of mRNA_P-fluviatile_contig20.4404.1 vs. uniprot
Match: A0A2J8A3W0_9CHLO (Casein kinase II subunit beta n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A3W0_9CHLO) HSP 1 Score: 176 bits (445), Expect = 4.200e-50 Identity = 87/192 (45.31%), Postives = 119/192 (61.98%), Query Frame = 1
Query: 199 WIQDFCSKPGNEFFAEVPVSFIRERMNTIEIGRGVDIPYMEEALAVILDER-----CLNVGEASIVESSAALLYGLLHARFLVSPGGLKVLLDMFSKGAFGRCPRVYCQGQAVLPVGETDRPMQSSVKVFCPRCKEIYFPAGNLR-TCDGAFFGTTSFALLLLGWPELKKSPSTSVFVPRVFGFKMHQIGVG 756
WI FCS GNEFF EV +I + N G +PY E AL +ILD L + ++ES+A +LYGL+HAR++V+ GL +L+ F FGRCPR YC+GQA LPVG D P QS+VK+FCP+C++I++P + + DGA+FGTT LLL+ +P + S +VPR+FGFK+H G
Sbjct: 44 WISWFCSLRGNEFFCEVDEEYIEDDFNLS--GLSTQVPYYEYALDMILDNEPPQDVLLTDQQHELLESAAEMLYGLIHARYIVTARGLACMLEKFKNYEFGRCPRFYCEGQACLPVGTADVPGQSTVKIFCPKCEDIFYPRSEYQCSIDGAYFGTTFPHLLLMTYPMYRPPKSVEQYVPRIFGFKLHPSAYG 233
BLAST of mRNA_P-fluviatile_contig20.4404.1 vs. uniprot
Match: A0A0M0LS08_9EUKA (Casein kinase II subunit beta n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LS08_9EUKA) HSP 1 Score: 181 bits (459), Expect = 1.130e-49 Identity = 88/199 (44.22%), Postives = 125/199 (62.81%), Query Frame = 1
Query: 172 AAGGYKRSGWIQDFCSKPGNEFFAEVPVSFIRERMNTIEIGRGVDIPYMEEALAVILDERCLNVGEAS-----IVESSAALLYGLLHARFLVSPGGLKVLLDMFSKGAFGRCPRVYCQGQAVLPVGETDRPMQSSVKVFCPRCKEIYFPAGNLRT-CDGAFFGTTSFALLLLGWPELKKSPSTSVFVPRVFGFKMHQIG 750
A+G S W+Q FCS GNEFFAEV F+++ N G +PY E AL ++D L S +ES+A LLYGL+HAR++++P G+ +L+ F FGRCPRV+CQGQ LPVG++D P + K+FCPRC++I++P + + DGA+FGT+ L L + EL +P S +VPR+FGFK+H+ G
Sbjct: 16 ASGSDGDSSWVQWFCSLKGNEFFAEVDAEFMQDDFNLT--GLSAQVPYYEYALDTVMDAESLATANFSKEQQESIESAAELLYGLIHARYIITPLGMAAMLEKFKHCHFGRCPRVHCQGQPALPVGQSDLPRMHTTKIFCPRCQDIFYPRSSRQANVDGAYFGTSFCHLFLQSYWELVPTPPVSSYVPRIFGFKIHKSG 212
BLAST of mRNA_P-fluviatile_contig20.4404.1 vs. uniprot
Match: A0A2K3E5T0_CHLRE (Casein kinase II subunit beta n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3E5T0_CHLRE) HSP 1 Score: 174 bits (442), Expect = 1.960e-49 Identity = 86/192 (44.79%), Postives = 121/192 (63.02%), Query Frame = 1
Query: 199 WIQDFCSKPGNEFFAEVPVSFIRERMNTIEIGRGVDIPYMEEALAVILDER-----CLNVGEASIVESSAALLYGLLHARFLVSPGGLKVLLDMFSKGAFGRCPRVYCQGQAVLPVGETDRPMQSSVKVFCPRCKEIYFPAGNLR-TCDGAFFGTTSFALLLLGWPELKKSPSTSVFVPRVFGFKMHQIGVG 756
WI FCS GNEFF EV +I + N G +PY E AL +ILD L + ++ES+A +LYGL+HAR++V+ GL +L+ F FGRCPR +C+GQA LPVG +D P QS+VK+FCP+C++I++P + + DGA++GTT LLL+ +P + S V+VPR+FGFK+H G
Sbjct: 43 WISWFCSLRGNEFFCEVDEEYIEDDFNLS--GLSSQVPYYEYALDMILDNEPPHDVMLTDQQHELLESAAEMLYGLIHARYIVTARGLACMLEKFKNFEFGRCPRFHCEGQACLPVGTSDVPGQSTVKIFCPKCEDIFYPRSEYQCSIDGAYYGTTFPHLLLMTYPMYRPPKSNDVYVPRIFGFKLHPSAYG 232
BLAST of mRNA_P-fluviatile_contig20.4404.1 vs. uniprot
Match: A0A6A2WR79_HIBSY (Casein kinase II subunit beta n=5 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WR79_HIBSY) HSP 1 Score: 174 bits (442), Expect = 2.130e-49 Identity = 87/187 (46.52%), Postives = 118/187 (63.10%), Query Frame = 1
Query: 199 WIQDFCSKPGNEFFAEVPVSFIRERMNTIEIGRGVDIPYMEEALAVILDERC-----LNVGEASIVESSAALLYGLLHARFLVSPGGLKVLLDMFSKGAFGRCPRVYCQGQAVLPVGETDRPMQSSVKVFCPRCKEIYFPAGNLR-TCDGAFFGTTSFALLLLGWPELKKSPSTSVFVPRVFGFKMH 741
WI FC+ GNEFF EV +I++ N G +PY E AL +ILD L + +VES+A +LYGL+HARF+++ G+ +LD + FGRCPRVYC GQ LPVG++D P S+VKV+CPRC++IY+P + DGA+FGTT L L+ + LK +T +VPRVFGFK+H
Sbjct: 101 WISWFCNLRGNEFFCEVDNDYIQDDFNLC--GLSSQVPYYEHALDLILDIESSHGDMLTEEQNELVESAAEMLYGLIHARFILTSKGMAAMLDKYKNYDFGRCPRVYCCGQPCLPVGQSDFPRSSTVKVYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYSHLKPQKATQSYVPRVFGFKLH 285
BLAST of mRNA_P-fluviatile_contig20.4404.1 vs. uniprot
Match: UPI001B3BE397 (casein kinase II subunit beta-2 isoform X1 n=2 Tax=Gossypium hirsutum TaxID=3635 RepID=UPI001B3BE397) HSP 1 Score: 171 bits (434), Expect = 3.370e-49 Identity = 84/187 (44.92%), Postives = 118/187 (63.10%), Query Frame = 1
Query: 199 WIQDFCSKPGNEFFAEVPVSFIRERMNTIEIGRGVDIPYMEEALAVILDERC-----LNVGEASIVESSAALLYGLLHARFLVSPGGLKVLLDMFSKGAFGRCPRVYCQGQAVLPVGETDRPMQSSVKVFCPRCKEIYFPAGNLR-TCDGAFFGTTSFALLLLGWPELKKSPSTSVFVPRVFGFKMH 741
WI FC+ GNEFF EV +I++ N G +PY + AL +ILD + +VES+A +LYGL+HARF+++ G+ +LD + FGRCPRVYC GQ LPVG++D P S+VK+FCPRC++IY+P + DGA+FGTT L L+ + LK ++ ++VPRVFGFK+H
Sbjct: 22 WISWFCNLRGNEFFCEVDDDYIQDDFNLC--GLSSQVPYYDYALDLILDIESSHGDMFTEEQNELVESAAEMLYGLIHARFILTSKGMAAMLDKYKNYDFGRCPRVYCCGQPCLPVGQSDFPRSSTVKIFCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYSHLKPLKASQIYVPRVFGFKLH 206 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig20.4404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig20.4404.1 >prot_P-fluviatile_contig20.4404.1 ID=prot_P-fluviatile_contig20.4404.1|Name=mRNA_P-fluviatile_contig20.4404.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=255bp MVASKARMHTGATLLVSFLVLLSCFPATCKQWGKKSLSSPSSIRGVDISPback to top mRNA from alignment at P-fluviatile_contig20:2238690..2241781+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig20.4404.1 ID=mRNA_P-fluviatile_contig20.4404.1|Name=mRNA_P-fluviatile_contig20.4404.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3092bp|location=Sequence derived from alignment at P-fluviatile_contig20:2238690..2241781+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig20:2238690..2241781+ >mRNA_P-fluviatile_contig20.4404.1 ID=mRNA_P-fluviatile_contig20.4404.1|Name=mRNA_P-fluviatile_contig20.4404.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1530bp|location=Sequence derived from alignment at P-fluviatile_contig20:2238690..2241781+ (Porterinema fluviatile SAG_2381)back to top |