mRNA_P-fluviatile_contig20.4359.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig20.4359.1
Unique NamemRNA_P-fluviatile_contig20.4359.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig20.4359.1 vs. uniprot
Match: D7G4N4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4N4_ECTSI)

HSP 1 Score: 487 bits (1254), Expect = 7.730e-162
Identity = 278/465 (59.78%), Postives = 317/465 (68.17%), Query Frame = 2
Query:  401 PRTCTSKVAEYAAVCGGGSGVERTRSVLEARKKKKKPKDKRHKKNDRGTSSNQLTQTSVSNQGGDDTPAYKYDDGADDGDDQEGPVLEGIFHDGAMYLVDGRGNVFSAERDERGGLVEVGTFDENRRQVVM--------NEQSTSGVPANTMESAATAKGEVETPSN---RHGSAPPGVIAAGSSKQKKRKKTAKGVED--GAKTDGSAGTGAVD---VVEYPYEVEECDHCETSERAYADIAPLLSALAAELGKTPEELVIYDPYYCQGSTVRRLASLGFPRVYNRKEDFYKVVKDGVVPEHDVVVTNPPFSGDHVPKILSFCARNGGKPWFLLMPNYVYLKNYYESSLGRSPGGGTTLPFYLTPPKRYMYYSPARSRLKVKSSERKTSPFNTFWYISLGDGHTTSKILQSYDVVSRKADKGAKCCIARTTQQIPFKMMDSNDPRRKKARDRQRSIDRIRKKQS 1747
            P  CTSKVAEY+A      G   T    E + KKKK +DK   ++D+                 D  P    ++ + D  D E PVLEGI HDGAMYLVD R  VFSA+RDE+GGLVEVGTFD+   +V+M                            G + +P +   R  +       AG+ K K             G+  D +A  GA     VVEYP+EVEECDHCETSERAY+DI+PLLSALAAELGK PE+LVIYDPYYCQGSTV RLASLGFPRV+NRKEDFY+VVK+G +P+HDVVVTNPPFSG+H+PKIL FCAR G KPWFLL+PNYVYLK+YYE SLGR  G G T PFYLTPPKRYMYYSP  SRLKVKSSERKTSPFNTFWYI LGD   TSKILQSYD  SRK D  A+CC+ARTTQQIP+KMMDSNDPRRKKARDRQRSIDRIRKK++
Sbjct:   94 PLICTSKVAEYSAGTSDDKGTAGTPVKRETKSKKKKRRDKGSLRHDQ-----------------DHVPPSADEETSPDN-DNESPVLEGIVHDGAMYLVDARRRVFSAQRDEQGGLVEVGTFDDKGGKVIMIXXXXXXXXXXXXXXXXXXXXXXXXXXAGLISSPPSALHRDPATKTDATEAGNGKAKXXXXXXXXXXXXAGSSEDVAASVGAEAESVVVEYPFEVEECDHCETSERAYSDISPLLSALAAELGKPPEDLVIYDPYYCQGSTVGRLASLGFPRVHNRKEDFYEVVKNGNIPQHDVVVTNPPFSGEHMPKILKFCARQGAKPWFLLLPNYVYLKDYYEPSLGRRSGQGATRPFYLTPPKRYMYYSPQGSRLKVKSSERKTSPFNTFWYIHLGDCAVTSKILQSYDAASRKLDINARCCVARTTQQIPYKMMDSNDPRRKKARDRQRSIDRIRKKKN 540          
BLAST of mRNA_P-fluviatile_contig20.4359.1 vs. uniprot
Match: A0A835YHP0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHP0_9STRA)

HSP 1 Score: 238 bits (606), Expect = 4.420e-68
Identity = 147/392 (37.50%), Postives = 198/392 (50.51%), Query Frame = 2
Query:  626 ADDGDDQEGPVLEGIFHDGAMYLVDG-RGNVFSAERDERGGLVEVGTFDENRRQVVMNEQSTSGVPANTMESAATAKGEVETPSNRHGSAPPGVIAAGSSKQKKRKKTAKGVEDGAKTDGSAGTGAVDVVEYPYEVEECDHCETSE--------------------RAYADIAPLLSALAAELGKTPEELVIYDPYYCQGSTVRRLASLGFPRVYNRKEDFYKVVKDGVVPEHDVVVTNPPFSGDHVPKILSFCARNGGKPWFLLMPNYVYLKNYYESSLGRSPGGGTTLPFYLTPPKRYMYYSPARSRLKVKSSERKTSPFNTFWYISLGDGHTTSKILQSYDVVSRKADKGAKCCIARTTQQIPFKMMDSNDPRRKKARDRQRSIDRIRK 1738
            A D DD+    LEG+ H  ++ L+    G VFS+ERD  G LV VG +                          +  G ++     H +  P V                                    +YP++V++ +HCETS                      AYA IAPLL ALAA  GK   +L IYDPYYCQGS V    +LGFPRV+N KEDFY+V+++G VP+HD +VTNPP+SGDHV ++L  C  +  +PW LL+PNYVY K +Y      S         ++TPPKRY YY         +SSERKTSPF TFWYI LG  HT +  L ++     +  +  +CC+AR    +P++ MDS+DP RK+ RDR+RS  R++K
Sbjct:   29 ASDNDDEPSTDLEGVLHGPSLLLLHRPSGAVFSSERDGGGRLVRVGDW--------------------------SVTGGIQLTERAHAAVDPDV------------------------------------DYPFDVDQDNHCETSXXXXXXXXXXXXXXXXXXXXAEAYAHIAPLLEALAAAKGKPKAKLRIYDPYYCQGSVVANFVALGFPRVHNVKEDFYRVIEEGRVPKHDALVTNPPYSGDHVERLLRHCVSSK-RPWLLLLPNYVYTKEFYRQLTAASKTA-----VFITPPKRYHYYR--------QSSERKTSPFITFWYIDLGPKHTQAA-LAAWQAAQARLPESERCCLARAASALPYRCMDSSDPLRKRERDRRRSKQRLQK 343          
BLAST of mRNA_P-fluviatile_contig20.4359.1 vs. uniprot
Match: A0A7S3XRY6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRY6_HETAK)

HSP 1 Score: 220 bits (561), Expect = 1.540e-62
Identity = 112/235 (47.66%), Postives = 147/235 (62.55%), Query Frame = 2
Query: 1007 VVEYPYEVEECDHCETSERAYADIAPLLSALAAELGKTPEELVIYDPYYCQGSTVRRLASLGFPRVYNRKEDFYKVVKDGVVPEHDVVVTNPPFSGDHVPKILSFCARNGGKPWFLLMPNYVYLKNYYESSLGRSPGGGTTLPFYLTPPKRYMYYSPARSRLKVKSSERKTSPFNTFWYISLGDGH-TTSKILQSYDVVSRKADKGAKCCIARTTQQIPFKMMDSNDPRRKKARD 1708
            V EYPY V+E DHCET E AY DIA +L  +A +L K  + L IYDPY+CQG  ++    LGF  VYN+ EDFY+ V     P+ DV+VTNPP+SGDH+ +IL FC  +  KPWFLL+PN+VY+K YY +            P Y+TP KRY YYSP  SR  VKSSERKTSPF +FWY  L   H   + +  +    +R   +G    +AR  +Q+P + +D NDP +++ RD
Sbjct:   49 VFEYPYAVDEDDHCETCEEAYEDIATILEHIAEDLNKPKKCLQIYDPYFCQGLVIKSFEKLGFSSVYNKLEDFYEKVDSKSTPDFDVLVTNPPYSGDHIERILKFCIASK-KPWFLLVPNWVYMKEYYMNLTKNIK------PIYITPAKRYSYYSPRVSRTNVKSSERKTSPFPSFWYADLTARHGRAAAVFLANQTPTRGGGEGGGAHLARGPRQLPERYLDQNDPAKRRLRD 276          
BLAST of mRNA_P-fluviatile_contig20.4359.1 vs. uniprot
Match: A0A7S4D5V1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5V1_HETAK)

HSP 1 Score: 220 bits (561), Expect = 1.370e-61
Identity = 112/235 (47.66%), Postives = 147/235 (62.55%), Query Frame = 2
Query: 1007 VVEYPYEVEECDHCETSERAYADIAPLLSALAAELGKTPEELVIYDPYYCQGSTVRRLASLGFPRVYNRKEDFYKVVKDGVVPEHDVVVTNPPFSGDHVPKILSFCARNGGKPWFLLMPNYVYLKNYYESSLGRSPGGGTTLPFYLTPPKRYMYYSPARSRLKVKSSERKTSPFNTFWYISLGDGH-TTSKILQSYDVVSRKADKGAKCCIARTTQQIPFKMMDSNDPRRKKARD 1708
            V EYPY V+E DHCET E AY DIA +L  +A +L K  + L IYDPY+CQG  ++    LGF  VYN+ EDFY+ V     P+ DV+VTNPP+SGDH+ +IL FC  +  KPWFLL+PN+VY+K YY +            P Y+TP KRY YYSP  SR  VKSSERKTSPF +FWY  L   H   + +  +    +R   +G    +AR  +Q+P + +D NDP +++ RD
Sbjct:  124 VFEYPYAVDEDDHCETCEEAYEDIATILEHIAEDLNKPKKCLQIYDPYFCQGLVIKSFEKLGFSSVYNKLEDFYEKVDSKSTPDFDVLVTNPPYSGDHIERILKFCIASK-KPWFLLVPNWVYMKEYYMNLTKNIK------PIYITPAKRYSYYSPRVSRTNVKSSERKTSPFPSFWYADLTARHGRAAAVFLANQTPTRGGGEGGGAHLARGPRQLPERYLDQNDPAKRRLRD 351          
BLAST of mRNA_P-fluviatile_contig20.4359.1 vs. uniprot
Match: R1ENP6_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ENP6_EMIHU)

HSP 1 Score: 195 bits (496), Expect = 2.530e-52
Identity = 127/360 (35.28%), Postives = 175/360 (48.61%), Query Frame = 2
Query:  659 LEGIFHDGAMYLVDGRGNVFSAERDERGGLVEVGTFDENRRQVVMNEQSTSGVPANTMESAATAKGEVETPSNRHGSAPPGVIAAGSSKQKKRKKTAKGVEDGAKTDGSAGTGAVDVVEYPYEVEECDHCETSERAYADIAPLLSALAAELGKTPEELVIYDPYYCQGSTVRRLASLGFPRVYNRKEDFYKVVKDGVVPEHDVVVTNPPFSGDHVPKILSFCARNGGKPWFLLMPNYVYLKNYYESSLGRSPGGGTTLPFYLTPPKRYMYYSPARSRLKVKSSERK--------------TSPFNTFWYISLGDGHTTSKILQSYDVVSRKADKGAKCCIARTTQQIPFKMMDSNDPRRK 1696
            L+G+   G + L    G V+++ERD+RG LV VG ++      +    S+S       E+A  A GE   PS  H    P   +A                                        E DHCET+  AYA I  LL  +A + G  PEEL I+DPYYC G+  R LA+LGFP V+N  EDFY  +  G +PEHDV++TNPP++  H  ++L+ CA +G  PW  LMPN+VY K+YY ++LGRS G   T PFY+ P KRY Y++P   R  + S   K              TSPF +FWY   G G    K          +      C +  +T+++P  ++  +DPRRK
Sbjct:   34 LQGVVLGGELLLRAADGTVYASERDDRGALVAVGRWEAGAVVPLPKAVSSS-------EAAGGATGEARQPSVPHPVPQPLAFSAA---------------------------------------EDDHCETAPEAYAHIVSLLRLVARKRGVPPEELRIWDPYYCNGAVARHLAALGFPHVHNANEDFYARLDSGDLPEHDVLLTNPPYTHPHPERLLAHCAASG-TPWLALMPNWVYTKDYYWAALGRSHGTADTQPFYIAPRKRYNYWTPRGRRSDLTSGGAKAKTHGHTNAALGIRTSPFVSFWYCG-GFGPALRK----------RVTPPEGCVLCWSTEELPPGVLSESDPRRK 335          
BLAST of mRNA_P-fluviatile_contig20.4359.1 vs. uniprot
Match: L1JYH6_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JYH6_GUITC)

HSP 1 Score: 186 bits (472), Expect = 1.530e-51
Identity = 90/175 (51.43%), Postives = 115/175 (65.71%), Query Frame = 2
Query: 1022 YEVEECDHCETSERAYADIAPLLSALAAELGKTPEELVIYDPYYCQGSTVRRLASLGFPRVYNRKEDFYKVVKDGVVPEHDVVVTNPPFSGDHVPKILSFCARNGGKPWFLLMPNYVYLKNYYESSLGRSPGGGTTLPFYLTPPKRYMYYSPARSRLKVKSSERKTSPFNTFWYI 1546
            + VE  DHCET   AY DI P+L A+A+ +GK  +EL+IYDPYYC G   + L   GF  VYN+ EDFY+ VK G  P  DV+VTNPP+S DH+ ++ SFC+ +  KPW +L+PNYVY K+YYE  L          PFY+ PP RY Y SPA +R    S E+KTSPF +FW+I
Sbjct:    1 FSVEHQDHCETPGEAYDDIVPVLLAIASNIGKRADELMIYDPYYCNGLVAQNLRDRGFQHVYNKNEDFYEAVKQGTTPPFDVLVTNPPYSNDHIERLFSFCS-SCEKPWMVLVPNYVYTKDYYEKMLKSG-----VRPFYVIPPNRYEYISPAGAR---GSREKKTSPFVSFWFI 166          
BLAST of mRNA_P-fluviatile_contig20.4359.1 vs. uniprot
Match: A0A7S4P7Q6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4P7Q6_GUITH)

HSP 1 Score: 197 bits (501), Expect = 2.130e-51
Identity = 109/241 (45.23%), Postives = 147/241 (61.00%), Query Frame = 2
Query: 1007 VVEYPYEVEECDHCETSERAYADIAPLLSALAAELGKTPEELVIYDPYYCQGSTVRRLASLGFPRVYNRKEDFYKVVKDGVVPEHDVVVTNPPFSGDHVPKILSFCARNGGKPWFLLMPNYVYLKNYYESSL-GRSPGGGTTLPFYLTPPKRYMYYSP-----ARSRLKVKSSERKTSPFNTFWYISLGDGHTTSKILQSYDV----VSRKADKGAKCCIARTTQQIPFKMMDSNDPRRKK 1699
            +V + +E  + DH ET   AY  I PLL  +A    K P EL IYDP++C GS  R LASLGF  VYN+ EDFY++VK   +PEHD+VVTNPP+S DH+P+ L + + N  KPW LL+PNYVY K+Y+ SSL GR       LP +LTPP RY+Y SP     A+ +++ KS E KT+P+ +FWY+       T  I+Q   V    ++ K      C + +  +Q+P  M DS DP RK+
Sbjct:  274 LVRHSFETTDADHAETPREAYEHILPLLHKMAEAASKKPSELRIYDPFFCTGSMKRHLASLGFTNVYNKNEDFYEMVKSKRIPEHDMVVTNPPYSLDHIPRFLRWLSVND-KPWLLLVPNYVYTKDYFSSSLRGR-------LPMFLTPPGRYVYESPKHVANAQGQIR-KSGEHKTAPYVSFWYVE------TRPIIQPNQVHTWWMAEKMFDKTNCRLCKNVEQLPANMRDSFDPLRKR 499          
BLAST of mRNA_P-fluviatile_contig20.4359.1 vs. uniprot
Match: A0A7S0QTD9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QTD9_9CRYP)

HSP 1 Score: 186 bits (471), Expect = 3.780e-50
Identity = 99/235 (42.13%), Postives = 145/235 (61.70%), Query Frame = 2
Query: 1016 YPYEVEECDHCETSERAYADIAPLLSALAAELGKTPEELVIYDPYYCQGSTVRRLASLGFPRVYNRKEDFYKVVKDGVVPEHDVVVTNPPFSGDHVPKILSFCARNGGKPWFLLMPNYVYLKNYYESSLGRSPGGGTTLPFYLTPP-KRYMYYSPARSRLKVKSSERKTSPFNTFWYISLGDGHTTSKILQSYDVVSRKADKGAKCCIARTTQQIPFKMMDSNDPRRKKARDRQR 1717
            + +E ++ DHCETSE AY DI+  L  LA+ LGKTP++L IYDPYYC G+ V+ LA+ GF  VYN+ EDFY+ + +G VP +DV VTNPP+SGDH+ ++L FC  +  KP+F L+PNYVY K YY+      P      PFYL P  +RY +++P   R K    E+KTSPF +FWY   G+   T+ +++ +   +          + +  + +P ++  + D  RK+ R +QR
Sbjct:   21 HTFETDKDDHCETSEEAYDDISVFLCRLASILGKTPKDLAIYDPYYCNGAVVKHLAARGFGNVYNKNEDFYRTIAEGRVPHYDVCVTNPPYSGDHIERMLKFCVESS-KPFFCLVPNYVYSKPYYD------PLTEKCRPFYLIPENRRYEFWTPGGFR-KQSLREKKTSPFISFWYCHAGE--QTAALIKWWRKRTCFDSVDKSTVLVQNLRLLPHRVKATFDKNRKRLRKKQR 245          
BLAST of mRNA_P-fluviatile_contig20.4359.1 vs. uniprot
Match: A0A061S5M7_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S5M7_9CHLO)

HSP 1 Score: 187 bits (474), Expect = 1.220e-49
Identity = 102/227 (44.93%), Postives = 132/227 (58.15%), Query Frame = 2
Query: 1013 EYPYEVEECDHCETSERAYADIAPLLSALAAELGKTPEELVIYDPYYCQGSTVRRLASLGFPRVYNRKEDFYKVVKDGVVPEHDVVVTNPPFSGDHVPKILSFCARN--GGKPWFLLMPNYVYLKNYYE---SSLGRSPGGGTTLPFYLTPPKRYMYYSPARSRL------KVKSSERKTSPFNTFWYISLGDGHTTSKILQSYDVVSRKADKGAKCCIARTTQQIP 1660
            E  +  ++ DHCET   AY DI PLL  L   LGK   EL +YDPYYC+GS  + LASLGFP VYNR EDFY+  + G +PEHDV+VTNPP+SGDH+ +ILSFCA N  G +P+FLLMPN+V  K+YY    SS   +P      P YL P   Y ++SP R +         +       PF T WYI  G    +++ L  +    +K    AKC +A T + +P
Sbjct:   87 ERAFSTDDTDHCETPFDAYRDIEPLLFRLVQVLGKAKSELRLYDPYYCEGSMRKHLASLGFPSVYNRNEDFYRAARVGAIPEHDVLVTNPPYSGDHMQRILSFCAANPRGERPFFLLMPNFVMRKSYYRDVFSSADSAP------PMYLVPNTPYKFWSPGRQKFCSRFVANTRGGIGPQVPFQTIWYIG-GLSRASAEALAKW--WHKKYGDSAKCVLASTEEDLP 304          
BLAST of mRNA_P-fluviatile_contig20.4359.1 vs. uniprot
Match: A0A7S3GZA9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZA9_9STRA)

HSP 1 Score: 185 bits (470), Expect = 4.680e-49
Identity = 114/305 (37.38%), Postives = 161/305 (52.79%), Query Frame = 2
Query: 1013 EYPYEVEECDHCETSERAYADIAPLLSALAAELGKTPEELVIYDPYYCQGSTVRRLASLGFPRVYNRKEDFYKVVKDGVVPEHDVVVTNPPFSGDHVPKILSFCARNGG-KPWFLLMPNYVYLKNYYESSLGRSPGGGTTLPFYLTPP--KRYMYYSPARSRLKVKSSERKTSPFNTFWYISLGDGH------------------------TTSKILQSYD----VVSRKADKGAKCC--------------------IARTTQQIPFKMMDSNDPRRKKARDRQ-RSIDRIRKKQS*GSSAGNS 1771
            +YPY V   DHCE+   AY DI   L  +A  LGKT E L I+DPY+C+GS   RLA++GFP V N K DFY+ +    VP++DV++TNPP+SG H+ ++L +C  N G +PWFLL+PNYVY K+YY     R+ GG    PFY+TP   +RY+Y +P + R + KS +  TSPF TFWY  + +                          T+S+   + +    V S  AD  +                       ++ +T  IP  +   NDPR+KK R+ Q RS ++ R+K     +AG S
Sbjct:   35 DYPYPVVPDDHCESPMEAYQDIEHFLVVIAKSLGKTKESLRIFDPYFCEGSMKERLAAIGFPNVTNEKRDFYESITTNTVPDYDVLITNPPYSGTHMERLLQYCNENNGTRPWFLLLPNYVYTKDYYAPIFERNKGGSK--PFYVTPANGRRYLYTTP-KGRRQEKSGKF-TSPFPTFWYCQIHENKDTLLSQAAAHRANMNRNTPATIKSTSSEKAHTEESAPVVASTSADTASNAVGEVLSSSSAPSAPKKPHAIVVSMSTSTIPIDIAPDNDPRKKKLRNNQKRSKNKKRQKDGKPIAAGGS 335          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig20.4359.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4N4_ECTSI7.730e-16259.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHP0_9STRA4.420e-6837.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XRY6_HETAK1.540e-6247.66Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4D5V1_HETAK1.370e-6147.66Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
R1ENP6_EMIHU2.530e-5235.28Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
L1JYH6_GUITC1.530e-5151.43Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A7S4P7Q6_GUITH2.130e-5145.23Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S0QTD9_9CRYP3.780e-5042.13Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A061S5M7_9CHLO1.220e-4944.93Uncharacterized protein n=1 Tax=Tetraselmis sp. GS... [more]
A0A7S3GZA9_9STRA4.680e-4937.38Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig20contigP-fluviatile_contig20:1644080..1648137 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score502.3
Seed ortholog evalue3.1e-139
Seed eggNOG ortholog2880.D7G4N4
EggNOG OGs2BXY2@1,2S2G6@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-17_001820.1
Exons7
Model size2202
Cds size1743
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815909.9111822-UTR-P-fluviatile_contig20:1644079..16440861622815909.9111822-UTR-P-fluviatile_contig20:1644079..1644086Porterinema fluviatile SAG_2381UTRP-fluviatile_contig20 1644080..1644086 +
1693563700.9280918-UTR-P-fluviatile_contig20:1644079..16440861693563700.9280918-UTR-P-fluviatile_contig20:1644079..1644086Porterinema fluviatile SAG_2381UTRP-fluviatile_contig20 1644080..1644086 +
1622815910.0134213-UTR-P-fluviatile_contig20:1647685..16481371622815910.0134213-UTR-P-fluviatile_contig20:1647685..1648137Porterinema fluviatile SAG_2381UTRP-fluviatile_contig20 1647686..1648137 +
1693563701.1972797-UTR-P-fluviatile_contig20:1647685..16481371693563701.1972797-UTR-P-fluviatile_contig20:1647685..1648137Porterinema fluviatile SAG_2381UTRP-fluviatile_contig20 1647686..1648137 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815909.9247077-CDS-P-fluviatile_contig20:1644086..16451121622815909.9247077-CDS-P-fluviatile_contig20:1644086..1645112Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1644087..1645112 +
1693563701.1184456-CDS-P-fluviatile_contig20:1644086..16451121693563701.1184456-CDS-P-fluviatile_contig20:1644086..1645112Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1644087..1645112 +
1622815909.9369981-CDS-P-fluviatile_contig20:1645442..16456401622815909.9369981-CDS-P-fluviatile_contig20:1645442..1645640Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1645443..1645640 +
1693563701.131522-CDS-P-fluviatile_contig20:1645442..16456401693563701.131522-CDS-P-fluviatile_contig20:1645442..1645640Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1645443..1645640 +
1622815909.950153-CDS-P-fluviatile_contig20:1645925..16460751622815909.950153-CDS-P-fluviatile_contig20:1645925..1646075Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1645926..1646075 +
1693563701.1407568-CDS-P-fluviatile_contig20:1645925..16460751693563701.1407568-CDS-P-fluviatile_contig20:1645925..1646075Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1645926..1646075 +
1622815909.961858-CDS-P-fluviatile_contig20:1646519..16465961622815909.961858-CDS-P-fluviatile_contig20:1646519..1646596Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1646520..1646596 +
1693563701.1496224-CDS-P-fluviatile_contig20:1646519..16465961693563701.1496224-CDS-P-fluviatile_contig20:1646519..1646596Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1646520..1646596 +
1622815909.9738553-CDS-P-fluviatile_contig20:1646885..16470031622815909.9738553-CDS-P-fluviatile_contig20:1646885..1647003Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1646886..1647003 +
1693563701.1585045-CDS-P-fluviatile_contig20:1646885..16470031693563701.1585045-CDS-P-fluviatile_contig20:1646885..1647003Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1646886..1647003 +
1622815909.9889355-CDS-P-fluviatile_contig20:1647304..16473821622815909.9889355-CDS-P-fluviatile_contig20:1647304..1647382Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1647305..1647382 +
1693563701.1697464-CDS-P-fluviatile_contig20:1647304..16473821693563701.1697464-CDS-P-fluviatile_contig20:1647304..1647382Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1647305..1647382 +
1622815910.0011518-CDS-P-fluviatile_contig20:1647589..16476851622815910.0011518-CDS-P-fluviatile_contig20:1647589..1647685Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1647590..1647685 +
1693563701.1842196-CDS-P-fluviatile_contig20:1647589..16476851693563701.1842196-CDS-P-fluviatile_contig20:1647589..1647685Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1647590..1647685 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig20.4359.1prot_P-fluviatile_contig20.4359.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig20 1644087..1647685 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig20.4359.1

>prot_P-fluviatile_contig20.4359.1 ID=prot_P-fluviatile_contig20.4359.1|Name=mRNA_P-fluviatile_contig20.4359.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=581bp
MTGRAASTKGKRRERSDGNGAEAAAKGATEEPEATTAAATVVADNGAESS
GKTKKKKRRKRVQTRGDNGESEIEPDLGLAKSVGCQERKTADGAKRPKKS
ADAPAPSAADAAIVAGGTSAVGAAGLSPQPFPRTCTSKVAEYAAVCGGGS
GVERTRSVLEARKKKKKPKDKRHKKNDRGTSSNQLTQTSVSNQGGDDTPA
YKYDDGADDGDDQEGPVLEGIFHDGAMYLVDGRGNVFSAERDERGGLVEV
GTFDENRRQVVMNEQSTSGVPANTMESAATAKGEVETPSNRHGSAPPGVI
AAGSSKQKKRKKTAKGVEDGAKTDGSAGTGAVDVVEYPYEVEECDHCETS
ERAYADIAPLLSALAAELGKTPEELVIYDPYYCQGSTVRRLASLGFPRVY
NRKEDFYKVVKDGVVPEHDVVVTNPPFSGDHVPKILSFCARNGGKPWFLL
MPNYVYLKNYYESSLGRSPGGGTTLPFYLTPPKRYMYYSPARSRLKVKSS
ERKTSPFNTFWYISLGDGHTTSKILQSYDVVSRKADKGAKCCIARTTQQI
PFKMMDSNDPRRKKARDRQRSIDRIRKKQS*
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mRNA from alignment at P-fluviatile_contig20:1644080..1648137+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig20.4359.1 ID=mRNA_P-fluviatile_contig20.4359.1|Name=mRNA_P-fluviatile_contig20.4359.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4058bp|location=Sequence derived from alignment at P-fluviatile_contig20:1644080..1648137+ (Porterinema fluviatile SAG_2381)
ACGGAAAATGACGGGTAGAGCGGCTTCCACGAAGGGAAAGCGACGGGAAA GATCAGACGGCAACGGGGCGGAAGCAGCGGCAAAAGGAGCGACCGAGGAG CCGGAGGCAACAACTGCTGCTGCTACTGTGGTAGCGGACAACGGCGCTGA ATCGTCTGGAAAGACGAAGAAAAAGAAGAGGCGCAAAAGGGTCCAGACTC GTGGAGACAACGGGGAAAGCGAAATAGAGCCTGATCTTGGCCTTGCGAAG AGCGTTGGTTGCCAGGAACGGAAAACGGCTGATGGCGCCAAGAGACCCAA GAAGAGTGCGGATGCTCCTGCCCCCTCAGCCGCTGATGCTGCAATTGTTG CCGGAGGCACGTCCGCTGTTGGTGCTGCTGGGTTGTCACCACAACCTTTT CCCCGTACTTGCACATCAAAAGTCGCAGAGTACGCCGCGGTTTGTGGCGG CGGCAGTGGGGTGGAACGGACCCGATCAGTATTGGAGGCCCGCAAGAAGA AGAAAAAGCCCAAGGACAAGAGGCATAAGAAGAATGACCGAGGAACCTCT TCGAACCAATTGACGCAAACCTCCGTTTCGAATCAAGGGGGGGACGACAC CCCTGCTTACAAGTACGATGATGGCGCAGACGATGGCGACGACCAGGAAG GCCCAGTTCTAGAGGGCATCTTCCACGACGGTGCCATGTACCTTGTCGAC GGGCGAGGAAACGTGTTCTCCGCCGAACGAGATGAGCGGGGAGGTCTCGT GGAGGTCGGAACCTTCGACGAAAACCGCCGACAGGTGGTGATGAATGAGC AATCAACGTCGGGGGTCCCTGCCAACACAATGGAGTCGGCGGCAACGGCG AAGGGAGAAGTAGAAACGCCGTCAAATCGCCACGGTTCAGCCCCACCCGG CGTGATTGCCGCAGGCAGCAGTAAGCAAAAGAAGAGGAAGAAAACGGCAA AGGGTGTTGAAGATGGTGCTAAGACCGACGGTTCTGCCGGGACAGGGGCG GTCGACGTCGTGGAGTATCCATACGAGGTTGAGGTGCGTCATGTCGCCTG CTGTTTGTCCACTACTTCAAACGACAAGAGGCGTTCGCTTGAAATTCGTT TCGTGAACATTGATTTGACGGGAGCTCCGAAGTATAGAAGGCGTGATGTT GCTAGCTTCGACGTTCTCCCACTGCACCGGTATATTTAGAGCACATGCCA ACGCTCTCGCAGCTGTCTGATATTTTGGCCGATCGAAGGGTGCAGGAGAT ACGCTATAGCGCGAACCAATCAGCTCGCTATCAGGTCCCTCCCCCTTTGC CCGCTAGGCCAGTCAAACCAATGCGCACAAAATTGTCTCGGCGGCTGTTG CAATAACTCACAGGAATGCGATCATTGCGAAACGAGCGAGCGAGCCTACG CCGATATTGCCCCGCTCCTCTCGGCGCTGGCCGCGGAGTTGGGCAAAACA CCGGAGGAGCTCGTGATCTACGACCCTTACTATTGTCAAGGCTCCACCGT ACGAAGACTAGCATCGCTAGGCTTTCCTAGGGTGTACAACCGCAAGGAAG ACTTCTATAAGGTAGGCAGCCGGAGGTCAACGAAGATGGCAATTCTACTG CCTTTTCCGGGGCAGGTGATTTATATGCGCTTCACGCGGTGGGAGGCATG CTTCTGCTGGTGAAAGGCCTGCCACGGCCTTCACTTGGAATGTGCTTGAA TGGAACGTGGCACGGGCTTATTTGCGATAGACGGCGCATCGACTCCCGTA CCCAGCGCTCCAAAGTTGATTTACAATAATGTCTTCCAGCCTTGCATGTG TTTGTCGCGCATGTTTTCACGTGCCGTATTTTTGGGTTCAAGGAAGGTAG TGAAGGACGGAGTGGTCCCGGAGCACGACGTGGTCGTGACGAATCCGCCT TTCAGCGGCGACCATGTGCCCAAGATTCTTAGCTTCTGCGCTCGCAATGG GGGGAAGCCCTGGTTTCTCTTGATGCCCAACTACGTCTACCTCAAGGTAC AGACGAACATGCTGCGTGGACGATGGTTCAGGGGTGAAGTTCGGAGTGTC CAGACGGGATCGCCCCTCCGTTTTCCTCGTCTTTCGAACCACCCGCTGCC GTATGCTCTCATCATTAAATTCCTCCGTCCCGGCATTCGGTTCTTTTAGC CTAGGAGTAAGTACCTGTTCCACGGTGCATCATCCGTATTGTGCCTCTCT GGCGCTCTTCTTTTTTGTAACGAGGGCGCTTTTTCCTTCATCTGGGCGTT GTTCGCATATTTTTTTTCAAGGATGATGGTAATCGATCTTGTGTGTGTTT CCGGTTCGCGTGCATCAGGATTACTACGAACCGTTCCTGGTGTTCCATCT TATGTGTGTATGTGATTCGCGTGCATCAGGATTACTACGAACCGTTCCTG GTGTTCCATCTTGTGTGTGTATGTGATTCGCGTGCATCAGAACTACTACG AGTCGTCCTTGGGTCGCAGCCCTGGCGGAGGCACCACGCTGCCCTTCTAC CTCACTCCACCCAAGAGGTGAGTAGGGACCCGCCTTTCGTTCGATTCGAG TGTTTGCCGAGTGCTCAATGCTTACGTTCAAAATAAAGCATTTTTCCTGA CTACGTATGGGCGATACCTCTGCTCGTCCGTAGTAGCTACGATCGGACGG GTCTGGCACCGCGCTCTGGTTATCTGTACAGGCCCTGCTCTGAAAGCATT GAGTTTGTGATGGCAAAAATTGGCTTTCTTCCGACGACCTTGTTGTACCG CAAGCTGAGCTGAGATCGATACTAAACAATGTCTGGCCGCCGACGATAAA CCCCAGGTACATGTACTACAGCCCTGCGAGATCACGGTTGAAGGTCAAAA GTTCGGAGCGGAAAACGTCTCCTTTCAATACCTTCTGGTACATCAGCCTG GGCGACGGACACACCACGTCCAAGGTAGTTTTTTTGCGCCCAAGTCTACG AGACCTTGAAAGAGACGTCTCCGTCTCGGGGACAAACGGGAGCAGTCTCT CTACAATCTGGGCCTTTGAGGATTCTGTTGCCAGGACGAGGGTGCGAGGA TAGAGACTCATGGAAATGCTGGATCTTCAATGCGAAAAGCAGGATCGACG CTTTGCCAATTTGTTGTGTCACCCTTCTCTTGGACCGTGAAATACTGAAG GAAGTTTACGCATACGCCAAGCCACGCTCTTTGGCCGGATCGGTGGTGCA TACGCGATCGTTCTTTGAAGCGCAGATCCTCCAGTCGTACGACGTGGTGT CGAGGAAGGCGGACAAAGGCGCGAAGTGCTGCATTGCAAGGACAACCCAG CAGGTGGGGCTCTTCTTTTTTTCAACGTTTACGACAGTGACATTATGCTT TGTGTTAGAGAGTACCGTTTCCCTGGTGCACCCGGCCTCCATTCGCCTAA AATTATTTGTGGGGGACACTTGTGCCAGAATTGTGCCTTTTGAGGTGCCC CCCTTTCCACTGACGCCGTCTCTCATTGACCACCGATGCATGCCTCTCTT CGTTTGCCAGATCCCGTTCAAGATGATGGACTCGAACGACCCCCGCCGGA AGAAGGCGAGGGATCGTCAGCGTAGCATAGACAGGATCCGCAAAAAACAG AGCTAGGGGTCGTCAGCTGGAAATAGTTTGATTCGGTGGTCGAAGGCACG AGCTTTTGACATGAACTTATGCCAACCCGCGGGGATCGTGCCCAAAAGCA CCGAGAAACATAGGTCATCTGCAGAGTCCATTTGCCTTCGAGAGTTGGTC GTCCACTCCGTGATAGATCGACGGTGGCGCACGCCCGCCACGATCGTGCA AGCGAACTCACACACGCGCTACCATGCGAAAAGGTAGAGTTCGATGGCCT CCTCCGCTAGAATTGGAGACAGGCTGAGGGCGATGATGTTTTGGCCGGTC AGATGTCTTGAAGCACACATCGTTGAGTGCTGCCTGTCGAAGGGCCTCGT ACAACACGTCATCTACGACATTTTGCTCACCGTTTCATTATGCGCAAGAT TGTCATGTTGCACCGTGATGTATTCTCAGTTGACCACTTGCTCAACATTT GAATCCAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig20:1644080..1648137+

>mRNA_P-fluviatile_contig20.4359.1 ID=mRNA_P-fluviatile_contig20.4359.1|Name=mRNA_P-fluviatile_contig20.4359.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3486bp|location=Sequence derived from alignment at P-fluviatile_contig20:1644080..1648137+ (Porterinema fluviatile SAG_2381)
ATGACGGGTAGAGCGGCTTCCACGAAGGGAAAGCGACGGGAAAGATCAGA
CGGCAACGGGGCGGAAGCAGCGGCAAAAGGAGCGACCGAGGAGCCGGAGG
CAACAACTGCTGCTGCTACTGTGGTAGCGGACAACGGCGCTGAATCGTCT
GGAAAGACGAAGAAAAAGAAGAGGCGCAAAAGGGTCCAGACTCGTGGAGA
CAACGGGGAAAGCGAAATAGAGCCTGATCTTGGCCTTGCGAAGAGCGTTG
GTTGCCAGGAACGGAAAACGGCTGATGGCGCCAAGAGACCCAAGAAGAGT
GCGGATGCTCCTGCCCCCTCAGCCGCTGATGCTGCAATTGTTGCCGGAGG
CACGTCCGCTGTTGGTGCTGCTGGGTTGTCACCACAACCTTTTCCCCGTA
CTTGCACATCAAAAGTCGCAGAGTACGCCGCGGTTTGTGGCGGCGGCAGT
GGGGTGGAACGGACCCGATCAGTATTGGAGGCCCGCAAGAAGAAGAAAAA
GCCCAAGGACAAGAGGCATAAGAAGAATGACCGAGGAACCTCTTCGAACC
AATTGACGCAAACCTCCGTTTCGAATCAAGGGGGGGACGACACCCCTGCT
TACAAGTACGATGATGGCGCAGACGATGGCGACGACCAGGAAGGCCCAGT
TCTAGAGGGCATCTTCCACGACGGTGCCATGTACCTTGTCGACGGGCGAG
GAAACGTGTTCTCCGCCGAACGAGATGAGCGGGGAGGTCTCGTGGAGGTC
GGAACCTTCGACGAAAACCGCCGACAGGTGGTGATGAATGAGCAATCAAC
GTCGGGGGTCCCTGCCAACACAATGGAGTCGGCGGCAACGGCGAAGGGAG
AAGTAGAAACGCCGTCAAATCGCCACGGTTCAGCCCCACCCGGCGTGATT
GCCGCAGGCAGCAGTAAGCAAAAGAAGAGGAAGAAAACGGCAAAGGGTGT
TGAAGATGGTGCTAAGACCGACGGTTCTGCCGGGACAGGGGCGGTCGACG
TCGTGGAGTATCCATACGAGGTTGAGATGACGGGTAGAGCGGCTTCCACG
AAGGGAAAGCGACGGGAAAGATCAGACGGCAACGGGGCGGAAGCAGCGGC
AAAAGGAGCGACCGAGGAGCCGGAGGCAACAACTGCTGCTGCTACTGTGG
TAGCGGACAACGGCGCTGAATCGTCTGGAAAGACGAAGAAAAAGAAGAGG
CGCAAAAGGGTCCAGACTCGTGGAGACAACGGGGAAAGCGAAATAGAGCC
TGATCTTGGCCTTGCGAAGAGCGTTGGTTGCCAGGAACGGAAAACGGCTG
ATGGCGCCAAGAGACCCAAGAAGAGTGCGGATGCTCCTGCCCCCTCAGCC
GCTGATGCTGCAATTGTTGCCGGAGGCACGTCCGCTGTTGGTGCTGCTGG
GTTGTCACCACAACCTTTTCCCCGTACTTGCACATCAAAAGTCGCAGAGT
ACGCCGCGGTTTGTGGCGGCGGCAGTGGGGTGGAACGGACCCGATCAGTA
TTGGAGGCCCGCAAGAAGAAGAAAAAGCCCAAGGACAAGAGGCATAAGAA
GAATGACCGAGGAACCTCTTCGAACCAATTGACGCAAACCTCCGTTTCGA
ATCAAGGGGGGGACGACACCCCTGCTTACAAGTACGATGATGGCGCAGAC
GATGGCGACGACCAGGAAGGCCCAGTTCTAGAGGGCATCTTCCACGACGG
TGCCATGTACCTTGTCGACGGGCGAGGAAACGTGTTCTCCGCCGAACGAG
ATGAGCGGGGAGGTCTCGTGGAGGTCGGAACCTTCGACGAAAACCGCCGA
CAGGTGGTGATGAATGAGCAATCAACGTCGGGGGTCCCTGCCAACACAAT
GGAGTCGGCGGCAACGGCGAAGGGAGAAGTAGAAACGCCGTCAAATCGCC
ACGGTTCAGCCCCACCCGGCGTGATTGCCGCAGGCAGCAGTAAGCAAAAG
AAGAGGAAGAAAACGGCAAAGGGTGTTGAAGATGGTGCTAAGACCGACGG
TTCTGCCGGGACAGGGGCGGTCGACGTCGTGGAGTATCCATACGAGGTTG
AGGAATGCGATCATTGCGAAACGAGCGAGCGAGCCTACGCCGATATTGCC
CCGCTCCTCTCGGCGCTGGCCGCGGAGTTGGGCAAAACACCGGAGGAGCT
CGTGATCTACGACCCTTACTATTGTCAAGGCTCCACCGTACGAAGACTAG
CATCGCTAGGCTTTCCTAGGGTGTACAACCGCAAGGAAGACTTCTATAAG
GAATGCGATCATTGCGAAACGAGCGAGCGAGCCTACGCCGATATTGCCCC
GCTCCTCTCGGCGCTGGCCGCGGAGTTGGGCAAAACACCGGAGGAGCTCG
TGATCTACGACCCTTACTATTGTCAAGGCTCCACCGTACGAAGACTAGCA
TCGCTAGGCTTTCCTAGGGTGTACAACCGCAAGGAAGACTTCTATAAGGT
AGTGAAGGACGGAGTGGTCCCGGAGCACGACGTGGTCGTGACGAATCCGC
CTTTCAGCGGCGACCATGTGCCCAAGATTCTTAGCTTCTGCGCTCGCAAT
GGGGGGAAGCCCTGGTTTCTCTTGATGCCCAACTACGTCTACCTCAAGGT
AGTGAAGGACGGAGTGGTCCCGGAGCACGACGTGGTCGTGACGAATCCGC
CTTTCAGCGGCGACCATGTGCCCAAGATTCTTAGCTTCTGCGCTCGCAAT
GGGGGGAAGCCCTGGTTTCTCTTGATGCCCAACTACGTCTACCTCAAGAA
CTACTACGAGTCGTCCTTGGGTCGCAGCCCTGGCGGAGGCACCACGCTGC
CCTTCTACCTCACTCCACCCAAGAGAACTACTACGAGTCGTCCTTGGGTC
GCAGCCCTGGCGGAGGCACCACGCTGCCCTTCTACCTCACTCCACCCAAG
AGGTACATGTACTACAGCCCTGCGAGATCACGGTTGAAGGTCAAAAGTTC
GGAGCGGAAAACGTCTCCTTTCAATACCTTCTGGTACATCAGCCTGGGCG
ACGGACACACCACGTCCAAGGTACATGTACTACAGCCCTGCGAGATCACG
GTTGAAGGTCAAAAGTTCGGAGCGGAAAACGTCTCCTTTCAATACCTTCT
GGTACATCAGCCTGGGCGACGGACACACCACGTCCAAGATCCTCCAGTCG
TACGACGTGGTGTCGAGGAAGGCGGACAAAGGCGCGAAGTGCTGCATTGC
AAGGACAACCCAGCAGATCCTCCAGTCGTACGACGTGGTGTCGAGGAAGG
CGGACAAAGGCGCGAAGTGCTGCATTGCAAGGACAACCCAGCAGATCCCG
TTCAAGATGATGGACTCGAACGACCCCCGCCGGAAGAAGGCGAGGGATCG
TCAGCGTAGCATAGACAGGATCCGCAAAAAACAGAGCTAGATCCCGTTCA
AGATGATGGACTCGAACGACCCCCGCCGGAAGAAGGCGAGGGATCGTCAG
CGTAGCATAGACAGGATCCGCAAAAAACAGAGCTAG
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