mRNA_P-fluviatile_contig20.4346.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig20.4346.1
Unique NamemRNA_P-fluviatile_contig20.4346.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig20.4346.1 vs. uniprot
Match: A0A6H5JVI2_9PHAE (Amino_oxidase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JVI2_9PHAE)

HSP 1 Score: 908 bits (2346), Expect = 0.000e+0
Identity = 479/633 (75.67%), Postives = 514/633 (81.20%), Query Frame = 3 
Query:   21 LSRAHDRGAHDGALDHSNEMACSVFGQAVLILVAITCKGQAFLLVP---AFRAATSSRPDVARA-RQQQPLRASAAASSPVAPASESPGVVTDEFMLGGPGRATEVVVVGAGVGGLATAARLAKAGCRVTVVEKNCEEDIGGRLNELVMEGGFRFDTGPSLLLLPETYRETFADLGRDLDDFFEMRRVSPTYKVYFDDGDSVDLSDDEADIQRQMNRLEDGGFDKYKAYMGVAQLNLEVGLPNFIEQKFAPGRLPEFALSALFNSPLENHHAQLSRRFESPKMRALLSFQDLYVGLSPYNAPAVFSLLQAIELRDGVYYPMGGFARVAEALGAVCKDLGVKFRFDCPVSEVSVVGDRGRVNCKGVVLESGEVLEADAVVCNADLPYAEKNLLPESVSRSFEHWEYSSSVIAFYWCSGRRWPQLSHHTVFLSTDWEGSWNSAFGKLPGGELGDRFNFYAAAPVRTDASVCPEGSDAIMVLVPCPSIPDDYETLENNEDDIRGERGDEGGSDGRGDR--GATARGDWVRRAREGVIREMEVSAGMEGFGDSIVGEEVYAPWDWRDRYNLRRGAVFGLSHGLNQVSLLRPGPQHPTVNGLWFCGASSRPGNGVPLVLIGAKQAAENVLTVIAGGNT 1901
            LSR+   G  +GA+       CS F +  L+L       Q F++ P   +F AATS     A   +  QP       S   A ++ S G   D  + GG   ATEVVVVGAGVGGLATAARLAKAGCRVTVVEKN EEDIGGRLNEL+MEGGFRFDTGPSLLLLPETYRETFA LGRD DDFFEMRRVSPTYKVYFDDG+SVDLSDDE +++RQM+RLED GFDKYKAY+  AQLNLEVGLPNFIE+KF PGRLPEFAL ALFNSPLENH+ QL RRF+SPKMRALLSFQDLYVGLSPYNAPAVFSLLQAIELRDGVYYPMGGFARV EALG VC+DLGVKFRFD PVSEVSVVG+ GRVN KGVVL SGEVLEADAVVCNADLPYAE+ LLP SVSRSFE+ EYS+SVIAFY CS RRWPQLSHHTVFLSTDW+ SW+SAFGKLPGGELG+ FNFYAAAP RTD SVCPE SDAIM+LVPCPSIPDDY           GE  D   +  R  R  G   R DWVRRAREGVIREME SAGMEGFGDSIVGEEVYAPW+WRDRYNLRRGAVFGLSHGLNQ+SLLRPGPQHPTVNGLWFCGASSRPGNGVPLVLIGAKQ A NVL V+ GGNT
Sbjct:   20 LSRSSSMGESEGAMLRDRPWWCSRFVRGALLLTVSGSNAQGFMMAPNAGSFFAATSGLHRAASVLKSLQPSATRITESRENALSAVSVGKEIDP-VYGGEKAATEVVVVGAGVGGLATAARLAKAGCRVTVVEKNSEEDIGGRLNELLMEGGFRFDTGPSLLLLPETYRETFAALGRDSDDFFEMRRVSPTYKVYFDDGESVDLSDDEGELRRQMDRLEDDGFDKYKAYLDSAQLNLEVGLPNFIEEKFTPGRLPEFALGALFNSPLENHYGQLRRRFDSPKMRALLSFQDLYVGLSPYNAPAVFSLLQAIELRDGVYYPMGGFARVGEALGTVCRDLGVKFRFDSPVSEVSVVGEGGRVNSKGVVLASGEVLEADAVVCNADLPYAEEALLPASVSRSFENSEYSTSVIAFYLCSNRRWPQLSHHTVFLSTDWKASWDSAFGKLPGGELGESFNFYAAAPARTDPSVCPEESDAIMILVPCPSIPDDY----------TGEIDDGASASARATRNGGGPDREDWVRRAREGVIREMEASAGMEGFGDSIVGEEVYAPWNWRDRYNLRRGAVFGLSHGLNQLSLLRPGPQHPTVNGLWFCGASSRPGNGVPLVLIGAKQVAANVLKVVEGGNT 641
[Close]
BLAST of mRNA_P-fluviatile_contig20.4346.1 vs. uniprot
Match: A0A7S0CRG6_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CRG6_9EUKA)

HSP 1 Score: 449 bits (1156), Expect = 5.430e-144
Identity = 250/541 (46.21%), Postives = 346/541 (63.96%), Query Frame = 3 
Query:  321 EVVVVGAGVGGLATAARLAKAGCR---VTVVEKNCEEDIG-GRLNELVMEGG----FRFDTGPSLLLLPETYRETFADLGRDLDDFFEMRRVSPTYKVYFDDGDSVDLSDDEADIQRQMNRLEDGGFDKYKAYMGVAQLNLEVGLPNFIEQKFAPG--RLPEFALSALFNSPLENHHAQLSRRFESPKMRALLSFQDLYVGLSPYNAPAVFSLLQAIELRDGVYYPMGGFARVAEALGAVCKDLGVKFRFDCPVSEVSVVGDRGRVNCKGVVLESGEVLEADAVVCNADLPYAEKNLL-PESVSRSFEHWE----YSSSVIAFYWCSGRRWPQLSHHTVFLSTDWEGSWNSAFGKLPGGE-LGD------RFNFYAAAPVRTDASVCPEGSDAIMVLVPCPSIPDDYETLENNEDDIRGERGDEGGSDGRGDRGATARGDWVR-RAREGVIREMEVSAGMEGFGDSIVGEEVYAPWDWRDRYNLRRGAVFGLSHGLNQVSLLRPGPQHPTVNGLWFCGASSRPGNGVPLVLIGAKQAAENV 1874
            ++V++GAGVGGLA AARLAK   +   + V+EKN   + G GR+ E+ + G     +RF+TGPSL+LLP+ YR+ F D+G D+D FF+++RV P ++  F D  SV  SDD+AD+QRQ+N LE  GF KY++YM  A  NL+ GLP FI+Q  A G  +LPEF  + L   PL +HH QL + F++ +M+AL+SFQDLY+GLSPY APAVFSLLQ+IE   G+YYP+GGF+++++AL  VC++ GV+ ++D PVS + V  +  +    G+ +     ++AD ++ N DL Y+E NLL P+   + F+  E    +SSSVI+  W + +R+  L HH+VFLST++E SW   F     G+ L D       FNFY  AP RTD S CPEG D+IMVLVP P + +     E  E + R                       V+   RE VI+  E  AGM+ F   IVGE +  P  WR++YNLRRG+VFGL+H + Q+SL RP P+HPT+  L+F GAS+ PGNGVPLVL+GA+Q AE +
Sbjct:    8 DIVIIGAGVGGLAMAARLAKNKKKFEKIKVLEKNSRPEAGAGRVGEITLRGPNEEIYRFETGPSLMLLPDIYRKLFTDIGYDMDSFFKIQRVMPAFRAIFSDNISVTFSDDQADMQRQLNALEIDGFQKYQSYMKWADTNLDAGLPLFIQQDLASGAPKLPEFLFNCLRYWPLFSHHKQLGQFFDTDRMKALMSFQDLYIGLSPYEAPAVFSLLQSIEYTRGIYYPIGGFSKISQALIQVCEENGVEIQYDSPVSRILVNAENNKA--MGIEINEKTNVKADIIIANPDLCYSELNLLKPQEQRQGFKELEKTLKHSSSVISICWATRKRFDTLCHHSVFLSTNYEKSWEGIFTWEDFGKSLTDCQKSYKDFNFYVHAPSRTDPSACPEGHDSIMVLVPSPPVDESLSLEEARERERR-----------------------VKFEVREAVIQRFE-DAGMKDFRSHIVGESIRTPTQWREKYNLRRGSVFGLAHPMQQLSLFRPQPKHPTIRDLYFVGASTTPGNGVPLVLVGAEQVAEQI 522
[Close]
BLAST of mRNA_P-fluviatile_contig20.4346.1 vs. uniprot
Match: A0A6U4CWI0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CWI0_9STRA)

HSP 1 Score: 450 bits (1157), Expect = 8.920e-144
Identity = 263/582 (45.19%), Postives = 350/582 (60.14%), Query Frame = 3 
Query:  174 TSSRPDVARARQQQPLRASAAASSP-------VAPASESPGVVTDEFMLGGPGRATEVVVVGAGVGGLATAARLAKAGCRVTVVEKNCEEDIGGRLNELVMEGGFRFDTGPSLLLLPETYRETFADLGRDLDDFFEMRRVSPTYKVYFDDGDSVDLSDDEADIQRQMNRLEDGGFDKYKAYMGVAQLNLEVGLPNFIEQKFAPGRLPEFALSALF--NSPLENHHAQLSRRFESPKMRALLSFQDLYVGLSPYNAPAVFSLLQAIELRDGVYYPMGGFARVAEALGAVCKDLGVKFRFDCPVSEVSVVGDRGRVNCKGVVLESGEVLEADAVVCNADLPYAEKNLLPESVSRSFEHWEYSSSVIAFYWCSGRRWPQLSHHTVFLSTDWEGSWNSAF--GKLPGGELGDRFNFYAAAPVRTDASVC--PEGS-DAIMVLVPCPSIPDDYETLENNEDDIRGERGDEGGSDGRGDRGATARGDWVRRAREGVIREMEVSAGMEGFGDSIVGEEVYAPWDWRDRYNLRRGAVFGLSHGLNQVSLLRPGPQHPTVNGLWFCGASSRPGNGVPLVLIGAKQAAENVL 1877
            TS R  + RAR   P+    A  +P        APAS +    +        G    V +VGAGVG L +AA LA+ G +V + EKN E+ +GGR+N+ V+EG  RF+ GPSLLLLP+ YR+TFA  G DLD+   + RV PTYK YFDDG    L   + D +  +  +E G +++YK YM  A++NLE G PNFIE+K     LP+F  +AL   N PL +H+  L + F++ K+ AL SFQDLYVGLSPYNAPAVFSLL AIEL DGVYYP+GGF ++ +AL   C++LGVKF F   V ++SV G        GV L+ G  +E+D V+ N DLP+ E+ ++P    R  E+ EYS+ V++FY+ + +R+  L HHT+ LSTD+E SW+     GK P       FNFY  AP RTD SV   P G  D+IMVLVP P +P          DD   ER  +               +W  +AR GVI++     GM+ F   IVGE+V  P DW   YN+ RGAVFGLS  ++Q+S LRP P+HP ++ L+F GAS+RPGNGVPLV+ GA+   E ++
Sbjct:   18 TSFRTSLRRARAMPPVTRLRALETPDVDVAGTAAPASAAGAAQS--------GGGKSVTIVGAGVGSLVSAALLAQDGYKVEIFEKNPEDQVGGRINQAVIEG-CRFELGPSLLLLPDVYRKTFAACGLDLDEEMTIARVDPTYKAYFDDGTGFVLDPRDPDFKGNLEAIEAGSYEQYKKYMESAEINLEGGWPNFIEEKLTLDVLPKFIANALTPRNFPLLSHNQHLKQYFKTKKLNALFSFQDLYVGLSPYNAPAVFSLLTAIELSDGVYYPIGGFHQIPKALRRRCEELGVKFNFGAGVKKISVEGRAAA----GVELDDGRSVESDLVIANPDLPFVEETMIPAEKKRHTENMEYSTPVVSFYFATDKRFDALGHHTICLSTDYERSWDDIVVEGKFP-----PNFNFYVHAPSRTDPSVIQRPGGEGDSIMVLVPTPPLPAGI-------DDAEKERISQ---------------EWYEQARAGVIKQFGKMPGMQDFEKHIVGEQVRTPADWGKLYNMNRGAVFGLSCKISQLSFLRPSPRHPNIDNLYFVGASTRPGNGVPLVMTGARLLHERIM 559
[Close]
BLAST of mRNA_P-fluviatile_contig20.4346.1 vs. uniprot
Match: A0A0G4G440_VITBC (Amino_oxidase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G440_VITBC)

HSP 1 Score: 427 bits (1097), Expect = 1.080e-133
Identity = 242/559 (43.29%), Postives = 336/559 (60.11%), Query Frame = 3 
Query:  327 VVVGAGVGGLATAARLAKAGCRVTVVEKNCEEDIGGRLNELVME---GGFRFDTGPSLLLLPETYRETFADLGRDLDDFFEMRRVSPTYKVYFDDGDSVDLS-DDEADIQRQMNRLEDGGFDKYKAYMGVAQLNLEVGLPNFIEQKFAPGRLPEFALSALFNSPLENHHAQLSRRFESPKMRALLSFQDLYVGLSPYNAPAVFSLLQAIELRDGVYYPMGGFARVAEALGAVCKDLGVKFRFDCPVSEVSV---VGDRGRVNCKGVVLE-------------------------SGEVLEADAVVCNADLPYAEKNLLPE---------SVSRSFEHWEYSSSVIAFYWCSGRRWPQLSHHTVFLSTDWEGSWNSAFGKLPGGELG-DRFNFYAAAPVRTDASVCPEGSDAIMVLVPCPSIPDDYETLENNEDDIRGERGDEGGSDGRGDRGATARGDWVRRAREGVIREMEVSAGMEGFGDSIVGEEVYAPWDWRDRYNLRRGAVFGLSHGLNQVSLLRPGPQHPTVNGLWFCGASSRPGNGVPLVLIGAKQAAENVL 1877
            +VVGAG+GGL TA RLA+ G  VTV+EKN E  +GGR+ E ++E   G FRFDTG SL L+PE + ETF+ LG  L D  ++R+V P Y ++++DG +++L+  + A ++ Q+++LED G+DK+  Y+  A  N   G+PNFI+ +F+   +  F  S L   PL +HH +  R F +PK++AL++FQDLYVGLSPY+APAVFSLLQAIE + GV+YP+GG+  VA+ L  + + LGVK  F+  V E+ V   +        +GV+++                         +  ++ +D VV NADLP+AE++LL           S+ R F  W+YS+SV+A YW    R P L+HH +FLS+++  SW S F            FNFY  A  RTD S CPEG D IMVLVP P++    E +  +E     +R                    V  AREGV+R ME   GME    S++ E V +P DW+  YNLRRGAVFGL+H L Q+ + RPGP+HPT+  L+  GAS+RPGNGVPLVL+GAKQ AE ++
Sbjct:   74 IVVGAGIGGLVTAGRLAREGFDVTVLEKNSEAMVGGRVGEELVETSKGRFRFDTGASLFLMPEIFEETFSSLGVALHDAIDLRKVEPPYMIFYEDGTALNLTMSNRALLKEQLDQLEDDGYDKFMRYLDAADGNRLFGVPNFIQFEFSFDSINAFLKSLLSMWPLSSHHTEAGRFFSNPKLQALVTFQDLYVGLSPYSAPAVFSLLQAIEFKQGVFYPVGGYHTVAKKLLQIVRSLGVKVHFNTNVKEILVSRTLLSPSGYEAEGVLIDKPGRDDEAAKLEASLPRSRLRDMGKTAMMVSSDIVVVNADLPFAEEHLLKTPPALPSFAPSIGRDFSQWDYSTSVVALYWSFKDRLP-LNHHNIFLSSEYRTSWASLFDTTSNAAFNASAFNFYVHASSRTDPSACPEGCDNIMVLVPVPALD---ERMSADEQQRLVDR-------------------TVSDAREGVLRRMEAVPGMENIRSSLLHEFVRSPMDWKRLYNLRRGAVFGLAHPLRQLVIFRPGPKHPTIGNLYAVGASARPGNGVPLVLVGAKQTAERIV 609
[Close]
BLAST of mRNA_P-fluviatile_contig20.4346.1 vs. uniprot
Match: A0A835Z7G4_9STRA (Amino_oxidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7G4_9STRA)

HSP 1 Score: 414 bits (1064), Expect = 1.410e-132
Identity = 215/395 (54.43%), Postives = 274/395 (69.37%), Query Frame = 3 
Query:  696 MGVAQLNLEVGLPNFIEQKFAPGRLPEFALSALFNSPLENHHAQLSRRFESPKMRALLSFQDLYVGLSPYNAPAVFSLLQAIELRDGVYYPMGGFARVAEALGAVCKDLGVKFRFDCPVSEVSVVGDRGRVNCKGVVLESGEVLEADAVVCNADLPYAEKNLLPESVSRS-FEHWEYSSSVIAFYWCSGRRWPQLSHHTVFLSTDWEGSWNSAFGKLPGGELGDRFNFYAAAPVRTDASVCPEGSDAIMVLVPCPSIPDDYETLENNEDDIRGERGDEGGSDGRGDRGATARGDWVRRAREGVIREMEVSAGMEGFGDSIVGEEVYAPWDWRDRYNLRRGAVFGLSHGLNQVSLLRPGPQHPTVNGLWFCGASSRPGNGVPLVLIGAKQAAENVL 1877
            M  AQ NL+VG PNFI Q+ +   +P+FAL++L NSP E HH QL RRF+SPK++A+LSFQDLYVGL+PY+APAVFSLLQAIEL +GVYYP+GGF +VA+ L  +C++LGVKF+F+  V E+ V G           L+ GE+L++D +V NADLPY E NLLPE   R      EYSS V+AFYW   R+WPQL+HHTVFLSTD+ GSW+  F +   G  G  FNFY AA  RTD SVCPEG DAIMVLVPCP +P   E  ++        R   GG D   +        W+  AR+GV+++ E +AGM GF DSI  E VY P DW+ RY+L RGA FGL+H LNQ+++ RP P+HP V+ L+F GAS+RPGNG+PLVL GA+  A++V+
Sbjct:    1 MEYAQRNLDVGWPNFIAQQLSLNGMPQFALASLLNSPFEAHHKQLQRRFKSPKLQAMLSFQDLYVGLTPYSAPAVFSLLQAIELNEGVYYPVGGFHKVAKGLLTICRELGVKFKFNSAVDEILVGG-----KIYAYELQGGELLQSDVIVANADLPYVELNLLPEQFRRKGLGDAEYSSGVVAFYWGCDRQWPQLAHHTVFLSTDYAGSWDRVFKQQRMGSGG--FNFYCAAASRTDPSVCPEGHDAIMVLVPCPLLPPTPEGGDS--------RTQAGGRDWDAEVAQ-----WMETARKGVLQQFEEAAGMAGFADSIRAELVYTPRDWQQRYSLERGAAFGLAHSLNQLAIFRPSPRHPNVDDLYFVGASTRPGNGLPLVLTGARLVADDVV 375
[Close]
BLAST of mRNA_P-fluviatile_contig20.4346.1 vs. uniprot
Match: A0A7S4DMK3_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DMK3_9EUKA)

HSP 1 Score: 368 bits (945), Expect = 1.330e-113
Identity = 210/501 (41.92%), Postives = 294/501 (58.68%), Query Frame = 3 
Query:  528 DLGRDLDDFFEMRRVSPTYKVYFDDGDSVDLSDDEADIQRQMNRLEDGGFDKYKAYMGVAQLNLEVGLPNFIEQKFAPGR--LPEFALSALFNSPLENHHAQLSRRFESPKMRALLSFQDLYVGLSPYNAPAVFSLLQAIELRDGVYYPMGGFARVAEALGAVCKDLGVKFRFDCPVSEVSVVGDRGRVNCKGVVLE------------------------------------SGEVLEADAVVCNADLPYAEKNLL---PESVSRSFEHWE----YSSSVIAFYWCSGRRWPQ-LSHHTVFLSTDWEGSWNSAFGKLPGGELG-----DRFNFYAAAPVRTDASVCPEGSDAIMVLVPCPSIPDDYETLENNEDDIRGERGDEGGSDGRGDRGATARGDWVRRAREGVIREMEVSAGMEGFGDSIVGEEVYAPWDWRDRYNLRRGAVFGLSHGLNQVSLLRPGPQHPTVNGLWFCGASSRPGNGVPLVLIGAKQAAENVL 1877
            D+G+D+D+   ++RV P ++V F DG SV LSDDE  ++++++ LE  G+DKY+ YM +A +NL+ GLP FIEQ +  G   LP+F ++AL + PL++HH QL   FES +M+AL SFQDLY+GLSPY AP VFSLLQ+IEL +G+YYP+GGFA++AE +  +C+D+GVK  +D  VS++       RV  +GV                                         ++  AD +V NADLPY E  LL   PE++   FE  E    YSSSV++  W   +R+   L+HH++FLS  +  SW++ F      +L        FNFY  AP RTD S CP   D+IMVLVP P + ++  +LE    DIR                  A      +ARE VI+  E  AGM  F  SIV E +  P +W+  +NLRRG+VFG++H ++Q+SL RP P+HP +  L+  GAS+RPGNGVPLVL+GA+Q A ++L
Sbjct:    1 DVGKDMDEHISIQRVMPAFRVNFADGASVTLSDDEEKMRKELDSLEIDGYDKYRRYMEMADINLDAGLPLFIEQDWEKGLPVLPKFLINALLHWPLKSHHDQLGEFFESDRMKALFSFQDLYIGLSPYTAPGVFSLLQSIELTNGIYYPIGGFAKIAEKMKTLCEDMGVKIHYDTSVSQIQADPSTRRV--QGVRYNHHPSEGEXXXXXXXXXXXXXXXXXXEKNSMSQKKSHDNQLFSADVIVSNADLPYTEMELLRETPETMRDGFEQREKKFKYSSSVVSICWAVKKRYDTALAHHSIFLSDKYRSSWDNVFEPTDRPDLVFPDDYKDFNFYVHAPSRTDPSCCPSNHDSIMVLVPAPPLAEEGGSLE----DIR-----------------DAEERLKAKAREAVIKRFE-DAGMTDFRSSIVDESIRGPLEWKQLFNLRRGSVFGIAHPMDQLSLFRPSPEHPKLKNLFSVGASTRPGNGVPLVLVGAEQVARSIL 477
[Close]
BLAST of mRNA_P-fluviatile_contig20.4346.1 vs. uniprot
Match: A0A061RJY1_9CHLO (Phytoene dehydrogenase (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RJY1_9CHLO)

HSP 1 Score: 369 bits (946), Expect = 5.800e-113
Identity = 231/542 (42.62%), Postives = 310/542 (57.20%), Query Frame = 3 
Query:  315 ATEVVVVGAGVGGLATAARLAKAGCRVTVVEKNCEEDIGGRLNELVMEGGFRFDTGPSLLLLPETYRETFADLGRDLDDFFEMRRVSPT-YKVYFD-DGDSVDLSDDEADIQRQMNRLEDGGFDKYKAYMGVAQLNLEVGLPNFIEQKFAP-------GRLPEFALSALFNSPLENHHAQLSRRFESPKMRALLSFQDLYVGLSPYNAPAVFSLLQAIELRDGVYYPMGGFARVAEALGAVCKDLGVKFRFDCPVSEVSVVGDRGRVNCKGVVLESGEVLEADAVVCNADLPYAEKNLLPESV----SRSFEHWEYSSSVIAFYWCSGRRWPQLSHHTVFLSTDWEGSWNSAFGKLPGGELGDRFNFYAAAPVRTDASVCPE-GSDAIMVLVPCPSIPDDYETLENNEDDIRGERGDEGGSDGRGDRGATARGDWVRRAREGVIREMEVSAGMEGFGDSIVGEEVYAPWDWRDRYNLRRGAVFGLSHGLNQVSLLRPGPQHPTVNGLWFCGASSRPGNGVPLVLIGAKQAAENVLTVIAGGN 1898
            A  VVVVG GVGGLA+A R+A+ G +VTV+EKN +  +GGR+  + ++G FRFDTGPSLLL  E Y E F DLG  L+DF  +RRV P  Y+V+F  D   +DL  D   + RQ+   E+G    Y  ++  A+  L++G  NFIE+ F          +L     S      L  H +++++RF  P+++A+ +FQDLYVGLSPY AP VFSLL A EL DGV+YP GGF ++ + L    K  GV+      V  +SV  DR      GV +  GE LEADAVVCN D+  +   LL  +     +      +YS+ VIAF WC  +R+ +L HH +FLS ++  SWN A  + P  EL +  NFY   P RTD +  PE G+D++MVL+P          + N +D     RG E        +G     D VR  RE V R +E+  G+  F D I  E V  P  W +RY L+ GA FGLSH L+Q+++ RPG +     GL+FCGAS+RPGNGVPLVL+G+K  AE VL     G 
Sbjct:   41 AKHVVVVGGGVGGLASAGRIARGGHKVTVIEKNPQ--VGGRMQSVTIDG-FRFDTGPSLLLFKEKYEEAFRDLGARLEDFVTVRRVEPAAYRVFFAADKSRLDLLYDVQAMFRQLEDAEEGAGRSYLRFLAEARAALDLGTKNFIERDFDGLGDFLDLAKLIPLLRSVSVGELLGRHASRMAKRFRDPRLQAMFTFQDLYVGLSPYEAPGVFSLLAATELTDGVWYPEGGFGKIRDGLEEAAKKNGVRVLRGTEVVSISVDADR----VAGVTVSGGEYLEADAVVCNNDVANS-YGLLSSTYGSEQAADVSALKYSAGVIAFNWCVNKRFTELLHHNIFLSGEYRNSWNLA--RSPS-ELVENPNFYVHVPARTDPTAVPELGTDSVMVLLP----------VANKKD-----RGIE--------QGKADFSDMVRAGREAVFRTLELH-GLADFQDHIKSEHVIDPQQWEERYALKHGAAFGLSHPLSQLAVFRPGVKDRKTKGLYFCGASTRPGNGVPLVLMGSKLTAEKVLADFEAGE 547
[Close]
BLAST of mRNA_P-fluviatile_contig20.4346.1 vs. uniprot
Match: W7TM00_9STRA (Phytoene dehydrogenase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM00_9STRA)

HSP 1 Score: 371 bits (952), Expect = 2.380e-112
Identity = 242/616 (39.29%), Postives = 316/616 (51.30%), Query Frame = 3 
Query:  321 EVVVVGAGVGGLATAARLAKA----GCRVTVVEKNCEEDIGGRLNELVMEGGFRFDTGPSLLLLPETYRETFADLGRDL-------------DDFFE---------------------------------MRRVSPTYKVYFDDGDSVDLSDDEADIQRQMNRLEDGGFDKYKAYMGVAQLNLEVGLPNFIEQKFAPGRLPEFALSALFNS---PLENHHAQLSRRFESPKMRALLSFQDLYVGLSPYNAPAVFSLLQAIELRDGVYYPMGGFARVAEALGAVCKDLGVKFRFDCPVSEVSVVGDRGRVNCKGVVLESGEVLEADAVVCNADLPYAEKNLLPESVSRSFEHWE--YSSSVIAFYWCSGRRWPQLSHHTVFLSTDWEGSWNSAFGKLPGGELGDR-----------------------FNFYAAAPVRTDASVCPEGSDAIMVLVPCPSIPDDYETLENNEDDIRGERGDEGGSDGRGDRGATARGDWVRRAREGVIREMEVSAGMEGFGDSIVGEEVYAPWDWRDRYNLRRGAVFGLSHGLNQVSLLRPGPQHP-------------------TVNGLWFCGASSRPGNGVPLVLIGAKQAAENVL 1877
            ++VV+GAG+GGL TA RLA+A       +T+VEKN  E  GGRL E   EG  R++TGPSLLLLP+ Y E F  LG                DD                                    + +V P+Y V F D D ++L  + + +   +NRLE GGF +Y+ Y+  AQ NL+ GL  FI++       P F  +   N+   PL +HH QL   F+S K++A LSFQDLYVGL+PY APAVFSLLQAIEL  GV+YP+GGFA+V+  L  + +  GV   FD PV+E+ V      +  +GV L++  VL AD VV N DLPY  K L     ++S +H    +SSSVI+F W   R  P L HHT FL+   E    +  G+  GG  G +                        NFY  AP RTD SVCP G DA+MVLVPCP +                  G EGG        A      +  ARE V+   E    ME   DS++ E V  P +WR++Y+L RGAVFGL H L Q+S+LRPG +H                     + G+++CGASSRPGNGVPLV++GAK  +E +L
Sbjct:   70 QIVVIGAGIGGLVTAGRLARATRGRNVSITIVEKNDRESAGGRLGEYTWEG-HRWETGPSLLLLPDVYMEIFEHLGGSFPSASNSTTERTSKDDMTRTSAVKCGGGRWERQAEPPIASGGSVSDGIGPSRLTKVEPSYLVIFGDNDRLELYSNRSRMVEAINRLEPGGFPRYQDYLESAQNNLDFGLSAFIKESPQWEYFPAFCRNLNLNARFWPLASHHRQLEGLFDSKKLQAALSFQDLYVGLTPYEAPAVFSLLQAIELNQGVFYPLGGFAQVSRELLRLVEANGVCCLFDSPVAEILVESAGTGLRTRGVRLQNHHVLPADLVVSNVDLPYTNKYLFSRLHAQSKDHDTRGFSSSVISFLWAFDRPLPSLRHHTTFLAAR-EEEVEAEGGRKEGGRSGAKEGIDPAKAAWEAVFKDKRFDGRFLNFYVHAPARTDTSVCPPGHDAVMVLVPCPVL------------------GKEGGXXXXXXXXARM----IADAREAVLARFESVMRMEDVRDSLIHERVIGPREWREKYSLSRGAVFGLKHDLGQLSVLRPGRKHVGGRKRLGEGGKEEGREGGGAIEGMYYCGASSRPGNGVPLVMVGAKLLSEMIL 661
[Close]
BLAST of mRNA_P-fluviatile_contig20.4346.1 vs. uniprot
Match: A0A2R6XW20_MARPO (Amino_oxidase domain-containing protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XW20_MARPO)

HSP 1 Score: 358 bits (920), Expect = 8.650e-109
Identity = 220/549 (40.07%), Postives = 307/549 (55.92%), Query Frame = 3 
Query:  318 TEVVVVGAGVGGLATAARLAKAGCRVTVVEKNCEEDIGGRLNELVME------------GG---FRFDTGPSLLLLPETYRETFADLGRDLDDFFEMRRVSPT-YKVYFDDGDSVDLSDDEADIQR---QMNRLEDGGFDKYKAYMGVAQLNLEVGLPNFIEQKFAP----GRLPEFALSALFNSPLE---NHHAQLSRRFESPKMRALLSFQDLYVGLSPYNAPAVFSLLQAIELRDGVYYPMGGFARVAEALGAVCKDLGVKFRFDCPVSEVSVVGDRGRVNCKGVVLESGEVLEADAVVCNADLPYAEKNLLPESVSRSFEHW---EYSSSVIAFYWCSGRRWPQLSHHTVFLSTDWEGSWNSAFGKLPGGELGDRFNFYAAAPVRTDASVCPEGSDAIMVLVPCPSIPDDYETLENNEDDIRGERGDEGGSDGRGDRGATARGDWVRRAREGVIREMEVSAGMEGFGDSIVGEEVYAPWDWRDRYNLRRGAVFGLSHGLNQVSLLRPGPQHPTVNGLWFCGASSRPGNGVPLVLIGAKQAAENVL 1877
            T+VV+VG GVGGLA   RLAK G  V ++EKN    +GGRL  L +E            GG   FRFDTGPSLLLLP+ YR+ F  +G D+DD+  +++V P  Y+V+F + + V   D   D+Q+   Q+ ++E+G    +  ++  A+  L+ G  +FIE+ F        +P         SP+E    HH+ +   F++PK++A+ +FQDLYVGL+PYNAP VFSLL A EL DGV+YP+GGFA+V + L    + +G        V  +    D      +GV LE G  + A+ VV NADLPY   +LL   V          +YS+SVIAF W    R  +LSHH VFLS  +E SW+ A        + +R NFY  AP RTD++VCP G+DAI VL+P   + + + ++ +  DD +                       V  ARE VI  + V +G+      I+ E VY+P  W+D YNL+ GA FGL+H L Q++  RP    P++ GL+F GAS+RPGNGVPLVL+GAK     +L
Sbjct:   53 TKVVIVGGGVGGLAVGGRLAKEGYDVHILEKNSH--VGGRLQSLEVEAAVGVGGKSDDPGGQECFRFDTGPSLLLLPQKYRDAFTAMGEDMDDYVTLKKVEPAAYRVFFGEDEGVQSLDLLYDVQKMCLQLEQVEEGAGGAFLRFLANAKEALDKGTASFIERDFKSFWDYADVPRLLPLLKHLSPIELLGQHHSTMRNYFKNPKLQAMFTFQDLYVGLTPYNAPGVFSLLAATELTDGVWYPVGGFAKVRDGLAQAAQKVGATITTKATVKRI----DHANGQVQGVTLEDGTFMRANIVVANADLPYVYNSLLGSKVKTQASKLLSSKYSASVIAFQWALSSRLERLSHHNVFLSNCYEESWHRA---TDASTILERPNFYVHAPSRTDSTVCPLGTDAITVLLPVAHLGEGF-SIGSASDDKQ----------------------IVEAARERVISSL-VRSGIGDISSMILSEVVYSPPTWQDSYNLQYGAAFGLAHNLLQLAYFRPDVAEPSIKGLYFAGASTRPGNGVPLVLMGAKVTTNRIL 568
[Close]
BLAST of mRNA_P-fluviatile_contig20.4346.1 vs. uniprot
Match: A0A7S2R9P3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9P3_9STRA)

HSP 1 Score: 358 bits (919), Expect = 1.080e-108
Identity = 238/571 (41.68%), Postives = 311/571 (54.47%), Query Frame = 3 
Query:  303 GPGRATEVVVVGAGVGGLATAARLAKAGCRVTVVEKNCEEDIGGRLNELVMEG-----GFRFDTGPSLLLLPETYRETFADLGR-DLDDFFEMRRVSPT----YKVYFDD------------GDSVDLSDDEADIQRQMNRLEDGGFDKYKAYMGVAQLNLEVGLPNFIEQKFAPGRLPEFALSALFNS--PLENHHAQLSRRFESPKMRALLSFQDLYVGLSPYNAPAVFSLLQAIEL--------------RDGVYYPMGGFARVAEALGAVCKDLGVKFRFDCPVSEVSVVGDRGRVNCKGVVLESGEVLEADAVVCNADLPYAEKNLLPESVSRSFEHWEYSSSVIAFYWCSGRRWPQLSHHTVFLSTD--------WEGSWNSAFGKLPGGELGDRFNFYAAAPVRTDASVCPEGSDAIMVLVPCPSI-PDDYETLENNEDDIRGERGDEGGSDGRGDRGATARGDWVRRAREGVIREMEVSAGMEGFGDSIVGEEVYAPWDWRDRYNLRRGAVFGLSHGLNQVSLLRPGPQHPTVNGLWFCGASSRPGNGVPLVLIGAKQAAENV 1874
            G G A +VVVVGAG+GGL++AARLA  G RV +VEKN  +  GGR     ++G      +RFD GPSLLLLP+ Y   F + G  DL       RV+P     Y ++ D             G    LS D+A    Q   LE GG  KY+A++  +Q  L+ GLPNFI  +     L + A  ALF    PLE+  +Q+ RRF S   RA L+FQ LYVGL+P+ AP+VF+LLQ +EL              R G++YP+GGF  V+ +L  + +D GV+F +D PV +V VV + GR    GV L +G+V++A AV+ N DLP AE  LLP+S  R F   ++S SV++F+W        LSHHT+FL           WE  W SAF     G      NFY  AP RTD S CPEG DAI VLVP P + P   E  +                           G  V RAR  V+ +    AGM+     +V E+V +   W+  + L RG+VFGLSH L+Q+S  RPGP+ P V GL++CGAS+RPGNGVPLVL+GAKQ    +
Sbjct:   37 GSGEAFDVVVVGAGIGGLSSAARLAAQGQRVCIVEKNSLDLAGGRAGSFEIQGRGGDGSYRFDRGPSLLLLPDVYEAAFKEAGGGDLWASHVEPRVTPVAAPLYTMFLDRAPGLPLSPMVLRGGEQGLSHDKA----QFEALEVGGGAKYEAHIRQSQRILDGGLPNFISGQLRLPALLQMAQEALFGGAFPLESQDSQICRRFSSTLARAALTFQSLYVGLTPFEAPSVFNLLQPLELGPVPDPHRAEQDPCRQGIFYPVGGFGEVSRSLVRLAQDAGVQFYWDSPVDQV-VVDETGRAT--GVRLTTGDVVDAAAVLVNVDLPMAEATLLPKSQKRDFSTSQFSCSVVSFHWALNTTLKPLSHHTLFLEAQSEARRQQSWE--WESAFSSRGEGPA----NFYVHAPARTDPSACPEGHDAITVLVPAPGLRPSSEEAYDT--------------------------GVVVSRARAFVLEQFR-RAGMD-VEKHLVAEQVVSAPKWKQDFGLERGSVFGLSHPLSQLSFFRPGPRSPGVRGLYYCGASARPGNGVPLVLLGAKQTVSAI 566
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig20.4346.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVI2_9PHAE0.000e+075.67Amino_oxidase domain-containing protein n=2 Tax=Ec... [more]
A0A7S0CRG6_9EUKA5.430e-14446.21Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A6U4CWI0_9STRA8.920e-14445.19Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A0G4G440_VITBC1.080e-13343.29Amino_oxidase domain-containing protein n=2 Tax=Vi... [more]
A0A835Z7G4_9STRA1.410e-13254.43Amino_oxidase domain-containing protein n=1 Tax=Tr... [more]
A0A7S4DMK3_9EUKA1.330e-11341.92Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A061RJY1_9CHLO5.800e-11342.62Phytoene dehydrogenase (Fragment) n=1 Tax=Tetrasel... [more]
W7TM00_9STRA2.380e-11239.29Phytoene dehydrogenase n=1 Tax=Nannochloropsis gad... [more]
A0A2R6XW20_MARPO8.650e-10940.07Amino_oxidase domain-containing protein n=3 Tax=Ma... [more]
A0A7S2R9P3_9STRA1.080e-10841.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig20contigP-fluviatile_contig20:1453616..1465877 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score911.4
Seed ortholog evalue2.3e-262
Seed eggNOG ortholog2880.D7FLI6
KEGG rclassRC01214,RC02605
KEGG koko:K15745
KEGG ReactionR04787,R04798,R04800,R07518,R09692
KEGG Pathwayko00906,ko01100,ko01110,map00906,map01100,map01110
EggNOG free text desc.all-trans-retinol 13,14-reductase activity
EggNOG OGsCOG1233@1,KOG4254@2759
EC1.3.99.30
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionPhytoene desaturase CrtI family
Ec32 orthologEc-17_001040.3
Exons13
Model size2998
Cds size1827
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815907.629338-UTR-P-fluviatile_contig20:1453615..14547091622815907.629338-UTR-P-fluviatile_contig20:1453615..1454709Porterinema fluviatile SAG_2381UTRP-fluviatile_contig20 1453616..1454709 -
1693563689.5810263-UTR-P-fluviatile_contig20:1453615..14547091693563689.5810263-UTR-P-fluviatile_contig20:1453615..1454709Porterinema fluviatile SAG_2381UTRP-fluviatile_contig20 1453616..1454709 -
1622815907.793862-UTR-P-fluviatile_contig20:1465800..14658771622815907.793862-UTR-P-fluviatile_contig20:1465800..1465877Porterinema fluviatile SAG_2381UTRP-fluviatile_contig20 1465801..1465877 -
1693563690.8377488-UTR-P-fluviatile_contig20:1465800..14658771693563690.8377488-UTR-P-fluviatile_contig20:1465800..1465877Porterinema fluviatile SAG_2381UTRP-fluviatile_contig20 1465801..1465877 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815907.6434014-CDS-P-fluviatile_contig20:1454709..14549201622815907.6434014-CDS-P-fluviatile_contig20:1454709..1454920Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1454710..1454920 -
1693563689.5988817-CDS-P-fluviatile_contig20:1454709..14549201693563689.5988817-CDS-P-fluviatile_contig20:1454709..1454920Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1454710..1454920 -
1622815907.6559355-CDS-P-fluviatile_contig20:1455631..14559581622815907.6559355-CDS-P-fluviatile_contig20:1455631..1455958Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1455632..1455958 -
1693563689.6072028-CDS-P-fluviatile_contig20:1455631..14559581693563689.6072028-CDS-P-fluviatile_contig20:1455631..1455958Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1455632..1455958 -
1622815907.6692538-CDS-P-fluviatile_contig20:1456718..14568731622815907.6692538-CDS-P-fluviatile_contig20:1456718..1456873Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1456719..1456873 -
1693563689.6163228-CDS-P-fluviatile_contig20:1456718..14568731693563689.6163228-CDS-P-fluviatile_contig20:1456718..1456873Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1456719..1456873 -
1622815907.6795719-CDS-P-fluviatile_contig20:1457212..14573651622815907.6795719-CDS-P-fluviatile_contig20:1457212..1457365Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1457213..1457365 -
1693563689.625285-CDS-P-fluviatile_contig20:1457212..14573651693563689.625285-CDS-P-fluviatile_contig20:1457212..1457365Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1457213..1457365 -
1622815907.6928418-CDS-P-fluviatile_contig20:1458084..14582071622815907.6928418-CDS-P-fluviatile_contig20:1458084..1458207Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1458085..1458207 -
1693563689.6339972-CDS-P-fluviatile_contig20:1458084..14582071693563689.6339972-CDS-P-fluviatile_contig20:1458084..1458207Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1458085..1458207 -
1622815907.7029288-CDS-P-fluviatile_contig20:1459040..14590841622815907.7029288-CDS-P-fluviatile_contig20:1459040..1459084Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1459041..1459084 -
1693563689.6438282-CDS-P-fluviatile_contig20:1459040..14590841693563689.6438282-CDS-P-fluviatile_contig20:1459040..1459084Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1459041..1459084 -
1622815907.7139366-CDS-P-fluviatile_contig20:1459944..14601131622815907.7139366-CDS-P-fluviatile_contig20:1459944..1460113Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1459945..1460113 -
1693563689.659121-CDS-P-fluviatile_contig20:1459944..14601131693563689.659121-CDS-P-fluviatile_contig20:1459944..1460113Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1459945..1460113 -
1622815907.7250369-CDS-P-fluviatile_contig20:1461704..14618391622815907.7250369-CDS-P-fluviatile_contig20:1461704..1461839Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1461705..1461839 -
1693563689.6692922-CDS-P-fluviatile_contig20:1461704..14618391693563689.6692922-CDS-P-fluviatile_contig20:1461704..1461839Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1461705..1461839 -
1622815907.737408-CDS-P-fluviatile_contig20:1462534..14625931622815907.737408-CDS-P-fluviatile_contig20:1462534..1462593Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1462535..1462593 -
1693563689.678716-CDS-P-fluviatile_contig20:1462534..14625931693563689.678716-CDS-P-fluviatile_contig20:1462534..1462593Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1462535..1462593 -
1622815907.7476485-CDS-P-fluviatile_contig20:1463392..14634401622815907.7476485-CDS-P-fluviatile_contig20:1463392..1463440Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1463393..1463440 -
1693563689.6881006-CDS-P-fluviatile_contig20:1463392..14634401693563689.6881006-CDS-P-fluviatile_contig20:1463392..1463440Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1463393..1463440 -
1622815907.7571013-CDS-P-fluviatile_contig20:1464150..14642391622815907.7571013-CDS-P-fluviatile_contig20:1464150..1464239Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1464151..1464239 -
1693563690.7751508-CDS-P-fluviatile_contig20:1464150..14642391693563690.7751508-CDS-P-fluviatile_contig20:1464150..1464239Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1464151..1464239 -
1622815907.768728-CDS-P-fluviatile_contig20:1465021..14652531622815907.768728-CDS-P-fluviatile_contig20:1465021..1465253Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1465022..1465253 -
1693563690.7955751-CDS-P-fluviatile_contig20:1465021..14652531693563690.7955751-CDS-P-fluviatile_contig20:1465021..1465253Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1465022..1465253 -
1622815907.7818227-CDS-P-fluviatile_contig20:1465718..14658001622815907.7818227-CDS-P-fluviatile_contig20:1465718..1465800Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1465719..1465800 -
1693563690.8218613-CDS-P-fluviatile_contig20:1465718..14658001693563690.8218613-CDS-P-fluviatile_contig20:1465718..1465800Porterinema fluviatile SAG_2381CDSP-fluviatile_contig20 1465719..1465800 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig20.4346.1prot_P-fluviatile_contig20.4346.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig20 1454710..1465800 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig20.4346.1

>prot_P-fluviatile_contig20.4346.1 ID=prot_P-fluviatile_contig20.4346.1|Name=mRNA_P-fluviatile_contig20.4346.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=609bp
MACSVFGQAVLILVAITCKGQAFLLVPAFRAATSSRPDVARARQQQPLRA
SAAASSPVAPASESPGVVTDEFMLGGPGRATEVVVVGAGVGGLATAARLA
KAGCRVTVVEKNCEEDIGGRLNELVMEGGFRFDTGPSLLLLPETYRETFA
DLGRDLDDFFEMRRVSPTYKVYFDDGDSVDLSDDEADIQRQMNRLEDGGF
DKYKAYMGVAQLNLEVGLPNFIEQKFAPGRLPEFALSALFNSPLENHHAQ
LSRRFESPKMRALLSFQDLYVGLSPYNAPAVFSLLQAIELRDGVYYPMGG
FARVAEALGAVCKDLGVKFRFDCPVSEVSVVGDRGRVNCKGVVLESGEVL
EADAVVCNADLPYAEKNLLPESVSRSFEHWEYSSSVIAFYWCSGRRWPQL
SHHTVFLSTDWEGSWNSAFGKLPGGELGDRFNFYAAAPVRTDASVCPEGS
DAIMVLVPCPSIPDDYETLENNEDDIRGERGDEGGSDGRGDRGATARGDW
VRRAREGVIREMEVSAGMEGFGDSIVGEEVYAPWDWRDRYNLRRGAVFGL
SHGLNQVSLLRPGPQHPTVNGLWFCGASSRPGNGVPLVLIGAKQAAENVL
TVIAGGNT*
back to top

mRNA from alignment at P-fluviatile_contig20:1453616..1465877-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig20.4346.1 ID=mRNA_P-fluviatile_contig20.4346.1|Name=mRNA_P-fluviatile_contig20.4346.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=12262bp|location=Sequence derived from alignment at P-fluviatile_contig20:1453616..1465877- (Porterinema fluviatile SAG_2381)
CTCTCTCTCTCGCTCCCTCTCTCTCTCGAGCTCACGATCGTGGTGCACAC
GACGGCGCGCTAGATCATTCAAACGAAATGGCATGCTCTGTATTTGGGCA
GGCTGTGCTCATCCTGGTTGCTATAACTTGCAAAGGTCAAGCCTTCTTGC
TGGTGCCTGGTGAGAGCCGCTACTATTGTACCCTCCCTGATACAGTCATT
GCACAAGCCTCGACCATGCGCGCTCCGCGGCAAACAGCGGCGTACGTCTG
CATCAAAATTGTATATGGTGTGACTGATGGTAGGTGCTTAGGGTAGCTTT
TGCTGCCAAGCGAATGCCGCTTGTTCCTTAGGAGAGCTTTTGATCGAATG
TGGAAAACATGTGCGGAGGGGAAGGGGGTTCGATAGCCCCGTCACCACAG
GTGGTTTGGCCGCGGAGTACGTGATCCCAGGTCCATTGATCAATGCTGAA
GTGCTGCATGATACCCATTCCATGCGCCCGTTCTTCTCATTGCCGCAGTT
GTAGTACGGCAAACTCACAGGACAAGCATATGACAACATCCAATCATTAT
TTCCCTTTGTCCGCGCCCCTGCCGCGCGTCCCGCCTCCCGTACCCGCCCC
CGTCCCGTCCCCCCTTTCGAGCAGCCTTCCGTGCGGCGACCTCGAGCAGG
CCCGATGTAGCCAGGGCGCGGCAGCAGCAGCCGCTGCGAGCTTCGGCAGC
AGCATCATCACCAGTGGCGCCAGCCTCGGAGTCGCCGGGAGTGGTGACGG
ATGAGTTCATGTTGGGAGGACCGGGGCGGGCCACCGAGGTTGTTGTTGTC
GGGGCGGGAGTGGGGGGGCTCGCGACGGCCGCCCGTCTGGCCAAGGCCGG
CTGCCGGTGCGTTGGATCGTCTTGGCTTTGCTGATATCTGAAGCGGTACA
CAGTAAACTCGCTGGCTTCTGTTCGGGCGGGTTTCGCTCGTGGTGGTTGT
GCTGCAGAAATCCTTGGTTGGTCTTGGCGGACGCGGCGGACAGAATGTGT
AGACTATAATAGGCAGGTGATTCATTGTTGACGTCCAAGTCGTCAGCGAA
AGTGATCCCAGCAGTGGTGTTGCTGATTCGTGCCAGTGCTATTGCGTTGG
CGTTGTTGCCGCAATTGTTGCTGTTCTTGTTGTCTTTGCCTGCAGCGGTG
GTGGTGATGGCCCCTGTGGTGTGTAATGTGACGTTTGCCGCTCCAAGCGA
GCTGTTCGCATGTGTCCGCGGCAAATGGCCGGCCCAACGATATATATTGC
CCATATTGGTGTACATCCCTGGAGCACCTTGAATCGGCAAAGGCGTCCAC
TCACCAAGCGTGTTCTGCAGCTTAGTGCAATGTTGAACTCCCGTGGCCTT
CAGCACACCAGTTCAAGGAGAATTGGATGTTGGTTGCCGGTTGTTTTTGT
TCGCTTTCCTTTTCCCCTTGCTTAAGTTAGTGGTGATATGATTGGGCGAC
AAATTTGCCGTCGCTTGCCGGGAAGAAAAAACCGCGCCTAGTGTGCCAAC
TGCTGGCGCTGACCTGACACTGACGGATGCCCTCCCATGCGCGGGCCGAC
CCCTCGGTTCGTGACCAATGGCCGGAAGATCATCACGATGCGACACCACG
AATGACCCCTGCGCTCTTTGCCCCGACAAAACACGCAGGGTGACGGTGGT
GGAGAAAAACTGCGAGGAAGACATCGGTGGCCGCCTCAACGAGCTCGTGA
TGGAGGGCGGTTTCCGCTTTGACACAGGTGTGGTATGACACGGGTGTAGG
TGTAGGCATCGCTTCAACCCAACAGATTCGTCTCCTCACACAAGCTCGTT
GAGGCGGCAGGCGGAGCTCTGTGAGACCACCACTCTGTCAGTGCTGTTTC
TGCCCGTTGCTATTGAAGAGTTCCGGTGCTTACGGTGGGGACAGGAGCTA
TCCGCGGTACGTCGTAGTTGTAAACTTCCCCAAATTTGGTGGCGATGCGG
CTGTCGACGTGGGTGAGTGGGCTGTGTCTTGTCGACCACTTTACTGTGCC
GGCGTGATGCGATCTCATCTGCATGGCTTTGTGCTTGTTATTTTGTTAAG
TTGCCCCGAAAGCCTGGAAGGTGCGTGTGCCAAGAAGCTCCAAGAAAATC
TTGCACAAAACTCATTTCGTTGGAGGACATATTCTGTAACGGCTGGCGTG
AGGAATGTGAAGACGACGAGCTTCCGCAGGCGAGTAAGAGGCATCTATAT
CAACGAGCGGTTATCGAGGACATACCCCGTGATAGTCGCTACGATCAACA
CCAAGCTGCGGCGGGCATTCGAGAGTTGCTATTGAATCAAGAAGTTTGTG
TTTTAGCATCCAACGCATTCGTGCACCAGCTGCGAGACGTGCACCCGCCG
GCCAACATCACCCGTAGGCGCAAGCAAGAGCTGATGTTGTTGCCTTTCAA
TCACTTCGGCGGTACTTCGGTGCTTGCTGACGCACAGGACCAAGCCTTCT
GCTCCTGCCAGAGACGTACCGGGAGACCTTCGCAGGTAGGCACGTAGCGG
CCCCTTTCTCTCCCACGGAGAAGGAGGTTGTGCGCACATTATGGTCTTAC
CGTCCCGCTTTTTCTCATTCCCGTTCTTCGCCAGCGTACTTTTCTCTCCT
TCATCGTATCGACACAAGCCTCATGAGTTCTGCTTGTGTTTCGCTTAGCC
GGACCTCAGAGACGACTGCCTGCTGGAGCAACGACCAGCAGCAAGCACGC
GCTCACGTGTTTGTGTGGGTCTGCGTGTCTGTGCGTTTGGGCTGGCATGT
TGCCGGCTCCGTTTGCGCTAGAGTCCAGGTAGACTGCTCTCGCTAGCGTT
GAAAGCGAGAATGAGGGATCGTTGTCCATCAGCAGTGAGATACTATTTCC
TTCAGCCCATTGCTGAAGAACGAGCACGGGGGGAAGTTTTCGGGCAAAAA
ATCACCCTGGATCGCTTGATGAACTACATGCAGTCCTGGCGAACTTTCTT
CAGCTTTTCAGGCTTTTTCTTCTTGGTCGAAATTTTATTTGTCAAATCTT
TTTCACTACCCCTCTCTAGCCCACGAATTTCTGTCCAGGGACCTCGTGGC
TGTGTGGGCGCTTCTTTCTGGTTTTTCTTTTCAAGGCCGTTCATCTGGGC
CCGAACGGCTCTGTCACGGCCTCTCCTGTTGTTGACCTGTTTTTGATACC
CTCCACGTCTTGTGTACGCTCTTGGCAACAAACCGCGTTTGGATGTTACG
TCGGGGGCGACAATGCTGCTGCTGCTACTGCTACTACTTCTGCTACCCAT
GCCGCCGCTGATGGTGGCGGCGGTGATGAGATAGACCTCGGCCGGGACTT
GGACGATTTTTTTGAGATGCGAAGGGTATCGCCCACGTATAAGGTGTGTC
GTTGCTGTTCTCGGCATCGTCGTCGTCGTCAATGGCAAATACGGCAGCAG
CTTCTCGTGCGTTGTGTGCACCGCTTTTTCTGGTGAAAGCGGCGAAGGTG
GTAGTCGCCGGCGGACTCGACTTGTGCACCTCTCATTTCTTCGGTTTCTA
ATCGTTTCCTCGCCCGCTTCGTCCTTGCGAGACTGTGCCATGCAGTTGGA
TGATGCACAATTCACAGCAAAACCACACATACAGACCACGACGTGTTCCA
TCTCCTACCCCCTCGCCATTGTCATGTTCCTTCTTTCACCCCTCTCAGCT
CTCTCTCCTTCTCTCTCCCTCTCTCTCCCTCTCCCTCACCTGCTTTCTCG
CGCGTTCGCCATGAACCATTTTTTTTTTTTGCACTTCCTGCAATTGATGA
TGTGATTTCTGCCATTGATTATGTGCAATTGATTATGCTGTTGATTATGT
GCAATTGATTATGCAAATTTGTTTTTGCACTTCCTGCAATTGATTATGTG
ATTTCTGCCGTTGTGAGGTATATGCGATCTGCTCTTGTTGACGAAGCCGG
GATTAACTGCAGCCAACGGAACTATCCTTTAAAGCGCCCTGGTCTCTCGC
ACCGCCCCCAGTTAGCTCGGCTTATGTTTATCACTCTCTTGCACCCGCGT
TTGGATTGGACCGCTTTTTCCTCACGCCCCCGTCCCAGGTATACTTTGAC
GATGGCGACTCGGTGGACCTCAGCGACGACGAAGCAGACATCCAGCGACA
GATGAATCGTCTCGAAGACGGAGGCTTCGACAAGTACAAGGCCTACATGG
GCGTCGCGCAGCTGAACCTTGAGGTCCGCACTGGTGGAGAGGGGAAGTCA
AAATGCAAAATGTCGCAGGTTGAACGGATGGGCAATTGAACAACACGAAC
GAAAATGAAATGCTGCATTGTGTCCCTTCTGATTTCACCTTTTTTTGTGG
GGCATGATGGGCATTCGACAACATAAAAGTTTCTTACTCGCCTTCCGCTC
TTTGGTTCAATTATGAGTCATGAGGACAAGTTTGAGCTCGATCTACGGAT
TCCGTCGTGATGTCGACAATCGCCGTAAACACAGAGAAAGGCTGGCTGTC
GGCGCACCGACGAGTCGGTCCTTTTTTCGAAACTCCATTAGGCGACGTAT
GACCGGCAATCCTGTTCTGTTCATTTCACCACTGCTTACCGATTTGGCAA
TCATGAAGCCTTGGTCGACGTCGCGCACCCTTGTCTGGATGTTGGCGTTT
AGTAACCTCTTGGAGACCGAATCTGCGAAGCCGGCCACGACGCATGTGTA
CCTTTCACTGTTATAATACCAGTCCCTCAAGTGTCAAAAAACATACCATT
CCCCCCAAAAATGTCTGATATATCGAATATCTAGTCGCAGGTCATAGGCG
TAAGCTACATTCGCGATACCATCTCGAACCAATAGCAATGCACCGAGAAC
TGGTCATTGGACGGGACTGAGAGCAGGGAGATGTCCGTGAAGTGTACTCG
TGTTTCAACCTCAGCGGCAGGCCGGGCCGAAAGTCTTCGTCCTACGGAGA
ACCTTGGTGTCTGGTCCTCACACGACCGAAGCCGCTAGAAGCTCTCATCG
GCGCCATCTCTTTCACATCCGGCGAAGAGTGGATTGCCTTCTTGATTCTT
CCGCCGCCGATCTCGCTCAATCTGGCTTCTGAGAGGCAGTTGTCACCTTT
GCAGCGCGGGTCTGCTCGTGGTTTGTGTTGGAATGGCTGGTTGTCACGAT
ATCGCAAACGTGTCAACGGGTGGTGGTTCGCAATCGTCCTCCTAAATGAA
AGCCCGTGAATGACACACGCAAACTTGGAGCGATCTGGAAATGCATCATT
TATTATTCCCATTATGCCAAGTTTCGCTGGCACGTACGATTTCACGACGG
CTAACGTTGAAATACAGTGTAGCGCTTCGCACAACCAACAGGTGGACATG
TCCAACAGAATTGTCCAACAGAGTTGCTGCGATCTCCTTCGAGTTCATCT
CCCCCCGCCCCTTGCCACCTTTGGCGCTTCAACACAGATAGTATTCCATG
TATCGGGAGGATAAATCGGGGTCGGATAATGTGCAAAAGACCGCGCCGTA
GGAGAGAGTTGGTGTGAGCTTCTCCCACAGGAATTTCACTCCAACGAGTC
ACCTTATTCCTCCTGCTTCTCGAGGTGGCGACGCGTCTTTTTTTCGTATG
CTTCGCCGCCAGCGCCACAAGCAACCGGTTCTTCATGTGATTGGCGCCCG
GCTGTCGTGCTACAACAAAACCGGAAGCGTAAAGTAGAGATCGGTTCAAT
GAGGTCCGATGTAAATTCAACAGTGTACACTCCACCCCCCCGCGCGCGCG
GTCATGCGCCTCCTTGCCCCTGCAGTCAGTCCCCTTCGACCGTTTTCTGT
TGCTCCGCCCCCAGGTAGGGCTGCCAAACTTTATCGAGCAGAAGTTTGCC
CCCGGGCGACTGCCGGAATTCGCCCTGAGCGCGCTGTTCAACTCGCCGCT
GGAGAACCATCACGCGCAGCTGAGCCGGCGTTTCGAGAGCCCTAAGATGA
GGGCGCTCCTTAGCTTCCAGGATCTCTACGTTGGTGCGCTTTGCGTGAAG
ATGGCAAGCGGTTGTCGTGTCAGGGAAGAGAGGTCTGCCAAGGGTGGCGG
GACTGGGATGCCCAGGGGGGTCTCCAGGGTCAATTTGCGAATTTGAAGTG
TTCCAAGTTTCCCCAAGAGGTGACGTCATGACCTTTGATGTCATCACCGG
TCGACCATGGGATTTTCTGCACACAGGAAATTTCCTTTAAAAAAATTGAC
CAATCAGAGAACTGCGGGCACCTTTTCTCTCCCTATCCGTTGCTGTACTT
GGCATTATTTTCATGGATAAGTTGCTCTGAGCTGTGATCGAGCGTGAACT
CTTCCCACATGCTACTCTCGAAGGTTATAGACAGAGCACGAAAGAGGGGG
GGGGAGTGGGCGGTTCGCGTGGTTTTAGTTCTTGGTTGCTAGAAACGCAC
GGCACTCCCACGCTGTGATGAGTTGAGGGCTGCAAAAATCACGGTGTCTT
GTTACGCATGCCAACACCTTTGATGTGTGGGTTTTTGCGCACGGGATCCA
ATTAGACTTCATCGACCGGCGCTGTCCTAAAGTCTTTCACTTATCGCATT
GCACGAGCTGAATGACCAGGGGTTATGATTCCCGAAAATGGAAGACCGCT
CGCCAAGAGCGCTTGCGTTGCGCGTGTCCGGCATCGCGTTCGTTTGACGT
AGGCATGCGATTTCAAACCTGCGTAGGTATAGCCCGCGGGCTTCACTGTT
TCGCTTTCGCCCTGTGGAGGTCAGCTTCCTAAATCTCTGTAGATTTCGAT
CTCGGCTTTCTTAGCTATTTCACGTTTGCCTCACCCTCGCCAAGACCCAG
TACTTTTCCCCTGATGCCGTCACCCTCGTTAACAAATGCTCAGGTCTGTC
GCCGTACAACGCCCCAGCAGTCTTCTCGCTGCTGCAGGTGAGCAAAACTA
GGGACCCACACTGAGTCTAAGGACGCCAATCGTGCTCACTCCGAACCAGC
GTACTCCTGCAGCCACCTTGCATCAGGGAAACAATGACACGTGCTCTGTT
GTGTGTTGCATCTGATTCCCACACGCTCCTCCGTTTTCAGAGGTGGCTCG
GGACCCAATGTACCGTTTATACTTGGCGAGTTCGTAAAAGACGATTGCAC
GTCGAGGTTGCGTGTACTTTGATTTGGTAATCATTTCCGGGTGAGCTGTT
TCTTTGTGATGTTTCACTCGGCAAGATGTGCGAAGCCCACCGTGGGTGTG
AAAGGAAACGTGGAATATCACTGCGCCCGATACGAGCATGAAAAAGGAGC
TTGTGAAGCTTGTCCAACAAGGGGGGCACTTCAAAGCAAGCAGTGATGCC
TATGTCCGCCTCAGTAGCCATCATCTGGTTGATTTCCCGATGTTCTAGTA
GGACAGATATCAAAGTGCGAACTAAGCAACAGTTTTCCTGAGTGCGCCGC
CCCGCTTGTACGGCTACTTCACGGTTTGCTTCTCCGGCGCACGAATTTGA
CGATGCTGCACAAGTATCGCTGTGTTTGTTTCCGTTTCCGTTCGCATCTA
ACTGTACCCACATACGGCCAAACGTTTTCCCCCCCCAAGTCTCGAATTTC
GTATCTTTCACGCCGTCAGTTCGAATAGACCCACCTGAAGGCTGAACGCG
TCTGTCCTGTAAGGGTGCGACCCCGTTCCCTATTCTCTTGCCTACCCGCT
TGCTCACTTGCTGCTCCCTACTTTTTCGGTTCCGCGTCCACTTGCACGGT
GTAAATCACGCGCTACGCAGGCGATCGAGCTCAGGGATGGGGTCTACTAC
CCAATGGGCGGCTTCGCAAGGGTGGCGGAGGCGCTGGGTGCGGTTTGCAA
GGATCTGGGTGTCAAGTTTCGCTTCGACTGCCCCGTGTCAGAGGTACGCC
GTACTTTGCTTTGCGATTGCAACGTGAAGGTTTCATAATACGCTTGGGCC
GTCCGGCGGGCAGGAAACAAGGCGTATGAAAGTGGTGGGGTGGCCGTGCA
TTTTTGCACCAGTCCGTAGGTCACTTTTCACGGCCGACTGCGCTGTGTGT
TCACTCCGTCATTTAGTAGGCTATCCGATTGACGAACCGTCGTGCTCAGA
TTGATTTGCCTTTGATCAATTCTTGAAGGTGAAGAGTGGCAGACTCTCGT
GCGCACGACTCGTGGCGGCCTTGAGCATGATATGAAAGAGTCCATCAATC
GCTAGAGAGTTCTTTTTTTCGTGTATGCATCGGAGCAATGTTTCTTCGCT
GGCTGGATTATTGATGGTTGAGTCGCTGCTTCAAACAGATAGTCAATGTC
CACCGAAAAGATTATCCTCCGGCGTGACCCTGGTGGACGCCATGACGTCA
AGATTTCCCAAACCGCGCTAGAGGTGATTGCCGACTTTCAGGCGCGTTGC
AGTGATCGCTCTTGTTCTTCAGACGAGGGCTTGGTCGTGCTGAAACCAAA
AGTCCGCGCTCGGAAGGAGGTCGCGCCGCTCTTTAGAATGCACCCCATTT
ATTTCGCTTGCTTTATTTTTTATTGCGGACGATCCTCGTGGGCCTGTTCC
GGAAGATTGAAAACATCGAGGATCACCACCAATCACCAAATCGCCTTCAA
AACACATGACAGGTGTCTGTGGTAGGAGATCGCGGCAGGGTCAACTGCAA
GGGTGTGGTCCTCGAGTCCGGAGAGGTTCTCGAGGCCGACGCGGTCGTGT
GTAATGCCGACCTACCCTACGCCGAGAAGAACCTACTGCCGGAGAGCGTG
TCCCGCTCTTTCGAGGTAAAAGAGTGCGACGTTGTAGGAGATAGGCGGAG
GAAGTGAAGCCTCTGGAGTCGGGCATGCAGGCCAGCAGGAAGGCACGTGG
CGGAGCAGGGCGGCGTTCGACCTGATAGTTTGCGGCCAGGGTGTCTTGTT
TAGGCGCCCCAAAAGGTGGGGCTTTCATGTCGGTCCTTCGTTCCACCTGC
CTACCCGGCTGCCAGTGGGAGAGTCTCGCCTCAGCAACGTCACACTTCCC
CAACCAACGAATCCCGTTCCCCTTTCCGCCGCGTGCTGAATTTTCGGTGC
GGCTGCCGCACGCTTATCCCAATAAATCGACGCGATAACTCCATGTCGCA
ATAGCACTGGGAGTACTCTTCCAGCGTGATCGCCTTCTACTGGTGCAGCG
GCCGGAGGTGGCCGCAGCTCTCGCACCACACTGTCTTCCTGTCCACGGAC
TGGGAGGGGAGCTGGAACTCTGCCTTTGGGAAGCTTCCAGGGGGCGAGCT
GGGCGACAGGTGAGCCAAGTCGGCCGTGAGCTTGGTTGGCGTCGCTGGCG
CAATCCCATCAGTGCCGCTGCTGTTGCGGCGATTGTGCTCCTCTGCGCTG
CTGTCGTCGCTGATGGCCTTTTCGAGCAAAGGTGTTTCCTCGAAGGACGT
GCTTCCTCGAAGTAGCCGGAAGCTTATCGCAGCTTTTTTTCTCGCAGATA
TCGACGGCCACGTGGTCTTCGACGTGCACTAGATCCTGTGCAACTTCATC
CCTTCGGCTAGTGAGCCCTCGCACCCAAATGCCTGGGTCAAGAGTTATTT
CACTCCTCACCCGATTCTCGGGCAATGTCTCACGGTGCAATCCTCCTGTA
GCGTTCGAAGCCTGTTACGAAGGCGGGGCGGCGTCGCAAGGCGGCTTTGC
CCCCCCCTTGCAGCCCCGCTTTCCCAACCTTACTTCGCGTTTGCCGCGCA
GCCAGTGCCCACCCGCCACAACAACACAGAAATTGAAGCATCGCCGGGGG
TTCCGGCGTTGTATAAGAATCCCACACATCAACCACACCCTGTTGGGAGA
ACACGCCGTGCGGCGATCGGCTCAACCCTCCTGCCTCAGACCGCCAGCGA
CCGGGCTTCAATTGAACTGTGCGCTCTCCGCTCGGCGAGCGCTCGTGGTC
GGAATGAAAAGATCCTTGGGGAGAATATGAGTGCGTCCCTACCTCTGACT
CCCCACCTTCTCCACATACGCGGATTCCCTCCGACACCGACTCTTGTGGG
CCGAAACGACACTGGGAAGATTCAATTTCTACGCGGCGGCACCGGTGCGG
ACGGACGCCTCGGTCTGCCCGGAAGGTAGCGACGCGATCATGGTGCTTGT
GCCGTGCCCGAGCATCCCGGATGACTACGAAACACTCGAGAATAACGAGG
ATGACATCAGAGGCGAAAGGGGCGACGAGGGCGGGAGCGACGGCAGGGGA
GACAGAGGAGCGACGGCCAGGGGAGACTGGGTAAGAAGGGCGAGAGAGGG
CGTCATCAGGGAGATGGAGGTGTCTGCGGGGATGGAGGGATTCGGTGACA
GCATCGTCGGGGAGGAAGTCTACGCACCCTGGGACTGGAGAGATCGGTAG
GTCGTTGGTGTTTACTAGAATGGTCTCGGTTTGCGGGAAGGGCTTACTCT
CAAGATGTTCCAAGGGCGGGAGGTCGATTTCTTGAGCGGATTGGTAGCGA
CGCGGAAGCGGAGGATGTTGCAGACGACGAGCGGGGCACAACACATTCTC
AACTCCACGGAAGGCTGTCAAGACATAAAACGGCGATCGAAACGGCAACC
GCATTTGCTGTAGTACAGTGCGGCGGGCCCGTGACGTGCGGGGAAAATCT
GCTGAATAGCATCGCAGGTGTAAAGTATCCTTTATTACTATTAATACTAC
TTTCTGTGTACGATTCTTCTACTGATGGTGAGAGCGCTATCCCCAAGATG
GCTGTCGTGGTCTCCACGACGCATTCGCCAAACTCCTTGGAGACGTTCCA
GAGGCATGCTGCGGTATCGACCCCTACCGCACGGGTTTCTACATGCAAAT
GCTCATTTTTCGTGCCCGTCGCAGTGTTTCACCAACGCGGCCTCTTTTCG
ACCCTCATGCCGTATGATTGCGAAGAGTTTTTTCCTTTGAGTGCACGCAA
AGCAAGCCCCTACTCCCTTTTTTGGATTAAAGGGGTTGATCCTGATGCGG
TAAATGTTGAATCAACCCCCCACCCTGTTCTCCGATCCTTCGAACCCCGT
GCATCCTTCGCCCCCCGGCGTTCCATCTACATGCTAAACAAAACCACCGC
CTTAAAGCTACAACCTGCGGAGAGGCGCCGTGTTCGGGCTATCCCACGGC
CTCAATCAGGTCTCGCTGCTCCGGCCCGGCCCCCAGCACCCTACGGTGAA
CGGACTGTGGTTCTGCGGGGCGTCCAGCCGGCCGGGAAACGGGGTGCCGC
TTGTGCTTATTGGTGCGAAGCAGGCCGCTGAAAACGTGCTCACGGTCATC
GCTGGGGGGAACACCTGACTGCTGGACTTCTGGTGCTATTTGCCGGATGC
GAAGGGGTGGAGACCATTTGGCGGGGGGAGAGAGGATTGGCGCCCGGTGA
CGCCTTGTGAGGTTGTAAAATGGTAGACGAGGGACGATATTTGAGCCACT
TCTCTGGGGGTCGTGGGGGGGGTTTCGTAAGTATGAAAGAAAAGTCGTGG
AGTTTCACGTCGTGTTTGGTGGAACGCACCACACGAGCGTGTGGGTACCT
TTTTTCTGTTCCTTGTTCATTTCCGCGAGTGAAGAACTTGCAAATCGTAC
GCATCCTTGGGTTCGCTTTACCCAGCTCGTCCACTGGTTGCTTGTCGAGG
GTGCGGGGTAGAGCGAAGGAGGATAAGTTCCTTGAAGAGCTATAAGTTCG
TGGTGAATAGAGTATCTTGGAGAGAAGTTTGCTATGCTGCGGCTAATAGT
CAGCCCCACGCTTGTTTCTCTGTTTTGTAGTGGATTTCGGCCTCCGCATC
ATGTCACCCCTCTCCTTCCAGGTTTTTTTGTGGACGAAAACGGCTGCACG
TACACACCTTGACTCTTCTTGAAGTCATTCATGGCGATTGGTGGGGCATG
CCAGGAGGTCAAGGTCGTATAGAATGTGGCCGAAAGTACGCATGCATGCT
CCAATTTTTGCGAGTGCCGCGTGAGGAATTCAAAAGTTGTGGTTGCTATT
ATAAAAACAACTCGTGAGCCCATCCTCCAAACCTGCAGCACTCGATGGAG
GAACGCACGTTGCAGTAACGGCGGCTGGCGCTCAGTGTCATTGGTTGAAT
TAGAGCAAATGTTGTACGAAAATTGCCGCGAGTATCAATTTCGTACTCTG
AAGATTTAGTGCCATATTCCCCCGCTGTTGGTTTTAGAATCTAGCAAAAT
CTCAGACTATGCAGGACAGCCTTGTAACCTCGTGAATTCCGCATCTTTTA
GAACACTTAAAACAGGAGGATTCGTCGGAAAATCCGCAAATAATCTAGTC
TACTAGTCACATCCCGATTTGATATAAAGAGCTCTCAGATGTCTGTTGTC
ATTCGGACGGCCCTTGCTCTATCATTAATCAATATCATATCGCAAGGCAG
TTTAAGAAATAC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig20:1453616..1465877-

>mRNA_P-fluviatile_contig20.4346.1 ID=mRNA_P-fluviatile_contig20.4346.1|Name=mRNA_P-fluviatile_contig20.4346.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3654bp|location=Sequence derived from alignment at P-fluviatile_contig20:1453616..1465877- (Porterinema fluviatile SAG_2381)
ATGGCATGCTCTGTATTTGGGCAGGCTGTGCTCATCCTGGTTGCTATAAC
TTGCAAAGGTCAAGCCTTCTTGCTGGTGCCTGATGGCATGCTCTGTATTT
GGGCAGGCTGTGCTCATCCTGGTTGCTATAACTTGCAAAGGTCAAGCCTT
CTTGCTGGTGCCTGCCTTCCGTGCGGCGACCTCGAGCAGGCCCGATGTAG
CCAGGGCGCGGCAGCAGCAGCCGCTGCGAGCTTCGGCAGCAGCATCATCA
CCAGTGGCGCCAGCCTCGGAGTCGCCGGGAGTGGTGACGGATGAGTTCAT
GTTGGGAGGACCGGGGCGGGCCACCGAGGTTGTTGTTGTCGGGGCGGGAG
TGGGGGGGCTCGCGACGGCCGCCCGTCTGGCCAAGGCCGGCTGCCGCCTT
CCGTGCGGCGACCTCGAGCAGGCCCGATGTAGCCAGGGCGCGGCAGCAGC
AGCCGCTGCGAGCTTCGGCAGCAGCATCATCACCAGTGGCGCCAGCCTCG
GAGTCGCCGGGAGTGGTGACGGATGAGTTCATGTTGGGAGGACCGGGGCG
GGCCACCGAGGTTGTTGTTGTCGGGGCGGGAGTGGGGGGGCTCGCGACGG
CCGCCCGTCTGGCCAAGGCCGGCTGCCGGGTGACGGTGGTGGAGAAAAAC
TGCGAGGAAGACATCGGTGGCCGCCTCAACGAGCTCGTGATGGAGGGCGG
TTTCCGCTTTGACACAGGGTGACGGTGGTGGAGAAAAACTGCGAGGAAGA
CATCGGTGGCCGCCTCAACGAGCTCGTGATGGAGGGCGGTTTCCGCTTTG
ACACAGGACCAAGCCTTCTGCTCCTGCCAGAGACGTACCGGGAGACCTTC
GCAGGACCAAGCCTTCTGCTCCTGCCAGAGACGTACCGGGAGACCTTCGC
AGACCTCGGCCGGGACTTGGACGATTTTTTTGAGATGCGAAGGGTATCGC
CCACGTATAAGACCTCGGCCGGGACTTGGACGATTTTTTTGAGATGCGAA
GGGTATCGCCCACGTATAAGGTATACTTTGACGATGGCGACTCGGTGGAC
CTCAGCGACGACGAAGCAGACATCCAGCGACAGATGAATCGTCTCGAAGA
CGGAGGCTTCGACAAGTACAAGGCCTACATGGGCGTCGCGCAGCTGAACC
TTGAGGTATACTTTGACGATGGCGACTCGGTGGACCTCAGCGACGACGAA
GCAGACATCCAGCGACAGATGAATCGTCTCGAAGACGGAGGCTTCGACAA
GTACAAGGCCTACATGGGCGTCGCGCAGCTGAACCTTGAGGTAGGGCTGC
CAAACTTTATCGAGCAGAAGTTTGCCCCCGGGCGACTGCCGGAATTCGCC
CTGAGCGCGCTGTTCAACTCGCCGCTGGAGAACCATCACGCGCAGCTGAG
CCGGCGTTTCGAGAGCCCTAAGATGAGGGCGCTCCTTAGCTTCCAGGATC
TCTACGTTGGTAGGGCTGCCAAACTTTATCGAGCAGAAGTTTGCCCCCGG
GCGACTGCCGGAATTCGCCCTGAGCGCGCTGTTCAACTCGCCGCTGGAGA
ACCATCACGCGCAGCTGAGCCGGCGTTTCGAGAGCCCTAAGATGAGGGCG
CTCCTTAGCTTCCAGGATCTCTACGTTGGTCTGTCGCCGTACAACGCCCC
AGCAGTCTTCTCGCTGCTGCAGGTCTGTCGCCGTACAACGCCCCAGCAGT
CTTCTCGCTGCTGCAGGCGATCGAGCTCAGGGATGGGGTCTACTACCCAA
TGGGCGGCTTCGCAAGGGTGGCGGAGGCGCTGGGTGCGGTTTGCAAGGAT
CTGGGTGTCAAGTTTCGCTTCGACTGCCCCGTGTCAGAGGCGATCGAGCT
CAGGGATGGGGTCTACTACCCAATGGGCGGCTTCGCAAGGGTGGCGGAGG
CGCTGGGTGCGGTTTGCAAGGATCTGGGTGTCAAGTTTCGCTTCGACTGC
CCCGTGTCAGAGGTGTCTGTGGTAGGAGATCGCGGCAGGGTCAACTGCAA
GGGTGTGGTCCTCGAGTCCGGAGAGGTTCTCGAGGCCGACGCGGTCGTGT
GTAATGCCGACCTACCCTACGCCGAGAAGAACCTACTGCCGGAGAGCGTG
TCCCGCTCTTTCGAGGTGTCTGTGGTAGGAGATCGCGGCAGGGTCAACTG
CAAGGGTGTGGTCCTCGAGTCCGGAGAGGTTCTCGAGGCCGACGCGGTCG
TGTGTAATGCCGACCTACCCTACGCCGAGAAGAACCTACTGCCGGAGAGC
GTGTCCCGCTCTTTCGAGCACTGGGAGTACTCTTCCAGCGTGATCGCCTT
CTACTGGTGCAGCGGCCGGAGGTGGCCGCAGCTCTCGCACCACACTGTCT
TCCTGTCCACGGACTGGGAGGGGAGCTGGAACTCTGCCTTTGGGAAGCTT
CCAGGGGGCGAGCTGGGCGACAGCACTGGGAGTACTCTTCCAGCGTGATC
GCCTTCTACTGGTGCAGCGGCCGGAGGTGGCCGCAGCTCTCGCACCACAC
TGTCTTCCTGTCCACGGACTGGGAGGGGAGCTGGAACTCTGCCTTTGGGA
AGCTTCCAGGGGGCGAGCTGGGCGACAGATTCAATTTCTACGCGGCGGCA
CCGGTGCGGACGGACGCCTCGGTCTGCCCGGAAGGTAGCGACGCGATCAT
GGTGCTTGTGCCGTGCCCGAGCATCCCGGATGACTACGAAACACTCGAGA
ATAACGAGGATGACATCAGAGGCGAAAGGGGCGACGAGGGCGGGAGCGAC
GGCAGGGGAGACAGAGGAGCGACGGCCAGGGGAGACTGGGTAAGAAGGGC
GAGAGAGGGCGTCATCAGGGAGATGGAGGTGTCTGCGGGGATGGAGGGAT
TCGGTGACAGCATCGTCGGGGAGGAAGTCTACGCACCCTGGGACTGGAGA
GATCGATTCAATTTCTACGCGGCGGCACCGGTGCGGACGGACGCCTCGGT
CTGCCCGGAAGGTAGCGACGCGATCATGGTGCTTGTGCCGTGCCCGAGCA
TCCCGGATGACTACGAAACACTCGAGAATAACGAGGATGACATCAGAGGC
GAAAGGGGCGACGAGGGCGGGAGCGACGGCAGGGGAGACAGAGGAGCGAC
GGCCAGGGGAGACTGGGTAAGAAGGGCGAGAGAGGGCGTCATCAGGGAGA
TGGAGGTGTCTGCGGGGATGGAGGGATTCGGTGACAGCATCGTCGGGGAG
GAAGTCTACGCACCCTGGGACTGGAGAGATCGCTACAACCTGCGGAGAGG
CGCCGTGTTCGGGCTATCCCACGGCCTCAATCAGGTCTCGCTGCTCCGGC
CCGGCCCCCAGCACCCTACGGTGAACGGACTGTGGTTCTGCGGGGCGTCC
AGCCGGCCGGGAAACGGGGTGCCGCTTGTGCTTATTGGTGCGAAGCAGGC
CGCTGAAAACGTGCTCACGGTCATCGCTGGGGGGAACACCTGACTACAAC
CTGCGGAGAGGCGCCGTGTTCGGGCTATCCCACGGCCTCAATCAGGTCTC
GCTGCTCCGGCCCGGCCCCCAGCACCCTACGGTGAACGGACTGTGGTTCT
GCGGGGCGTCCAGCCGGCCGGGAAACGGGGTGCCGCTTGTGCTTATTGGT
GCGAAGCAGGCCGCTGAAAACGTGCTCACGGTCATCGCTGGGGGGAACAC
CTGA
back to top