mRNA_P-fluviatile_contig20.4290.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig20.4290.1 vs. uniprot
Match: D7G5D4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D4_ECTSI) HSP 1 Score: 111 bits (277), Expect = 2.460e-24 Identity = 70/172 (40.70%), Postives = 99/172 (57.56%), Query Frame = 1
Query: 592 PTTT---ATPRMGCAVPSNVSRHVRMSRAAAAAIIVVHVLNLGLSHVIAIGYGDFPLRTVWLSCLVAIVAGGIHLGQFKMCSYIAAGSLYLVGCVLDILALSLWTEGFDPWDDDGIDGPRIVILNIMRFPALQALGALTFITGNVFTFLAVCSWEQSGGPGSVALAMSDGPQ 1098
PTTT A C VP NVS HVR SR A A IVVH + L +A G+ L +WL+ L++ + GGI L QF C+YI AGSL+++GC+ D+++++ W + D+ +G + + F ALGAL+FI VF FLA+C+WE+SG P ++ M G Q
Sbjct: 14 PTTTVVHAQNGCSCTVPPNVSGHVRGSRGATIATIVVHAIAL-----LAFGW---ILWGIWLASLISFIMGGILLCQFNKCTYIVAGSLFILGCIFDLVSMAAWIA-YATSDNYYYNGSELSSA-VGWFALPAALGALSFIVAIVFIFLAICNWEKSGAPDAMGPPMPGGAQ 175
BLAST of mRNA_P-fluviatile_contig20.4290.1 vs. uniprot
Match: A0A6H5K1J6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J6_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 6.260e-19 Identity = 57/146 (39.04%), Postives = 87/146 (59.59%), Query Frame = 1
Query: 661 SRAAAAAIIVVHVLNLGLSHVIAIGYGDFPLRTVWLSCLVAIVAGGIHLGQFKMCSYIAAGSLYLVGCVLDILALSLWTEGFDPWDDDGIDGPRIVILNIMRFPALQALGALTFITGNVFTFLAVCSWEQSGGPGSVALAMSDGPQ 1098
SR A A IVVH + L +A G+ + +VWL+ L++ + GGI L QF C+YI AGSL+++GC+ D++A++ W D+ +G ++ + F ALGAL+FI VF FLA+C+WE+SG P ++ M+ G Q
Sbjct: 28 SRGATIASIVVHAIAL-----LAFGWIAW---SVWLASLISFIMGGILLCQFNKCTYIVAGSLFILGCIFDLVAMAAWIA-LATSDNYYYNGTQLTSA-VGWFALPAALGALSFIIAIVFIFLAICNWEKSGAPDAMGPPMAGGAQ 163 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig20.4290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig20.4290.1 >prot_P-fluviatile_contig20.4290.1 ID=prot_P-fluviatile_contig20.4290.1|Name=mRNA_P-fluviatile_contig20.4290.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=354bp MHQQLTTVTVPEDSARRCCCRVPGYVSVRVKRARAAAITIIVVHMVAILVback to top mRNA from alignment at P-fluviatile_contig20:760613..788839- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig20.4290.1 ID=mRNA_P-fluviatile_contig20.4290.1|Name=mRNA_P-fluviatile_contig20.4290.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=28227bp|location=Sequence derived from alignment at P-fluviatile_contig20:760613..788839- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig20:760613..788839- >mRNA_P-fluviatile_contig20.4290.1 ID=mRNA_P-fluviatile_contig20.4290.1|Name=mRNA_P-fluviatile_contig20.4290.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2124bp|location=Sequence derived from alignment at P-fluviatile_contig20:760613..788839- (Porterinema fluviatile SAG_2381)back to top |