mRNA_P-fluviatile_contig2.4048.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig2.4048.1
Unique NamemRNA_P-fluviatile_contig2.4048.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig2.4048.1 vs. uniprot
Match: D7FSR1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSR1_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 4.720e-92
Identity = 154/159 (96.86%), Postives = 155/159 (97.48%), Query Frame = 1 
Query:  163 MAD-KKKSRKERQRELRMLEKDISGGKSVIDYSKVNERHMDDKRFERELKHKEVLQKQADQGASKESEQAPSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRKKMVEYRAQLDKERESALARGRNRPKRKLGVSSSESEGE 636
            MAD KKKSRKERQRELRMLEKDISGGKSVIDY KVNERHMDDKRFERELKHKEVLQKQADQGASKESEQAPSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRKKMVEYRAQLDKERESALA+GRNRPKRKLGVSSSE  GE
Sbjct:    1 MADSKKKSRKERQRELRMLEKDISGGKSVIDYGKVNERHMDDKRFERELKHKEVLQKQADQGASKESEQAPSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRKKMVEYRAQLDKERESALAKGRNRPKRKLGVSSSEXXGE 159
[Close]
BLAST of mRNA_P-fluviatile_contig2.4048.1 vs. uniprot
Match: A0A836CAI5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI5_9STRA)

HSP 1 Score: 148 bits (374), Expect = 7.340e-39
Identity = 92/172 (53.49%), Postives = 119/172 (69.19%), Query Frame = 1 
Query:  163 MADKKK-SRKERQRELRMLEKDISGGKSVIDYSKVNERHMDDKRFERELKHKEVLQK--------QADQGASKESEQ-------APSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRKKMVEYRAQLDKERESALARGRNRPKRKLGVSSSESE 630
            M+DK+K S+KER++E R LE+ + GG S +DYSKV++RH+DDKRFEREL+HK+ L+         +A  G  + S         APSA YDAF+RMQ G   RTIADKINDPNR++W+ F+K NADKLD+ G D KKMVEYR QLD+ERE  LA  R+  K+K G +   S+
Sbjct:    1 MSDKRKLSKKEREKEHRRLERGVQGG-SGVDYSKVSDRHVDDKRFERELEHKKNLEAAPYAIGKGEAGAGGDQASRTKTLLLHAAPSAAYDAFIRMQAGLGERTIADKINDPNRITWDHFKKVNADKLDLVGNDLKKMVEYRKQLDREREGRLAASRD-GKKKQGKAHKHSD 170
[Close]
BLAST of mRNA_P-fluviatile_contig2.4048.1 vs. uniprot
Match: A0A7S3Y9Y5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y9Y5_HETAK)

HSP 1 Score: 127 bits (320), Expect = 2.180e-32
Identity = 75/141 (53.19%), Postives = 101/141 (71.63%), Query Frame = 1 
Query:  172 KKKSRKERQRELRMLEKDISGGKSVIDYSKVNERHMDDKRFERELKHKEVLQKQADQGASKES-EQAPSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRKKMVEYRAQLDKERESALARGRNR 591
            KKK+RKER RELR    D       ++YS +++RH DD RFEREL+ K+ LQ+++ +   +E   +APSATYDAFMRM TGQ+ RTI +KI D NR +W+Q++KD+ DKL+I GA+ KKM+EYR QLD  RE AL   ++R
Sbjct:    8 KKKTRKERLRELR---DDGFAKGGTVNYSVIHDRHKDDVRFERELEFKQKLQEESGKMEDEEGGAKAPSATYDAFMRMATGQQERTIQEKIADSNRPTWDQYKKDHEDKLEIAGAELKKMIEYRKQLDANREKALNDAKSR 145
[Close]
BLAST of mRNA_P-fluviatile_contig2.4048.1 vs. uniprot
Match: A0A7S2SNX5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNX5_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.270e-30
Identity = 78/158 (49.37%), Postives = 99/158 (62.66%), Query Frame = 1 
Query:  175 KKSRKERQRELRMLEKDISGGKSV-IDYSKVNERHMDDKRFERELKHKEVLQKQADQGASKESEQAP----SATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRKKMVEYRAQLDKERESALARGRNRP-KRKLGVSSSESE 630
            KKSRKER  E R  E+D+   K   + Y KV +RH+DD RFEREL  K+ +Q        +E + A     SATYDAFMRM TG++ RTIADKIND NR +W++++K N + LD+ G   +KM+EYR  LD+ RE  LARG N   KRK    SS  E
Sbjct:   11 KKSRKERLAEQRAFERDLGLNKGTGVRYDKVADRHLDDVRFERELAFKKSMQPGGKAEVGEEMQAAAPAQSSATYDAFMRMATGRQERTIADKINDSNRPTWDEYKKKNEELLDMDGVQHRKMMEYRKTLDEARERELARGTNHSSKRKTAAISSSDE 168
[Close]
BLAST of mRNA_P-fluviatile_contig2.4048.1 vs. uniprot
Match: A0A812SC88_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SC88_SYMMI)

HSP 1 Score: 122 bits (306), Expect = 9.720e-30
Identity = 69/128 (53.91%), Postives = 91/128 (71.09%), Query Frame = 1 
Query:  247 IDYSKVNERHMDDKRFERELKHKEVLQKQADQGASKESEQAPSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRKKMVEYRAQLDKERESALARGRNRPKRKLGVSSSESE 630
            ++Y++V E  +DDKR ERE   KE  +KQ D  A + S QA S+T+DAF RM  G E RT+A+KI DPNR SWEQ++KDN DKLD+ GA+ +KM EYRAQLD+ERE  LA+GR+   ++   S SE +
Sbjct:   20 VNYAQVLEHRIDDKRHERE---KEYKRKQMDGTAVQPSRQAASSTFDAFQRMAAGLEGRTLAEKIADPNRPSWEQYKKDNEDKLDMMGAEMRKMTEYRAQLDREREEKLAKGRSNSYKRNLYSDSEED 144
[Close]
BLAST of mRNA_P-fluviatile_contig2.4048.1 vs. uniprot
Match: K8Z8M7_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8M7_NANGC)

HSP 1 Score: 107 bits (268), Expect = 2.400e-23
Identity = 76/177 (42.94%), Postives = 95/177 (53.67%), Query Frame = 1 
Query:  136 PSWSKTRGNMADKKKSRKERQRELRMLEKDISGGKSVIDYSKVNERHMDDKRFERELKHKEVLQKQADQ----GASKESEQA-----------PSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRKKMVEYRAQLDKERESALARGRNRPKRKLGVSSS 621
            P  + T      KK SRKER+RELR L  D  G     D   V +RH+DD+R+ERE+  K+               K+   A           PSA +DA +RM+ G   RTI D INDPNR SWE ++K  ADKLD+ GAD +KM+EYRAQLD ER   LA+ R   + K G   S
Sbjct:   47 PVMADTTSEEKKKKLSRKERERELRALTSDGRGCGFKKDL--VADRHLDDQRYEREIAFKKQXXXXXXXXXXGSGGKDKAGAVIPGVTLGAPPPSAAFDALIRMEAGLGQRTIHDNINDPNRPSWEDYKKAKADKLDLAGADERKMIEYRAQLDAERARRLAQNRGEKEEKDGKKKS 221
[Close]
BLAST of mRNA_P-fluviatile_contig2.4048.1 vs. uniprot
Match: W7TNC4_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNC4_9STRA)

HSP 1 Score: 107 bits (266), Expect = 5.780e-23
Identity = 74/165 (44.85%), Postives = 92/165 (55.76%), Query Frame = 1 
Query:  172 KKKSRKERQRELRMLEKDISGGKSVIDYSKVNERHMDDKRFERELKHKEVLQKQADQ----GASKESEQA-----------PSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRKKMVEYRAQLDKERESALARGRNRPKRKLGVSSS 621
            KK SRKER+RELR L  D  G     D   V +RH+DD+R+ERE+  K+               K+   A           PSA +DA +RM+ G   RTI D INDPNR SWE ++K  ADKLD+ GAD +KM+EYRAQLD ER   LA+ R   + K G   S
Sbjct:   11 KKLSRKERERELRALTSDGRGCGFKKDL--VADRHLDDQRYEREIAFKKXXXXXXXXXXXXSGGKDKAGAMIPGVTLGAPPPSAAFDALIRMEAGLGQRTIHDNINDPNRPSWEDYKKAKADKLDLAGADERKMIEYRAQLDAERARRLAQNRGEKEEKDGKKKS 173
[Close]
BLAST of mRNA_P-fluviatile_contig2.4048.1 vs. uniprot
Match: A0A3R7J1T7_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J1T7_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.760e-22
Identity = 61/117 (52.14%), Postives = 78/117 (66.67%), Query Frame = 1 
Query:  241 SVIDYSKVNERHMDDKRFERELKHKEVLQKQADQGASKESEQAP---SATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRKKMVEYRAQLDKERESALARG 582
            S +DYS+V +R +DD RFER+   +        + A   S       SAT DAFMRM TG+E RTIAD+I+DPNR +WEQ++K+NADKLD+ G   K+M EYR +LD  RE ALARG
Sbjct:   14 SGVDYSQVLDRQIDDDRFERQRAIRAAAAAPPVEKAKPSSSNVATPQSATMDAFMRMMTGKEERTIADRISDPNRPTWEQYKKENADKLDLSGNGEKEMKEYRKKLDAAREKALARG 130
[Close]
BLAST of mRNA_P-fluviatile_contig2.4048.1 vs. uniprot
Match: A0A482STU7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STU7_9ARCH)

HSP 1 Score: 101 bits (251), Expect = 4.210e-22
Identity = 61/130 (46.92%), Postives = 86/130 (66.15%), Query Frame = 1 
Query:  247 IDYSKVNERHMDDKRFERELKHKEVLQKQADQGASKESEQAPSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRKKMVEYRAQLDKERESALARGRNRPKRKLGVSSSESEGE 636
            ++Y +V +R + DKRFERE    + +++ +   A K      S+T+DAF RM  G E RTI+DKINDP R +WEQ++K+N DKLDI G++ +KMVEYRAQLDKER+  L       KR+L V  S+ + +
Sbjct:   16 VNYEQVLDRQVGDKRFERE----KTVRESSGAAAVKP---VMSSTFDAFQRMAAGLEGRTISDKINDPTRPTWEQYKKENEDKLDIVGSEVRKMVEYRAQLDKERDDRL----KSRKRELFVEDSDEKSD 134
[Close]
BLAST of mRNA_P-fluviatile_contig2.4048.1 vs. uniprot
Match: A0A7S2RE01_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RE01_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.330e-21
Identity = 59/145 (40.69%), Postives = 85/145 (58.62%), Query Frame = 1 
Query:  241 SVIDYSKVNERHMDDKRFERELKHKEVLQK---------------QADQGASKESEQAPSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKDNADKLDIPGADRKKMVEYRAQLDKERESALARGRNRPKRKLGVSSSESE 630
            S ++YS++++RH+DD R+E+    KE                     + G+   +   PSA  +A MR+  G E RTIA K+ D NR +WEQ++KDN DKL+I G D+KKM EYR QLD+ER+  L+RG N    K  +SSS+ +
Sbjct:   10 SGVNYSQISDRHVDDARYEKHKAEKESTSSGXXXXXXSGNVRSSANNNAGSGGTTTSVPSAQMEAVMRLMAGMEERTIAQKLADSNRPTWEQYKKDNEDKLNISGVDQKKMEEYRKQLDEERDKILSRGTNHGG-KTSLSSSDKK 153
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig2.4048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSR1_ECTSI4.720e-9296.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAI5_9STRA7.340e-3953.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3Y9Y5_HETAK2.180e-3253.19Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2SNX5_9STRA2.270e-3049.37Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A812SC88_SYMMI9.720e-3053.91Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
K8Z8M7_NANGC2.400e-2342.94Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
W7TNC4_9STRA5.780e-2344.85Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A3R7J1T7_9STRA1.760e-2252.14Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A482STU7_9ARCH4.210e-2246.92Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2RE01_9STRA1.330e-2140.69Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig2contigP-fluviatile_contig2:3589930..3593234 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score287.3
Seed ortholog evalue8.6e-75
Seed eggNOG ortholog2880.D7FSR1
EggNOG free text desc.lysine N-methyltransferase activity
EggNOG OGsKOG2793@1,KOG2793@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-03_002850.1
Exons6
Model size969
Cds size969
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig2.4048.1prot_P-fluviatile_contig2.4048.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig2 3589930..3593234 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815867.693361-CDS-P-fluviatile_contig2:3589929..35901991622815867.693361-CDS-P-fluviatile_contig2:3589929..3590199Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 3589930..3590199 +
1693563590.8607793-CDS-P-fluviatile_contig2:3589929..35901991693563590.8607793-CDS-P-fluviatile_contig2:3589929..3590199Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 3589930..3590199 +
1622815867.7050009-CDS-P-fluviatile_contig2:3590740..35909501622815867.7050009-CDS-P-fluviatile_contig2:3590740..3590950Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 3590741..3590950 +
1693563590.8792741-CDS-P-fluviatile_contig2:3590740..35909501693563590.8792741-CDS-P-fluviatile_contig2:3590740..3590950Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 3590741..3590950 +
1622815867.7154903-CDS-P-fluviatile_contig2:3591222..35913451622815867.7154903-CDS-P-fluviatile_contig2:3591222..3591345Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 3591223..3591345 +
1693563590.8945577-CDS-P-fluviatile_contig2:3591222..35913451693563590.8945577-CDS-P-fluviatile_contig2:3591222..3591345Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 3591223..3591345 +
1622815867.7309642-CDS-P-fluviatile_contig2:3591743..35919161622815867.7309642-CDS-P-fluviatile_contig2:3591743..3591916Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 3591744..3591916 +
1693563590.902675-CDS-P-fluviatile_contig2:3591743..35919161693563590.902675-CDS-P-fluviatile_contig2:3591743..3591916Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 3591744..3591916 +
1622815867.742753-CDS-P-fluviatile_contig2:3592269..35923841622815867.742753-CDS-P-fluviatile_contig2:3592269..3592384Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 3592270..3592384 +
1693563590.910363-CDS-P-fluviatile_contig2:3592269..35923841693563590.910363-CDS-P-fluviatile_contig2:3592269..3592384Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 3592270..3592384 +
1622815867.75356-CDS-P-fluviatile_contig2:3593156..35932341622815867.75356-CDS-P-fluviatile_contig2:3593156..3593234Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 3593157..3593234 +
1693563590.9198763-CDS-P-fluviatile_contig2:3593156..35932341693563590.9198763-CDS-P-fluviatile_contig2:3593156..3593234Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 3593157..3593234 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig2.4048.1

>prot_P-fluviatile_contig2.4048.1 ID=prot_P-fluviatile_contig2.4048.1|Name=mRNA_P-fluviatile_contig2.4048.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=323bp
MVTLLAYSEPGRASGSERKLHAKFKPRRLDSTNTERHRCILSFRPPSWSK
TRGNMADKKKSRKERQRELRMLEKDISGGKSVIDYSKVNERHMDDKRFER
ELKHKEVLQKQADQGASKESEQAPSATYDAFMRMQTGQETRTIADKINDP
NRVSWEQFRKDNADKLDIPGADRKKMVEYRAQLDKERESALARGRNRPKR
KLGVSSSESEGEDGGDGGTDSDNGGSASKRKKRKRGRKDKKSKKSGKHKS
RRKKSSKRRMDSGGDSSDDSDSDTASSGESSRRRRRKEKKSKKREEKKAE
SKGPDPRRLSAFLQGSSGSESN*
back to top

mRNA from alignment at P-fluviatile_contig2:3589930..3593234+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig2.4048.1 ID=mRNA_P-fluviatile_contig2.4048.1|Name=mRNA_P-fluviatile_contig2.4048.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3305bp|location=Sequence derived from alignment at P-fluviatile_contig2:3589930..3593234+ (Porterinema fluviatile SAG_2381)
ATGGTGACATTGCTTGCCTACTCAGAACCAGGCCGAGCTAGTGGATCTGA
GCGAAAACTCCACGCAAAGTTCAAGCCACGTCGTCTTGATTCTACAAACA
CCGAAAGGCATCGGTGTATTTTGAGTTTCCGCCCCCCGTCCTGGTCGAAA
ACGCGCGGGAACATGGCGGACAAGAAGAAGTCACGCAAGGAGAGGCAGAG
GGAGTTGCGGATGTTGGAGAAGGACATCTCCGGAGGAAAGTCTGTCATAG
ACTACAGCAAAGTAAATGAGGTGAGTGCTGGCGCGCAAATTCTTGCAGCG
GGCCTCAGAAACAGATGAAATGCCGGTGACGGTACGGTCAGGACAACCTT
GTTTCCACACACACACAGCTACACACGCCCTTCTCCGCAACATCGTAGAA
ACACGCCGATCCATTCGCCGTTTTCGAAATGTTACCCTCAACGCAAACTT
TCACTGGGAACAAAGGCTGTGTCGCCACCTTGGGGGTATCCGAAACCGAA
AATTGTGTAGATGGAGCAACATACATCGCAACGTGGGCAGCACACAGCTG
CAAGGCACCCACCGTGCCATTTGCGATCTGTGTTCCTATTTGACCCTTTT
TGTGTTGCGCGTTGTGAAGCTTGGCGCTCGAGCTCGAAGACCAAATGTCG
CCTGCTTGCCGAATCGATACACGGCGCGGTCGCACGTTATTTTCTTCATC
CGGCGAGCACGTAACCGCTGCCCCCCGAACCACGCCACCCCCCCCTGCCC
CCCTACCCACTCTTTCTCCGCCCGCCGCTCCCATCCTTCGCGAAACGAAC
CCCGCGCCCAGAGACATATGGACGACAAGCGGTTCGAGCGCGAGCTCAAG
CACAAGGAGGTGCTGCAGAAGCAGGCGGACCAGGGGGCCAGCAAGGAGTC
GGAGCAGGCTCCCAGCGCAACCTACGACGCCTTCATGAGGATGCAGACGG
GGCAGGAAACACGCACCATCGCCGACAAGATCAACGACCCCAACAGGGTG
TCCTGGGAGCAGTTTCGGAAGGTGGGGTTCGGGGTGACGAAGGAAGGAAA
AGTTTTGGAGGAAAGGGTGGCGGGAGGGGGGAGCAAGGACTAGCGCGGGC
GCTTGCGTGGGACGGGATGCGGCCGTCCCTCTGGGGACATGTATTTCAGG
TGTTCAGCCACGAAAAGAGAGACAGACCGCGACCAGCGCAGTTACACCTT
TTCCGACCATCGCCATGTGTCGTTGTTCTGTTTTGCGTCACACCTGTCCT
CCCCGTCCTCTTCTCTCCTCCTCCCTGCTCTTCCCGGCTGCAGGATAATG
CCGACAAGCTTGACATACCCGGCGCAGACCGCAAGAAGATGGTGGAGTAC
CGCGCGCAGCTGGACAAGGAGCGAGAGTCCGCCCTCGCCAGGGGCAGGAA
CAGGCCCAAGAGGAAGGTGGGCTTCCTTCGTTGGGGGCTGAAAAGGGCAC
AGGAGCGCAAGGCAAAGAAGCCAATCAAGGGTGATAAAACCTAGCTGCCT
TCAGCTGCCCACGTGCACGGCGAACGGAGTTCAGATCAGAGCCACTAGTG
TGAACGGCCGGGGCAAATGTATGATGAGATGTTCACTTGGTGGGTTCATT
GGTTTTCCTGGCCCTTATTCGTCCACGCCCTTAAGCGCTTTCGTCATTGA
TCATTGCGGAGAGTGACGGAGGCGGATCGCTGTGAGCGCAGGTTGATTGG
GCACGCTGGTGCGAGCCTGCGTGGCGCGAGCCCGCTGACGCGTGCACACC
CAGGGAACCACCATGCTTACCTAGTGCCTGTACGCCTGACGCGCGCGCCC
GGCGTTTGTGGCAGCTTGGCGTCAGCTCTTCCGAGAGCGAGGGAGAAGAC
GGGGGGGATGGCGGCACTGACAGCGACAACGGAGGGTCCGCTTCGAAGCG
AAAAAAACGCAAGAGGGGCAGGAAGGACAAGAAGAGCAAGAAGAGCGGCA
AGCACAAGAGCAGGCGCAAGAAGTCGTCCAAGAGGCGGTGAGTGAGTCAT
GGTTCAACTTGAAATTGTCCTGTGCTCGCTCGGAGCAAAATCAACACGCC
CTCCTCGCGCCGTGCGCAGCGTGCGATTTCGTTCTTTCCCCGCACGTGCG
CTTTGTGTTTTCTTCCGTGCCAAATCACGCGAAACCATTACGTTCTGTGA
GGCTTTGTCGTGCGACCAACTTTTCCCCCGAGCGAATTTCTTTTTTTCAC
CACGTCTTATCCCGTTGCGGCGTGTAGCGCGTGCTTTTCGGTTTCCCAAC
CACCGAAGGTACCATTTCGTTTTTATTCAACTCATGTTGGTTCTCTTGCG
GCGTTGTGGGCGTCTTGTTGTTTCTCGACTGTTTGTTCAGGATGGACAGC
GGCGGAGACAGCAGCGACGACTCCGACAGCGACACCGCCTCTTCCGGGGA
GAGCAGCAGACGACGTCGTAGGAAAGAGAAGAAGAGCAAGAAGAGAGAAG
AAAAGGTGAAAAATAATCGTATTTCGTCTCATTGTGCACACGAGCGACAG
GCCGGGAGACATTCAGGGACAACGGCATGAGAGAGGAAAAGGCACGTTCT
AGGATAGTTCCTGTAAGGACAGACAAGAGGCGCGGGAGGAAAGTGGCAAG
GCACGTTGATTTCATTTGCATCGTTTCATTAATTGATACAGGCAAAACAA
CAAGGAGCAGCAAGAAAAGGAATACTTGTTAAAAGCAAGACATCCCAACT
AAGAAGCATGAGAGACAAGCGAGCAAGGGGCACATAGGAAGGGGCGTACA
TATTTCCCTACCTCTGCAGCCACGCTTTCATCGACAGAACTTGAGCCCTC
GCCGTCGTCTGGAGTGACTTGAAAATGTTGAAATGTGTTCGGTTTTGTAC
ACCGGCCCATGACTGCAGAGTTTGTGTTGCAATCCGACCTGCTGTAAGTA
TCCCCGTTCATGACAATTACCCTCCCCGGCAGGTTCGTATTTCCTTTCGT
GTGGTTTCTTGCTCGCAGTTTTTATTTCGATAAGTTTCTGGTATGGTGGT
TTGGTTTTGATGTACAACTTGGAAAGTGCCTTGTGTCTCAAATCGGATGT
CTTCGTGAGAGCTCCCGCCCTCCCTCACCCGACTCATTTCGGCGCCTCCA
CTGAATCGTCACTGCACGTTGAGTACGCACGCCTGGTGCCCCGTGTTGTC
TTCCTCACTGCCCCGTTTCGCACCGCCCTCCCCATCTCTTCGATATTCGT
GCTCGTCTCGTTTTTGTTTTTCCGAAGAAGGCGGAATCGAAGGGTCCTGA
CCCGCGGAGACTGTCTGCCTTCCTCCAGGGCTCTTCCGGCAGCGAAAGTA
ACTAG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig2:3589930..3593234+

>mRNA_P-fluviatile_contig2.4048.1 ID=mRNA_P-fluviatile_contig2.4048.1|Name=mRNA_P-fluviatile_contig2.4048.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1938bp|location=Sequence derived from alignment at P-fluviatile_contig2:3589930..3593234+ (Porterinema fluviatile SAG_2381)
ATGGTGACATTGCTTGCCTACTCAGAACCAGGCCGAGCTAGTGGATCTGA
GCGAAAACTCCACGCAAAGTTCAAGCCACGTCGTCTTGATTCTACAAACA
CCGAAAGGCATCGGTGTATTTTGAGTTTCCGCCCCCCGTCCTGGTCGAAA
ACGCGCGGGAACATGGCGGACAAGAAGAAGTCACGCAAGGAGAGGCAGAG
GGAGTTGCGGATGTTGGAGAAGGACATCTCCGGAGGAAAGTCTGTCATAG
ACTACAGCAAAGTAAATGAGATGGTGACATTGCTTGCCTACTCAGAACCA
GGCCGAGCTAGTGGATCTGAGCGAAAACTCCACGCAAAGTTCAAGCCACG
TCGTCTTGATTCTACAAACACCGAAAGGCATCGGTGTATTTTGAGTTTCC
GCCCCCCGTCCTGGTCGAAAACGCGCGGGAACATGGCGGACAAGAAGAAG
TCACGCAAGGAGAGGCAGAGGGAGTTGCGGATGTTGGAGAAGGACATCTC
CGGAGGAAAGTCTGTCATAGACTACAGCAAAGTAAATGAGAGACATATGG
ACGACAAGCGGTTCGAGCGCGAGCTCAAGCACAAGGAGGTGCTGCAGAAG
CAGGCGGACCAGGGGGCCAGCAAGGAGTCGGAGCAGGCTCCCAGCGCAAC
CTACGACGCCTTCATGAGGATGCAGACGGGGCAGGAAACACGCACCATCG
CCGACAAGATCAACGACCCCAACAGGGTGTCCTGGGAGCAGTTTCGGAAG
AGACATATGGACGACAAGCGGTTCGAGCGCGAGCTCAAGCACAAGGAGGT
GCTGCAGAAGCAGGCGGACCAGGGGGCCAGCAAGGAGTCGGAGCAGGCTC
CCAGCGCAACCTACGACGCCTTCATGAGGATGCAGACGGGGCAGGAAACA
CGCACCATCGCCGACAAGATCAACGACCCCAACAGGGTGTCCTGGGAGCA
GTTTCGGAAGGATAATGCCGACAAGCTTGACATACCCGGCGCAGACCGCA
AGAAGATGGTGGAGTACCGCGCGCAGCTGGACAAGGAGCGAGAGTCCGCC
CTCGCCAGGGGCAGGAACAGGCCCAAGAGGAAGGATAATGCCGACAAGCT
TGACATACCCGGCGCAGACCGCAAGAAGATGGTGGAGTACCGCGCGCAGC
TGGACAAGGAGCGAGAGTCCGCCCTCGCCAGGGGCAGGAACAGGCCCAAG
AGGAAGCTTGGCGTCAGCTCTTCCGAGAGCGAGGGAGAAGACGGGGGGGA
TGGCGGCACTGACAGCGACAACGGAGGGTCCGCTTCGAAGCGAAAAAAAC
GCAAGAGGGGCAGGAAGGACAAGAAGAGCAAGAAGAGCGGCAAGCACAAG
AGCAGGCGCAAGAAGTCGTCCAAGAGGCGCTTGGCGTCAGCTCTTCCGAG
AGCGAGGGAGAAGACGGGGGGGATGGCGGCACTGACAGCGACAACGGAGG
GTCCGCTTCGAAGCGAAAAAAACGCAAGAGGGGCAGGAAGGACAAGAAGA
GCAAGAAGAGCGGCAAGCACAAGAGCAGGCGCAAGAAGTCGTCCAAGAGG
CGGATGGACAGCGGCGGAGACAGCAGCGACGACTCCGACAGCGACACCGC
CTCTTCCGGGGAGAGCAGCAGACGACGTCGTAGGAAAGAGAAGAAGAGCA
AGAAGAGAGAAGAAAAGGATGGACAGCGGCGGAGACAGCAGCGACGACTC
CGACAGCGACACCGCCTCTTCCGGGGAGAGCAGCAGACGACGTCGTAGGA
AAGAGAAGAAGAGCAAGAAGAGAGAAGAAAAGAAGGCGGAATCGAAGGGT
CCTGACCCGCGGAGACTGTCTGCCTTCCTCCAGGGCTCTTCCGGCAGCGA
AAGTAACTAGAAGGCGGAATCGAAGGGTCCTGACCCGCGGAGACTGTCTG
CCTTCCTCCAGGGCTCTTCCGGCAGCGAAAGTAACTAG
back to top