mRNA_P-fluviatile_contig2.3937.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig2.3937.1
Unique NamemRNA_P-fluviatile_contig2.3937.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Match: A0A6H5JAX8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAX8_9PHAE)

HSP 1 Score: 466 bits (1199), Expect = 8.700e-160
Identity = 261/416 (62.74%), Postives = 303/416 (72.84%), Query Frame = 1
Query:    1 MVSSTGATLNRAVLRDSWQLLAAASFSIGIAAAIAWSAGRVCFRRPEDRRAFRPVGLAVTFANTAGFPLLLMGALCEQDYVKSDFGDDAVECFTQATGMIFIYVVVWQAFFFGWGFFALGHDDTLERKLTGEPPKSQILRTPRERISSRSDPSSELPQQVENNSRPNGISDLGGERATAGGNGAEVIDVDEST--------TGNSGGISKG-DRGGGKGWAELQQRGRRILLSPVIVAVTTGVVIAMIAPLQKMLFDNPRAVLRPLGAALQTVGQPEVAVSTLVMAGSLAHVPNAAVASTTA------------RNYRILAGFLHVVCRLIVVPAVGFATFWVARTQSMVTGENRLMHFILLIEFAMPSAAFVIVSLNQLRLPATAGFMARMYLWQYVASMFTVAAWTALALHLVY 1185
            M+SS GATLN   L++SWQL+ A SF++ ++  +AW  GRV FRRPEDRRAFRP GLA+TFAN+AGFPLLLM ALCEQDYV+SD+ DDA+ECFTQATGMIFIYVVVWQ +FFGWGF+ALGHDDTLER LTG+  +++   T        +  +S   Q+     R N                A VID++  T        T N+GG   G D   G  WA  ++R  R+L+SP I++VT GVVIAMIAPLQ+MLFDN R++LRPLGAALQTVG PEVAVSTLVMAGSLA VP  A AST              R +RI+AGFLHVVCRLIVVPA+GF  FWVARTQS V GENRLMH ILLIEFAMPSAAFVIVSLNQLR+PATAGFMAR+YLWQY ASM T+ AWTALA+HLVY
Sbjct:   59 MISSLGATLNPEALKNSWQLVVAGSFTVALSGTVAWVVGRVFFRRPEDRRAFRPAGLAITFANSAGFPLLLMNALCEQDYVRSDYNDDALECFTQATGMIFIYVVVWQMYFFGWGFYALGHDDTLERSLTGQQTRTRTPSTKXXXXXXXTSSTSSARQEHGGVGRINAAE-------------AVVIDIEPCTGEESSSEGTTNAGGTEDGGDVSEGGPWAGFKERVSRVLVSPNIISVTIGVVIAMIAPLQEMLFDNSRSILRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTVAAASTQGGQGDDDGTLRRKRRFRIIAGFLHVVCRLIVVPAIGFTLFWVARTQSSVMGENRLMHLILLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 461          
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Match: D7FW26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW26_ECTSI)

HSP 1 Score: 424 bits (1089), Expect = 5.650e-143
Identity = 246/419 (58.71%), Postives = 290/419 (69.21%), Query Frame = 1
Query:    1 MVSSTGATLNRAVLRDSWQLLAAASFSIGIAAAIAWSAGRVCFRRPEDRRAFRPVGLAVTFANTAGFPLLLMGALCEQDYVKSDFGDDAVECFTQATGMIFIYVVVWQAFFFGWGFFALGHDDTLERKLTGEPPKSQILRTPRERISSRSDPSSELPQQVENNSRPNGISDLGGERATAGGNGAEVIDV---DESTTGNSGGISK------GDRGGGKGWAELQQRGRRILLSPVIVAVTTGVVIAMIAPLQKMLFDNPRAVLRPLGAALQTVGQPEVAVSTLVMAGSLAHVPNAAVASTTA---------------RNYRILAGFLHVVCRLIVVPAVGFATFWVARTQSMVTGENRLMHFILLIEFAMPSAAFVIVSLNQLRLPATAGFMARMYLWQYVASMFTVAAWTALALHLVY 1185
            M + TGATL    L+D+WQL+   SF+IG +  +AW  GRV FRRPEDRRAFRP  LA+ F N+AGFPLLL+ ALCEQDY+ SDF DD VECFTQATGMIFIYVVVWQ +F+ WGF+ALG DD LERKL GE  KS     P E  +   + SS   +  + ++ P   ++ G  R +   +GA V+     +E  +G SG  +       GD  G   WA L++R  R+++SP ++AV  GV IAMI  LQ+ LFDNPRAVLRPLGAA++T+G P VAVSTLVMAGSL  VP    AS  A               R +RIL GFLHVVCRLIVVPAVGF  FWVAR QS V GENRLMH ILLIE AMPSAAFVIVSLNQLR+PATAGFMAR+YLWQY ASM T+ AWTALA+HLVY
Sbjct:   59 MTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALGQDDELERKLAGEAAKS-----PSEATTDDVEISSPC-EIAQGDALPPRQAEGGSGRQSPTHDGAVVVGASRRNEGVSGTSGTAAASHAGKDGDDEGCCSWAGLRRRLWRLVVSPNMIAVAIGVTIAMIPALQEQLFDNPRAVLRPLGAAVETIGSPTVAVSTLVMAGSLVQVPTVGAASAAASQGGQGDDDGTLRRWRRFRILVGFLHVVCRLIVVPAVGFTLFWVARNQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMVTITAWTALAVHLVY 471          
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Match: A0A6H5J918_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J918_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 2.060e-80
Identity = 218/628 (34.71%), Postives = 269/628 (42.83%), Query Frame = 1
Query:    1 MVSSTGATLNRAVLRDSWQLLAAASFSIGIAAAIAWSAGRVCFRRPEDRRAFRPVGLAVTFANTAGFPLLLMGALCEQDYVK-------SDFGDDAVECFTQATGMIFI------------------------YVVVWQAFFFGWGFFALGHDDTLERKLTGEPPKSQILRTPRERISSRSDPSSELPQQVENNSRPNGISDLGGERATAGGNGAEVIDVDESTTGNSG---------GISKGDRGGGKGWAELQQRGRRILLSPVIVAVTTGVVIAMIAPLQKMLFDNPRAVLRPLGAALQ----------------TVGQPEVAVSTLVMAGSLAHVPNAAVASTTA---------------RNYRILAGFLHVVCRLIV------------------------------------------------------------------------------------------------------------------------------------------------------------------VPAVGFATFWVARTQSMVTGENRLMHFILLIEFAMPSAAFVIVSLNQLRLPATAGFMARMYLWQYVASMFTVAAWTALALHLVY 1185
            M + TGATL    L+D+WQL+   SF+IG +  +AW  GRV F+RPEDRRAFRP  LA+ F N+AGFPLLL+ ALCEQDY+          F +  +    + TG+                           Y  + Q +F+ WGF+ALG DD LERKL GE  K      P E  +   + SS   +  + ++ P   +D G    +   +GA ++       G SG             GD  G   WA L++R  R+ +SP ++AV  GV+IAM+  LQ++LFD+PRAVLRP GAA++                T+G P VAVSTLVMAGSL  VP     S  A               R +RI+ GFLHVVCRLIV                                                                                                                                                                  VPAVGF  FWVAR QS V GENRLMH ILLIE AMPSAAFVIVSLNQLR+PATAGFMAR+YLWQY ASM T+ AWTALA+HLVY
Sbjct:   56 MTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFQRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINRWPTQNTKLFDNVLLWRGVETTGLYIATCELAPRPAACSHTLRRQGFSFHGYGQILQVWFYSWGFYALGQDDELERKLAGEEAK-----IPSEATTDDVEISSPC-EIAQGDALPPLQADGGSGMQSPIHDGAVIVGASRRNEGVSGTGGTAVASHAGEDGDDAGCFSWAGLRRRLWRLAVSPNMIAVAIGVIIAMLPALQELLFDSPRAVLRPFGAAIEVGHCSLAATPVAIEQGTIGSPTVAVSTLVMAGSLVQVPTVGAGSAAATQGVQCDDDGTLRRWRRFRIVVGFLHVVCRLIVGEHADPRAARFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVVGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVPAVGFTLFWVARNQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 677          
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Match: A0A6H5J8G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8G0_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 1.500e-77
Identity = 197/551 (35.75%), Postives = 260/551 (47.19%), Query Frame = 1
Query:    1 MVSSTGATLNRAVLRDSWQLLAAASFSIGIAAAIAWSAGRVCFRRPEDRRAFRPVGLAVTFANTAGFPLLLMGALCEQDYVKSDFGDDAVECFTQATGMIFIYVVVWQAFFFGWGFFALGHDDTLERKLTGEPPKSQILRTPRE-----------------------------RISSRSDPSSELPQQVENNSR-------PNGISDLGGERATAGGNGAEV------ID-----------------VDESTTGNSG--------------------------------------------------------------------------------GISKGDRGGGKG------WAELQQRGRRILLSPVIVAVTTGVVIAMIAPLQKMLFDNPRAVLRPLGAALQTVGQPEVAVSTLVMAGSLAHVPNAA-----------VASTTARNYRILAGFLHVVCRLIVVPAVGFATFWVARTQSMVTGENRLMHFILLIEFAMPSAAFVIVSLNQLRLPATAGFMARMYLWQYVASMFTVAAWTALALHLVY 1185
            M++  GA LN   LRDSW L+ +++ SIG++  +AW+ G +  RR + R  FRPV LA+ F N    PL+L  ALCEQD + SDF  D  ECF QATGMIFI++ VWQ +F+ WG +   +D+ LE  LT +P  + +  T RE                             ++SS + P S +   + N+S        P   + + G+RA+    G  V      +D                   ES TG +G                                                                                G   GD  GG+G      W E + R   +L+SPVIVAV  G+VI  I PLQ MLF NP+A+LRPLG A+Q VG P V VS+LVMAGSL  V   A           VA    R  R + GFL V  RL+ +PA  F  FWVA+T S V GENRLMH ILL+EFAMP+A  +I  L+Q+RLP TAGF++R+ +WQY AS  TV+ WTALA+ ++Y
Sbjct:   75 MLAGMGANLNPGALRDSWHLVVSSTLSIGLSNGVAWAFGWLLMRR-DARAKFRPVQLAIAFPNALVVPLVLFDALCEQDLINSDFDGDNNECFDQATGMIFIFLAVWQVWFYAWGVYCFQNDNALELALTSQPAAAPLPTTVRETAISSGGTGPPHAPDPPRCQSGHGNGSITKVSSSTSPPSSVT--LRNSSPKHTLHLIPAEAAKVDGDRASEWAEGGAVGGDSGAVDPQAGAAAAGDETGVVGAATESGTGATGTGAKSHGSPVGSLHSREVGVESTPLGRDQPTLMEQTGRGGCGDADASEVASMPRRRKENKAVADLLVIEEGNVIDGGGARGSGTGDVNGGRGSDSEGPWEEAKHRAWALLVSPVIVAVVAGIVICTIEPLQDMLFHNPQALLRPLGGAIQAVGVPTVTVSSLVMAGSLVAVSAVADEAAPPAGGNEVAVPIWRRPRFVTGFLLVFLRLVAIPAAFFGIFWVAKTYSSVMGENRLMHLILLVEFAMPTATIMIPLLHQIRLPRTAGFISRLLVWQYAASSITVSFWTALAITMLY 622          
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Match: D7FW24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW24_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 8.910e-40
Identity = 88/164 (53.66%), Postives = 110/164 (67.07%), Query Frame = 1
Query:  733 MLFDNPRAVLRPLGAALQTVGQPEVAVSTLVMAGSLAHVPNAAVASTTA-------------RNYRILAGFLHVVCRLIVVPAVGFATFWVARTQSMVTGENRLMHFILLIEFAMPSAAFVIVSLNQLRLPATAGFMARMYLWQYVASMFTVAAWTALALHLVY 1185
            MLF NP+A+LRPLG A+Q VG P V VS+LVMAGSL  V  +AVA+  A             R  R + GFL V  RLI +PA  F  FW A+T S V GENRLMH ILL+EFAMP+A  +I  L+Q+RLP TAGF++R+ +WQY AS  TV+ WTA A+ ++Y
Sbjct:    1 MLFHNPQALLRPLGGAIQAVGVPTVTVSSLVMAGSLVAV--SAVANGAAPSAGGHEAAVPIWRRPRFVMGFLLVFLRLIAIPAAFFGVFWGAKTYSSVMGENRLMHLILLVEFAMPTATIMIPLLHQIRLPRTAGFISRLLVWQYAASSITVSFWTAFAITMLY 162          
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Match: A0A835Z6D5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D5_9STRA)

HSP 1 Score: 125 bits (315), Expect = 4.800e-28
Identity = 143/546 (26.19%), Postives = 216/546 (39.56%), Query Frame = 1
Query:    7 SSTGATLNRAVLRDSWQLLAAASFSIGIAAAIAWSAGRVCFRR-PEDRRAFRPVGLAVTFANTAGFPLLLMGALCEQDYVKSDFGDDAVECFTQATGMIFIYVVVWQAFFFGWGFFALGHDDTLERKLTGEPPKSQILRTPRERISSRSDPSSELPQQV--------------------------------------ENNSRPNGISDLGGERATAGGNGAEVIDVDESTTGNSGGISKGDRGG---------------GKGWAELQQRGR----------RILLSPVIVAVTTGVVIAMIAPLQKMLFDNPRAVLRPLGAALQTVGQPEVAVSTLVMAG--------------------------------------------------------------------------SLAH----VPNAAV----------ASTTARNYRILAGFLHVVCRLIVVPAVGFATFWVARTQS-MVTGENRLMHFILLIEFAMPSAAFVIVSLNQLRLPATAGFMARMYLWQYVASMFTVAAWTALALHLVY 1185
            +S GA L+ ++L +   LL A +    +  AI+W     C +  P + R F+ V +AV F N    PLL M +LC+QD V +D+   A ECF  AT MIF+Y++ W  +F+ WGF+ L   D L+ K T  PP    L      I+   D    +   V                                      + ++  +      G RA A    A +  +  S  G++      D+                   G A L ++ R          R ++SP  VAV  GV I ++  L++ +F +  + LRP+GAA+ T+GQP +A+ TL+MA                                                                           SLAH    +  AA           A  + R   +L   + V+  L+VVPAVGFA F +    +  + G   L+  ++L++  MP A  VIV L+ L LP  A  +AR+YL+QYVAS+ T+ A  A+A+  VY
Sbjct:   16 ASMGANLSTSLLLEYSPLLVADT----VIRAISWVVITACEKLLPVEPRLFKAVKIAVLFCNVGSIPLLYMESLCDQDIVNADYDGSASECFAAATSMIFVYLITWHIWFYSWGFYELAKADDLDEKPTALPPVDNFLGVS---ITGDFDRPHSMAVSVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAGGARTFKLSAAASECDSTTGARAAARAPDALLPPLSHSRCGSAASGPAADKAARAPAFASAAANPDVRANGLAPLPEKQRWWLGGAGGVWRAVVSPPNVAVLLGVTIGVVPALREGMFHDATSPLRPIGAAIVTIGQPTIALQTLLMAARSSSTSPSSDHGTCISTCDRAARSSSSGAAPLSLHSCWVRRESCHQAPYWRRMTFKCTHSHCAPSLPPHSPPPRSLAHSHGRLQLAAAXXXXXXXXXXAQRSLRRSEVLTAAVFVLVPLVVVPAVGFAAFVLLHDNTAFLRGAPPLLQLLILLQLGMPGAQAVIVGLSHLALPRMAAALARLYLYQYVASIATLTALAAVAMMYVY 554          
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Match: A0A836C7K1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7K1_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 2.450e-16
Identity = 74/225 (32.89%), Postives = 110/225 (48.89%), Query Frame = 1
Query:  655 RRILLSPVIVAVTTGVVIAMIAPLQKMLFDNPRAVLRPLGAALQTVGQPEVAVSTLVMAGSLAHV-PNAAVASTTARNYRIL-AGFLH-----------------VVCRLIVVPAVGFATF-WVARTQSMVTGENRLMHFILLIEFAM----------------------------PSAAFVIVSLNQLRLPATAGFMARMYLWQYVASMFTVAAWTALALHLVY 1185
            +R   +P  +AV  GV+I +I PL   LF N R+ LRP+GAA+ TVGQP VA++TL+MA SLA    NAA+ + T     ++ A  LH                 V C L+VVP +GF  F ++     ++     LM  +++ +                               PS   VI+SL+Q+ LPA A  +ARMY++QY+ S+ T+    AL +  +Y
Sbjct:  399 KRAASTPPNIAVALGVIIGLIPPLANGLFHNSRSPLRPIGAAMVTVGQPYVAIATLLMASSLAQSRKNAALPTPTVVGTEVMDAAQLHNAQQEQARREKITMLVLVFCPLVVVPMLGFGIFAFLDNYTPILNSATPLMKLLIIFQVTTTSMLRLMVEIXXXXXXXXXXXXXXXXXXPSGLSVIISLSQMHLPAMASSLARMYMYQYLLSIITLTVLAALTMAYIY 623          
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Match: A0A6A2YYK9_HIBSY (Auxin efflux carrier family protein isoform 1 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YYK9_HIBSY)

HSP 1 Score: 68.2 bits (165), Expect = 7.140e-9
Identity = 51/187 (27.27%), Postives = 94/187 (50.27%), Query Frame = 1
Query:  631 WAELQQRGRRI--------LLSPVIVAVTTGVVIAMIAPLQKMLFDNPRAVLRPLGAALQTVGQPEVAVSTLVMAGSLAHVPNAAVASTTARNYRILAGFLHVVCRLIVVPAVGFATFWVARTQSMVTGENRLMHFILLIEFAMPSAAFVIVSLNQLRLPATAGFMARMYLWQYVASMFTVAAWTAL 1167
            W ++ +R + I        + +P  +A   G +I + +P++K+L  N  A LR + ++   +G+  +   TL+M G+L+   N +  S T     ++ G + V  R I++P +G      A    ++  EN+L HF+LL++FA+P A  V     + +L      +  + LW YV + FT+  W+ L
Sbjct:  220 WKKIMRRMKSISEKVDLKKVFAPTAIAAIVGFIIGIASPIRKLLIGN-EAPLRVVDSSAYILGETAIPCMTLIMGGNLSRGLNGSDVSRT-----VIIGIIGV--RNILLPLIGIGVVKAALHLGLIASENKLYHFVLLLQFAVPPAISVGTMTQKFQLGQCETSV--IMLWTYVIAAFTLTIWSTL 396          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JAX8_9PHAE8.700e-16062.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FW26_ECTSI5.650e-14358.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J918_9PHAE2.060e-8034.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J8G0_9PHAE1.500e-7735.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FW24_ECTSI8.910e-4053.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z6D5_9STRA4.800e-2826.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C7K1_9STRA2.450e-1632.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6A2YYK9_HIBSY7.140e-927.27Auxin efflux carrier family protein isoform 1 n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig2contigP-fluviatile_contig2:2501802..2505305 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score469.2
Seed ortholog evalue2e-129
Seed eggNOG ortholog2880.D7FW25
EggNOG OGs2E8NN@1,2SF47@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons6
Model size1188
Cds size1188
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig2.3937.1prot_P-fluviatile_contig2.3937.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig2 2501802..2505305 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815853.4056337-CDS-P-fluviatile_contig2:2501801..25019391622815853.4056337-CDS-P-fluviatile_contig2:2501801..2501939Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 2501802..2501939 -
1693563548.1595511-CDS-P-fluviatile_contig2:2501801..25019391693563548.1595511-CDS-P-fluviatile_contig2:2501801..2501939Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 2501802..2501939 -
1622815853.4173954-CDS-P-fluviatile_contig2:2502199..25023161622815853.4173954-CDS-P-fluviatile_contig2:2502199..2502316Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 2502200..2502316 -
1693563548.1727214-CDS-P-fluviatile_contig2:2502199..25023161693563548.1727214-CDS-P-fluviatile_contig2:2502199..2502316Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 2502200..2502316 -
1622815853.4270058-CDS-P-fluviatile_contig2:2503250..25033971622815853.4270058-CDS-P-fluviatile_contig2:2503250..2503397Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 2503251..2503397 -
1693563548.180348-CDS-P-fluviatile_contig2:2503250..25033971693563548.180348-CDS-P-fluviatile_contig2:2503250..2503397Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 2503251..2503397 -
1622815853.4361682-CDS-P-fluviatile_contig2:2503680..25041421622815853.4361682-CDS-P-fluviatile_contig2:2503680..2504142Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 2503681..2504142 -
1693563548.4038212-CDS-P-fluviatile_contig2:2503680..25041421693563548.4038212-CDS-P-fluviatile_contig2:2503680..2504142Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 2503681..2504142 -
1622815853.4462087-CDS-P-fluviatile_contig2:2504540..25046161622815853.4462087-CDS-P-fluviatile_contig2:2504540..2504616Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 2504541..2504616 -
1693563548.4118536-CDS-P-fluviatile_contig2:2504540..25046161693563548.4118536-CDS-P-fluviatile_contig2:2504540..2504616Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 2504541..2504616 -
1622815853.4587672-CDS-P-fluviatile_contig2:2505057..25053051622815853.4587672-CDS-P-fluviatile_contig2:2505057..2505305Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 2505058..2505305 -
1693563548.419787-CDS-P-fluviatile_contig2:2505057..25053051693563548.419787-CDS-P-fluviatile_contig2:2505057..2505305Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 2505058..2505305 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig2.3937.1

>prot_P-fluviatile_contig2.3937.1 ID=prot_P-fluviatile_contig2.3937.1|Name=mRNA_P-fluviatile_contig2.3937.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=396bp
MVSSTGATLNRAVLRDSWQLLAAASFSIGIAAAIAWSAGRVCFRRPEDRR
AFRPVGLAVTFANTAGFPLLLMGALCEQDYVKSDFGDDAVECFTQATGMI
FIYVVVWQAFFFGWGFFALGHDDTLERKLTGEPPKSQILRTPRERISSRS
DPSSELPQQVENNSRPNGISDLGGERATAGGNGAEVIDVDESTTGNSGGI
SKGDRGGGKGWAELQQRGRRILLSPVIVAVTTGVVIAMIAPLQKMLFDNP
RAVLRPLGAALQTVGQPEVAVSTLVMAGSLAHVPNAAVASTTARNYRILA
GFLHVVCRLIVVPAVGFATFWVARTQSMVTGENRLMHFILLIEFAMPSAA
FVIVSLNQLRLPATAGFMARMYLWQYVASMFTVAAWTALALHLVY*
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mRNA from alignment at P-fluviatile_contig2:2501802..2505305-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig2.3937.1 ID=mRNA_P-fluviatile_contig2.3937.1|Name=mRNA_P-fluviatile_contig2.3937.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3504bp|location=Sequence derived from alignment at P-fluviatile_contig2:2501802..2505305- (Porterinema fluviatile SAG_2381)
ATGGTTTCCAGCACCGGAGCCACCTTGAATAGGGCGGTGCTGAGAGATTC GTGGCAGCTGTTGGCAGCAGCGAGCTTCTCGATCGGAATCGCGGCGGCCA TTGCTTGGTCCGCCGGTCGTGTGTGTTTTCGCCGGCCTGAAGATCGGCGC GCTTTTCGACCCGTCGGTCTCGCCGTCACGTTCGCGAATACTGCGGGGTT CCCGCTCTTGCTGATGGGCGCCCTGTGCGAGCAGGACTACGTCAAGAGGT GCTCCTTGAAGTTGGCTCCATGCACTTTCCCGTCCCACACGCACGCACGT GCCGCGAGCGTTTTGTCCTATGTGTTTGCCGCCGGCATATAAAAATGTGC AGTTTTTACTCTCGGACAGGAAGCGCAAGTTTAATCGATACGCACGCATC CATGCACAGGAATAGCTTCGGAGGATTTCTGAGCTGCTGCATGACGTTTT CCTCTTAAACGGGCAATGAGTGGGTCGATCCACAACAAACTCACATGCCT CGAGGATCTGCCGTACGGAAAGCGTAGGATTTCAAGCGTCCTCTGAGAAT CAGCTACAAAAATCATGACGAGACACACGTCGTTGTTTCGGGTTTACATT CTTCATGCCCTCCTCGAGTTTCGCGCTTCGCGATTACACTTCAGCCTTCA TGTTTACATGTTAACCTCTTACACGCCGGTTGGCTCCAGTGACTTTGGTG ATGACGCTGTGGAATGCTTCACCCAAGCAACAGGCATGATCTTCATCTAC GTGGTCGTCTGGCAGGTGCGTGGACAACATGTAGGCGGCGCTTTTACGAG GAGCCATCAGAGTGGAAACAGAGAGTGTAGTGGAAGATGCGGCGCAGAAT AGGAGTGAGCCGGGAAGCACTCTAGGACAAAAAAGTAGGCTCTTACTGCC GAAAGCGCTTGCATTTTTTTTTTCCTTCCGGCAATACAGCTCGGAACTCT CTGCAGTGAGAGCGCGTTTCTTGAAATCAGAACAGGTTGTCGTAGAACCC CTGTACAGGAACTCGTCCAACAAAATGCTCTCACCATCCCCGTGTTATCC CTCAACACCGAACGCAGGAGCACTTTTCGGCGCGCAGCGACTGAAATACC GGAAATAGTCGCTTGAAAACCCTCTCAAAGTCACGCCCTTTCTGCACGCC CTTTCGCATTCAGGCCTTTTTCTTCGGATGGGGTTTCTTCGCTCTTGGGC ATGACGACACCCTAGAGCGTAAGCTAACTGGAGAGCCGCCAAAGTCTCAA ATACTACGCACACCAAGGGAAAGGATTTCGTCGCGGAGCGACCCTTCCAG CGAGTTGCCGCAGCAGGTGGAGAATAACAGCCGTCCTAATGGTATTAGCG ACCTGGGTGGGGAAAGGGCAACAGCGGGAGGCAATGGTGCAGAAGTAATC GACGTTGACGAAAGCACGACGGGAAACAGCGGCGGCATCAGCAAGGGTGA CCGTGGTGGTGGAAAGGGCTGGGCGGAGCTGCAGCAGCGTGGTAGACGCA TTCTTCTTTCGCCCGTAATTGTCGCGGTCACGACTGGCGTGGTCATTGCC ATGATCGCGCCCTTGCAGAAGATGCTGTTCGATAACCCGCGAGCGGTGCT GCGGCCGTTGGGCGCGGCTCTTCAGGTGAACGTCGCTCGGGAGATGGGCC ACCCTCAATTCAGGGGGGTTACCGTTAGCCGACGAATGGAGTGGCTGAAC TGATCGTCCGCGGTCTTTTTGACCTTTCGAGCTGAGCCCATAGCACCTAC TTCCCGAGGGAGATGAGGCGCCATGAAGCACCAATATATTGAAGTGCTCG ACCCTGATCCCTTCGCCGGTAACGCCTCTCCCTCTTCTTTTTCTTGTTGA ATGTTAACGCCCTCCGACGCTGCTGCTCCGTCTGTCTGCCTCGATTCCGA CCCAACAGACTGTGGGCCAGCCTGAAGTAGCTGTGTCGACGCTGGTGATG GCTGGAAGCCTGGCACATGTTCCCAACGCGGCGGTAGCGTCAACAACGGC ACGTAACTACCGAATCCTGGCTGGTTTTCTGCACGTTGTGTGTCGCCTTA TCGTGGTGAGTCTCGGTGCTAAATTCCCGTGTCGCAACGCGCGTGGACCC GTAGAGTCGAGAACAATCTTTGGTTGTGACTTTTTCTGTCCCATCATTCA TTGTCTGTTTGACGAAGTTTCGGCTACGCTGTCAAAAGGCGGCAATTATA GTAATCGGTGGACACCGGAGGAAACAAAGCTGTGGTAGGGCACACAGGGT GGCGATCCAATCCAAGGAAAAAAAAAGGTGTTAATCATTCATTTTGGTCC TTTCTGCTGAAAAGGTAGGTTGTACCTCGACAGATGTTTGGGAGGTAGGT ACCAGTATCAGGGTATGGCCTCCACATCACCACCCCCTTTATTGAGGCTT CTTGTTTGCTTGGCAAAAAGCCTTCTAAGGGTAACCGGAACCCGTGGTGT GGAGACCATGCCCTGATAAGGGTACCTACATCCCAAACACCTTTCGAGGT ACAAGCCACCTTGTCCAAAATGGCGTCAACGAAGAGATCTGTGGAAGTTA AGCGGCGTCGGGCCAGACCAATACTACGGTGGGGGGCCCGTAGGTAGAGC CGCCGAAGAACGTTCGTAACCATGTTCTTAACGAACGTTCATACAACGCA CAGAACGCACAGATTCTCAGAACTACCTTCTGATAAATCGTGGCGGATGG ACGTGGGACACCCATCATTAACCACGCGATGAAGATGTTGGAAACAATGG TTGTTGACTTGCCGCCAGCCGGTCGGGTTCCGGTTAAACTTAGAAGGCTT CTTGCCTAGCAAACAAGTAGCCTCAATAAAGGGGAGGGTGGTGTGGAGGC CATACCCTGATAAGGGTACCTACCTCCCAAACACCTGTCGAGGTACAAAC CACCTTTTCCACATTTCGGCCTATCTACACGAATGGTGCGAGACCTCTTT CCCTCGCCCAATGCTTGGTCCACACGTCCTTAAACACAGGTTCCTGCTGT AGGGTTCGCCACTTTTTGGGTGGCGAGGACGCAAAGCATGGTGACGGGAG AGAACCGGTTGATGCACTTCATCCTTCTCATCGAGTTTGCCATGCCTTCG GCAGCGGTAAGAGTCCAGGGACGAGGCTGTCAAATTTTGCATAGTAGATT TGATTCACTCCGTATCTCGGTGATTTGAGAGTGAAGGCGTACCCCCACGA TCTCTGTGCTACAAAAACTGTTCTATTTTTGTAAGTACTATGATTCACAC TATCAGTCCGAGGCAGAAGATTGTGTTCATCAGCTGGCATGTCTTCATAC ATCTGTCGCATCGACGGCTGATTTCCATCTTCAATGTATTCGGCTATGTC TGCATCTCCTTTGCAGTTCGTCATTGTGTCCCTGAACCAACTGCGGCTGC CAGCGACCGCCGGCTTCATGGCTCGGATGTACCTCTGGCAGTACGTGGCT TCAATGTTCACGGTCGCTGCCTGGACAGCGTTGGCCTTGCATCTTGTTTA CTAA
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Coding sequence (CDS) from alignment at P-fluviatile_contig2:2501802..2505305-

>mRNA_P-fluviatile_contig2.3937.1 ID=mRNA_P-fluviatile_contig2.3937.1|Name=mRNA_P-fluviatile_contig2.3937.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2376bp|location=Sequence derived from alignment at P-fluviatile_contig2:2501802..2505305- (Porterinema fluviatile SAG_2381)
ATGGTTTCCAGCACCGGAGCCACCTTGAATAGGGCGGTGCTGAGAGATTC
GTGGCAGCTGTTGGCAGCAGCGAGCTTCTCGATCGGAATCGCGGCGGCCA
TTGCTTGGTCCGCCGGTCGTGTGTGTTTTCGCCGGCCTGAAGATCGGCGC
GCTTTTCGACCCGTCGGTCTCGCCGTCACGTTCGCGAATACTGCGGGGTT
CCCGCTCTTGCTGATGGGCGCCCTGTGCGAGCAGGACTACGTCAAGAGAT
GGTTTCCAGCACCGGAGCCACCTTGAATAGGGCGGTGCTGAGAGATTCGT
GGCAGCTGTTGGCAGCAGCGAGCTTCTCGATCGGAATCGCGGCGGCCATT
GCTTGGTCCGCCGGTCGTGTGTGTTTTCGCCGGCCTGAAGATCGGCGCGC
TTTTCGACCCGTCGGTCTCGCCGTCACGTTCGCGAATACTGCGGGGTTCC
CGCTCTTGCTGATGGGCGCCCTGTGCGAGCAGGACTACGTCAAGAGTGAC
TTTGGTGATGACGCTGTGGAATGCTTCACCCAAGCAACAGGCATGATCTT
CATCTACGTGGTCGTCTGGCAGTGACTTTGGTGATGACGCTGTGGAATGC
TTCACCCAAGCAACAGGCATGATCTTCATCTACGTGGTCGTCTGGCAGGC
CTTTTTCTTCGGATGGGGTTTCTTCGCTCTTGGGCATGACGACACCCTAG
AGCGTAAGCTAACTGGAGAGCCGCCAAAGTCTCAAATACTACGCACACCA
AGGGAAAGGATTTCGTCGCGGAGCGACCCTTCCAGCGAGTTGCCGCAGCA
GGTGGAGAATAACAGCCGTCCTAATGGTATTAGCGACCTGGGTGGGGAAA
GGGCAACAGCGGGAGGCAATGGTGCAGAAGTAATCGACGTTGACGAAAGC
ACGACGGGAAACAGCGGCGGCATCAGCAAGGGTGACCGTGGTGGTGGAAA
GGGCTGGGCGGAGCTGCAGCAGCGTGGTAGACGCATTCTTCTTTCGCCCG
TAATTGTCGCGGTCACGACTGGCGTGGTCATTGCCATGATCGCGCCCTTG
CAGAAGATGCTGTTCGATAACCCGCGAGCGGTGCTGCGGCCGTTGGGCGC
GGCTCTTCAGGCCTTTTTCTTCGGATGGGGTTTCTTCGCTCTTGGGCATG
ACGACACCCTAGAGCGTAAGCTAACTGGAGAGCCGCCAAAGTCTCAAATA
CTACGCACACCAAGGGAAAGGATTTCGTCGCGGAGCGACCCTTCCAGCGA
GTTGCCGCAGCAGGTGGAGAATAACAGCCGTCCTAATGGTATTAGCGACC
TGGGTGGGGAAAGGGCAACAGCGGGAGGCAATGGTGCAGAAGTAATCGAC
GTTGACGAAAGCACGACGGGAAACAGCGGCGGCATCAGCAAGGGTGACCG
TGGTGGTGGAAAGGGCTGGGCGGAGCTGCAGCAGCGTGGTAGACGCATTC
TTCTTTCGCCCGTAATTGTCGCGGTCACGACTGGCGTGGTCATTGCCATG
ATCGCGCCCTTGCAGAAGATGCTGTTCGATAACCCGCGAGCGGTGCTGCG
GCCGTTGGGCGCGGCTCTTCAGACTGTGGGCCAGCCTGAAGTAGCTGTGT
CGACGCTGGTGATGGCTGGAAGCCTGGCACATGTTCCCAACGCGGCGGTA
GCGTCAACAACGGCACGTAACTACCGAATCCTGGCTGGTTTTCTGCACGT
TGTGTGTCGCCTTATCGTGACTGTGGGCCAGCCTGAAGTAGCTGTGTCGA
CGCTGGTGATGGCTGGAAGCCTGGCACATGTTCCCAACGCGGCGGTAGCG
TCAACAACGGCACGTAACTACCGAATCCTGGCTGGTTTTCTGCACGTTGT
GTGTCGCCTTATCGTGGTTCCTGCTGTAGGGTTCGCCACTTTTTGGGTGG
CGAGGACGCAAAGCATGGTGACGGGAGAGAACCGGTTGATGCACTTCATC
CTTCTCATCGAGTTTGCCATGCCTTCGGCAGCGGTTCCTGCTGTAGGGTT
CGCCACTTTTTGGGTGGCGAGGACGCAAAGCATGGTGACGGGAGAGAACC
GGTTGATGCACTTCATCCTTCTCATCGAGTTTGCCATGCCTTCGGCAGCG
TTCGTCATTGTGTCCCTGAACCAACTGCGGCTGCCAGCGACCGCCGGCTT
CATGGCTCGGATGTACCTCTGGCAGTACGTGGCTTCAATGTTCACGGTCG
CTGCCTGGACAGCGTTGGCCTTGCATCTTGTTTACTAATTCGTCATTGTG
TCCCTGAACCAACTGCGGCTGCCAGCGACCGCCGGCTTCATGGCTCGGAT
GTACCTCTGGCAGTACGTGGCTTCAATGTTCACGGTCGCTGCCTGGACAG
CGTTGGCCTTGCATCTTGTTTACTAA
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