mRNA_P-fluviatile_contig2.3936.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig2.3936.1 vs. uniprot
Match: A0A6H5J832_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J832_9PHAE) HSP 1 Score: 482 bits (1240), Expect = 3.750e-161 Identity = 284/451 (62.97%), Postives = 327/451 (72.51%), Query Frame = 1
Query: 55 MEHPGLRSLELSLCLCLLYSGYETARASSLTLFNSNYSAYSAGVGGALTTTLSFVLSLASLQLYGRGEETLGGRWTLVLSAGGCCGAFLGFAMVSF-DAQVSLMKVAGLFAVRETYVAWIGTQIWSMLSSDLKRAGPEESRRWFCIIQGVSCICSAVSGTAAGRLATAGGQGVLLLATALSLGIITAT-VAVLPSSALGAGTSEGGESSDSGEKRREAHVLNKNGSLLSVLRASVSIFRGSPLLTALLAEAVVCQVLTATLNMSFNKAIRQSMASGLADEKHAGARAAGFVGKSFALIGLISGALQLLVMPWVMVRVDPSLLLRALPVVAGCGFLVTFVSPGFRTATAAFALTKTLEYSVRGTALELIFQLMPDRERLLGTEAISLIGVRIGRTTAHIALYLCSALLGGAPPQRALMAGAIASAAVWGVTLRQVEMLVKNGNSYRKRSPPP 1401
M HPG L L CLCLLYSGYE ARASSL LFN + AG+ GALT+ +SFVLS+A L +YG G E LGG+WTLV+SA GCC FL FA F DA VS V GL+A RE YVA I TQ+W +LS+ LK+ G ESRRWFCIIQGVSCICSA SG AAGRLATAGGQ LLLA ALSLG IT T VA+ P A G G + +G+K+ + +L SVLR+S S+FR SPLL ALLAEA VCQVL ATLN+SFN+AIRQ + A + GA AAGFVG SFA+IGL+SG LQL+VMPW MVRV+PSLLL+ LPVVAG GFLVTFVSPGFRTAT AF++TK LEYSVRGT LEL++Q M D ER LG EAI+ +GVRIGRTTA + LYLCSA+LGG PPQRALM A + WG T+R+VE L + G SPPP
Sbjct: 1 MRHPGGHFLALGWCLCLLYSGYELARASSLALFNKS----DAGLSGALTSAVSFVLSVAMLGVYGVGAEVLGGKWTLVVSASGCCVVFLAFAFACFGDADVSRTVVCGLYAFREMYVALIATQVWELLSAALKQRGERESRRWFCIIQGVSCICSAFSGVAAGRLATAGGQAYLLLAAALSLGTITVTAVALTPVKAGGWGFEK--VEGKTGKKKSDHGML-------SVLRSSASLFRQSPLLAALLAEATVCQVLVATLNLSFNEAIRQGLPREEASGE-TGAGAAGFVGNSFAVIGLVSGILQLVVMPWAMVRVNPSLLLKTLPVVAGGGFLVTFVSPGFRTATVAFSVTKILEYSVRGTVLELVYQAMADDERRLGKEAIATVGVRIGRTTAQVLLYLCSAVLGGTPPQRALMGVAFVLSIAWGATIRKVEALARRGGGPLP-SPPP 436
BLAST of mRNA_P-fluviatile_contig2.3936.1 vs. uniprot
Match: D7FW23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW23_ECTSI) HSP 1 Score: 228 bits (582), Expect = 2.890e-67 Identity = 125/192 (65.10%), Postives = 139/192 (72.40%), Query Frame = 1
Query: 55 MEHPGLRSLELSLCLCLLYSGYETARASSLTLFNSNYSAYSAGVGGALTTTLSFVLSLASLQLYGRGEETLGGRWTLVLSAGGCCGAFLGFAMVSF-DAQVSLMKVAGLFAVRETYVAWIGTQIWSMLSSDLKRAGPEESRRWFCIIQGVSCICSAVSGTAAGRLATAGGQGVLLLATALSLGIITATVAVL 627
M HPG SL L CLCLLYSGYE ARASSL LFN + AG+ GALT+T+SFVLS+A L +YG G E LGG+WTLV+SAGGCC FL FA F DA + GL+A RE YVA I TQ+W +LS+ LK+ G ESRRWFCIIQGVSCICSA SG AAGRLATAGGQ LLLA ALSLG IT T L
Sbjct: 1 MRHPGGHSLALGWCLCLLYSGYELARASSLALFNKS----DAGLSGALTSTVSFVLSVAMLGVYGVGAEALGGKWTLVVSAGGCCVVFLAFAFACFGDAVFGRTVICGLYAFREMYVALIATQVWGLLSAALKQRGERESRRWFCIIQGVSCICSAFSGVAAGRLATAGGQAYLLLAAALSLGTITVTAVAL 188
BLAST of mRNA_P-fluviatile_contig2.3936.1 vs. uniprot
Match: A0A7S1BRI7_9STRA (ADP,ATP carrier protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BRI7_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.400e-27 Identity = 136/458 (29.69%), Postives = 213/458 (46.51%), Query Frame = 1
Query: 85 LSLCLCLLYSGYETARASSLTLFNSN---------------YSAYSAGVGGALTTTLSFVLSLASLQLYGRGEETLGGRWTLVLSAGGCCGAFLGFAMVSFDAQVSLMK------------VAGLFAVRETYVAWIGTQIWSMLSSDLKRAGPEESRRWFCIIQGVSCICSAVSGTAAGRLATAGGQGVLLLATALSLGIITATVAVLPSSALGAGTSEGGESSDSGEKRREAHVLNKNGSLLSVLRASVSIFRGSPLLTALLAEAVVCQVLTATLNMSFNKAIRQSMASGLADEKHAGARAAGFVGKSFALIGLISGALQLLVMPWVMVRVDPSLLLRALPVVAGCGFLVTFVS--PGFRTATAAFALTKTLEYSVRGTALELIFQLMPDRERLLGTEAISLIGVRIGRTTAHIALY-LCSALLGGAPPQRALMAGAIASAAVWGVTLRQVEMLVKN 1368
++L + L Y GYE AR++++ LF ++ + SA +G A+ L L YGR + G R L ++ G C A L + A K + LF RE+YV +GTQ WS + S LK PEE R++F I G S + +AV GT L G G LL+ A +T +VL + A GG D E++ ++ ++ + A+ +F+ P+L AL E + CQ L++ LN+ F + + +S+ + G RA G+ GK +A I ++S LQ ++P VM VDP+++ RA+P V VS P A+F + K+LEYS+RG E+++ + R LG E I + R+G++ + L L + + GG R L A+ A W VT ++ LV +
Sbjct: 66 MALSMALHYLGYEFARSATVALFTASPVPPSPGGSTPSLPGFGKSSAAIGAAMAAVCPTAAIL--LAWYGRVLDFYGPRGALRVT-GTSCAAALALGGAAVHAMAGTTKFLTLRPRATRAFLFALFVFRESYVQLLGTQHWSFMGSVLK---PEEGRKFFAPIAGASSVAAAVGGTFTRGLVGGVGLGGLLVCAA-----VTGGGSVLAADAAYRLAEHGGF--DPREEKAKSKGCKEHTQKGAWGSATSLLFKRVPVLGALYRETLACQSLSSVLNVMFFRRLTESVPND-------GERA-GWTGKFYASINVVSCVLQFGILPAVMKYVDPAMMWRAMPTVMMTFATAMCVSKDPSLHLVGASFLVMKSLEYSIRGVVNEMVYVPLDFESRYLGKEVIGVFAYRLGKSGTSLLLSGLATTVGGGDLGLRDLGIVTAAATASWTVTAYRLANLVSS 502
BLAST of mRNA_P-fluviatile_contig2.3936.1 vs. uniprot
Match: B8CBQ4_THAPS (ADP,ATP carrier protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBQ4_THAPS) HSP 1 Score: 106 bits (265), Expect = 1.810e-20 Identity = 123/433 (28.41%), Postives = 197/433 (45.50%), Query Frame = 1
Query: 70 LRSLELSLCLCLLYSGYETARASSLTLFNSNYSAYSAGVGGALTTTLSFV--LSLASLQLYGRGEETLGGRWTLVLSAGGCCGAFLGFAMVSF---------DAQVSLMK---VAGLFAVRETYVAWIGTQIWSMLSSDLKRAGPEESRRWFCIIQGVSCICSAVSGTAAGRLATAGG-QGVLLLATALSLGIITATVAVLPSSALGAGTSEGGESSDSGEKRREAHVLN-KNG------SLLSVLRASVSIFRGSPLLTALLAEAVVCQVLTATLNMSFNKAIRQSMASGLADEKHAGARAAGFVGKSFALIGLISGALQLLVMPWVMVRVDPSLLLRALPVVA---GCGFL---VTFVS----PGFRTATAAFALTKTLEYSVRGTALELIFQLMPDRERLLGTEAISLIGVRIGRTTAHIALYLCSALLG 1272
L +L ++ C+ L Y Y AR +++TLF S+ + V A ++F+ +S L YG + G L + GC L A V D ++ M V LF RE+YV I +Q WS +SS L P +S RWF I G++ + SAV+ G+L+ G GVL +A G++ + A G +D +++E L KNG +L++ R +F P L AL E + CQ L+ LN+ + + + D + AG ++GK FA I ++S LQ ++P ++PS L + +P+V C +T +S P +AF + KT+E+SVR E+++ + R LG E I ++G R G++ A +AL ++ G
Sbjct: 112 LATLSMATCMSLHYLAYSLARPATMTLFTSSRLGFGNSVS-AYPFAMTFISPVSFVLLLFYGSVLNSCGPLMALKYTTIGCS-VILTLASVVIAKLDPYVDTDPNIATMTKYLVGTLFIFRESYVQLITSQHWSFISSVLT---PSQSSRWFAPISGLTSVTSAVAAMGVGKLSELWGLSGVLGMA-----GLVLGGSVIFGEFAYDVAEKNGFNPADEHFRKKEQTKLRAKNGGEDQHDNLIAKAR---DVFARVPTLWALFCEILACQGLSTLLNVLCVTKVSEVIPD---DTERAG-----WMGKFFATINVLSCVLQFGILPATSSYIEPSALWKGMPMVMMIMTCLLAFPKLTGISRSSDPSLNLIASAFLVMKTMEFSVRRMLDEMVYVPLDYESRFLGKEVIGVLGYRFGKSAASLALSALTSSFG 523
BLAST of mRNA_P-fluviatile_contig2.3936.1 vs. uniprot
Match: A0A7S1Z6F4_9STRA (ADP,ATP carrier protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z6F4_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 8.630e-18 Identity = 104/410 (25.37%), Postives = 183/410 (44.63%), Query Frame = 1
Query: 85 LSLCLCLLYSGYETARASSLTLFNSNYSAYSAGVGG------ALTTTLSFVLSLASLQLYGRG-EETLGGRW---TLVLSAGGCCGAFLGFAMVSFDAQVSLMKVAGLFAVRETYVAWIGTQIWSMLSSDLKRAGPEESRRWFCIIQGVSCICSAVSGTAAGRLATAGGQ--GVLLLATALSLGIITATVAVLPSSALGAGTSEGGESSDSGEKRREAHVLNKNGSLLSVLRASVSIFRGSPLLTALLAEAVVCQVLTATLNMSFNKAIRQSMASGLADEKHAGARAAGFVGKSFALIGLISGALQLLVMPWVMVRVDPSLLLRALPVVAGCGFLVTFV--SPGFRTATAAFALTKTLEYSVRGTALELIFQLMPDRERLLGTEAISLIGVRIGRTTAHIALYLCSALLG 1272
+++ + Y Y AR ++L LF S+ ++ G ++ T +L + + L +G + L G +LVLS A+L + + + + V LF RE+YV + +Q WS + S L P + WF I G++ + SA +G + + G V + L I+ A A S G + + E ++ +N ++ + ++F P L AL E + Q L+ LN+ F + ++ D+ AG ++GK +ALI ++S LQ V+P M +++PSLL R +P++ V SP + A L KTLE+S+R E+++ + R +G E I + G R G++ +AL +++ G
Sbjct: 100 MAVAMACHYLSYSLARPTTLALFTSSTVGFAHSPGAFPLAMACISPTSLLLLFIYTNMLDAKGPRKALRGTTLMCSLVLSTAAGLVAYLSKSDSTSNTWMVRTVVGALFVYRESYVQLLTSQYWSFICSTLT---PSQGSTWFAPISGLTSVTSATAGLLVKTVIDSVGLTGAVAMAGVVLLFSILAAEQAYAISETYGFNPAAEHFAKKKKENESTTPIVKQN-----MISKATALFARVPTLWALFCEILAAQGLSTLLNVCFVAKLSTAVPE---DDMRAG-----WMGKFYALINVVSCCLQFGVLPQAMSKIEPSLLWRVMPIIMATYLFYQSVQPSPSLYLVSGALFLFKTLEFSIRRMLDEMVYVPLDFESRFVGKEVIGVFGYRFGKSGMSLALSGLTSIFG 493
BLAST of mRNA_P-fluviatile_contig2.3936.1 vs. uniprot
Match: A0A7S2S229_9STRA (ADP,ATP carrier protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S229_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 7.280e-17 Identity = 97/315 (30.79%), Postives = 149/315 (47.30%), Query Frame = 1
Query: 391 ETYVAWIGTQIWSMLSSDLKRAGPEESRRWFCIIQGVSCICSAVSG-TAAGRLATAGGQGVLLLATALSLGIITATVAVLPSSALGAGTSEGGESSDSGEKRREAH-----VLNKNGSLLS-------------VLRASVSIFRGSPLLTALLAEAVVCQVLTATLNMSFNKAIRQSMASGLADEKHAGARAAGFVGKSFALIGLISGALQLLVMPWVMVRVDPSLLLRALPVV-AGCGFLVTF-VSPGFRTATAAFALTKTLEYSVRGTALELIFQLMPDRERLLGTEAISLIGVRIGRTTAHIALYLCSALLG 1272
E YV + +Q WS +SS L P +S +WF I G++ I SAV+G T A + G GVL+ S G++ +T A G +D KR E+ NK + S +L + ++F +P+L +L E + CQ L+ LN+ F + QSM ++ AG++GK FA I +IS LQ ++P +M V+PS L R +P++ G L V P + +F KT+E+SVR EL++ + R LG E I + G R G++ +AL ++L G
Sbjct: 1 EAYVQLLTSQYWSFMSSVLT---PTQSSKWFAPISGLTSITSAVAGWTMALCVEKVGLNGVLI-----SSGLLLSTSLFFTERAYTLSEEHGFNPADELIKRNESKQQSPAAKNKGKKIESNDNETSKPEEEEGMLSKASNLFGRAPVLKSLFMEILACQGLSTLLNVLFVTKLSQSMPDD--------SQRAGWMGKFFATINVISCVLQFGILPPLMSVVEPSTLWRLMPLIMVGLTSLQALDVDPSLLVISGSFMAMKTMEFSVRRMLDELVYVPLDFDSRYLGKEIIGVFGYRFGKSGMSLALSGLTSLFG 299
BLAST of mRNA_P-fluviatile_contig2.3936.1 vs. uniprot
Match: K0RUJ5_THAOC (ADP,ATP carrier protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RUJ5_THAOC) HSP 1 Score: 94.4 bits (233), Expect = 8.900e-17 Identity = 114/417 (27.34%), Postives = 183/417 (43.88%), Query Frame = 1
Query: 94 CLCLLYSGYETARASSLTLFNSNYSAYSAGVGGALTTTLSFV--LSLASLQLYGRGEETLGGRWTLVLSAGGCCGAFLGFA---------MVSFDAQVS-LMK--VAGLFAVRETYVAWIGTQIWSMLSSDLKRAGPEESRRWFCIIQGVSCICSAVSGTAAGRLATAGGQGVLLLATALSLGIITATVAVLPSSALGAGTSEGGESSDSGEKRREAHV--LNKNGSLLSVLRASVSIFRGSPLLTALLAEAVVCQVLTATLNMSFNKAIRQSMASGLADEKHAGARAAGFVGKSFALIGLISGALQLLVMPWVMVRVDPSLLLRALPVVA-GCGFLVTFV-------SPGFRTATAAFALTKTLEYSVRGTALELIFQLMPDRERLLGTEAISLIGVRIGRTTAHIALYLCSALLG 1272
C+ L Y Y AR +++TLF S A A +++F+ +S L YG+ E G L + GC + LG A +V A+++ L+K V LF RE+YV I +Q WS +SS L P +S WF I G++ ++LG V+VL + E G + + KR++ L +N S++ + +F P L AL E + CQ L+ LN+ + + + D+K AG++GK FA I ++S LQ ++P +PS+L + +P+V G + F P R F + KT+E+SVR E+++ + R LG E I ++G R G++ A +AL ++ G
Sbjct: 9 CMSLHYLAYSLARPATMTLFTSASDLALAHPKSAYPFSMTFISPMSFMLLLFYGKILERNGPSMALKKTTVGCA-SLLGLASVVIAKLDPLVDDSARIATLVKYFVGVLFVFRESYVQLITSQHWSFISSVLT---PNQSSTWFAPISGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXIALG-----VSVLFGQLAYSIAEENGFNPEDEHKRKQTSTTKLVENSKEESLVSKARDVFARVPTLWALFCEILACQGLSTMLNVCCITKVSEV----IPDDKER----AGWMGKFFATINVLSCVLQFGILPATSSFTEPSMLWKGMPLVMLGMTCFLAFPRISGVSGEPTLRLVATTFLVMKTMEFSVRRMLDEMVYVPLDYESRYLGKEVIGVLGYRFGKSAASLALSALTSSFG 408
BLAST of mRNA_P-fluviatile_contig2.3936.1 vs. uniprot
Match: A0A7S1GKD8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKD8_CYCTE) HSP 1 Score: 82.4 bits (202), Expect = 7.160e-14 Identity = 58/176 (32.95%), Postives = 92/176 (52.27%), Query Frame = 1
Query: 733 SVLRASVSIFRGSPLLTALLAEAVVCQVLTATLNMSFNKAIRQSMASGLADEKHAGARAAGFVGKSFALIGLISGALQLLVMPWVMVRVDPSLLLRALPVV--AGCGFLVTFVSPGFRTATAAFALTKTLEYSVRGTALELIFQLMPDRERLLGTEAISLIGVRIGRTTAHIALYL 1254
SVL + +F+ P+L AL E +VCQ L++ L F +++S+ D+K AG + G +A++ +SG LQ++V+P + VDP L +PVV G F++ S A F KT+E+S+RG A E+++ + R LG E I L R G++ + L L
Sbjct: 38 SVLMRTKELFQREPILGALCLEVLVCQCLSSLLQFIFLWKVKESIVD---DQKRAG-----WTGNCYAIVNGVSGLLQVIVIPMTIKHVDPRRLWVFMPVVILVGALFMIREQSCSLHLAAPTFMAMKTMEFSIRGVANEMVYASLDYDSRFLGKEIIGLFANRFGKSLMAVGLSL 205
BLAST of mRNA_P-fluviatile_contig2.3936.1 vs. uniprot
Match: A0A7S1ZMJ9_TRICV (ADP,ATP carrier protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMJ9_TRICV) HSP 1 Score: 67.8 bits (164), Expect = 1.380e-8 Identity = 59/201 (29.35%), Postives = 102/201 (50.75%), Query Frame = 1
Query: 736 VLRASVSIFRGSPLLTALLAEAVVCQVLTATLNMSF-NKAIRQSMASGLADEKHAGARAAGFVGKSFALIGLISGALQLLVMPWVMVRVDPSLLLRALPVV--AGCGFLVTFVSPGFRTATAAFALTKTLEYSVRGTALELIFQLMPDRERLLGTEAISLIGVRIGRTTAHIALYLCSALLGGAPPQRALMAGAIASAAVW 1329
+++ + +F P+L +L E + CQ L+ LN+ + NK +++ + D++ AG+ GK FA+I L+SG LQ V+P +M ++P+ L RA+P++ A +L P F K +E+S R E+++ + R +G E I + G R G++ +AL ++ G R L A+AAVW
Sbjct: 82 MIKKASDLFSRVPVLKSLFVEILACQGLSTILNVCYVNK-----LSTTIEDDRER----AGWSGKFFAVINLVSGFLQFAVLPPLMSVIEPAALWRAMPLIMMAFTAYLGVDDDPTLVLVAGTFLAMKAMEFSARRMLDEMVYVPLDFDSRYVGKEVIGVFGYRFGKSGMSLALSALTSSDLGNLGLRQLTWLTTAAAAVW 273
BLAST of mRNA_P-fluviatile_contig2.3936.1 vs. uniprot
Match: B7G743_PHATC (ADP,ATP carrier protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G743_PHATC) HSP 1 Score: 68.9 bits (167), Expect = 1.780e-8 Identity = 102/415 (24.58%), Postives = 174/415 (41.93%), Query Frame = 1
Query: 85 LSLCLCLLYSGYETARASSLTLFNSNYSAYSAGVGGALTTTLSFVLSLASLQLYGRGEETLGGRWTLVLSAGGCCGAFLGFAMVSFDAQVS-LMKVAG----------LFAVRETYVAWIGTQIWSMLSSDLKRAGPEESRRWFCIIQGVSCICSAVSGTAAGRLATAGGQGVLLLATALSLGI----------ITATVAVLPSSALGAGTSEGGESSDSGEKRREAHVLNKNGSLLSVLRASVSIFRGSPLLTALLAEAVVCQVLTATLNMSFNKAIRQSMASGLADEKHAGARAAGFVGKSFALIGLISGALQLLVMPWVMVRVDPSLLLRALPVVAGCGFLVTFVSPGFRTA----TAAFALTKTLEYSVRGTALELIFQLMPDRERLLGTEAISLIGVRIGRTTAHIALYL 1254
+++ + L + GYE R S L LF S++ + L L ++ L Y R G R L S + L A + +++ L+ G F + +Y + TQ WS + S L P+E+ RWF ++ G S I ++G+A L G L+ ATA +L I + PS + A T+ S E L +G L + ++ +FR P L AL E + Q L L ++ + ++ + +A R+A + G+ +A++ S Q V P+V+ R++P + RALP +L++ G T+ A + K +Y+VR + +Q + R +G E I + G R G++ + LY+
Sbjct: 104 MAVAMALHFGGYEFLRNSCLALFTSSHVGFHNPAAFPLANALVSPFAVLLLLAYSRQLARYGPRIALCRST---AASVLWIATAATALRITPLLGTIGKPIGQALILLTFLFQSSYQYLLYTQHWSFVGSVLT---PDEASRWFPVLAGASSIVCTLTGSAIPYLVPRIGLLGLMAATAFTLTIALFSGDRAYHLAQRYGFDPSPPIQASTAPAPNVRQS-PNDTEPTSLATHGRL----QQAIDLFRRVPTLRALFLEVLSFQSLNTILQIALVRTLKTEIPDDVA-------RSA-YTGRLYAVVNACSALFQFGVFPFVLRRLEPRWIWRALP---WGSWLLSLRLVGRATSLTGVATAVVVAKVTDYAVRSVVYPMAYQPLDYHSRYVGKEVIGVFGSRTGKSGVSL-LYV 495 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig2.3936.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig2.3936.1 >prot_P-fluviatile_contig2.3936.1 ID=prot_P-fluviatile_contig2.3936.1|Name=mRNA_P-fluviatile_contig2.3936.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=469bp MEHPGLRSLELSLCLCLLYSGYETARASSLTLFNSNYSAYSAGVGGALTTback to top mRNA from alignment at P-fluviatile_contig2:2479004..2486163- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig2.3936.1 ID=mRNA_P-fluviatile_contig2.3936.1|Name=mRNA_P-fluviatile_contig2.3936.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7160bp|location=Sequence derived from alignment at P-fluviatile_contig2:2479004..2486163- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig2:2479004..2486163- >mRNA_P-fluviatile_contig2.3936.1 ID=mRNA_P-fluviatile_contig2.3936.1|Name=mRNA_P-fluviatile_contig2.3936.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2814bp|location=Sequence derived from alignment at P-fluviatile_contig2:2479004..2486163- (Porterinema fluviatile SAG_2381)back to top |