mRNA_P-fluviatile_contig2.3869.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig2.3869.1 vs. uniprot
Match: D7FVT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVT4_ECTSI) HSP 1 Score: 650 bits (1676), Expect = 1.390e-214 Identity = 514/1019 (50.44%), Postives = 599/1019 (58.78%), Query Frame = 1
Query: 34 REQIRSNTRENAAGFDGSGHGPAFDGWGAHARYFLARYPTDTRDFIAERLAVYGIRSLLSSHRQEDLTLDALISATDAADRDVLSLMREHAKGRQERRGERVATTASASAAAQRSRFASPGQQPQ--PRASGGALPAPREALRERGLVGNMNARLQAKGAAAAAGLRKRRHEVTARPDVLTRYPFVDDLGATQGGGVGAALHRATPTTPVQYLAKREIKRLAHEAFRELKASALGIRLSDLPCALQFLFFGDSASLLTAKGGGGGGCGEGSAGDDGVRSGGMRAKRRSAKDVHLVMALARECLPPTLAHAARDTSTLSSASSTQAGGVEAGWRRDVQNMFVSERRWMRVVAHVVRRLWGMDGMPERLAAAHSRR------------------QSTPAAATAAASPFGMDFQQPVWRPVGGGGGXXXKXXXXXXXXXXXXXXXXXXRFPGDDEDYDYHIESITGS-SFLGGLTADARSDTIGWGSAAAATAGGVTMDDIDDGDL-GAGEDG-------ALRAWEEEGEDWVGAGRSLSWAAPGQEGEEEGGEDAARGVNSTRPYDAPGRGSGPARSHHVDRRGAQHKQRQYGGSGAGGENWKIADARRSAVKDVVARRRLDEIDSGXXXXXXXXXX-----SSVRGEGASRR--DSAAAGLGSRSRGHTPGEHALDIAEAFLESSLMTRLAAGGDWFGSEDGEPASGDFSLVWEADEAVRVPPPAGRRRP-RAGGSSNGHPAARGYGRDRYGXXXXXXXXXXXXXXXXXTRRRKAYTGWLGDFGPAHTHTVREIAAEEXXXXXXXXXXXXXXXXXXXXXXXXXGRRGHGSAGLDDESVAL-----GNDGXXXXXXXXXXXXXXXXXXXXVLSEQGEEEDATSPEDL--GGGCSGGDAEAVAEPGMMAAERGGNPGIAAAXXXXXXXXXXXXXX---------VAPLDGGFDAYLQLASDGGPFLGGGRGAXXXXXXXXXFGVRVGGGSGGENPGSHSGETTPRWWTEHRPGTEEEDEVVG 2931
R R++ N GFDG GHG DGW AH RYFLARYP +TRD +A+RLA YGIRSLLSSHRQE+L+LDAL++ATDAADR+VLS MREHA+GR ++RG A+A RSR +SP +Q + PRA+GG AP E LRER ++ + N GAA A + ++RH V ARPDVLTRYPFVDDL ATQGGGVGA +H+ATPTTP+QYLAKREI+RLAHEAFRELKASALGIRLSDLPCALQFLFFGDSASLLT+KG R +RSAKDVHLVMALARECLPPTLAHAARDTSTLS+AS TQ G GW RD QNMFVSERRW++VVAHV+RRLW MDG PE +AA PA A A+PFGM+FQQPVW+PVGG + XXXXXXXXXXXXXXRF E E++T + SFLGGL AD+RSDT GWG +AA+ ++ D D G G G ALRAWEE EDWVGAGRS++ APG+E EE ARG + + AP RG G G++ +++Q GG+G G +IA ARRSAV+D VARRRLD +D G S V G+G R S AA S +RGHTPGEHALDIA AFLESSLMTRLA GGDWF EDG+ S S WE + AVR P G R+ R GG+ G + G G R RR+A+TGWLGDFGP HTHTVRE+A + XXXXXXXXXX R G+A D V+ G+DG G D ++ ED+ G G A G A G +PG + XXXXX VAPLDGG DAYLQLASDGG XXXXXXXXX G R G G GG +PG ++G T+ WW E R E D + G
Sbjct: 11 RAASRNHGYLNGGGFDGIGHGRGLDGWSAHVRYFLARYPPETRDLVAQRLASYGIRSLLSSHRQENLSLDALLAATDAADREVLSSMREHARGRHKQRG--------AAAPLCRSRTSSPQRQQRQHPRANGGNAAAPTEVLRER-VLADKNIDAGPPGAAGAVTVFRKRHVVAARPDVLTRYPFVDDLAATQGGGVGAVMHQATPTTPIQYLAKREIRRLAHEAFRELKASALGIRLSDLPCALQFLFFGDSASLLTSKGX--------XXXXXXXXXXXARGAKRSAKDVHLVMALARECLPPTLAHAARDTSTLSTAS-TQGGAEAGGWMRDGQNMFVSERRWIKVVAHVIRRLWDMDGRPEDVAAXXXXXXXXXXXXXXXXXXXXAGPSRKPATVAATAAPFGMEFQQPVWKPVGG-----RRGSVAXXXXXXXXXXXXXXRFLRGGE-----AENVTSAESFLGGLEADSRSDTTGWGGFSAASR--ISASDGDGGPYPGEGXXXXXXXXXEALRAWEE-AEDWVGAGRSIA-RAPGEEQEEH-----ARG-EAGGLFAAP-RGLGAVH-------GSRRRRKQSGGAGDAG---RIAGARRSAVRDTVARRRLDRLDRGSSLGDATQGFPADGRSGVSGDGDRDRGGSSLAAEWDSNARGHTPGEHALDIAGAFLESSLMTRLA-GGDWFDGEDGDQISAGSSAAWEPEGAVRGPLGGGPRQTHRPGGALRGRYDSGGGGGSR------SRNGLSRRDGGQRAGRREAHTGWLGDFGPVHTHTVREVAGDVEEEEEXXXXXXXXXXGDG---------RAWGTASRRDGGVSPPRDHGGSDGGTTSRQGSGGHAEEKGRGGVGEGGSG---DVSASEDVREGRGVDESTGAARGSDGGGATREGSDPGGGGSTSPNXXXXXDVGLGQGETGDFNVVAPLDGGLDAYLQLASDGGAXX---XXXXXXXXXXXXXGGREGPGLGGGSPGGYTGATSGSWWEEDRSALEGGDVIPG 958
BLAST of mRNA_P-fluviatile_contig2.3869.1 vs. uniprot
Match: A0A6H5JP21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP21_9PHAE) HSP 1 Score: 603 bits (1554), Expect = 1.390e-195 Identity = 494/1097 (45.03%), Postives = 570/1097 (51.96%), Query Frame = 1
Query: 1 MATVRWPSTAM---------REQIRSNTRENAAGFDGSGHGPAFDGWGAHARYFLARYPTDTRDFIAERLAVYGIRSLLSSHRQEDLTLDALISATDAADRDVLSLMREHAKGRQERRGERVATTASASAAAQRSRFASPGQQPQP--RASGGALPAPREALRERGLVGNMNARLQAKGAAAAAGLRKRRHEVTARPDVLTRYPFVDDLGATQGGGVGAALHRATPTTPVQYLAKREIKRLAHEAFRELKASALGIRLSDLPCALQFLFFGDSASLLTAKGGGGGGCGEGSAGDDGVRSGGMRAKRRSAKDVHLVMALARECLPPTLAHAARDTSTLSSASSTQAGGVEAGWRRDVQNMFVSERRWMRVVAHVVRRLWGMDGMPERLAA------------------AHSRRQSTPAAATAAASPFGMDFQQPVWRPVGGGGGXXXKXXXXXXXXXXXXXXXXXXRFPGDDEDYDYHIESITGSSFLGGLTADARSDTIGWGSAAAATAGGVTMDDIDDGD-----LGAGEDGALRAWEEEGEDWVGAGRSLSWAAPGQEGEEEGGEDA------ARGVNS--------TRPYDAPGRGSGPARSHHVDRRGAQHKQ-----------------------RQYGGSGAGGENW-----------------------KIADARRSAVKDVVARRRLDEIDSGXXXXXXXXXX-----SSVRGEGASRRD----SAAAGLGSRSRGHTPGEHALDIAEAFLESSLMTRLAAGGDWFGSEDGEPASGDFSLVWEADEAVRVPPPAGRRRPRAGGSSNGHPAARGYGRDRYGXXXXXXXXXXXXXXXXXTR--RRKAYTGWLGDFGPAHTHTVREIAA------EEXXXXXXXXXXXXXXXXXXXXXXXXXGRRGHG-----------SAGLDDESVALGNDGXXXXXXXXXXXXXXXXXXXXVLSEQGEEEDATSPEDLGGGCSGGDAEAVAEPGMMAAERGGNPGIAAAXXXXXXXXXXXXXXVAPLDGGFDAYLQLASDGGPFLGGGRGAXXXXXXXXXFGVRVGGGSGGENPGSHSGETTPRWWTEHRPGTEEEDEV 2925
MAT+R S AM R R++ N GFDG GHG DGW AH RYFLARYP +TRD +A+RLA YGIRSLLSSHRQE+L+L+AL++ATDAADR+VLS MREHA+GRQ++RG +AA RSR +S +Q + R +GG AP E LRER ++ + N AA A + ++RH V ARPDVLTRYPFVDDL ATQGGGVGA +H+ATPTTP+QYLAKREI+RLAHEAFRELKASALGIRLSDLPCALQFLFFGDSASLLT+KGGG RSAKDVHLVMALARECLPPTLAHAARDTSTLS+AS TQ GG EAGW RD QNMFVSERRW++VVAHV+RRLW MDG PE +AA A + PAA A A+PFGM+FQQPVW+ GGG ++ SF+GGL D+RSDT WG + + ++ D D G +G +D ALRAWEE EDWVGAGRS++ APG+E E+ E+A ARG+ + T+ A G G GA K+ R G GA E+ KIA ARRSAV+D VARRRLD +D G S V G+ RD S A S +RGHTPGEHALDIA AFLESSLMTRLA GGDWF ED E S S WE + AVRVP G R+ HP GR G R RR+A+TGWLGDFGPAHTHTVRE+A EE XXXXX R G S G +E G G XXX XXXXXX G +E + GG G E G N A VAPLDGG DAYLQL SDG G XXXXXXXXX R G G +PG ++G T+ WW E R E D V
Sbjct: 1 MATIRRSSAAMHGGQLHPKPRAASRNHGYHNGGGFDGVGHGRGLDGWSAHVRYFLARYPPETRDVVAQRLASYGIRSLLSSHRQENLSLEALLAATDAADREVLSSMREHARGRQKQRG---------AAALSRSRMSSAQRQQRQHSRDNGGNGAAPTEVLRER-VLADKNIDASPPAAAGAVTVFRKRHVVAARPDVLTRYPFVDDLAATQGGGVGAVMHQATPTTPIQYLAKREIRRLAHEAFRELKASALGIRLSDLPCALQFLFFGDSASLLTSKGGGS---------RXXXXXXXXXGANRSAKDVHLVMALARECLPPTLAHAARDTSTLSTAS-TQ-GGSEAGWMRDGQNMFVSERRWIKVVAHVIRRLWDMDGRPEDVAAXXXXXXXXXXXXXXXXXXAAAGPSRKPAAVPATAAPFGMEFQQPVWKRGGGG----------------------------------RYLRVTRADSFVGGLEEDSRSDTTRWGGFSETSR--ISASDGDGGPYPGEGVGGDDDEALRAWEE-AEDWVGAGRSIA-RAPGEEQEDYAQEEAGDLFAAARGLGAVHGSSRRRTQSAGAGGAGXXXXXXXXXXXSGADWKEGTRPAGMWEVSPPAHVVASSRTGRGRRGQGARRESGPAYLRGVQSRIRPQLDAHKDRLRKIAGARRSAVRDTVARRRLDRLDRGGNPGDVTQGFPADGRSGVSGDRDKDRDRGGYSLATEWDSNARGHTPGEHALDIAGAFLESSLMTRLA-GGDWFDGEDSEQISAGSSAAWEPEGAVRVPLGGGLRQ-------TNHPGGALRGRYDSGGGGGSRSRNGLSRRDDGQRAGRREAHTGWLGDFGPAHTHTVREVAGDVEEEEEEGRGXXXXXGDGRAWGTASRRDGGVSPPRDRGGSDGSTTSRQVSEGPAEEKGGGGKGGRADGGVGGXXXRGEXXXXXXXREXXGVDESTGAARGSDGG--GDTQEGSGSNGRGNTSTNENDD---ADIGLGQAEMGDFNVVAPLDGGLDAYLQLVSDGRAVAGX---XXXXXXXXXXXXXREGPALGXXSPGGYTGATSGSWWEEDRSALEGGDVV 1022
BLAST of mRNA_P-fluviatile_contig2.3869.1 vs. uniprot
Match: A0A835Z222_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z222_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.980e-22 Identity = 119/362 (32.87%), Postives = 161/362 (44.48%), Query Frame = 1
Query: 127 RYFLARYPTDTRDFIAERLAVYGIRSLLSSHRQEDL--TLDALISATDAADRDVLSLMREHAKGRQERRGER--VATTASASAAAQRSRFASPGQQPQPRASGGALPAPREALRERGLVGNMNARLQAKGAAAAAGLRKRRHEVTARPDVLTRYPFVDDLGATQGGGVGAALHRATPTTPVQYLAKREIKRLAHEAFRELKASALGIRLS--------------DLPCALQFLFFGDSASLLTAKGGGGGGCGEGSAGDDGVRSGGMRAKRRSAKDVHLVMALARECLPPTLAHAARDTSTLSSASSTQA----------GGVEA-GWRRDVQ----NMFVSERRWMRVVAHVVRRLWGMDG 1113
R+ LA++P + + I E LA +G+R LL +HR +DL A+++AT+AA R+V +++REH+ RG R T A+ + A +R+R ASP PR+ KG LR R RPDVL +YPFVD G VG L TTP LAKREI+RLA AF E ++SA GIRL D C D S L+A G A + +HL++ALA+E LP +L RDTS L S+ + +E G V+ + V + W R+VAHVVRRLW M+G
Sbjct: 13 RHVLAKFPREQKTVIEECLAWHGLRVLLQAHRLDDLLGNASAVLAATEAARREVHAILREHST-----RGPRPTARTKAATAVAKRRTRSASPTTPRLPRSP-------------------------VKGT-----LRGSRQPDIPRPDVLAKYPFVDGQG-----NVGEILACPPRTTPFHRLAKREIRRLAKAAFMEYRSSAHGIRLHAPPQIAPTGITPLFDARCRTSTPRLRDFKSALSALFG--------------------EATYSACGGMHLILALAQEALPHSLQLVLRDTSDLGDVSTAPSVATFGMGLTEDNIEVPGNTHPVKVPRNDAAVDQSEWTRLVAHVVRRLWQMEG 314 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig2.3869.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig2.3869.1 >prot_P-fluviatile_contig2.3869.1 ID=prot_P-fluviatile_contig2.3869.1|Name=mRNA_P-fluviatile_contig2.3869.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=982bp MATVRWPSTAMREQIRSNTRENAAGFDGSGHGPAFDGWGAHARYFLARYPback to top mRNA from alignment at P-fluviatile_contig2:1844461..1854595+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig2.3869.1 ID=mRNA_P-fluviatile_contig2.3869.1|Name=mRNA_P-fluviatile_contig2.3869.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10135bp|location=Sequence derived from alignment at P-fluviatile_contig2:1844461..1854595+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig2:1844461..1854595+ >mRNA_P-fluviatile_contig2.3869.1 ID=mRNA_P-fluviatile_contig2.3869.1|Name=mRNA_P-fluviatile_contig2.3869.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5892bp|location=Sequence derived from alignment at P-fluviatile_contig2:1844461..1854595+ (Porterinema fluviatile SAG_2381)back to top |