mRNA_P-fluviatile_contig2.3863.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig2.3863.1
Unique NamemRNA_P-fluviatile_contig2.3863.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig2.3863.1 vs. uniprot
Match: D7FVU1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVU1_ECTSI)

HSP 1 Score: 332 bits (851), Expect = 7.450e-113
Identity = 176/228 (77.19%), Postives = 206/228 (90.35%), Query Frame = 1 
Query:   31 SDLIKWAGVVAAALFIATPAKFLLSISNLEKPEYRVSKTVRVGRVVAEMRYYEPYLIAESVVSGGSMKEGTSQGFMNVARYIFGDNAGGRTTKDGKFEPEKVAMTAPVRTEQPQKAXXXXXXXXXXXLKSNFRNMKVSFVMPKKYTSRTLPRPKDGKVKIRSVDAHRVMAIRFSGRSPDERKIAEVSRDLFQALEIEGLTPKGGLMVYQYHPPFMPGFLRRNEVAVKV 714
            + L+KWAGV+  A+ +A PAKFL+S+S LE+P Y VSKTVRVGR+ AE+R YEPYLIAESVVSG +M+EGT++GFMNVA YIFGDNAGGR ++DG+ EP +VAMTAPVRTEQPQKAXXXXXXXXXXXLKSNFRNMKVSFVMPKKYT+ TLP+PKDG+VKI+SV AHR++A+RF G SPDE+K+AEVSR+LFQALE EGLTPKGGL+VYQY PPFMPGFLR NEVAV+V
Sbjct:   12 ATLLKWAGVLTGAICVALPAKFLVSVSRLERPTYTVSKTVRVGRLAAEVRDYEPYLIAESVVSGETMREGTTKGFMNVAGYIFGDNAGGRVSEDGEVEPAQVAMTAPVRTEQPQKAXXXXXXXXXXXLKSNFRNMKVSFVMPKKYTAGTLPKPKDGRVKIKSVGAHRMVAVRFRGPSPDEKKVAEVSRELFQALEGEGLTPKGGLLVYQYQPPFMPGFLRTNEVAVRV 239
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BLAST of mRNA_P-fluviatile_contig2.3863.1 vs. uniprot
Match: A0A7S0RNX4_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RNX4_9CHLO)

HSP 1 Score: 135 bits (341), Expect = 1.360e-35
Identity = 103/237 (43.46%), Postives = 132/237 (55.70%), Query Frame = 1 
Query:   49 AGVVAAALFIATPAKFLLSISNLEKPEYRVSKTVRV--------GRVVAEMRYYEPYLIAESVVSGGS-MKEGTSQGFMNVARYIFGDNAGGRTTKDGKFEPEKVAMTAPVRTEQPQKAXXXXXXXXXXXLK------SNFRNMKVSFVMPKKYTSRTLPRPKDGKVKIRSVDAHRVMAIRFSGRSPDERKIAEVSRDLFQALEIEGLTPKGGLMVYQYHPPFMPGFLRRNEVAVKV 714
            AG V   L +A P    L +  LEKP Y+V + +          G   AE+R Y P L+AE  V G + M+   +QGF  VA +IFG+N     T  GK   E VAMT+PV  E   K  XXXXXXXXXX           +  +V+F MP KYT  TLP+PKD  V +R V +  + A+ FSG  P E ++A+ +R L   LE EGL   G L V+QYHPPF PGF+R NEV ++V
Sbjct:   15 AGSVVGLLAVAWPVASWLQVKVLEKPAYKVVRQLGRSHKLGWLRGEYGAELRRYAPILVAEVEVRGAADMRSALNQGFRKVASFIFGNNTS-VVTPGGK---ESVAMTSPVVLEVSGKGKXXXXXXXXXXXXXXGSGPDGQKVYRVAFTMPSKYTPATLPKPKDPDVVVREVPSRTLAALGFSGNLPSEARVADKARALRALLEAEGLKAHGPLHVWQYHPPFAPGFVRVNEVLLEV 247
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BLAST of mRNA_P-fluviatile_contig2.3863.1 vs. uniprot
Match: A0A2V0P5D1_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P5D1_9CHLO)

HSP 1 Score: 130 bits (328), Expect = 1.170e-33
Identity = 94/240 (39.17%), Postives = 128/240 (53.33%), Query Frame = 1 
Query:   49 AGVVAAALFIATPAKFLLSISNLEKPEYRVSKTVRVGR-----------VVAEMRYYEPYLIAESVVSGGSMKEGTSQGFMNVARYIFGDNAGGRTTKDGKFEPEKVAMTAPVRTEQPQKAXXXXXXXXXXXLKSNFR-------NMKVSFVMPKKYTSRTLPRPKDGKVKIRSVDAHRVMAIRFSGRSPDERKIAEVSRDLFQALEIEGLTPKGGLMVYQYHPPFMPGFLRRNEVAVKV 714
            AG VA    +  P      I   EKP+Y V + +  G              AE+R YEP L+AE  V G +M+E +SQGF  +AR+IFG N     T  G    + VAMT+PVR E     XXXXXXXX   +  +          +++SFVMP KYT  TLPRP D  V+I+ V AH V A+ F G+  +   + +  + L + L+ EG+TP+G + + QYHPPF  G  R NEV  ++
Sbjct:   14 AGSVAGGAALLWPLVIAYEIRKCEKPKYAVLRALAAGPGDRRRFRLGFGQYAEVRRYEPMLVAEVEVEG-NMRETSSQGFRKIARFIFGAN-----TAAGGGGSQAVAMTSPVREELMPSEXXXXXXXXVMAMGGSESLGADEKGTVRMSFVMPSKYTKETLPRPNDPSVEIKEVPAHTVAALTFRGQVRNRTVVEQRKQQLLEILKAEGITPEGAVQLNQYHPPFTYGIQRVNEVLFRI 247
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BLAST of mRNA_P-fluviatile_contig2.3863.1 vs. uniprot
Match: E1Z7Z0_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z7Z0_CHLVA)

HSP 1 Score: 125 bits (315), Expect = 8.560e-32
Identity = 93/228 (40.79%), Postives = 127/228 (55.70%), Query Frame = 1 
Query:   52 GVVAAALFIATPAKFLLSISNLEKPEYRVSKTVR-----VGRV--VAEMRYYEPYLIAESVVSGGSMKEGTSQGFMNVARYIFGDNAGGRTTKDGKFEPEKVAMTAPVRTEQPQKAXXXXXXXXXXXLKSNFRNMKVSFVMPKKYTSRTLPRPKDGKVKIRSVDAHRVMAIRFSGRSPDERKIAEVSRDLFQALEIEGLTPKGGLMVYQYHPPFMPGFLRRNEVAVKV 714
            G +AAA  +A P      +   EKP++ V +T+       G+V   AE+R Y PYL+AE  +SGG+M +  S GF  +A +IFG N       DG     KVAMT+PV  E     XXXXXXXXXXX       +KVSF+MP +YT  TLPRP +  V I+ + A  + A+ + G+ P E ++     +L + L   GL PKG +  +QY PPF   +LR NEV  +V
Sbjct:   14 GGLAAAALVAWPLAIWYEVRKCEKPKHTVLRTLGQKKGWFGKVRPAAEVRLYSPYLLAEVTLSGGNMDKALSDGFRQIAGFIFGKNV----AADGASS--KVAMTSPVTLEMGGXXXXXXXXXXXXXXXXPGNELKVSFIMPSQYTKDTLPRPVNPNVVIKEMPARTMAALAWHGKPPREAEVQAKEAELLELLGEAGLKPKGPVHCWQYDPPFQWRWLRTNEVLFEV 235
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BLAST of mRNA_P-fluviatile_contig2.3863.1 vs. uniprot
Match: A0A7S3UFV7_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UFV7_9CHLO)

HSP 1 Score: 120 bits (301), Expect = 4.540e-30
Identity = 89/224 (39.73%), Postives = 111/224 (49.55%), Query Frame = 1 
Query:   55 VVAAALFIATPAKFLLSISNLEKPEYRVSKTVRVGRVVAEMRYYEPYLIAE-SVVSGGSMKEGTSQGFMNVARYIFGDNAGGRTTKDGKFEPEKVAMTAPVRTEQPQKAXXXXXXXXXXXLKSNFRNMKVSFVMPKKYTSRTLPRPKDGKVKIRSVDAHRVMAIRFSG--RSPDERKIAEVSRDLFQALEIEGLT-PKGGLMVYQYHPPFMPGFLRRNEVAVKV 714
            VVAAA+  A PA     +  LEKP+YRV KT+   +   E+R YEPY++AE     G  M    S GF  +A YIF  +    TTK      +K+AMT+PVR E                        KVSFVMP KY    LP   + +V IR V    V A+ FSG  RS   + I +    +   L    LT     +MVYQYHPPF  GFLR+NEV +KV
Sbjct:    7 VVAAAILAAWPALVAYEVKKLEKPKYRVVKTLLGKKNKVEIRTYEPYVVAEYEAKEGTDMDNALSGGFRAIAGYIFARDQP-ETTK------QKIAMTSPVRLEM-----------------EGGEKHKVSFVMPSKYNKDNLPPCNNQEVNIREVGETTVAALTFSGSRRSITPKTIHDKKNRILDVLRENDLTGDPETVMVYQYHPPFTLGFLRKNEVLLKV 206
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BLAST of mRNA_P-fluviatile_contig2.3863.1 vs. uniprot
Match: A0A6P1E091_9GAMM (Heme-binding protein n=1 Tax=Thiorhodococcus mannitoliphagus TaxID=329406 RepID=A0A6P1E091_9GAMM)

HSP 1 Score: 108 bits (269), Expect = 2.750e-25
Identity = 89/217 (41.01%), Postives = 119/217 (54.84%), Query Frame = 1 
Query:   64 AALFIATPAKFLLSISNLEKPEYRVSKTVRVGRVVAEMRYYEPYLIAESVVSGGSMKEGTSQGFMNVARYIFGDNAGGRTTKDGKFEPEKVAMTAPVRTEQPQKAXXXXXXXXXXXLKSNFRNMKVSFVMPKKYTSRTLPRPKDGKVKIRSVDAHRVMAIRFSGRSPDERKIAEVSRDLFQALEIEGLTPKGGLMVYQYHPPFMPGFLRRNEVAVKV 714
            A L IA  A F+  + N+E P+Y V +  + G    E+R Y P ++AE V   GS KE  S GF  +A YIF  +  G          ++VAMTAPV T+QP   XXXXXXXXX        + +V F+MP  Y    LP P D  V+++ +   RV A+RFSGR+ D   IAE    L   L+ +GL+     +   Y+ PF PGFLRRNEV ++V
Sbjct:   12 ALLGIAAMAVFVFVVQNVETPDYEVVR--QEGPF--EIRQYPPLVVAE-VARKGSRKEALSAGFSPLAGYIFAKDRTG----------DRVAMTAPV-TQQPXXXXXXXXXXXXAQTAEG--SWRVRFIMPSSYALEALPPPADPDVRLQELPPQRVAAVRFSGRTTDAA-IAEQEEALRAWLQAQGLSAADSPVYAYYNDPFTPGFLRRNEVLIRV 209
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BLAST of mRNA_P-fluviatile_contig2.3863.1 vs. uniprot
Match: I0Z4N7_COCSC (SOUL heme-binding protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z4N7_COCSC)

HSP 1 Score: 107 bits (268), Expect = 7.900e-25
Identity = 82/240 (34.17%), Postives = 123/240 (51.25%), Query Frame = 1 
Query:   52 GVVAAALFIATPAKFLLSISNLEKPEYRVSKTVRVGR-------VVAEMRYYEPYLIAESVVSGGSMKEGTSQGFMNVARYIFGDNAGGRTTKDGKFEPEKVAMTAPVRTEQPQKAXXXXXXXXXXXLKSNFRNMK-----VSFVMPKKY-TSRTLPRPKDGKVKIRSVDAHRVMAIRFSGRS-PDERKIAEVSRDLFQAL-----EIEGLTPKGGLMVYQYHPPFMPGFLRRNEVAVKV 714
            G+    + IA P     +++ LEKP+Y V K +   +           +R Y PYL+AE    G  M+E  S GF  VA YIFG+N    T    +   EK+AMT+PV  E+  ++      XXXXX      +M      VSF+MP KY T   LP+PK+  +++R V A ++ AI + G + P ER +    ++L  AL     E+E  +PK    + QY+PPF P F+R  ++ + +
Sbjct:   13 GIAVGVVGIAWPFVSWRAVATLEKPKYVVLKALGQEKRSFYDREPAITVRQYAPYLVAEVTAEGKDMREAISDGFRQVANYIFGNN----TASGSEETSEKIAMTSPVSAEEDFRSMKGGSGXXXXXXXXXXTDMDGTKYVVSFLMPTKYRTKEDLPKPKNPNLRLREVPASKMAAISWRGGARPTERIVESKKQELLSALKEAGIEVEDASPK----LAQYYPPFAPRFIRLQDLLLPI 244
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BLAST of mRNA_P-fluviatile_contig2.3863.1 vs. uniprot
Match: A0A7Y3B1G8_9GAMM (Heme-binding protein n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y3B1G8_9GAMM)

HSP 1 Score: 106 bits (265), Expect = 8.400e-25
Identity = 87/222 (39.19%), Postives = 130/222 (58.56%), Query Frame = 1 
Query:   64 AALFIATPAKFLLS-----ISNLEKPEYRVSKTVRVGRVVAEMRYYEPYLIAESVVSGGSMKEGTSQGFMNVARYIFGDNAGGRTTKDGKFEPEKVAMTAPVRTEQPQKAXXXXXXXXXXXLKSNFRNMKVSFVMPKKYTSRTLPRPKDGKVKIRSVDAHRVMAIRFSGRSPDERKIAEVSRDLFQALEIEGLTPKGGLMVYQYHPPFMPGFLRRNEVAVKV 714
            A L I T A  LL      +  +E+ EYRV +    G+V  E+R Y P+++AE+VV G   +E +++ F  + RYI GDN   R          ++AMTAPV  ++  + XXXXXXXXXX     +    VSF+MP   T  T+P+P D ++ +R V AHR +AIR+SGR  +ER +  +++ L   +E EGL   G  +  +Y+ PF+P FLRRNE+ +++
Sbjct:    2 ARLLIHTLAAVLLGAMATPVCAVEEAEYRVLR--EDGKV--EIREYAPFIVAETVVEG-DFEEASNRAFRALFRYIDGDNTARR----------EIAMTAPVSQQKSSQKXXXXXXXXXXKAPGGWA---VSFMMPSSLTMETVPQPDDPEIMLRQVSAHRAVAIRYSGRWTEERYLDHLAK-LRGWVEREGLETVGDPVWARYNAPFVPWFLRRNEILLQL 204
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BLAST of mRNA_P-fluviatile_contig2.3863.1 vs. uniprot
Match: A0A3C1YWH2_9BACT (Heme-binding protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3C1YWH2_9BACT)

HSP 1 Score: 106 bits (264), Expect = 1.120e-24
Identity = 78/200 (39.00%), Postives = 116/200 (58.00%), Query Frame = 1 
Query:  115 LEKPEYRVSKTVRVGRVVAEMRYYEPYLIAESVVSGGSMKEGTSQGFMNVARYIFGDNAGGRTTKDGKFEPEKVAMTAPVRTEQPQKAXXXXXXXXXXXLKSNFRNMKVSFVMPKKYTSRTLPRPKDGKVKIRSVDAHRVMAIRFSGRSPDERKIAEVSRDLFQALEIEGLTPKGGLMVYQYHPPFMPGFLRRNEVAVKV 714
            +E+P Y+V K+   G +  E+R Y+ Y+IAE+ +S   M E ++  F  + +YI G+N+              +AMTAPV T + +K XXXXXXXXXX    +     V+F +P KY+  T P P D  + IR V +H V  IRFSGR   E  + E  ++LFQ ++  G  P G  ++ +Y PPFMP F+RRNE+ +++
Sbjct:   21 IEEPSYKVLKSD--GNI--EIREYQSYVIAETFISTSVMDEASNAAFKKLFKYISGNNS----------SKSDIAMTAPVTTTRSEKIXXXXXXXXXX----SADGYTVAFTLPMKYSLATSPIPTDTAIHIREVPSHTVAVIRFSGRWT-ETSMNEHEQELFQWMKSNGHVPIGIPVIARYDPPFMPWFMRRNEIQIEI 201
[Close]
BLAST of mRNA_P-fluviatile_contig2.3863.1 vs. uniprot
Match: A0A6M0K2D3_9GAMM (Heme-binding protein n=1 Tax=Thiorhodococcus minor TaxID=57489 RepID=A0A6M0K2D3_9GAMM)

HSP 1 Score: 106 bits (264), Expect = 1.500e-24
Identity = 84/212 (39.62%), Postives = 116/212 (54.72%), Query Frame = 1 
Query:   79 ATPAKFLLSISNLEKPEYRVSKTVRVGRVVAEMRYYEPYLIAESVVSGGSMKEGTSQGFMNVARYIFGDNAGGRTTKDGKFEPEKVAMTAPVRTEQPQKAXXXXXXXXXXXLKSNFRNMKVSFVMPKKYTSRTLPRPKDGKVKIRSVDAHRVMAIRFSGRSPDERKIAEVSRDLFQALEIEGLTPKGGLMVYQYHPPFMPGFLRRNEVAVKV 714
            A  A F+L + N+E P+Y V +  + G    E+R Y P L+   V   G+ KE  S GF  +A YIF     G          ++VAMTAPV     Q A  XXXXXXXXX  ++  + +V F+MP  Y    LP P    V+++ +   RV A+RFSGR+ D   IAE  + L + LE +GL+P    +   Y+ PF PGFLRRNEV +++
Sbjct:   17 AAMAVFVLIVQNVETPDYEVVR--KEGPF--EIRQY-PSLVVAEVARKGTRKEALSAGFSPLAGYIFAKERSG----------DRVAMTAPVTQ---QLAEQXXXXXXXXXAPADDGSWRVRFIMPAAYALEALPPPASPDVRLQELPTQRVAAVRFSGRTTDAT-IAEQEQALREWLEAQGLSPADAPVYAYYNDPFTPGFLRRNEVMIRI 209
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig2.3863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVU1_ECTSI7.450e-11377.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0RNX4_9CHLO1.360e-3543.46Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A2V0P5D1_9CHLO1.170e-3339.17Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
E1Z7Z0_CHLVA8.560e-3240.79Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
A0A7S3UFV7_9CHLO4.540e-3039.73Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A6P1E091_9GAMM2.750e-2541.01Heme-binding protein n=1 Tax=Thiorhodococcus manni... [more]
I0Z4N7_COCSC7.900e-2534.17SOUL heme-binding protein n=1 Tax=Coccomyxa subell... [more]
A0A7Y3B1G8_9GAMM8.400e-2539.19Heme-binding protein n=1 Tax=Xanthomonadales bacte... [more]
A0A3C1YWH2_9BACT1.120e-2439.00Heme-binding protein n=1 Tax=Bacteroidetes bacteri... [more]
A0A6M0K2D3_9GAMM1.500e-2439.62Heme-binding protein n=1 Tax=Thiorhodococcus minor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig2contigP-fluviatile_contig2:1813114..1819409 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score330.5
Seed ortholog evalue6.4e-88
Seed eggNOG ortholog2880.D7FVU1
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0010287,GO:0016020,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
EggNOG free text desc.SOUL heme-binding protein
EggNOG OGs2CY9I@1,2S2YK@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionSOUL haem-binding protein
Ec32 orthologEc-01_002130.1
Exons5
Model size717
Cds size702
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig2.3863.1prot_P-fluviatile_contig2.3863.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig2 1813129..1819409 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815845.5951793-UTR-P-fluviatile_contig2:1813113..18131281622815845.5951793-UTR-P-fluviatile_contig2:1813113..1813128Porterinema fluviatile SAG_2381UTRP-fluviatile_contig2 1813114..1813128 +
1693563503.5764344-UTR-P-fluviatile_contig2:1813113..18131281693563503.5764344-UTR-P-fluviatile_contig2:1813113..1813128Porterinema fluviatile SAG_2381UTRP-fluviatile_contig2 1813114..1813128 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815845.6076214-CDS-P-fluviatile_contig2:1813128..18132111622815845.6076214-CDS-P-fluviatile_contig2:1813128..1813211Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 1813129..1813211 +
1693563503.590363-CDS-P-fluviatile_contig2:1813128..18132111693563503.590363-CDS-P-fluviatile_contig2:1813128..1813211Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 1813129..1813211 +
1622815845.6201038-CDS-P-fluviatile_contig2:1813870..18140411622815845.6201038-CDS-P-fluviatile_contig2:1813870..1814041Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 1813871..1814041 +
1693563503.600424-CDS-P-fluviatile_contig2:1813870..18140411693563503.600424-CDS-P-fluviatile_contig2:1813870..1814041Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 1813871..1814041 +
1622815845.6306877-CDS-P-fluviatile_contig2:1817081..18172741622815845.6306877-CDS-P-fluviatile_contig2:1817081..1817274Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 1817082..1817274 +
1693563503.6081302-CDS-P-fluviatile_contig2:1817081..18172741693563503.6081302-CDS-P-fluviatile_contig2:1817081..1817274Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 1817082..1817274 +
1622815845.6403897-CDS-P-fluviatile_contig2:1818417..18185251622815845.6403897-CDS-P-fluviatile_contig2:1818417..1818525Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 1818418..1818525 +
1693563503.623127-CDS-P-fluviatile_contig2:1818417..18185251693563503.623127-CDS-P-fluviatile_contig2:1818417..1818525Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 1818418..1818525 +
1622815845.651364-CDS-P-fluviatile_contig2:1819262..18194091622815845.651364-CDS-P-fluviatile_contig2:1819262..1819409Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 1819263..1819409 +
1693563503.6349967-CDS-P-fluviatile_contig2:1819262..18194091693563503.6349967-CDS-P-fluviatile_contig2:1819262..1819409Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 1819263..1819409 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig2.3863.1

>prot_P-fluviatile_contig2.3863.1 ID=prot_P-fluviatile_contig2.3863.1|Name=mRNA_P-fluviatile_contig2.3863.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=234bp
MAASISDLIKWAGVVAAALFIATPAKFLLSISNLEKPEYRVSKTVRVGRV
VAEMRYYEPYLIAESVVSGGSMKEGTSQGFMNVARYIFGDNAGGRTTKDG
KFEPEKVAMTAPVRTEQPQKAKVAMTAPVRTELKSNFRNMKVSFVMPKKY
TSRTLPRPKDGKVKIRSVDAHRVMAIRFSGRSPDERKIAEVSRDLFQALE
IEGLTPKGGLMVYQYHPPFMPGFLRRNEVAVKV*
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mRNA from alignment at P-fluviatile_contig2:1813114..1819409+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig2.3863.1 ID=mRNA_P-fluviatile_contig2.3863.1|Name=mRNA_P-fluviatile_contig2.3863.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6296bp|location=Sequence derived from alignment at P-fluviatile_contig2:1813114..1819409+ (Porterinema fluviatile SAG_2381)
ATCCCACAAGTGAAGATGGCGGCGTCGATCTCGGATTTGATCAAATGGGC
AGGAGTTGTTGCAGCGGCTCTCTTTATCGCCACTCCAGCAAAATTTCTGT
GAGGAGAGATAAGAGACAAGTGTCATGAAAAGATAAACGTTTTCCCAAGA
GACTGTCAGAAAATGGCTTTTCACGTGTTGTGTATGTGTCCTTTGTCCTG
CTGTGTTTGCGTTCGAGCCTTCGGCGGAAATTACCGCCCTCAATTATCAG
GCGCGTAGCGAGGGCGATGTACCGGCATTTAGACGTAGATGGATTTTGTC
GCGCAACGAATGAAATAATTCGAAGCAGTTATACTCCGGAGTACTTCGAA
GTAGCACACGTTGACCTCGTTGTTGTAGCCCTCTCGATCTGTCAGCCTGT
TGGGTGGGACAACGCTGTGCTCACTTGCACGTTGGGGAGTCAGGAAGCAG
CAGCTTCGGTTAGGATTTTTGTTTGAAGAACGGCCGCAATGTGCCACACA
ACGCATACGAAACCAGAGTCTAGCTGAGAGCGTTTCCAAGAAGCACGGCA
ATGAGGATCTCCGGCAAAGCACAAAACAAGAATGGACCGAACTTGCGACG
TAGCTTCGAACCAAGCGGGGCATCGGCCATTGAGCGACCTCTGTTGCACA
TTTTCGTGTCCTCTCTTTCTCTCTCCCTCTCTCTCCCTCTCTCTCTCCTT
ACCGGCCCTACCTCCCTCTCCCTTCCTGCCTCCCCCTCCACCCCCTCTGC
TTACCAGGTTGAGCATTAGCAACCTGGAAAAGCCGGAATACCGCGTGTCG
AAGACCGTTCGTGTGGGCAGGGTGGTGGCAGAGATGAGATACTACGAGCC
CTACTTGATCGCGGAATCCGTCGTCTCCGGGGGCTCCATGAAGGAGGGAA
CCAGCCAAGGCTTCATGAACGTGGCTCGGTGCGTTGATAGAAGATCGTTG
CTCTCGTCTGATTTGGTGCTTGCTCCCGTGGACCGTAGTCGTTGAATCGT
TCTCAGACACAGGGGTCGATATTCTTCGACCATAGTAACCTACACAGGCG
TAGTGGGCTCAGTGCTGTCTGTACAAAAAAAGAATGAAGATATTGTAGCT
ATCGCTACAACCGAGTGATAGGTGATAGATGTAACTGTTTGTCGTCAGAC
GTGAACGTCCACGGGCGGAAATGCGTGTGATTGCGAGGGGCACACAGGAT
TTTTTTTGTTTTTCTAGTTACCGCGACGGCGCTGAAGACGCCCATGTCCA
TGTACTTCACCCTCGTGCTCTGTGCCAACTGCCCAAGCCAACCCTCTTCC
TACAGCCTAGCCTTCATAGTCGACGAATTTCCAAGGTTGCCTATCCTGTC
GAAACTCATGGGCTCTATGATGAGGTCCACAAGCCTTTTGGTCCTACCGA
GACAGCCGAAAGTTAACCTCGTGCAGGCCTCCTTGGGCCCCAAGTCTACG
ACGGCCTTGGCTAAGGTCTGGCCCTATGATTTATGCATCATGATCATCCA
GCAGAGCCTTAAGGGCGGCTGCGTCCGGACTTGCGTCCCCTCGGCGAACC
CGATCGGAAGAGTTGCCTCATGTGCTCTATCGTCGTGGCGCCATCGCGCG
ATGAGCATCTCATCCGTCTGGGTTAGGCCTTGGAGCTCGGGCGGCACGCT
CCCAGGATCCATGTTGTTGTCGGAGGACAGCAGCGTCGGGCTTTTGTTGT
GCTTCTTGCACCGCCGGCAACTGCAAAGGAAGAGCGTGGGGAGTCGTGCG
GTAGGGTAAGGAAGGTAGTGTACGCTCTACCTAACAGCGGGGAACCTGGT
AGCGTCGGGGTTGAGACGGGTGACAACCTGTTGGAGGTGCCCGGCTCGAA
TCCCGACAAACTCTTTCCTTTTTTTCTGGTTCTCTTTTTGTTTTTCGTCG
AACGGTATGGTATCCTCGGTGCAACGCGTCCTTTTCTTTCGAAGTTGACA
CAACATAACAAAAACACACGCACCCAGCATTGGCAGAGAGAATACCACAC
GCCTGTAGACACCATCTCTGAGGTTTCCCAACGCTCCGAGCACACAGCGC
ACACACGCATCCTCCGTGCGCTCATCGGCTGCTGGAAGTTCGACTGCAAC
TCCTCTCTAGCGCAACCTAACTTTTCCAGCGGCGTCGCGGGGTTAAAGTC
CGCCAGGTCTCTGCGCCTCACAGCAGCCTCGCTCTCTCGCCTTGCTCTCT
CGACATCCTCGACAGCCCGCTGATCGGCGGCAGCCCGTTGTCTGCGGGCC
GCATCCCGTTCTCTTTGGGCTGTCAGCCTGCGAGGCGAGGTAGCGTATTG
AAGTTGCGATTTGTTAAATGGTTGTACTTTTCTTAAGATATACGTAGTAC
AACATATCCACTGAGCTAAACAGTCAGCTAAGCAGCTCGTCTAAGTGTGC
AGGAGCGGGCTACAGCAGCATGACGATGCGGCGCAAAAAAAAAAAAGCTG
GAAAAGCACACACACACACACACACAACACACCTCGCCGTGCGCGCCTGT
GTTGTCTCCTGCCGGCGCCTCGCTGCCGCTCTCGCTTTCGGTGTTGTGGT
GGCGGTTGTGCTCGCCGTCGCCTAGCAGCGTCTCGCTGCCGGTTCGCCTG
CAGCCTGTATGTGGTGTGTGAGAGGGAGAGAGGAGAGGGAGAGACAAAGT
CTGTGCTGGGTGTGGCCTGTTGCTCGCCTTGTTCGTGTGGCCTGCGGCGT
GCCTTGTACCCTGCAGGTCGTACCTTACGTGTTTTGCACTGTGTGTGCGC
GGAAGCACCGAAAACGCGCCGTTGGGAAATTTCGAATCTGCGGCAAGCAC
GCACCTTTCTTTCTGTCCCGCGCCTTGCGGCAGCCCTCTGACGAGCAGCA
GCCCTCGCCCTCTCAAGCTGCGGGCTGTGGAGGGACTCCCTCTCCGCGCG
GCTTCGTCTGCGTCGGGAGTCTGTGTGCGCGTCCGCCACACGAACCGAGT
TTGGGTCAATCGAGCCCAAGGGACGCCTAATTACCCACTAGACTACATCC
AGAGGCAGCAGCTACAACACAGCAAGAGCAAACAGCCCAAACCCTGCTGC
ATATCTGGGAGACAGCAGCGACAGCAGCTCGGCTGAAGCTACACCCGCTG
CTACACACCCTGTTACACTGGCTGCTGCTGTCGCTGTGTGTGTGGTCTGG
GCGCTTTTTTTTTTCTCCGTGGGATCCGCAGCAGTCTAAACCCAAGTCAC
GTGCCGTTGTTCTAAAATCAAGTTGAAGCGAACACACGAACACACGCTCA
AGTCTTTTTCCTGGACCGAGCGCTATTACGGGGGCACCGCGGGCTGAAAC
CTCAGGCACACATTAGAAGACCTCGCTTCGCTCGGAATAATTTTGCATGG
GGTCGATATTTCACGACCGTGTTTCTCCCCCTTTCCAACACCACCGCGGC
GCCCGCGGCCGAAGGGACAAGAAGTGGAGGCGCGCTTTTGCGGCCTCAGG
GAAATAGCGGTATCACCCCGAAGTGAGGGGAATCGAGGAGGGCGGTCGGA
ACATCCCCTGGCTGCCCAGTGGTACCTTGGGGGGGTAGGATCCAATGGAG
GGTTGGGGCGTGGGGCTGAAGGCGCAACAGCGCCTTCCATCTTTCATTCT
CCAACACCATCCTGCGAGGAGGCAGAAATGGAACTGCCGTATCTCTGTTT
GCGGCGGCGCTGCTGCTGTTTTATTTTTGTCTTTTACTCTTGACGCCGGA
GACCGACAACCAGCCGCGCCACGTGGCAGACAAACAAAATCTTCACCGCT
CATCCAACATCCACATGAAATAGTTTTCCTTTGAAGCCTGTTACCACGGA
GCCCATCCGGTGGGACCTACGCGCGAACATCCGATGGGCACTAGGGGGTA
GTAGGGAAGATTGTGGAGCGAGAACAACAGCGCGTGGATTGTTTTCCTCA
AGCGTCCGTGGTAAGACAACGTTTCGAAATGGCGGCGCTCATGTGTGCTG
GTGCTGCCTGTCGGGCAGCTACATATTCGGAGACAACGCTGGCGGCCGCA
CGACGAAGGACGGGAAGTTCGAGCCGGAGAAGGTGGCGATGACGGCGCCC
GTCAGGACTGAACAGCCGCAGAAGGCCAAGGTCGCCATGACCGCGCCGGT
CAGGACGGAGCTCAAGTCCAACTTTCGAAATATGAAAGTCTCCTTCGTCA
TGCCAAAGAAGGTGAGCAGGTATATGGGTGAACACAGGTAGTGTGTGGCC
GGACCACGGCCCATTGGTATCCAGGGCTGCCCTTACGATTCACGCGGATC
TGACCATCGTACGACTTTCCGGACATGAAGAAAACGCTGCAATAGAAGAC
ACAAGCCAAAGGAGTTTTGCAGAACAAACTTAAATGATTTCTGAGACATC
TTCCCGCACGTTTGCAAACTTGAGTTTGGACGCGTGTCTCGGATTCCATG
GCGATCGCAGAACCACGAACGTCACTACAATAGGAATGACCGCATACCAT
CGTCCACGTGTTGTGATTTTCTTCTGCATTCTTCGGGCGCTCGTTTGTTT
AAAAGGCGTTTGATGTTGGACAACTGGGAGTCGGTCGGGAGAGATTGCCC
AGGCCTGCAGGCAGGGGAGCCGCTTCGGCTCATTGCGGCAGCGGGACCAA
CGGAAACTGTTGCTTTTTTTGACAGCTTATTTCTTGAGTGGTCTTTGCTT
GGTTTGACTTCTCTCGTGTTTGGGATGACAACTCGAGGCAACCGATTCAT
CCCGAGGATGTAGGTCGTTGGTCAAGGCAGAAAGACCACAAGACTTTGAT
ATATAATATTGCCGAGGGGGGCTACGGCAGGGTTGTGCCGGGGGTTGCCG
CTGAAGATCTGCTGTGTTTCGTCTTCACGTTTTCTGTTTCTGTGGTAGCA
CTTGGGGCATGCCATCCCCGTATTGTTGGAAGGCGGTCCCACCGCACCCA
AGCTTTGGTTGGCCACGTGTGGCACGTAAGGTCCCCTGCGCTGAAGCGAA
AGAAGGTCGTATTATTGTGTATTGCTTCACCCGCCATCCGACAGCTTGTA
GAGTCACACATTTCTATTAATGGCGGACCTATCCTATGTCCCACAACCCT
CACTTGTTTCCCCCCCTTTTTGATATTGGGCGGCTTCTCACATCGACGGT
GCTACTTTCTGTTCCGTCTTGGGGGTTGGTGGCTTGTCGAGCACTTGTTC
GCCTGCTCCTCGATCAGCTCGCTCCCTGTCCCCATCCTCTCGCGACTATG
CTTGCGGAACACGCTTCCTAGATGTTGTTTCTTCAATGTCTCGTTCTGTC
GGTGTGCTCTCCGTGCCGTGCACACGCCGCCCCTGATCGGGTCGGGGTCG
GTAGTACACCTCGCGGACGCTGCCCAGGCCGAAGGACGGCAAGGTCAAGA
TCAGGAGCGTGGACGCACATCGTGTGATGGCGATCCGGTTCAGCGGTCGT
TCCCCCGACGAGGTGCGAGAATTATGGGCGATAGTTTCGGATAATGTTTG
CTACACGTCTGCGGAACACAGCTTGATCGTCTTCGTTACCAGAAAACTCG
TCGGCCATTTTGTTGCAGATGCACACTCACATCATGCAAGGAGGGGCACC
CCAAGAGATAGAATAAAGGGGCTACCGGTTTGCAGAGTTGGTTCCTTCCG
AAAAAGCAGGAAAACCTCGACGAAGTGCAAGGGTTGGGGGCAGGCGCCTC
GGGACCGTTGCACGTAAAATCCATAAACTGTTTCATTGACTGGCTGAGCG
CTGGTTCGAATTGCTTGTCAGCTGCCCTTGGAGCGCAGAGAGCTCCGCTC
GCTCTCGACCGGGTCCAACAATCGTGAAGGGTAATGACAACGAACAGTCT
AAACAAATGGTCACTCAACATAGCGGCGTGAAGAAAGTGTTTGTGTAGCA
AACGGGAGTCACGTTCGTGCCCGACATCCCCCACAAGTCTCGCCAGCAAC
AGCTCGCGTGTAATACTCAGCCCCCAAATCTCCTCCCACCTCCTGGCGCG
TCGTTTTCGTTTTCTGGAATGACTAGACCCCCCCCCCCCTTCCTTTGATC
CGTTTTGAAAGGGATACGTGGTCAACGGTCAAAAGACCGAGGCAAGTAAC
ACATGAGTACGCCCCCCCCACTCTCCCTCTCGTCTTTGCTGCCACCCAAA
ATTGTACTTCCGATGTGCTGGATGGATGGGCGGCATGCACGGCCAACAGA
GGAAGATAGCGGAGGTGTCTCGAGATTTGTTCCAGGCGCTCGAAATTGAA
GGTCTCACACCCAAGGGGGGGCTCATGGTCTACCAGTACCACCCTCCTTT
CATGCCCGGCTTCCTGCGGCGAAACGAGGTCGCCGTGAAAGTATGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig2:1813114..1819409+

>mRNA_P-fluviatile_contig2.3863.1 ID=mRNA_P-fluviatile_contig2.3863.1|Name=mRNA_P-fluviatile_contig2.3863.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1404bp|location=Sequence derived from alignment at P-fluviatile_contig2:1813114..1819409+ (Porterinema fluviatile SAG_2381)
ATGGCGGCGTCGATCTCGGATTTGATCAAATGGGCAGGAGTTGTTGCAGC
GGCTCTCTTTATCGCCACTCCAGCAAAATTTCTATGGCGGCGTCGATCTC
GGATTTGATCAAATGGGCAGGAGTTGTTGCAGCGGCTCTCTTTATCGCCA
CTCCAGCAAAATTTCTGTTGAGCATTAGCAACCTGGAAAAGCCGGAATAC
CGCGTGTCGAAGACCGTTCGTGTGGGCAGGGTGGTGGCAGAGATGAGATA
CTACGAGCCCTACTTGATCGCGGAATCCGTCGTCTCCGGGGGCTCCATGA
AGGAGGGAACCAGCCAAGGCTTCATGAACGTGGCTCGGTTGAGCATTAGC
AACCTGGAAAAGCCGGAATACCGCGTGTCGAAGACCGTTCGTGTGGGCAG
GGTGGTGGCAGAGATGAGATACTACGAGCCCTACTTGATCGCGGAATCCG
TCGTCTCCGGGGGCTCCATGAAGGAGGGAACCAGCCAAGGCTTCATGAAC
GTGGCTCGCTACATATTCGGAGACAACGCTGGCGGCCGCACGACGAAGGA
CGGGAAGTTCGAGCCGGAGAAGGTGGCGATGACGGCGCCCGTCAGGACTG
AACAGCCGCAGAAGGCCAAGGTCGCCATGACCGCGCCGGTCAGGACGGAG
CTCAAGTCCAACTTTCGAAATATGAAAGTCTCCTTCGTCATGCCAAAGAA
GCTACATATTCGGAGACAACGCTGGCGGCCGCACGACGAAGGACGGGAAG
TTCGAGCCGGAGAAGGTGGCGATGACGGCGCCCGTCAGGACTGAACAGCC
GCAGAAGGCCAAGGTCGCCATGACCGCGCCGGTCAGGACGGAGCTCAAGT
CCAACTTTCGAAATATGAAAGTCTCCTTCGTCATGCCAAAGAAGTACACC
TCGCGGACGCTGCCCAGGCCGAAGGACGGCAAGGTCAAGATCAGGAGCGT
GGACGCACATCGTGTGATGGCGATCCGGTTCAGCGGTCGTTCCCCCGACG
AGTACACCTCGCGGACGCTGCCCAGGCCGAAGGACGGCAAGGTCAAGATC
AGGAGCGTGGACGCACATCGTGTGATGGCGATCCGGTTCAGCGGTCGTTC
CCCCGACGAGAGGAAGATAGCGGAGGTGTCTCGAGATTTGTTCCAGGCGC
TCGAAATTGAAGGTCTCACACCCAAGGGGGGGCTCATGGTCTACCAGTAC
CACCCTCCTTTCATGCCCGGCTTCCTGCGGCGAAACGAGGTCGCCGTGAA
AGTATGAAGGAAGATAGCGGAGGTGTCTCGAGATTTGTTCCAGGCGCTCG
AAATTGAAGGTCTCACACCCAAGGGGGGGCTCATGGTCTACCAGTACCAC
CCTCCTTTCATGCCCGGCTTCCTGCGGCGAAACGAGGTCGCCGTGAAAGT
ATGA
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