mRNA_P-fluviatile_contig2.3781.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig2.3781.1 vs. uniprot
Match: D7G948_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G948_ECTSI) HSP 1 Score: 174 bits (440), Expect = 4.080e-45 Identity = 101/185 (54.59%), Postives = 121/185 (65.41%), Query Frame = 1
Query: 898 RFEAAKGRVVNASDLAAAGLAEEDDAAITH-----------GTPTSKGKGKEKQGGGRLSEQQKLVGVKVRKFFPRYEEEFDGKVEKYLPPESDDDFGDLWLIKYEDDDTEHMDAEELAKARALYKKRYGLVRKRVSYPTSALGAGQPATKSSKDGGRITLYGEMPPGSRGIFCTIDGYRRSKKR 1419
RFEA KG V A DLA L +ED A++ GTP KG GK K RL +KLVG VRK+FPRY+EEFDG+V YLPPESDD+ GDLWLIKYED D EH + +ELA+ARALY KR+ L +K V++PT AL GQ T S +I ++GE P G RG+FCTI GYRRSK +
Sbjct: 71 RFEATKGGKVTAEDLANEDLHDEDVKAVSSESQSSTNGGGKGTPKRKGXGKVKAA--RLDACEKLVGAGVRKYFPRYDEEFDGEVSSYLPPESDDEHGDLWLIKYEDGDNEHFEPDELAEARALYNKRHALAKKVVTFPTKALFGGQAVTNLSLR--KINVFGETPVGPRGVFCTIRGYRRSKSK 251
BLAST of mRNA_P-fluviatile_contig2.3781.1 vs. uniprot
Match: D7FUE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE5_ECTSI) HSP 1 Score: 174 bits (440), Expect = 4.460e-45 Identity = 107/235 (45.53%), Postives = 137/235 (58.30%), Query Frame = 1
Query: 721 GIRVAREFT-LGVFTGEVVEV--KDGDTRGPLWRVLYEDGDGEDFNEAEMIKYMGVYKLLADRFEAAKGRVVNASDLAAAGLAEEDDAAITHGTPTSKGKGKEKQGGGRLSEQQKLVGVKVRKFFPRYEEEFDGKVEKYLPPESDDDFGDLWLIKYEDDDTEHMDAEELAKARALYKKRYGLVRKRVSYPTSALGAGQPATKSSKDGGRITLYGEMPPGSRGIFCTIDGYRRSKK 1416
G VA++F G++ GEV++V + T G W+VLYED D ED ++ E Y +L DRF AA+ + V + D A AGL D + P S LVGV+VRK FP Y+EEFDG V K+ PP+ DD G+LWLIKY+D D EHM++EEL +A+ LYKK YGLV+KRV +P + P K S G +TLYGE PGSR +F TI GYR KK
Sbjct: 48 GALVAKDFPGHGLYIGEVIKVNARAKVTGGTTWKVLYEDQDMEDLDQQEFQTCAKAYDVLQDRFAAAQEKRVTSKDFAQAGL----DVSDGDEQPNS------------------LVGVRVRKLFPLYDEEFDGTVSKHFPPQEDDSHGNLWLIKYDDGDAEHMNSEELDEAKVLYKKHYGLVKKRVKFPAN------PGGKGSSTGATVTLYGEQIPGSR-VFATIAGYRNYKK 253
BLAST of mRNA_P-fluviatile_contig2.3781.1 vs. uniprot
Match: D8LNZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNZ0_ECTSI) HSP 1 Score: 80.1 bits (196), Expect = 6.180e-14 Identity = 47/96 (48.96%), Postives = 64/96 (66.67%), Query Frame = 1
Query: 97 GVATEGEGFIGRKLLKGYGDTVVNGFVKEYNPPAGGGEPESWTISYDAPYKDLDAGSRGCDDDGXXXXXXEETMKVNRSELDKLLNLQAVREREFP 384
G +EG +GRK+LK +GDTV++G+VK+YNPP G + ESWT+ ++ K+ D G D +G +E +V+R ELDK LNLQAV EREFP
Sbjct: 9 GGGSEGGRLVGRKILKRWGDTVISGYVKDYNPPVDG-KQESWTLRHE---KNFDGG----DVEGDNSVGEDE--EVDRPELDKRLNLQAVMEREFP 94
BLAST of mRNA_P-fluviatile_contig2.3781.1 vs. uniprot
Match: A0A6H5JIC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIC1_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 1.620e-12 Identity = 48/97 (49.48%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 97 GVATEGEGFIGRKLLKGYGDTVVNGFVKEYNPPAGGGEPESWTISYDAPYKDLDAGSRGCDD-DGXXXXXXEETMKVNRSELDKLLNLQAVREREFP 384
G +EG +GRK+LK GDTVV+G+VK+YNPP G + ESWT+ ++ + CDD DG E V+R ELDK LNLQAV EREFP
Sbjct: 13 GGGSEGGRLVGRKILKRSGDTVVSGYVKDYNPPVDG-KQESWTLRHE----------KKCDDGDGEGNNSGGEDEVVDRPELDKQLNLQAVMEREFP 98 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig2.3781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig2.3781.1 >prot_P-fluviatile_contig2.3781.1 ID=prot_P-fluviatile_contig2.3781.1|Name=mRNA_P-fluviatile_contig2.3781.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=371bp MKVNRSELDKLLNLQAVREREFPKGSGKKGRGRGARKTDSAPSSTNGAAAback to top mRNA from alignment at P-fluviatile_contig2:1111576..1122824- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig2.3781.1 ID=mRNA_P-fluviatile_contig2.3781.1|Name=mRNA_P-fluviatile_contig2.3781.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11249bp|location=Sequence derived from alignment at P-fluviatile_contig2:1111576..1122824- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig2:1111576..1122824- >mRNA_P-fluviatile_contig2.3781.1 ID=mRNA_P-fluviatile_contig2.3781.1|Name=mRNA_P-fluviatile_contig2.3781.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2226bp|location=Sequence derived from alignment at P-fluviatile_contig2:1111576..1122824- (Porterinema fluviatile SAG_2381)back to top |