mRNA_P-fluviatile_contig19.3636.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig19.3636.1
Unique NamemRNA_P-fluviatile_contig19.3636.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig19.3636.1 vs. uniprot
Match: D7G3D2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D2_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 2.980e-52
Identity = 92/111 (82.88%), Postives = 102/111 (91.89%), Query Frame = 2 
Query:  419 MTAGVDPANGLTELGLDQARTAGKELKEVLVRAGCSPANTIVLTSPFSRAKETAEAIRDCLECELREERDLRERFFGEFDGHDDAASYAKVWALDALSGHHGELGVEPAAQ 751
            M  GVDPANGLTELGL+QARTAGKELKEVL+ AGCSPANT+V+TSPFSRAKETAEAIR+CL+C+LREERDLRER+FGE DG +D ASYAKVWALDA+S  HGELGVEPA Q
Sbjct:    1 MEEGVDPANGLTELGLEQARTAGKELKEVLLGAGCSPANTMVVTSPFSRAKETAEAIRECLDCDLREERDLRERYFGELDGREDHASYAKVWALDAVSARHGELGVEPATQ 111
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BLAST of mRNA_P-fluviatile_contig19.3636.1 vs. uniprot
Match: A0A6H5KCP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP6_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 4.490e-41
Identity = 90/155 (58.06%), Postives = 96/155 (61.94%), Query Frame = 2 
Query:  776 VHRARKEVSIRQRFYSGEDGQPFPPGPSAVILVSHGDALQVLQCALAGRPVEQHRSLPHLENCGIRVLRPPPLGAEG-----GEEEEDEGADRAVGQREEERGMEXXXXXXXXXXXXXXXRGDFGKDRSSGEAAGAFRMTGARVFRTPKGERSQG 1225
            + R RKE+SIRQR+YSG DGQPFPPGPSAV+LVSHGDALQ+LQCALAGRP EQHRSLPHLENCGIRVLRPPP G EG     G+ EEDEG  R V                                     AA AFRMTGARVFR P G    G
Sbjct:    1 MRRLRKEISIRQRYYSGADGQPFPPGPSAVVLVSHGDALQLLQCALAGRPAEQHRSLPHLENCGIRVLRPPP-GEEGVREARGDAEEDEGGCRGVE-----------------------------------AAAEAFRMTGARVFRAPAGGEDDG 119
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BLAST of mRNA_P-fluviatile_contig19.3636.1 vs. uniprot
Match: A0A7S3YGZ9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGZ9_HETAK)

HSP 1 Score: 149 bits (376), Expect = 2.450e-37
Identity = 93/210 (44.29%), Postives = 116/210 (55.24%), Query Frame = 2 
Query:  353 CTFFLVRHGQSRPNIAGKIVSGMTAGVDPANGLTELGLDQARTAGKELKEVLVRAGCSPA----NTIVLTSPFSRAKETAEAIRDCLECELREERDLRERFFGEFDGHDDAASYAKVWALDA--LSGHHGELGVEPAAQVAVRTAAVVHRARKEVSIRQRFYSGEDGQPFPPGPSAVILVSHGDALQVLQCALAGRPVEQHRSLPHLENC 964
            C  FLVRHGQS PN+ GKIVS +  G+   NGLT  G  QA  AG++L  +L+ +         + ++LTSPFSRAK+TAE I+  L C L    +LRER+FG  DG  D   Y  +WA DA  L+G     G E    VA RT +V   A     +    Y             AV+LVSHGDALQ+LQ AL  R +  HR+LPHL NC
Sbjct:   22 CRLFLVRHGQSYPNVHGKIVSSLQEGIKDENGLTSTGRSQAEEAGRQLFHILLGSNADHLIGKDDILILTSPFSRAKQTAEIIQQSLGCGLEVRSELRERWFGSLDGASDK-HYQDIWAQDAESLTGAETVFGAETLESVAQRTKSVAALADPANPVAAHRYR------------AVVLVSHGDALQILQTALLRRNLRAHRALPHLGNC 218
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BLAST of mRNA_P-fluviatile_contig19.3636.1 vs. uniprot
Match: A0A1H1ZZ96_9ACTN (Probable phosphoglycerate mutase n=2 Tax=Microlunatus soli TaxID=630515 RepID=A0A1H1ZZ96_9ACTN)

HSP 1 Score: 125 bits (313), Expect = 9.820e-29
Identity = 92/218 (42.20%), Postives = 118/218 (54.13%), Query Frame = 2 
Query:  329 DQSVLAHGCTFFLVRHGQSRPNIAGKIVSGMTAGVDPANGLTELGLDQARTAGKELKEVLVRAGCSPANTIVLTSPFSRAKETAEAIRDCLEC-ELREERDLRERFFGEFDGHDDAASYAKVWALDALSGHHGELGVEPAAQVAVRTAAVVHRARKEVSIRQRFYSGEDGQPFPPGPSAVILVSHGDALQVLQCALAGRPVEQHRSLPHLENCGIRVL 979
            D S L +  T  ++RH QSRPN+AG IV    AG+DPANGLTELG  QAR +         RAG      ++++S FSR  ETAE +R+      +R +R LRER FG FDG   A++Y +VWA DA        GVEP       T AV  R    ++  +R + G           A++LVSHGD  Q+ Q A AG PV  HR+LP L N  +R L
Sbjct:   23 DLSTLENSYT--VMRHAQSRPNVAGLIVCRAPAGLDPANGLTELGRRQARDSASSW--AAHRAG-DATPPVIISSDFSRTTETAEILREVTGAGPVRLDRRLRERDFGGFDGGP-ASAYDQVWARDAEDATAP--GVEP-------TGAVRDRVLSMITDLEREHRGR----------AIVLVSHGDTSQITQAAFAGLPVHTHRTLPPLGNAELRAL 215
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BLAST of mRNA_P-fluviatile_contig19.3636.1 vs. uniprot
Match: A0A257TF54_9BACT (Uncharacterized protein n=1 Tax=Parcubacteria group bacterium 21-54-25 TaxID=1970248 RepID=A0A257TF54_9BACT)

HSP 1 Score: 116 bits (291), Expect = 6.160e-26
Identity = 87/209 (41.63%), Postives = 115/209 (55.02%), Query Frame = 2 
Query:  359 FFLVRHGQSRPNIAGKIVSGMTAGVDPANGLTELGLDQARTAGKELKEVLVRAGCSPANTIVLTSPFSRAKETAEAIRDCLECEL-REERDLRERFFGEFDG-HDDAASYAKVWALDALSGHHGELGVEPAAQVAVRTAAVVHRARKEVSIRQRFYSGEDGQPFPPGPSAVILVSHGDALQVLQCALAGRPVEQHRSLPHLENCGIRVL 979
            +F +RHG S  N  G IVS  T GV    GL+E G  + R A +  KE     G   A+TIV++S F+RA+ETAE + D L+ ++      LRERFFG +DG H+D  +Y KVWA DA +  H   GVE         AAV+ RA K ++  ++ Y+G+           ++LVSHGD LQ+LQ A A    E HRSL  L    IR L
Sbjct:   29 YFAMRHGTSVANEEGVIVSDPTKGV-AGYGLSEKGRKEVRAAAQRAKET----GLLDAHTIVISSDFTRARETAEMLVDTLDLDMVTTTPKLRERFFGAWDGTHND--NYQKVWADDAHNATHTANGVES-------VAAVLDRATKLIAELEQNYAGKP----------IVLVSHGDTLQILQTAFADVSPETHRSLTPLHTAEIRKL 213
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BLAST of mRNA_P-fluviatile_contig19.3636.1 vs. uniprot
Match: UPI0004808E3B (histidine phosphatase family protein n=1 Tax=Enterovibrio calviensis TaxID=91359 RepID=UPI0004808E3B)

HSP 1 Score: 115 bits (289), Expect = 7.260e-26
Identity = 76/209 (36.36%), Postives = 113/209 (54.07%), Query Frame = 2 
Query:  356 TFFLVRHGQSRPNIAGKIVSGMTAGVDPANGLTELGLDQARTAGKELKEVLVRAGCSPANTIVLTSPFSRAKETAEAIRDCLEC-ELREERDLRERFFGEFDGHDDAASYAKVWALDALSGHHGELGVEPAAQVAVRTAAVVHRARKEVSIRQRFYSGEDGQPFPPGPSAVILVSHGDALQVLQCALAGRPVEQHRSLPHLENCGIRVL 979
            T+  +RHGQS+ N+A  +VS    G +   GL+  G  QA+TA ++ + + +        T + TS F R KETA  + D L   E +++  LRER+FGE++G    A Y +VW +DAL+ ++ E GVE  AQV  R  A++H    +       Y GE           ++LV+HGD LQ+L  A    P  +HR+LPH E   ++VL
Sbjct:    7 TYLAMRHGQSQANVANIVVSDPAIGCEQY-GLSPTGEQQAKTAAQQYQGMPI--------TQIFTSDFKRTKETAAIVADTLNMSEPQQDTRLRERYFGEWEGKTSDA-YEQVWTIDALTAYNNENGVESTAQVRARALALIHELDAK-------YQGE----------VILLVAHGDTLQILATAFNDLPPNKHRTLPHHETGELKVL 188
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BLAST of mRNA_P-fluviatile_contig19.3636.1 vs. uniprot
Match: A0A516Q0Q0_9ACTN (Histidine phosphatase family protein n=2 Tax=Microlunatus elymi TaxID=2596828 RepID=A0A516Q0Q0_9ACTN)

HSP 1 Score: 116 bits (290), Expect = 3.370e-25
Identity = 89/215 (41.40%), Postives = 115/215 (53.49%), Query Frame = 2 
Query:  356 TFFLVRHGQSRPNIAGKIVSGMTAGVDPANGLTELGLDQARTAGKELKEVLVRAGCSPANTIVLTSPFSRAKETAEAIR-----DCLECELREERDLRERFFGEFDGHDDAASYAKVWALDALSG--HHGELGVEPAAQVAVRTAAVVHRARKEVSIRQRFYSGEDGQPFPPGPSAVILVSHGDALQVLQCALAGRPVEQHRSLPHLENCGIRVL 979
            T+ ++RHGQS PN+AG IV    AG+DPANGLTELG  QAR A     E   R        ++++S F+RA ETAE +R     D +  ++R    LRER FG +DG    + Y +VWA DA     H    G+E  A V  RTA ++    KE+  R      +D Q        ++LVSHGD  Q+   A AG   +QHRSLP L N  IR L
Sbjct:   85 TYAVMRHGQSHPNVAGVIVCRPDAGIDPANGLTELGRQQARDAALLWTEDQDRP------PVIISSDFTRALETAEELRTITGADPVIIDVR----LRERDFGSYDGGP-VSGYDEVWAADAAGTCIH----GIESVADVLARTAELI----KELDARY-----QDQQ--------IVLVSHGDTAQITIAAFAGVRPDQHRSLPGLGNAEIRPL 267
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BLAST of mRNA_P-fluviatile_contig19.3636.1 vs. uniprot
Match: UPI00166A5D18 (histidine phosphatase family protein n=1 Tax=Halomonas lutescens TaxID=1602943 RepID=UPI00166A5D18)

HSP 1 Score: 111 bits (278), Expect = 2.160e-24
Identity = 81/207 (39.13%), Postives = 107/207 (51.69%), Query Frame = 2 
Query:  359 FFLVRHGQSRPNIAGKIVSGMTAGVDPANGLTELGLDQARTAGKELKEVLVRAGCSPANTIVLTSPFSRAKETAEAIRDCLECELREERDLRERFFGEFDGHDDAASYAKVWALDALSGHHGELGVEPAAQVAVRTAAVVHRARKEVSIRQRFYSGEDGQPFPPGPSAVILVSHGDALQVLQCALAGRPVEQHRSLPHLENCGIRVL 979
            + L+RHG S+ N  GKI+S       P  GLT  GL +     ++L +VL +    PA T V+ S F R   TA  +       + +E  LRER FGE DG  D   Y  VWA DA S  H +  VEP ++VA R  AV+       ++ QRF +GE           V++VSHGD LQ+L  ALAGRP+ QHR  P L    I ++
Sbjct:   16 YLLMRHGHSQANAQGKIIS------SPERGLTSYGLSEQ--GEQQLVDVLAQWSW-PAPTQVVHSDFLRTTNTAARVAAAFGLSMTQEVRLRERHFGELDGQADH-HYPDVWAFDAQSAEHAQWQVEPVSRVAARMCAVLE------ALEQRF-TGE----------TVLVVSHGDPLQILLAALAGRPLTQHREQPALLPASITLV 195
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BLAST of mRNA_P-fluviatile_contig19.3636.1 vs. uniprot
Match: A0A087SJE8_AUXPR (Putative phosphoglycerate mutase GpmB n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SJE8_AUXPR)

HSP 1 Score: 109 bits (272), Expect = 2.610e-23
Identity = 91/242 (37.60%), Postives = 120/242 (49.59%), Query Frame = 2 
Query:  356 TFFLVRHGQSRPNIAGKIVSGMTAGVDPANGLTELGLDQARTAGKELKEVLVRAGCSPANTIVLTSPFSRAKETAEAIRDCL----------ECELREERDLRERFFGEFDGHDDAASYAKVWALDALSGHHGELGV-EPAAQVAVRTAAVVHRARKEVSIRQRFYSGEDGQPFPPGPSAVILVSHGDALQVLQCALAGRPVEQHRSLPHLENCGIRVLRPPPLGAEGGEEEEDEGADRAVG 1048
            T++LVRHG S  N AGKIVS + AG     GL++LG  QA  AG  L+E   R G  P   +VL SPFSR  +TA+ I + L          + + +   +LRER FG  DG  DA SY   W+ DA    +   G  E  A+VA R  +++ R   E S R                 +VILV+HGD++ +L  A+ G  +  HR    LENCG+  L P      GGE    + AD A G
Sbjct:    6 TYYLVRHGNSLANQAGKIVSTLEAGTLEEWGLSDLGKQQAHAAGDTLRE---RLGQQPQAPLVLASPFSRTLQTAQLIVERLGHDVAVQVQAQNQAQPAPELRERDFGALDGGSDA-SYLAEWSRDAEDTDYKAGGTGESVAEVARRATSLLRRLEDEHSGR-----------------SVILVAHGDSISILAAAVLGPGLAHHRQYA-LENCGVLCLGP------GGEGPSGQQADPAPG 219
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BLAST of mRNA_P-fluviatile_contig19.3636.1 vs. uniprot
Match: Z9JPC2_9MICO (Fructose 1,6-bisphosphatase n=1 Tax=Brachybacterium phenoliresistens TaxID=396014 RepID=Z9JPC2_9MICO)

HSP 1 Score: 109 bits (272), Expect = 3.030e-23
Identity = 79/208 (37.98%), Postives = 105/208 (50.48%), Query Frame = 2 
Query:  362 FLVRHGQSRPNIAGKIVSGMTAGVDPANGLTELGLDQARTAGKELKEVLVRAGCS-PANTIVLTSPFSRAKETAEAIRDCL-ECELREERDLRERFFGEFDGHDDAASYAKVWALDALSGHHGELGVEPAAQVAVRTAAVVHRARKEVSIRQRFYSGEDGQPFPPGPSAVILVSHGDALQVLQCALAGRPVEQHRSLPHLENCGIRVL 979
            F++RHG+S  N+ G IVS          GLT LG +QAR AG         AG    A+ +++TS F+RA +TA      +   E   +  LRER FG FD    A +Y  +WA DA   H GE GVE   +VA R  AV+  AR                   PG + V+LV+HGD LQ+L    +GRP  +HR+L HL N  +R +
Sbjct:    5 FVLRHGESTANVEGLIVSRPGRRALSEVGLTALGREQARAAG---------AGSGLGADAVIVTSDFARAAQTAAEFAAAIGAAEPVVDVRLRERCFGTFD-EGPATAYDGIWAADASGAHPGE-GVESVEEVAARAMAVLEEARAR-----------------PGQAPVVLVAHGDVLQILLAVASGRPAREHRALAHLGNAELREI 184
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig19.3636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3D2_ECTSI2.980e-5282.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCP6_9PHAE4.490e-4158.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3YGZ9_HETAK2.450e-3744.29Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1H1ZZ96_9ACTN9.820e-2942.20Probable phosphoglycerate mutase n=2 Tax=Microluna... [more]
A0A257TF54_9BACT6.160e-2641.63Uncharacterized protein n=1 Tax=Parcubacteria grou... [more]
UPI0004808E3B7.260e-2636.36histidine phosphatase family protein n=1 Tax=Enter... [more]
A0A516Q0Q0_9ACTN3.370e-2541.40Histidine phosphatase family protein n=2 Tax=Micro... [more]
UPI00166A5D182.160e-2439.13histidine phosphatase family protein n=1 Tax=Halom... [more]
A0A087SJE8_AUXPR2.610e-2337.60Putative phosphoglycerate mutase GpmB n=3 Tax=Auxe... [more]
Z9JPC2_9MICO3.030e-2337.98Fructose 1,6-bisphosphatase n=1 Tax=Brachybacteriu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig19contigP-fluviatile_contig19:2534421..2538545 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score113.2
Seed ortholog evalue2.7e-22
Seed eggNOG ortholog3075.A0A087SJE8
EggNOG free text desc.Phosphoglycerate mutase family
EggNOG OGs28K5R@1,2QSKC@2759,34M9S@3041,37PYJ@33090
COG Functional cat.S
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionHistidine phosphatase superfamily, clade-1
Ec32 orthologEc-21_002400.1
Exons5
Model size2326
Cds size1182
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815813.5347824-UTR-P-fluviatile_contig19:2534420..25354611622815813.5347824-UTR-P-fluviatile_contig19:2534420..2535461Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 2534421..2535461 -
1693563411.300978-UTR-P-fluviatile_contig19:2534420..25354611693563411.300978-UTR-P-fluviatile_contig19:2534420..2535461Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 2534421..2535461 -
1622815813.6168177-UTR-P-fluviatile_contig19:2538442..25385451622815813.6168177-UTR-P-fluviatile_contig19:2538442..2538545Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 2538443..2538545 -
1693563412.0584002-UTR-P-fluviatile_contig19:2538442..25385451693563412.0584002-UTR-P-fluviatile_contig19:2538442..2538545Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 2538443..2538545 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815813.5496335-CDS-P-fluviatile_contig19:2535461..25359951622815813.5496335-CDS-P-fluviatile_contig19:2535461..2535995Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 2535462..2535995 -
1693563411.9855022-CDS-P-fluviatile_contig19:2535461..25359951693563411.9855022-CDS-P-fluviatile_contig19:2535461..2535995Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 2535462..2535995 -
1622815813.5659056-CDS-P-fluviatile_contig19:2536159..25362861622815813.5659056-CDS-P-fluviatile_contig19:2536159..2536286Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 2536160..2536286 -
1693563412.0045133-CDS-P-fluviatile_contig19:2536159..25362861693563412.0045133-CDS-P-fluviatile_contig19:2536159..2536286Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 2536160..2536286 -
1622815813.579809-CDS-P-fluviatile_contig19:2536924..25370071622815813.579809-CDS-P-fluviatile_contig19:2536924..2537007Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 2536925..2537007 -
1693563412.022842-CDS-P-fluviatile_contig19:2536924..25370071693563412.022842-CDS-P-fluviatile_contig19:2536924..2537007Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 2536925..2537007 -
1622815813.5928986-CDS-P-fluviatile_contig19:2537376..25375431622815813.5928986-CDS-P-fluviatile_contig19:2537376..2537543Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 2537377..2537543 -
1693563412.0333228-CDS-P-fluviatile_contig19:2537376..25375431693563412.0333228-CDS-P-fluviatile_contig19:2537376..2537543Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 2537377..2537543 -
1622815813.6059608-CDS-P-fluviatile_contig19:2538171..25384421622815813.6059608-CDS-P-fluviatile_contig19:2538171..2538442Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 2538172..2538442 -
1693563412.0435123-CDS-P-fluviatile_contig19:2538171..25384421693563412.0435123-CDS-P-fluviatile_contig19:2538171..2538442Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 2538172..2538442 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig19.3636.1prot_P-fluviatile_contig19.3636.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig19 2535462..2538442 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig19.3636.1

>prot_P-fluviatile_contig19.3636.1 ID=prot_P-fluviatile_contig19.3636.1|Name=mRNA_P-fluviatile_contig19.3636.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=394bp
MIRLASRVGLLLVLGLLLLIAIAATSLPRGPNPPSLPTTLAPGTTRAVSQ
AAQEPSVVAATARAADEEDASVLSSDQSVLAHGCTFFLVRHGQSRPNIAG
KIVSGMTAGVDPANGLTELGLDQARTAGKELKEVLVRAGCSPANTIVLTS
PFSRAKETAEAIRDCLECELREERDLRERFFGEFDGHDDAASYAKVWALD
ALSGHHGELGVEPAAQVAVRTAAVVHRARKEVSIRQRFYSGEDGQPFPPG
PSAVILVSHGDALQVLQCALAGRPVEQHRSLPHLENCGIRVLRPPPLGAE
GGEEEEDEGADRAVGQREEERGMEERGADGDGGGSHGGGRGDFGKDRSSG
EAAGAFRMTGARVFRTPKGERSQGTGGGRGSSDGDGDGKDGQE*
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mRNA from alignment at P-fluviatile_contig19:2534421..2538545-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig19.3636.1 ID=mRNA_P-fluviatile_contig19.3636.1|Name=mRNA_P-fluviatile_contig19.3636.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4125bp|location=Sequence derived from alignment at P-fluviatile_contig19:2534421..2538545- (Porterinema fluviatile SAG_2381)
TAGGAGTGATCTTGAGTGGAAAGGAATGAGGCAGTAGATAGACTGCGACG
ACTTTCGTCCGCGCCGCAGCACTGGTGTATGCCGGTGCCCGTCTGTGTGG
AACATGATCCGGCTCGCTTCTCGCGTAGGTCTGCTCCTTGTGCTAGGGTT
ACTGCTGCTCATCGCCATCGCGGCCACAAGCCTCCCGCGCGGACCAAATC
CCCCCTCATTACCCACAACTCTGGCCCCGGGCACTACAAGAGCTGTATCG
CAGGCAGCACAAGAGCCGTCAGTGGTGGCAGCAACGGCGAGAGCCGCCGA
TGAAGAAGACGCGAGCGTGTTGTCGTCCGACCAATCGGTCCTCGCTCATG
GCTGCACGTTCTTCCTGGTTCGACGTGAGTCTGTACGGAGCTAACAGTGT
TTCTTCTCTGCCTCCGTTTAATGTATGTCTTTTCCCCTCTGGCCTTTGAT
TCCAGACTATCACCCAGGGACGGTGTGGTGGGGTGTAGGCGAAGGGAGTG
TGGGCGGCAACCTTACAAAAATGTTCAACGCTCGAAAATTTCAGAGCTTA
CCGCGCTTCGAGCGATGATTGCTAGAGCGGTAGGCAAAGTTGCCTGTGAA
AGTGCCATTCTGCCCCTACTATTTCGTGGCAACGGATGAATAAACGAAGT
TCGCGCTGTCACCCGCCCGGCTTGACACACTGGATTCGGACTTGGCGCGA
GTGTCTCGATCGATCGGCTTGCTGCAACTCTGCAAGGACCCGTCACCTGA
GTGAAAGAGTTGCTTCAATACATACGCTAGTTATTACAGCAAATGCGACC
GTCTCGATTCTGCGACGATTGAGCAAAAGCTGCTACTTGCCACCCTCAAC
CGTTCTCGGTCTCTCCTCTCTCTCCTCCCGTCCATGCTCGTCGTTTCGCA
ACCCTTCACCCCTGCCGCCCACCCCCCGCCTGATCCTTCCTCTCCCTTTC
CGCGCCATCCGCGCCATATACGGGGTGGCCGTTGGGCAACCCTTCCTTGC
AGACGGACAGAGCCGCCCGAACATTGCGGGCAAGATCGTTTCCGGGATGA
CGGCAGGGGTCGACCCGGCCAATGGGTTGACGGAGCTGGGGCTAGATCAG
GCGCGTACTGCGGGCAAGGAGCTCAAGGAAGTGCTAGTGAGAGCCGGCTG
CTCGCCGGCGAATACGATTGTGAGCATCTAATACAGTACTGCAAACGCCT
TGGTGCCCGTCGTTTAGGGCAACATTCACCGGACTACCGTAACACCATCC
GTTGGCTTGAACGTAGTTCGGTGGTCATCGTGCTTCGAAATACACCTGGC
GCGCTCATTTGGCTTCGGCGCTCGTATTCCCCTGCAGACGGGCGTTTCCC
ATTCATGCATTCATCGCTGTTACCGTTGTTGTTTGAATCCATGCGTCCTG
CGAGGAGGGCCGAAGGCCGTTCGGCAACATACGGGAGGCGTGATGCCTCT
CACTTTCCGACTTGGCGCGTTCTGACGCCTGCGGCATGCGTGATCGCGAG
CCATCGTGCGAAACGTGCTCGCTTCCTGCCGCGAACAGGTGCTGACCTCG
CCTTTCTCGAGGGCGAAGGAGACGGCGGAAGCGATCCGAGATTGCCTCGA
ATGCGAGTTGCGAGAAGAAAGGTATTCGCATCTTGCCGACGTTGCCGACG
GTAACGTGAATTGCTGGATCCTTGACTTTTTTTTCCCGGGCGGCTTCCTC
TTTATTTTTTCGTCCACTTTTTTCTCGGCTTCGAGAAGGACCGTCAATAC
GAAGGCCACGATTTTCGATTTTGTGAATCATCGGGTAGATACTCATCTAG
ACAAGGATTTGGAGCTTTTACATCTGTGCCCGGCTTTTTGAGCGCCGGCG
TATCCCTCAGCGCGGGGGAGTGATCCCGCGAGAATTATCGGAGCCCCGCC
GACGGGCGATTGCATGGCCGCGCTCACAGCAGGAGCAATGACGTTTGGGA
CGACGGGGGCATAACCGCTCCGCGGAGATAAGCGTGATGGAATCAGAACC
TGGGCCGAGTGTTGCAGAACATCCAATCGCGTGTGCCCGATCTTTCGACC
TTGTGTCTTCGGTGGATCGGACACGTCGGAAGGGCAACGCTTCCAAAACA
CCTCTTACTCACACCGTATCCTTCGGTTCACGCTCTCCCCCCCCTCCCCC
GCCCCCCCCTCAACACTTTCCCTATTTCCCGCCCTCCCTCGCTTTCCTTT
CTCTCACCCCGTGTCATCCCCCCTTCATGCCCGCCCACTCTCGCGCCACG
CTACACTAGAGATCTCCGGGAGCGTTTTTTTGGAGAATTCGACGGCCACG
ATGACGCTGCGAGCTACGCGAAAGTCTGGGCCCTCGACGCCCTCAGCGGC
CACCACGGCGAGCTCGGAGTGGAGCCGGCTGCCCAGGTATTTTACATCTT
CCCCCCAACAAGTCATAGTCTGCGTCTTTGGGTATCTTTAAACGCGGGTC
TCGAATTTCTTTGCCGTTTGTCTGTACTTCCAGGCCGACCCCGATCGCAT
GGTTCCTCGAAGTGACTGGCATGACCTGACCTCCTTCCTCGCCGGCGCAG
GTTGCTGTTCGCACGGCGGCGGTTGTGCACCGTGCGAGGAAGGAGGTCTC
CATCCGCCAGCGATTTTACTCCGGGGAAGACGGGCAGCCCTTCCCTCCCG
GCCCGAGCGCCGTGATCTTGGTCAGCCACGGCGACGCCCTGCAGGTGTTG
CAGTGCGCCCTCGCCGGGCGCCCTGTGGAGCAGCACCGGTCGCTACCGCA
CCTCGAGAACTGCGGGATCCGAGTCTTGCGGCCGCCGCCCCTTGGGGCAG
AGGGGGGTGAGGAGGAGGAAGATGAGGGGGCGGATAGAGCCGTGGGGCAA
CGAGAAGAGGAAAGGGGGATGGAAGAACGGGGTGCTGATGGCGATGGTGG
TGGCAGTCACGGTGGCGGTCGCGGTGACTTCGGTAAGGACAGGTCAAGCG
GCGAGGCAGCGGGAGCGTTCAGAATGACCGGGGCTCGCGTGTTCAGGACG
CCGAAAGGGGAGAGAAGCCAGGGGACGGGCGGCGGTCGCGGCAGCAGCGA
CGGAGACGGCGACGGCAAGGACGGGCAGGAGTAGCAGTAGTTGGATGTCG
ACACATTTTCGCCGACGGTGAAGATGTGCTCACATGTCTCGGGGTCCGTT
GTCCCGGTGTGTTGAGTTCGGGCTCGTGCACATTTACTTCATAGCATAAC
CGACGTCGAAGCTAAGGTCTCCATTTGTACAAGATGTCGAGGCTTTCGCC
AGGGTGCAGGCCCGATTTTCTGCCGTCGATATTGTCTTTCAGAAATCGGA
GACGAGGGAGAAATGTGGAAACTGCCGCTCGTACTTGCGCCCCCCCGCGA
ACAACGCTTGTGGAAGACGGGTGATGTCGTACATGTTTATAAAACCCTGT
CGTGTCGGCGACTTCCATTTTAGCCCCATTCCTTGTCCGTATCTGCCGAA
CGCGTGCTAGCTACCACGCTGTGCGACGGTGGCTGGCTTGAGCGGGGGGT
ACGGTAGCGTCGGCACCGGCGGCGATGAAAGCACCGATAGTATCTGCTTT
GGTCTTTTCCATTGTCTGGATTTCTTACTCACGAGTTGCGGCGCTTGTCG
TACTTATTGTGGTAGATCAGGCAGAGGTGGTAGACCATAGCGAGGGTGGA
CCGAACGAGCCGAAATGCAACGCCGGTATCTGATGAGCTGTCTGGGGGTC
TGCTTCTGGACGTGCGCGGAAGGGAGAGAGGGGTTTCGGTAGCCCGACGC
ATTGGTGCACAAGGTCGGTTGTTCATTCCGTCCTCGGTTGCATTTGGCGG
GGCACCAGGACCGCAGTTGTTGTTCGAGGGCGCTTGATATATTTTGCTTG
TACATCTCTGGGATTGTTCGTTATACTCCATGCCTCCGTGGGGGTAAACT
TGTCTGAGAGTCATCGTCAATGTTTGGTAGGGATAGGGCGAAAACGTGCG
TTTAGTGTGAAAATATGAGCATGACTAACATGTATCCTTGTCCATTAGCT
GGTGTTTTGGTAGGCGTTAATCTTTGAAGGAAGCTCGTGTGACCCACAGA
GATGCTCCGAGTCTACAGCGGCTTTTCCTCTAAGAACGGCAGTCACCGAG
TAACCAAAGCTAAGAGCAACATCCC
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Coding sequence (CDS) from alignment at P-fluviatile_contig19:2534421..2538545-

>mRNA_P-fluviatile_contig19.3636.1 ID=mRNA_P-fluviatile_contig19.3636.1|Name=mRNA_P-fluviatile_contig19.3636.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2364bp|location=Sequence derived from alignment at P-fluviatile_contig19:2534421..2538545- (Porterinema fluviatile SAG_2381)
ATGATCCGGCTCGCTTCTCGCGTAGGTCTGCTCCTTGTGCTAGGGTTACT
GCTGCTCATCGCCATCGCGGCCACAAGCCTCCCGCGCGGACCAAATCCCC
CCTCATTACCCACAACTCTGGCCCCGGGCACTACAAGAGCTGTATCGCAG
GCAGCACAAGAGCCGTCAGTGGTGGCAGCAACGGCGAGAGCCGCCGATGA
AGAAGACGCGAGCGTGTTGTCGTCCGACCAATCGGTCCTCGCTCATGGCT
GCACGTTCTTCCTGGTTCGACATGATCCGGCTCGCTTCTCGCGTAGGTCT
GCTCCTTGTGCTAGGGTTACTGCTGCTCATCGCCATCGCGGCCACAAGCC
TCCCGCGCGGACCAAATCCCCCCTCATTACCCACAACTCTGGCCCCGGGC
ACTACAAGAGCTGTATCGCAGGCAGCACAAGAGCCGTCAGTGGTGGCAGC
AACGGCGAGAGCCGCCGATGAAGAAGACGCGAGCGTGTTGTCGTCCGACC
AATCGGTCCTCGCTCATGGCTGCACGTTCTTCCTGGTTCGACACGGACAG
AGCCGCCCGAACATTGCGGGCAAGATCGTTTCCGGGATGACGGCAGGGGT
CGACCCGGCCAATGGGTTGACGGAGCTGGGGCTAGATCAGGCGCGTACTG
CGGGCAAGGAGCTCAAGGAAGTGCTAGTGAGAGCCGGCTGCTCGCCGGCG
AATACGATTACGGACAGAGCCGCCCGAACATTGCGGGCAAGATCGTTTCC
GGGATGACGGCAGGGGTCGACCCGGCCAATGGGTTGACGGAGCTGGGGCT
AGATCAGGCGCGTACTGCGGGCAAGGAGCTCAAGGAAGTGCTAGTGAGAG
CCGGCTGCTCGCCGGCGAATACGATTGTGCTGACCTCGCCTTTCTCGAGG
GCGAAGGAGACGGCGGAAGCGATCCGAGATTGCCTCGAATGCGAGTTGCG
AGAAGAAAGGTGCTGACCTCGCCTTTCTCGAGGGCGAAGGAGACGGCGGA
AGCGATCCGAGATTGCCTCGAATGCGAGTTGCGAGAAGAAAGAGATCTCC
GGGAGCGTTTTTTTGGAGAATTCGACGGCCACGATGACGCTGCGAGCTAC
GCGAAAGTCTGGGCCCTCGACGCCCTCAGCGGCCACCACGGCGAGCTCGG
AGTGGAGCCGGCTGCCCAGAGATCTCCGGGAGCGTTTTTTTGGAGAATTC
GACGGCCACGATGACGCTGCGAGCTACGCGAAAGTCTGGGCCCTCGACGC
CCTCAGCGGCCACCACGGCGAGCTCGGAGTGGAGCCGGCTGCCCAGGTTG
CTGTTCGCACGGCGGCGGTTGTGCACCGTGCGAGGAAGGAGGTCTCCATC
CGCCAGCGATTTTACTCCGGGGAAGACGGGCAGCCCTTCCCTCCCGGCCC
GAGCGCCGTGATCTTGGTCAGCCACGGCGACGCCCTGCAGGTGTTGCAGT
GCGCCCTCGCCGGGCGCCCTGTGGAGCAGCACCGGTCGCTACCGCACCTC
GAGAACTGCGGGATCCGAGTCTTGCGGCCGCCGCCCCTTGGGGCAGAGGG
GGGTGAGGAGGAGGAAGATGAGGGGGCGGATAGAGCCGTGGGGCAACGAG
AAGAGGAAAGGGGGATGGAAGAACGGGGTGCTGATGGCGATGGTGGTGGC
AGTCACGGTGGCGGTCGCGGTGACTTCGGTAAGGACAGGTCAAGCGGCGA
GGCAGCGGGAGCGTTCAGAATGACCGGGGCTCGCGTGTTCAGGACGCCGA
AAGGGGAGAGAAGCCAGGGGACGGGCGGCGGTCGCGGCAGCAGCGACGGA
GACGGCGACGGCAAGGACGGGCAGGAGTAGGTTGCTGTTCGCACGGCGGC
GGTTGTGCACCGTGCGAGGAAGGAGGTCTCCATCCGCCAGCGATTTTACT
CCGGGGAAGACGGGCAGCCCTTCCCTCCCGGCCCGAGCGCCGTGATCTTG
GTCAGCCACGGCGACGCCCTGCAGGTGTTGCAGTGCGCCCTCGCCGGGCG
CCCTGTGGAGCAGCACCGGTCGCTACCGCACCTCGAGAACTGCGGGATCC
GAGTCTTGCGGCCGCCGCCCCTTGGGGCAGAGGGGGGTGAGGAGGAGGAA
GATGAGGGGGCGGATAGAGCCGTGGGGCAACGAGAAGAGGAAAGGGGGAT
GGAAGAACGGGGTGCTGATGGCGATGGTGGTGGCAGTCACGGTGGCGGTC
GCGGTGACTTCGGTAAGGACAGGTCAAGCGGCGAGGCAGCGGGAGCGTTC
AGAATGACCGGGGCTCGCGTGTTCAGGACGCCGAAAGGGGAGAGAAGCCA
GGGGACGGGCGGCGGTCGCGGCAGCAGCGACGGAGACGGCGACGGCAAGG
ACGGGCAGGAGTAG
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