mRNA_P-fluviatile_contig19.3632.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig19.3632.1 vs. uniprot
Match: D7G3L4_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L4_ECTSI) HSP 1 Score: 689 bits (1779), Expect = 1.940e-212 Identity = 678/1520 (44.61%), Postives = 801/1520 (52.70%), Query Frame = 3
Query: 237 SPRPVLRDRSNEERLTTKSLIRGFIDQRETKQQQNTSHSLTVENGDPGAVVGADDGAAATSAA------AIEIVTPEPLQP------------SAGTLASPRETGFEVQKKQIQNEASTRSSVDSARRRLQXXXTGARADVARXXXXXXXXPVACTLVAFEPGSLGLELEPIVDEEAKRTRQQQRRQHQEQHGRGREPTQHRRPRRLGCRVFRVTPEGQAARHGSIHPGDALAVLDGVDVMSANFEDVTRTLLERQGRRRLLGFLGAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPQPPAGDSVT-ESRARSVPQALGSSATRKVSSLQGDGXXXXXXDSVAVPNTSPAGGSIAADGRETEKRDDLGRRKQRLGRESVGGCVGGGDAGIKCEAGDRSSATMVTTNGGAEDNAGGAYFEGDKAGKNGRPTVTAAAAAIRGVAGASSAVGG-PRRGRSFSFASLPS-SSRSGSSSAFELGRWAVETLPHPHDAKM-LSRSAERGGTPAASR---AHDRAAXXXXXXXXXXXXXXRRHGDGGPIPDVRHVDGGSTVPRMSEEGASDSAKPAAGTAFIRADDTEAAAARGKMLGSSWDSAAA----GSTSAGGCLAAGAYRQGRLFDRSRGESLQRSLAEAMEEKCALAAERAWLLEELQRVREEMLERDGALAGHEVQADVLRMEVGALEGELRRAREELAACEAGRKELQEATERDFARRDREAADLSAALRRERLARDRXXXXXXXXXXXXVDXXXXXXXXXXXXXR------RRGEVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQREEEISALLLRVGALESRLRGAAEDKEGQLRREVETVAIKSLEAAEQRRAELEEKASALATRLRQREAEGILRDRLVKDLERRIGRVQERAANVQEKDKTELLKLTGDLEATRKALSDREARARVEEGRLSRRLRDEECKVGVVSARLRTLEQRARFLETGAAAARQRAEAGMRKEREMSSRLAEAETARACQEVAVTTLKAQLEELRRGAAAGDAALREAAKLKKMLEGALVLHAKVSPLPPPTDTKGGDAAVAAGGGAEAGAGAARGXXXXXGLAGLAELVERLLRRAEGYRRDLXXXXXXXXXXXXXXXXXXXXXXHASELRSLLKQKRRVSAQVARGAEAARXXXXXXXXXXXRVRSEGVSLRAELETARKQMEGHGDMAERLQATVAELRRDIFPQALTDRASKAEAAAARASGDLSAANGMVSSLENAVGAAEAENADILRRLTRKDGDYVALYSRLEGTMAELDAVKATLVNVRENRVSTPAGVVSGAKSRGDXXXXXXXXMTEAEAVARLAPEAVAAGQAETAALGGKHADALEDSRRKMKKRRARSDLACVRLRTRMCGARVLSGVLDKWAARRSARAFWRLRVRESEEIKSEQVSGGATPPCARCETSGDDYDRIYGGYDRCNGGGDLAKLTIQAPTHMIHSGGDGSGGDGWVSPWGSPLDGDAGDGSRGRRWPRSA 4691
SPR VLRD SNEE TKSLI+GF+ KQ+ +S I+TPEP Q S+G S G + +A ++ + T A PVACTLVAFEPGSLGLELE IVD++ R H E++ P RRLGCRVFRVTP+GQAARHGS+HPGDAL VLDGVDV+S FED+TR LL+RQGRRRL+GF+G AAV P P + S+T E + P A G + XXXXXX G+ G+ A R G A +A+G PRR RS SFASLP S ++A +L E LPHP DA + R G+ R +D + G+ R E G S G A + A + LGSSW S A G+ +AGG A G +GR D SRGESLQRSLAEAME+K ALAAER WLLEELQR RE LERDGALAG EVQ DVL+MEV AL+GELRRAR+EL ACEAGR+EL EA +RD ARRDR+AADLS ALR RDRX X XXX XXXXXXX RR E E XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXX EEISALLLRVGA ESR R +EDK +LR EVE A+KSLEAAE+RRAE E KASA+A RLR+REAEG +DR+VKDLE R+GR + + VQE++ +EL ++ G+LE RKALSDREARAR E GRL RRLR+EE K +A LR LEQ A+FLETG AARQRAEA RKE+E+S RLAEAET RACQE+AVTTLKAQLEELRRGAAAGDAALREAAKL+ +LEGA + H P+ K G GG +G + XXXXX GL EL ++L R + ++L A+ELRSLL+QKR VSA++A GAEAAR ++ ++ VSLRAEL+ AR+Q E +G+ A+ L+ V ELR +I +A+ + S AEAA A+A + A VSSLE A+ AAEAE AD++RRL RKDGD VAL SRLE T++EL+AVK LV N V SG + R + E A A +A A AA Q + L +HA+A E+SR ARS+LACV LRTRMCGARVLSGV KWAARR+ARAFWRLR S S ++GG CARC +G G DR A LTI+APT W SPL G G GR PRSA
Sbjct: 5 SPRSVLRDISNEEGFATKSLIQGFLQPSVRKQKYTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAPIITPEPSQAETSNPAACSDGVSSGAWRSTTAVGA------VAPDAGGNTAAAAVAGTTPPLRTRHPAPPPLDQTRHRPPPVACTLVAFEPGSLGLELEAIVDDDKARR-------HGEEYRXXXRPR-----RRLGCRVFRVTPDGQAARHGSVHPGDALVVLDGVDVLSDPFEDITRALLQRQGRRRLIGFMGVAAVAASAPQKRRA------------------------PSPSSFSSLTAEPEVAASPPARGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDFGK-----------GGVVLPANGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGRVHDHNGEVPAPTALGHHPRRSRSSSFASLPPPGSELFGAAAADLDWREAERLPHPRDAAARIQRRRPAAGSMTGCRRVEGNDDLSMKNKRRVSSTVSSTAGLGEAAXXXXXXXXXXEGDARREPERGRSGVPAGYGGGARL---------ASRESLGSSWGSCATTGRMGAATAGGRAAGGGLYRGRPLDGSRGESLQRSLAEAMEDKRALAAERDWLLEELQRAREATLERDGALAGQEVQTDVLKMEVAALDGELRRARQELGACEAGRRELHEAAKRDLARRDRDAADLSDALRXXXXXRDRXADAAAAAAATXXXXXXADKXXXXXXXXXXXXXXRRAESTEXXXXXXXXXXXXXXXXXXXXXXXXXXXLRREXXXXXXXXXXXX----EEISALLLRVGASESRSRRLSEDKAERLR-EVEEAAVKSLEAAERRRAEWENKASAIAARLREREAEGTRKDRVVKDLEGRLGRAHAQTSEVQEREGSELRRVAGELEVMRKALSDREARAREETGRLERRLREEEKKACKNTAGLRKLEQHAKFLETGVVAARQRAEAAARKEKEVSERLAEAETERACQEIAVTTLKAQLEELRRGAAAGDAALREAAKLRNILEGAALRHMGTQPVVAADCGKSGRRDDTTSGGGSSG----KNXXXXXXGEGLVELAKKLQGRTDELDQELDSVRKALAMGREENQALLAREKDAAELRSLLEQKRGVSARLASGAEAARARAERAESQAEKMVADRVSLRAELKAARQQAETNGERAKGLEENVLELRDEI--RAMAAKLSDAEAAGAKARTGIDTATCRVSSLEKAMDAAEAERADVVRRLIRKDGDLVALQSRLEETVSELEAVKLALVEGSSNSVGDGG---SGGRGRVPGEAGVQAALREGVAGAHVA--AAAAAQTKANELKRQHAEAQEESRL------ARSELACVHLRTRMCGARVLSGVFHKWAARRAARAFWRLRT-TSTTGNSPAIAGGVVSSCARCGAAGTGRHGSLDGDDRSTS----AALTIEAPTXXXXXXXXXX----XXXXWTSPLSGYNQSGEGGRERPRSA 1431
BLAST of mRNA_P-fluviatile_contig19.3632.1 vs. uniprot
Match: A0A6H5L7S3_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7S3_9PHAE) HSP 1 Score: 672 bits (1733), Expect = 4.240e-205 Identity = 755/1673 (45.13%), Postives = 872/1673 (52.12%), Query Frame = 3
Query: 636 PVACTLVAFEPGSLGLELEPIVDEEAKRTRQQQRRQHQEQHGRGREPTQHRRPRRLGCRVFRVTPEGQAARHGSIHPGDALAVLDGVDVMSANFEDVTRTLLERQGRRRLLGFLGAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPQPPAGDSVTESRARSVPQALGSSATRKVSSLQGDGXXXXXXDSVAVPNTSPAGGSIAADGRETEKRDDLGRRKQRLGRE---------SVGGCVGGGDAGIKCEAGDRSSATMVTTNGGAEDNAGGAYFEGDKAGKNGRPTVTAAAAAIRGVAGASSAVGGPRRGRSFSFASLPS-SSRSGSSSAFELGRWAVETLPHPHDAKM-LSRSAERGGTPAASRAHDRAAXXXXXXXXXXXXXXRRHGDGGPIPDVRHVDGG--STVPRMSEEGASDSAKPAAGTAFIRADDTEAAAARGKMLGSSWDSAAA----GSTSAGGCLAAGAYRQGRLFDRSRGESLQRSLAEAMEEKCALAAERAWLLEELQRVREEMLERDGALAGHEVQADVLRMEVGALEGELRRAREELAACEAGRKELQEATERDFARRDREAADLSAALRRERLARDRXXXXXXXXXXXXVDXXXXXXXXXXXXXR------RRGEVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQREEEISALLLRVGALESRLRGAAEDKEGQLRREVETVAIKSLEAAEQRRAELEEKASALATRLRQREAEGILRDRLVKDLERRIGRVQERAANVQEKDKTELLKLTGDLEATRKALSDREARARVEEGRLSRRLRDEECKVGVVSARLRTLEQRARFLETGAAAARQRAEAGMRKEREMSSRLAEAETARACQEVAVTTLKAQLEELRRGAAAGDAALREAAKLKKMLEGALVLHAKVSPLPPPTDTKGG---DAAVAAGGGAEAGAGAARGXXXXXGLAGLAELVERLLRRAEGYRRDLXXXXXXXXXXXXXXXXXXXXXXHASELRSLLKQKRRVSAQVARGAEAARXXXXXXXXXXXRVRSEGVSLRAELETARKQMEGHGDMAERLQATVAELRRDIFPQ--ALTDRASKAEAAAARASGDLSAANGMVSSLENAVGAAEAENADILRRLTRKDGDYVALYSRLEGTMAELDAVKATLVNVRENRVSTPAGVVSGAKSRGDXXXXXXXXMTEAEAVAR---LAPEAVAAGQAETAALGGKHADALEDSRRKMKKRRARSDLACVRLRTRMCGARVLSGVLDKWAARRSARAFWRLRVRESEEIKSEQVSGGATPPCARCETSGDDYDRIYGGYDRCNGGGDLAKLTIQAPTHMIHSGGDGSGGDGWVSPWGSPLDG-------------DAGDGSRGRRWPRSARRHRXXXXXXXXXXXXXXXXXKSFRRRESGRPNWVGTASGERRSSPPPPSPASC-------------------------RARQHKRSPHGGSFSVAWARTG-DGXXXXXXXFV--------MTPRSAADGGYDTERSFFSSAASEPRYHCLRPGLPSPAWSSAGSLDGMAP-LLPMDASDASQREGGGPSRXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGVAQDSSDSDADRQSTAAGGVDVGGIEGSWAGVGLEVSVGGSPGGDSWWALSDEEID 5417
PVACTLVAFEPGSLGLELE IVD++ R H E P RRLGCRVFRVTP+GQAARHGS+HPGDAL VLDGVDV+S FED+T LL+RQGRRRL+GF+GAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX +GG GG + G+ + T + + RR RS SFASLP S+ ++A +L E LPHP DA + RS GG+ R R R + + GG S V R E S G + + A + LGSSW S A G+ +AGG A G +GR D SRGESLQRSLAEA+E+K ALAAER WLLEELQR RE LERDGALAG EVQ DVL+MEV AL+GELRRAR+EL ACEAGR+EL EA +RD ARRDR+AA XXXXXXXX XXXXXXXXXXXXX RR E AEA XXXX X XXXXXXXX XXXXXXXXX EEEISALLLRVGA ESR R +EDK +LR EVE A+KSLEAAE+RRAE E KASA+A RLR+REAEG +DR+VKDLE R+GR Q +A+ VQE++ +EL ++ G+LE RKALSDREARAR E GRL RRLR++E K +A LR LEQRA+FLETG AARQRAEA RKE+E+S RLAEAET RACQEVAVTTLKAQLEELRRGAAAGDAALRE AKL+K+LEGA + H P+ K G D G ++ G G A G L EL E+L R + R+L A+ELRSLL+QKR VSA++A GAEAAR ++ ++GVSLR EL+ AR+Q E +G+ A+ L+ V+ELRR + A+ + S AEAA A+A G + A VSSLE A+ AAEAE AD++RRLTRKDGD VAL SRLE T++EL+AVK LV N V G RG T E VA +A A A QAE L +H +A E+SR ARS+LACV LRTRMCGARVLSGV KWAARR+A AFWRL+ S S ++G CARC +G G DR A LTI+AP G SP G AG G A XXXXXXXXXXXXXXXXX RAR SP GGSFS+AW+ G D V + P DTERSFFS+A+SEPRYHCLR GL SPAWS+AGS G A ++P+D SDAS XXXXXXXXXXXX G G V G+E GLEVSVGG GDSWWALSDEE +
Sbjct: 150 PVACTLVAFEPGSLGLELEAIVDDDKGRR-------HGEXXXXXXXPR-----RRLGCRVFRVTPDGQAARHGSVHPGDALVVLDGVDVLSDPFEDITHALLQRQGRRRLIGFMGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGGSGGGERGRVNGHNGEVPAPTALGHH--------------------------------------------SRRSRSSSFASLPPPGSKLFGAAAADLDWREAERLPHPRDAATRIQRSRPAGGSTTGCR---RVEGNDDMRTENKRRFSRTVSSTAGLGEATAAGGGGESDVRREPERERSGVRASFGGGSRL---------ASRESLGSSWGSFATTGRMGTATAGGRAAGGGLYRGRPLDGSRGESLQRSLAEALEDKRALAAEREWLLEELQRAREATLERDGALAGQEVQTDVLKMEVAALDGELRRARQELGACEAGRRELHEAAKRDLARRDRDAAXXXXXXXXXXXXXXXXXXXXXXXAATAXXXXXXXXXXXXXXXXXXXXXXRRAESAEARAXXXXEXLEXXXXXXXXAAVEASGALRREREXXXXXXXXX----EEEISALLLRVGASESRSRRLSEDKAERLR-EVEEAAVKSLEAAERRRAEWENKASAIAARLREREAEGARKDRVVKDLEGRLGRAQAQASEVQEREGSELRRVAGELEVMRKALSDREARAREETGRLERRLREDEKKACKTTAGLRKLEQRAKFLETGIVAARQRAEAAARKEKEVSERLAEAETERACQEVAVTTLKAQLEELRRGAAAGDAALRETAKLRKILEGAALRHVGTQPVVAADCGKSGRRDDTRSGGGSTSKNGRGGAGGES-------LVELAEKLQGRTDELGRELDSVRQALAMARERFPALLAREKDAAELRSLLEQKRGVSARLASGAEAARVRAERAESQAKKMVADGVSLRTELKAARQQAETNGERAKGLEENVSELRRVDADEIRAMAAKLSDAEAAEAKARGGIDTATCRVSSLEEAMDAAEAERADVVRRLTRKDGDLVALQSRLEETLSELEAVKLALVEGPSNSVGD-----GGGGGRGKIPGEARVQATLGEGVAGAHVVAAAATTAAQAEADELKRQHVEAQEESRL------ARSELACVHLRTRMCGARVLSGVFHKWAARRAAGAFWRLKT-TSTTGNSSAIAGSVVSSCARCGAAGTGRQGSLDGDDRPTS----AVLTIEAPIPSSQGGXXXXXXXXXXXXXXSPRSGYXXXXXXXXXXXXXAGSDKCGPETTAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARSMT-SPPGGSFSIAWSNGGTDAVTPANSTSVDVAGGSGLIAPGVVGVDKGDTERSFFSTASSEPRYHCLRSGLSSPAWSNAGSWTGSADGVMPVDMSDAS-------GEXXXXXXXXXXXXAAKPVCSDGGGGKSGGQGXXXXXXXXXXXXXXXXXXXV---GLE-----FGLEVSVGG---GDSWWALSDEEAE 1707
BLAST of mRNA_P-fluviatile_contig19.3632.1 vs. uniprot
Match: A0A6H5L985_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L985_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 9.280e-12 Identity = 45/99 (45.45%), Postives = 54/99 (54.55%), Query Frame = 3
Query: 4875 SPHGGSFSVAWARTGDGXXXXXXXF---------VMTPRSAADGGYDTERSFFSSAASEPRYHCLRPGLPSPAWSSAGSLDGMAP-LLPMDASDASQRE 5141
SP GGSFS+AW ++ P GG D R FFS+A+SEPRYHCLR G SPAWS+AGS G A ++P+D SDAS E
Sbjct: 3 SPPGGSFSIAWWNGSSDPVKPVKSTQVGMAGGSGLIAPGVVGVGGGDIARGFFSTASSEPRYHCLRSGFSSPAWSNAGSWVGSADGVMPVDMSDASGEE 101 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig19.3632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig19.3632.1 >prot_P-fluviatile_contig19.3632.1 ID=prot_P-fluviatile_contig19.3632.1|Name=mRNA_P-fluviatile_contig19.3632.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1734bp MNSPRPVLRDRSNEERLTTKSLIRGFIDQRETKQQQNTSHSLTVENGDPGback to top mRNA from alignment at P-fluviatile_contig19:2456026..2472288+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig19.3632.1 ID=mRNA_P-fluviatile_contig19.3632.1|Name=mRNA_P-fluviatile_contig19.3632.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=16263bp|location=Sequence derived from alignment at P-fluviatile_contig19:2456026..2472288+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig19:2456026..2472288+ >mRNA_P-fluviatile_contig19.3632.1 ID=mRNA_P-fluviatile_contig19.3632.1|Name=mRNA_P-fluviatile_contig19.3632.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=10404bp|location=Sequence derived from alignment at P-fluviatile_contig19:2456026..2472288+ (Porterinema fluviatile SAG_2381)back to top |