mRNA_P-fluviatile_contig19.3580.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig19.3580.1
Unique NamemRNA_P-fluviatile_contig19.3580.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig19.3580.1 vs. uniprot
Match: D8LSF0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSF0_ECTSI)

HSP 1 Score: 522 bits (1345), Expect = 1.070e-178
Identity = 294/381 (77.17%), Postives = 322/381 (84.51%), Query Frame = 2
Query:  833 MMLPRSNDDLVEYMQKHGMVKTPAILEAFRAVDRGDFATPQLTQVAYLNRPVQDGPVHLSAPFIYADALEELKPKPGMSFLNIGCGTGYLSYLVSMLLGERGQNHGVELNEALLEHAARCIAATDERLGRKTDIQILRGNGLNVVVDSGGGYDCVYVGAGCDPDLTLPYLQGLLNVGGVMVAPFREELVRVERLEDGSFSSRTLCNVCFSPIAMPTSPSAGSKKNG--GTPVGPPAVRFVVKPWSPQYHSIYPRSFRDAVVIVLMANAREDALPGVLPPALWMEIMGFARRDWFSESAILEERQARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXISP--------SSISSGCL-GAAKTVAMLPVKAGNAAASQIGCPVS 1942
            M LPRSND+LV YM+KHGMVKTPAI+EAFRAVDRGDFATP L Q+ Y NRPVQDG VHLSAPFIYADALEEL PKPGMSFLNIG GT YLSYLVSML+GE G NHGVELNEALLEH+ARCIA+TD+RLGRKTDIQ+LRGNGL+V V+ G GYDCVYVGAGCDPDLTLPYLQGLLNVGGVMV PFREELVR+ER+ DGSFSSR LCNVCFSPI M       +KK G  G P  PP VRFVVKPWSP  HS+YPRSFRD V+ VLMANARED+LPG LPPALWMEIMGFARRDWFSESAI++ER+A A      XXXXXXXXXXXXXXXXXXXXXX           S ++SGCL GAA+TVA+LPV+AG+AAA+Q+GC VS
Sbjct:    1 MKLPRSNDELVAYMKKHGMVKTPAIIEAFRAVDRGDFATPNLGQLVYFNRPVQDGDVHLSAPFIYADALEELSPKPGMSFLNIGSGTCYLSYLVSMLVGELGVNHGVELNEALLEHSARCIASTDDRLGRKTDIQVLRGNGLSVAVEPGCGYDCVYVGAGCDPDLTLPYLQGLLNVGGVMVVPFREELVRMERMADGSFSSRALCNVCFSPIVM-----VDTKKEGFRGAPEPPPTVRFVVKPWSPLCHSVYPRSFRDTVLNVLMANAREDSLPGTLPPALWMEIMGFARRDWFSESAIIQEREATARAKRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSILTSGCLVGAARTVALLPVRAGSAAATQMGCHVS 376          
BLAST of mRNA_P-fluviatile_contig19.3580.1 vs. uniprot
Match: A0A835ZPS1_9STRA (Protein-L-isoaspartate O-methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPS1_9STRA)

HSP 1 Score: 249 bits (635), Expect = 1.120e-68
Identity = 132/295 (44.75%), Postives = 183/295 (62.03%), Query Frame = 2
Query:  845 RSNDDLVEYMQKHGMVKTPAILEAFRAVDRGDFATPQLTQVAYLNRPVQDGPVHLSAPFIYADALEELKPKPGMSFLNIGCGTGYLSYLVSMLLGERGQNHGVELNEALLEHAARCIAATDERLGRKTDIQILRGNGLNVVVDSGGGYDCVYVGAGCDPDLTLPYLQGLLNVGGVMVAPFREELVRVERLEDG-SFSSRTLCNVCFSPIAMPTSPS--AGSKKNGGTPVGPPAVRFVVKPWSPQYHSIYPRSFRDAVVIVLMANAREDALPGVLPPALWMEIMGFARRDWFSESA 1720
            + N  +  Y++  GM++TPA++EAF+ VDRGDF   QL  + Y ++P++   VH+SAPFIYA A E+L  +PG SFLNIG GTGY SY+ S+L+GE G NH +E    ++  A   +AA +++L R +DIQ + GNGL ++  S   YD +YVGAGC      P+L  LLN GG +VAPF  ELVRV +  DG +  +  +C V F PI  P S       +     P GP   +F V PW+P+ H+ +P  FR AV   L+ +ARE +LP  LPPA+W E+  + RRDWF+  A
Sbjct:  415 QDNATMCRYLRDRGMLQTPAVVEAFQTVDRGDFVPEQLKPLVYGDQPMKLNKVHISAPFIYAQATEQLNLRPGTSFLNIGSGTGYFSYVASVLVGESGTNHSIEAEPEMVGFAKAHVAAQNKKLDRHSDIQFITGNGL-LLDPSVYRYDAIYVGAGCTAAWNQPFLASLLNPGGTLVAPFGHELVRVRKSADGLTTETSAMCQVAFRPIVQPRSAPWLPLCRPPARAPRGP-RPQFEVPPWAPRTHAQHPPPFRRAVRACLLMSAREGSLPARLPPAVWYEVASYLRRDWFAAGA 707          
BLAST of mRNA_P-fluviatile_contig19.3580.1 vs. uniprot
Match: A0A1V9ZCL0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCL0_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.200e-40
Identity = 103/321 (32.09%), Postives = 155/321 (48.29%), Query Frame = 2
Query:  848 SNDDLVEYMQKHGMVKTPAILEAFRAVDRGDFATPQLTQVAYLNRPVQDGPVHLSAPFIYADALEELKPKPGMSFLNIGCGTGYLSYLVSMLLGERGQNHGVELNEALLEHAARCIAA--------TDERLGRKTDI--------------------------QILRGNGLNVVVDSGGGYDCVYVGAGCDPDLTLPYLQGLLNVGGVMVAPFREELVRVERLEDGSFSSRTLCNVCFSPIAMPTSPSAGSKKNGGTPVGPPAVRFVVKPWSPQYHSIYPRSFRDAVVIVLMANAREDALPGVLPPALWMEIMGFARRDWF 1708
            +ND+L   +++HG++KT ++LEAF+AVDRG F   +     Y ++P++   VHLSAP IYA ALE      G+SFLNIG G+GY S LV  + G+   NHG+E++  ++    R +AA         DE      +                            +  GN   + VD    YD +YVG G  P+  +  +  LL   G+ + PF  +L+++   EDG++S   L NV F+P+     P    +             F  + WS + H++YPR+FR A  I+ M+         +LP ALW+ I GF    WF
Sbjct:    9 TNDELARSLERHGVIKTESVLEAFKAVDRGLFVPIEAQDRVYSDQPIRAASVHLSAPHIYAQALEAFSLYRGLSFLNIGSGSGYFSCLVGTITGKDAINHGLEIDPEVVAVCERSVAAYRTSRMIANDENADMNQETTSDANNALIALEEDDPEDEYDDFGVCNVQLGNVFTMEVDKNIKYDRIYVGGGA-PENMIATVHSLLKPMGIAIGPFGNKLMKIRCREDGTYSQIVLTNVQFAPLRGNNVPDNNVEMK---------CYFPPQAWSLKLHAMYPRNFRRATAILYMSQ-------DLLPSALWIRIFGFLPSTWF 312          
BLAST of mRNA_P-fluviatile_contig19.3580.1 vs. uniprot
Match: A0A7S4W878_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4W878_9DINO)

HSP 1 Score: 164 bits (416), Expect = 5.820e-40
Identity = 116/336 (34.52%), Postives = 175/336 (52.08%), Query Frame = 2
Query:  839 LPRSNDDLVEYMQKHGMVKTPAILEAFRAVDRGDFATPQLTQVAYLNRPVQDGPVHLSAPFIYADALEELKP-KPGMSFLNIGCGTGYLSYLVSMLLGERGQNHGVELNEALLEHAA-RCIAATDERLGRKTDIQILRGNGLNVVVDSGGGYDCVYVGAGCDPDLTLPYLQGLLNVGGVMVAPFR----EELVRVERLEDGSFSSRTLCNVCFSPIAMP----------------------TSPSAGSKKNGGTPVGPPAVRFVV----KPWSPQYHSIYPRSFRDAVVIVLMANAREDALPGVLPPALWME-IMGFARRDWFSESAILEERQARA 1747
            LP SN  +VE +   G +++   + AF+A+DR  F      ++AY + P++ G +HLSAP IYA ALE L P KPGMSFLN+G GTGY + ++S L GE   NHG+++    + HA  RC      RL  KT+I+   GN   + ++    YD +Y+GA C    +  YL  LL VGGV++ PF+    ++L RV R  +  FS   L +V F+ +  P                      T+P    ++ G  PVG P V F      +PW+P+   +YP S+R  V + L+   R+ ++   LP  +W++ I  +  + WF      E+R A+A
Sbjct:   20 LPASNAAMVEELVHSGSLRSQDCISAFQAIDRQHFWPADSGELAYADMPLRSGRLHLSAPHIYAKALESLMPLKPGMSFLNVGSGTGYFNSIISELTGELATNHGIDIWSETVVHAVQRC------RLLGKTNIEFTLGNAYQLNINETMRYDRIYLGA-CANSRS-KYLYRLLEVGGVLIGPFQVGQTQQLRRVFRQTETLFSVEVLGSVQFASLIEPVPSSPRAPTLMQSEVSQGQSGVTTPRLAGEEGGQLPVGLPGVPFTFSLCERPWTPERCWLYPASYRRTVAMGLLCKPRDHSIV-CLPTEIWVKHIFPWCPKWWF------EDRYAQA 340          
BLAST of mRNA_P-fluviatile_contig19.3580.1 vs. uniprot
Match: A0A812W4Q4_9DINO (PCMTD1 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812W4Q4_9DINO)

HSP 1 Score: 162 bits (410), Expect = 1.120e-39
Identity = 126/311 (40.51%), Postives = 166/311 (53.38%), Query Frame = 2
Query:  827 HGMMLPRSNDDLVEYMQKHGMVKTPAILEAFRAVDRGDF--ATPQLTQVAYLNRPVQDGPVHLSAPFIYADALEELKP-KPGMSFLNIGCGTGYLSYLVSMLLGERGQNHGVELNEALLEHAARCIAATDERLGRKTDIQILRGNGLNVVVDSGGGYDCVYVGAGCDPDLTLPYLQGLLNVGGVMVAPFR----EELVRVERLEDGSFSSRTLCNVCFSPIAMPTSPSAGSKKN----GGTPV-GPPAVRFVV----KPWSPQYHSIYPRSFRDAVVIVLMANAREDALPGVLPPALWME-IMGFARRDWF 1708
            H      +ND +V+ ++  G +++PA + AFRAVDRGDF           Y + P++ G +H SAP IYA ALE L P KPGMSFLNIG GTGY S LV+ ++GE G N G+EL    + HA    A+    LG K  I+   GN   + V+ G  YD +Y+GA   P     YL  LL VGGV+V PF+    ++L RV R  +  F    L +V F+ +  P +    S       G  PV G P V F      KPWS + +  YPRSFR  V  VLM N    A  G++P  LW+E I+ +  R WF
Sbjct:    9 HASRDAEANDRMVDQLEHSGTLRSPACIAAFRAVDRGDFWIRRGSFGSDIYGDAPLRHGKLHQSAPHIYARALEALMPLKPGMSFLNIGSGTGYFSCLVAEVVGECGVNDGLELWPENVVHAQERCAS----LG-KYHIEFNVGNVYQLDVNLGMRYDRIYIGACACP--RAQYLYSLLEVGGVLVGPFQSGHSQQLRRVVRESEAHFKIEVLNSVHFASLVEPPATQELSDDAPAPLGVLPVVGLPGVPFAFALRQKPWSVERNWAYPRSFRQ-VAAVLMQN---QASLGLVPLELWVEHILPWCPRWWF 308          
BLAST of mRNA_P-fluviatile_contig19.3580.1 vs. uniprot
Match: A0A812YG89_9DINO (PCMTD1 protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812YG89_9DINO)

HSP 1 Score: 161 bits (408), Expect = 1.610e-39
Identity = 125/304 (41.12%), Postives = 165/304 (54.28%), Query Frame = 2
Query:  848 SNDDLVEYMQKHGMVKTPAILEAFRAVDRGDF--ATPQLTQVAYLNRPVQDGPVHLSAPFIYADALEELKP-KPGMSFLNIGCGTGYLSYLVSMLLGERGQNHGVELNEALLEHAARCIAATDERLGRKTDIQILRGNGLNVVVDSGGGYDCVYVGAGCDPDLTLPYLQGLLNVGGVMVAPFR----EELVRVERLEDGSFSSRTLCNVCFSPIAMPTSPSAGSKKN----GGTPV-GPPAVRFVV----KPWSPQYHSIYPRSFRDAVVIVLMANAREDALPGVLPPALWME-IMGFARRDWF 1708
            +ND +V+ ++  G +++PA + AFRAVDRGDF           Y + P++ G +H SAP IYA ALE L P KPGMSFLNIG GTGY S LV+ ++GE G N G+EL    + HA    A+    LG K  I+   GN   + V+ G  YD +Y+GA   P     YL  LL VGGV+V PF+    ++L RV R  +  F    L +V F+ +  P +    S       G  PV G P V F      KPWS + +  YPRSFR  V  VLM N    A  G++P  LW+E I+ +  R WF
Sbjct:    1 ANDRMVDQLEHSGTLRSPACIAAFRAVDRGDFWMRRGSFGSDIYGDAPLRHGKLHQSAPHIYARALEALMPLKPGMSFLNIGSGTGYFSCLVAEVVGECGVNDGLELWPENVVHAQERCAS----LG-KYHIEFNVGNVYQLDVNLGMRYDRIYIGACACP--RAQYLYSLLEVGGVLVGPFQSGHSQQLRRVVRESEAHFKIEVLNSVHFASLVEPPATQELSDDAPAPLGVLPVVGLPGVPFAFALRQKPWSVERNWAYPRSFRQ-VAAVLMQN---QASLGLVPLELWVEHILPWCPRWWF 293          
BLAST of mRNA_P-fluviatile_contig19.3580.1 vs. uniprot
Match: A0A1V9ZM67_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZM67_9STRA)

HSP 1 Score: 157 bits (398), Expect = 2.330e-38
Identity = 102/329 (31.00%), Postives = 157/329 (47.72%), Query Frame = 2
Query:  848 SNDDLVEYMQKHGMVKTPAILEAFRAVDRGDFATPQLTQVAYLNRPVQDGPVHLSAPFIYADALEELKPKPGMSFLNIGCGTGYLSYLVSMLLGERGQNHGVELNEALLEHAARCIAA------------TDERLGRKTD---------------------IQILRGNGLNVVVDSGGGYDCVYVGAGCDPDLTLPYLQGLLNVGGVMVAPFREELVRVERLEDGSFSSRTLCNVCFSPIAMPTSPSAGSKKNGGTPVGPPAVRFVVKPWSPQYHSIYPRSFRDAVVIVLMANAREDALPGVLPPALWMEIMGFARRDWFSESAILEER 1735
            +ND+L   ++++G++K+  +L AF+AVDR  F  P +   AY + P++ G +H+SAP IYA  LE +    G+SFLNIG GTGY S LV  ++G+   NHG+E+N A +    +  AA            +DE +  + D                      Q + G+   +   +   YD +YVGAG  P   +  +  LL   G+ + PF ++LV++   EDGSF+   L  V F+P+            +  T   PP V      W+P  H+ YPR FR A+  +  +  R       LP  LW+ I G     WF+     E++
Sbjct:    9 TNDELALALRRNGIIKSDVVLAAFQAVDRAHFVPPSMIDRAYNDYPIRIGSMHISAPHIYAQVLEGMDLFRGLSFLNIGSGTGYFSCLVGTIIGKDAINHGLEINAAAVAACNQACAAYSAQRMAQQDNSSDEEVAVQNDNNASHHLAEVPHDASDGDFSVCQAVHGSVFTMDCAANIKYDRIYVGAGA-PTSLITTVHSLLKPLGIAIGPFGDKLVKLRCREDGSFTQTVLTGVHFAPLR-----DDSGNNDTKTCYFPPQV------WTPALHATYPRPFRSAIKTLWQSQPR-------LPSVLWLRIFGMLPESWFNPERTTEQK 318          
BLAST of mRNA_P-fluviatile_contig19.3580.1 vs. uniprot
Match: A0A485LB12_9STRA (Aste57867_18187 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LB12_9STRA)

HSP 1 Score: 156 bits (395), Expect = 4.260e-38
Identity = 98/340 (28.82%), Postives = 166/340 (48.82%), Query Frame = 2
Query:  848 SNDDLVEYMQKHGMVKTPAILEAFRAVDRGDFATPQLTQVAYLNRPVQDGPVHLSAPFIYADALEELKPKPGMSFLNIGCGTGYLSYLVSMLLGERGQNHGVELNEALLE----------------------------------------HAARCIAATDERLG-RKTDI---QILRGNGLNVVVDSGGGYDCVYVGAGCDPDLTLPYLQGLLNVGGVMVAPFREELVRVERLEDGSFSSRTLCNVCFSPIAMPTSPSAGSKKNGGTPVGPPAVRFVVKPWSPQYHSIYPRSFRDAVVIVLMANAREDALPGVLPPALWMEIMGFARRDWFSESAILEER 1735
            +ND+L   ++ H ++K+  +L+AFR VDR  F    +   AY + P+++G VHLSAP IYA  +E L+   G+SFLNIG G+GYLS LV  + G+   NHG+E++  +++                                        H+       ++    RK+D+   +++ G+   +       YD +Y+GAG  P+  +  ++ LLN  G+ V PF ++L+++ R +   FS   L NV F+P+   T+ +A ++         P   F  + W+P  H  YPR F++AV ++L  ++        LP  LW+ +  +   DWF+E     E+
Sbjct:    9 TNDELAMALKGHDIIKSKDVLDAFRTVDRAHFVPRNMVSRAYKDYPIREGNVHLSAPHIYAQVMEALELTHGVSFLNIGSGSGYLSCLVGAITGKDAINHGLEIDGTVVQACRSSLEMYMSEEKTPPVQRDHNNQDDEIYNDDVEDELDFHSDSADEEPEDAFNTRKSDVGVCEVVCGDAFRMDTKKNVKYDRIYIGAGA-PERMIDTVKELLNPFGIAVGPFGDKLLKIRRRDANRFSEVVLGNVTFAPMRENTTNNAFAE---------PITYFPPQVWAPYQHGQYPRRFKEAVAMLLTTDSH-------LPTTLWLRVFEYFSHDWFNEELSATEK 331          
BLAST of mRNA_P-fluviatile_contig19.3580.1 vs. uniprot
Match: UPI001E68C395 (dentin sialophosphoprotein-like isoform X1 n=3 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E68C395)

HSP 1 Score: 162 bits (410), Expect = 5.300e-38
Identity = 87/224 (38.84%), Postives = 138/224 (61.61%), Query Frame = 2
Query:  845 RSNDDLVEYMQKHGMVKTPAILEAFRAVDRGDFATPQLTQVAYLNRPVQDGPVHLSAPFIYADALEELKPKPGMSFLNIGCGTGYLSYLVSMLLGERGQNHGVELNEALLEHAARCIAATDERLGRKTDI-----QILRGNGLNVVVDSGGGYDCVYVGAGCDPDLTLPYLQGLLNVGGVMVAPFREELVRVERLEDGSFSSRTLCNVCFSPIAMPTSPSAGSK 1501
            R N++L++ +     ++T  +   FRA+DR ++ TP+  + AY +   ++GP+HLS+P IY++ +E L+ KPG+SFLNIG GTGYLS L  ++LG  G +HGVE++ A++E+A + I    E      D      +   GNGL  +     GYD VY GAGC P+    Y + L+ VGG++V P  + L++V RL +  ++SR+L NV F+ + +PT+  A +K
Sbjct:    9 RDNNELIDNLMSGNYIRTKEVERVFRALDRAEYMTPEAREQAYKDLAWRNGPLHLSSPCIYSEVMEGLELKPGLSFLNIGSGTGYLSTLAGLILGTAGISHGVEVHPAVVEYATKKIRLFFENCSILDDFDFCEPKFYHGNGL-CLEQLVSGYDRVYCGAGC-PEQYEDYFKKLIKVGGILVMPLNDTLLQVRRLGEDKWTSRSLLNVSFATLRIPTAEEATNK 230          
BLAST of mRNA_P-fluviatile_contig19.3580.1 vs. uniprot
Match: A0A7S1KVX7_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1KVX7_ALECA)

HSP 1 Score: 157 bits (398), Expect = 5.600e-38
Identity = 113/329 (34.35%), Postives = 171/329 (51.98%), Query Frame = 2
Query:  824 DHGMMLPRSNDDLVEYMQKHGMVKTPAILEAFRAVDRGDFATPQLTQVAYLNRPVQDGPVHLSAPFIYADALEELKP-KPGMSFLNIGCGTGYLSYLVSMLLGERGQNHGVELNEALLEHAA-RCIAATDERLGRKTDIQILRGNGLNVVVDSGGGYDCVYVGAGCDPDLTLPYLQGLLNVGGVMVAPFR----EELVRVERLEDGSFSSRTLCNVCFSPIAMP------------TSPSAGSKKNGGTP-----------VGPPAV----RFVVKPWSPQYHSIYPRSFRDAVVIVLMANAREDALPGVLPPALWME-IMGFARRDWF 1708
            D    LP SN  +VE +   G +++   + AF+AVDR  F      ++AY + P++ G +HLSAP IYA ALE L P +PGMSFLN+G GTGY + ++S L+GE   NHG+++    +EHA  RC      RL  KT+I+   GN   + ++    YD +Y+GA C    +  YL  LL VGG+++ PF+    ++L RV R  +  F    L +V F+ +  P            T  S G+ ++G T            VG P +        +PW+ +   IYP S+R  V + L+   R+ +LP  LP  +W++ I  +  + WF
Sbjct:   15 DEARGLPVSNAAMVEELAHSGSLRSQECITAFQAVDRQHFWPANSGELAYADTPLRSGRLHLSAPHIYAKALESLLPLRPGMSFLNVGSGTGYFNSIISELVGELATNHGIDIWPETVEHAVQRC------RLLGKTNIEYTLGNVYQLNINQTMRYDRIYLGA-CANSRS-KYLYRLLEVGGILIGPFQVGHTQQLRRVVRQSETLFKVEVLGSVQFASLIEPVPSASRPSTPAYTETSQGTGRSGATTPRCVLDDGAQAVGLPGIPSTFSLCERPWTRERCWIYPTSYRRTVAMGLLCKPRDHSLPS-LPTDIWIKHIFPWCPKWWF 334          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig19.3580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSF0_ECTSI1.070e-17877.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZPS1_9STRA1.120e-6844.75Protein-L-isoaspartate O-methyltransferase-domain-... [more]
A0A1V9ZCL0_9STRA1.200e-4032.09Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A7S4W878_9DINO5.820e-4034.52Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A812W4Q4_9DINO1.120e-3940.51PCMTD1 protein n=1 Tax=Symbiodinium sp. CCMP2592 T... [more]
A0A812YG89_9DINO1.610e-3941.12PCMTD1 protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]
A0A1V9ZM67_9STRA2.330e-3831.00Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A485LB12_9STRA4.260e-3828.82Aste57867_18187 protein n=1 Tax=Aphanomyces stella... [more]
UPI001E68C3955.300e-3838.84dentin sialophosphoprotein-like isoform X1 n=3 Tax... [more]
A0A7S1KVX7_ALECA5.600e-3834.35Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig19contigP-fluviatile_contig19:1770604..1779761 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score527.3
Seed ortholog evalue5.7e-147
Seed eggNOG ortholog2880.D8LSF0
Preferred namePCMTD2
GOsGO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
EggNOG OGsCOG2518@1,KOG1661@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein-L-isoaspartate(D-aspartate) O-methyltransferase
Ec32 orthologEc-21_003440.1
Exons8
Model size2072
Cds size1113
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig19.3580.1prot_P-fluviatile_contig19.3580.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig19 1770731..1778929 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815806.6111288-UTR-P-fluviatile_contig19:1770603..17707301622815806.6111288-UTR-P-fluviatile_contig19:1770603..1770730Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 1770604..1770730 -
1693563376.059862-UTR-P-fluviatile_contig19:1770603..17707301693563376.059862-UTR-P-fluviatile_contig19:1770603..1770730Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 1770604..1770730 -
1622815806.7214274-UTR-P-fluviatile_contig19:1778929..17797611622815806.7214274-UTR-P-fluviatile_contig19:1778929..1779761Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 1778930..1779761 -
1693563376.1650028-UTR-P-fluviatile_contig19:1778929..17797611693563376.1650028-UTR-P-fluviatile_contig19:1778929..1779761Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 1778930..1779761 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815806.6237383-CDS-P-fluviatile_contig19:1770730..17707511622815806.6237383-CDS-P-fluviatile_contig19:1770730..1770751Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1770731..1770751 -
1693563376.0763967-CDS-P-fluviatile_contig19:1770730..17707511693563376.0763967-CDS-P-fluviatile_contig19:1770730..1770751Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1770731..1770751 -
1622815806.6352293-CDS-P-fluviatile_contig19:1771995..17722411622815806.6352293-CDS-P-fluviatile_contig19:1771995..1772241Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1771996..1772241 -
1693563376.0853174-CDS-P-fluviatile_contig19:1771995..17722411693563376.0853174-CDS-P-fluviatile_contig19:1771995..1772241Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1771996..1772241 -
1622815806.64663-CDS-P-fluviatile_contig19:1772560..17726991622815806.64663-CDS-P-fluviatile_contig19:1772560..1772699Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1772561..1772699 -
1693563376.0931249-CDS-P-fluviatile_contig19:1772560..17726991693563376.0931249-CDS-P-fluviatile_contig19:1772560..1772699Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1772561..1772699 -
1622815806.6583757-CDS-P-fluviatile_contig19:1773614..17737451622815806.6583757-CDS-P-fluviatile_contig19:1773614..1773745Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1773615..1773745 -
1693563376.1012588-CDS-P-fluviatile_contig19:1773614..17737451693563376.1012588-CDS-P-fluviatile_contig19:1773614..1773745Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1773615..1773745 -
1622815806.675104-CDS-P-fluviatile_contig19:1774229..17743531622815806.675104-CDS-P-fluviatile_contig19:1774229..1774353Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1774230..1774353 -
1693563376.109596-CDS-P-fluviatile_contig19:1774229..17743531693563376.109596-CDS-P-fluviatile_contig19:1774229..1774353Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1774230..1774353 -
1622815806.6893184-CDS-P-fluviatile_contig19:1774975..17751781622815806.6893184-CDS-P-fluviatile_contig19:1774975..1775178Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1774976..1775178 -
1693563376.128674-CDS-P-fluviatile_contig19:1774975..17751781693563376.128674-CDS-P-fluviatile_contig19:1774975..1775178Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1774976..1775178 -
1622815806.699385-CDS-P-fluviatile_contig19:1777034..17771511622815806.699385-CDS-P-fluviatile_contig19:1777034..1777151Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1777035..1777151 -
1693563376.137395-CDS-P-fluviatile_contig19:1777034..17771511693563376.137395-CDS-P-fluviatile_contig19:1777034..1777151Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1777035..1777151 -
1622815806.710245-CDS-P-fluviatile_contig19:1778797..17789291622815806.710245-CDS-P-fluviatile_contig19:1778797..1778929Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1778798..1778929 -
1693563376.1475785-CDS-P-fluviatile_contig19:1778797..17789291693563376.1475785-CDS-P-fluviatile_contig19:1778797..1778929Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1778798..1778929 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig19.3580.1

>prot_P-fluviatile_contig19.3580.1 ID=prot_P-fluviatile_contig19.3580.1|Name=mRNA_P-fluviatile_contig19.3580.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=371bp
MMLPRSNDDLVEYMQKHGMVKTPAILEAFRAVDRGDFATPQLTQVAYLNR
PVQDGPVHLSAPFIYADALEELKPKPGMSFLNIGCGTGYLSYLVSMLLGE
RGQNHGVELNEALLEHAARCIAATDERLGRKTDIQILRGNGLNVVVDSGG
GYDCVYVGAGCDPDLTLPYLQGLLNVGGVMVAPFREELVRVERLEDGSFS
SRTLCNVCFSPIAMPTSPSAGSKKNGGTPVGPPAVRFVVKPWSPQYHSIY
PRSFRDAVVIVLMANAREDALPGVLPPALWMEIMGFARRDWFSESAILEE
RQARAQAERDAVAAGKGKGKRKGREGSGGGGSGISPSSISSGCLGAAKTV
AMLPVKAGNAAASQIGCPVS*
back to top

mRNA from alignment at P-fluviatile_contig19:1770604..1779761-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig19.3580.1 ID=mRNA_P-fluviatile_contig19.3580.1|Name=mRNA_P-fluviatile_contig19.3580.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9158bp|location=Sequence derived from alignment at P-fluviatile_contig19:1770604..1779761- (Porterinema fluviatile SAG_2381)
CGGCTATCTGGTAACGTACACAGGAATCACCGCAACGCTGCCGGTTGCGG CAACTCTCTTGCACGGATCTGTGTGTTTCACGGTTGGTACTAGCTGTTAG TGATTGGTACAAGGGTCATGGCAGCACGTGACCGTTGAAAGATCAGGATC TTCCACAGCGTCTTGGACACACCGATTTCCTTGTGTTGAGCTCTTGAGCT CGGTGCGTTGATACGTAAACAGCAGCAATTTGCAGACTTTTGAGGAATAC CCTTCGTCGGCTCTCTGCCTGTTCTCCATCGTGGTTTGCCACACCATACT TCAGGTGGAGGAAACAATCAGAGAGTCCACCCCAAGTATCTCTGCACCGC CGTCGTTAGTGGCAGACCACCAGCTCTCGTGAAAACGCGAACGGACAAGC ACAAGCGCGGGCCGACTGCTGTTTGCGCCATCTTTCCATCATCTTAAGAC GAGAGTGAGAGGTAGAGGCAGGATGAGTTTCTCCTTCATTGGCGGCGCTT CCTGTTGAACGATTGAACGAGTGCTCCCCGCCCCCCCGCGAGCAACAAAG GCGGCGTGTTTGACCGCGACTAGCGAAGGTGTACATTTTGCACAGCGCGG GGTTCCTTTGTTTCGTTTGTCGCGGGGGGTTCGCACGGCTGTGCGCGAGA GAGGGTGTCGGCGGGGACAAGGGAAGGGTTGGCGCGCGCCCGGCATCAGA GTATCAGCAACGCCGGCATCAGCAGCATCAGCAGCAGCGTCAGCAGCAGT GGCGCAGGCAACGGCAGTGATAGGCCGTAGGAACGGGGTATAGTACACGA TCGACAACCGCGGGACGATCGACGACCACGGGATGATGCTGCCGCGGAGC AATGACGACCTGGTGGAGTACATGCAGAAGCACGGCATGGTCAAGACCCC CGCCATACTCGAGGCCTTCCGTGCCGTGGACAGGGGAGACTTCGCCACAC CCCAGTTGACACAGGTACGGGGGGAAGACGCCGAGAGCAGTGCCCCAGTT CTGAATCCATTGAGATTTTTTCCACCTTTTTCCTCCGATGGGGGGCGGGC GGGGGTGGGGGCTTGCTTGCCTTGCAGTCATTTGGCCATTGATCACGCGT CCCTTCCAAAGCGGAGCACCATTCATACTCCCGACCGAGGCACCTTCCAA CATTTGGCCGCTCTTGAACGTTTTTTGTGTTCTTCACATGAAATTCTTGT TTGGAACGGTTTGGGGGAGGGGGGTGGGGGGGGCATACTCTTATGATTTG CATGCCTTAGCGGTTAGACCGTTGACCACGCGTCCTCGAGAGGACGGAGC GTTGTTCCCACAGGACCGATCACCGATGGCCAATCGTTCCTTCCTACTTT GCGAAAGGTGGCTCAAAATTGTCTTCCCTAGTCGATCTATCCTACAGATG TCACTTCTCGCCTTTTCAATCCACTTCCTACGCCCCAGTACAGCTGCCGC TTCTCCTGGCTATTTCATGCCTCAGACATCTCCCTGCAGCTTCCTTCTAC TTTTCCCAGCCCAGTCATGTACACTTCCCTCTCCTTGTACGACGAACATT CCCCAACTACATGAACCCGGTCTTCACACTTTTGGCCGCATTCACATTTG AACTTGTCATCCTCATCGTCTATCTCCCTAAATCTTCGTCTACGTTCTCG AATGTCAATGTCCCCGGTCCTAGATTTGACCTTCAGCTTCGCCCCTGCAT ATATTGGTCCATGCAGGTACTCCTTGATTCCTATTCCTTCTTTCAGCATC CCGTACACACCTAACCCCTCCTTGTCCTTGGTTTCTTTGGTTTGATTATG TGCTTCTCTCTCGGCAAAAGCAGCAGATGCCTTCTCCTTGAAGCCCTCTA GACCTTCCGTTTCCGGCGTATCGTCTTCGTCAATTTCGAGCTTCTTCCAA ACACAGTTTTTTTTGGGGCACAAAATACGTGCACAGAAAAACACAAGAAG ACGGGCGTTTTGACAGCGAAGGGGGAGAGGTGGCGGCAGCAACACTAACA ACAACGCCGCGGCGCGGAAGGAAGGGGGAAGGGTTTGTTTTAGCACAAAA GGTCGAGGGACGGGGAATGGGGCGGAGGGGCTCAACAGACTTCAATTGGG ACCGTCCCGTTTTGTCGGGTGCTAGTGAAGTCAGCTGAAGCAGGGTTCGC GGTTGTTTGCTAGTCTCGGGCAAAGAGGTCGTTGTAGGTACCGGCCGGGA GGAGTTATTCGGTCAGATCGGAGTTGTACGCAACCACGACCCACTAGCGA ACACGCCGCTCGAGCTCATATTTTGCGCTGCTTAATCCCACCTGTGTCTT TGTTGTCATTGTGGCGGTACCGGCTGTGTTTGCGGTGGTGGTGGTAGTGG CGTTTGTTACTCGTGGCAGACACTTGCGACATTGTTTTGGACCCCAAGCA GTCCTTTGCTGGCGGCTGGCGGCCGTGGTGCTAATAGAATCCATTTTGTT CTTATTGCTACTTCGTGTAATCCTGCAGGGTGGCCCACGTCGCACACCAA GTGAAAAACAATGCTTGCCGAATTGTTGGTGTTGATCTTGACGGTGTGTC GTGCCCAATGTTGCTGCTGTTGTTGTCGTTGTTGCTGCTGCTGCTGTATT ATTGATGCAGGTGGCCTACTTGAATCGACCGGTTCAAGACGGCCCGGTCC ATCTGTCCGCTCCGTTCATCTACGCGGACGCGCTCGAGGAGCTCAAACCC AAGCCGGGCATGTCCTTCTTAAACATCGTGAGTCACGGACCCCCCTGTGT GCGTGCTCCTCTCCAGTGGGTGTAACTTTTGGATGATCTGTTGGCATCGG GAAGCTCCACGCAGGCAGGAGAGACCATGTCCTTCCCTAGAAAGACCGGG AGCACGCACCTGTGTGCGTCAACGCGTGCTGAGATTCGTTCGGTGTCGAT ATGGGCCGTATTCAAAGCTGGCTGCCGATCGGCGAAGGACATGTTGCGTG ATTGGTGCGTTTTTCGCGTGTCTTGCCTGCAGCGGCCGATCCAGACGCGC TTCGCCGCGCTTTTGGTGCGTCAATGTGCCTTATAAGGATAGGCATGCAT GAACACATCACCCGGGCAGCACTAGTGTGATCCCGGGCCCGACGCGGGGC CCGGGATTCTCGGGAGTTTCGGCCAACGGGGGAACACAACAACAGTAACA ACAACAACAGCAACAACAACACACCACCCGGGCTGTATACTGAGACCCGT GACGAGGGTTGGGTGCGACACACTCCCGATGCCTTCAGGATGCAGGGAGC CAGCAGGACGTTCGACTGGTGGTAGGAGAAGATAAGCGGGCCCCGTCCAG GTGGCCACGCGTTGCCTTGTCCGCAACCGTAACTTCCTGATGTGGTTCTC TTCGCTGTACCGATCACTTAAAGAAAATATTGGACTGTTTTGGATGAGAC TCCTGCTCAACAGGAGTACCTCCCCCCAGGATAGGACGCCGCGCTGGGTC GGTTAGCTGCCGGAAACACAGCGCTGTGTGGCATACAAAGTGCCGTAACC GAAAAATACAGTGCCGACGGGCGGGCGGGATAGTCTCTTCCCTATTCTCA CCATTTTCGTCTCATCCACGATTCCGTCGAAGGAGGGAGAGAATGGTGTA CGGGGCGTTTATTGTCACATCAATTCGGGGGCCTGCAGATAGGATTAGTT CGTTCCGAATCTTCCCATCTGTGGGGTCTCAATTATTGCGGACGGATAAT TTCCGGATGAATATTTGAACACTTGCCCTAAGGCACGGTTGCGGCCGAGT GGGTGCGTGACCCGGGCGGACCTGCTGGCCTCTCCCTGCTACCGCCTGAG ATATCCTCACGGGCCCCCATGCTAAAGCTGGCCACTACTTCTAAATGCAG TACTCTGCCTGGTCCGAAGTTTTGGACACGGCGCGGGTGTGATGGTCATG AGCATGAGGCCCATGAAGGGACGACCACCCCGGCGAACGGGCGTTTACAG CAGGTCGCGTAGGATACCTCACCCTCAGGGTCAATTTCGGTGCTCGACAC CTCGGCGGTAGCAGAGGCCATCGCGTGAAACGGGCATGCTTTCGAAAGGT CGTGTCGAGAGCTTTGCAGCGACCCATGGGCCAATATTGACCAAACCGTC GCCATGGAGTTCCCGAGCTTCACAAATCGACTCGGGGGGTGTGATACCAT ATGCGACCTACGAAGTCGCCCCCCGGCGAAAGGAAAGTGAAACCGCGGCA CGTGAAGCAACGGCAGCAGCAGGAGAGGGGGTAATGGGCGGGGGTGGAAA GGTGGGGCAATCGTGAGAAAATACTCGGGCTGCGTGACACCGGCAGTGTT GGACGTGTAGATGTTGCTTCTCCCGCGCCTTGTTTCTGCTGCGGCGAGGG ATGCAGTAATCTCTGTCCGTGACCGCCGGTGCCGAGAGCGACTGCCGTAT GCGACGGACCCCCCGCGTCGTCTATGAACGGTTCTTTTCATTTGCTCGCG AAATTTGGCTGTTTTTGAGTGCTGTTGCTTTTATCTCTTGCCGTTATTGT CGCGCGGAACCACGAACGGACGGCGGCAACATTGACCAAAACGCAAACAA CGGTGATGGATGCGGCGGCGACGGCGGCGGCAGGGGTGCGGGACCGGCTA CCTGTCGTACCTTGTGTCCATGCTCCTCGGGGAGAGGGGCCAGAACCACG GTGTTGAGCTGAACGAGGCCCTTCTCGAGCACGCCGCCCGATGCATCGCC GCCACCGACGAGAGGCTAGGACGCAAGACGGACATACAGATCCTCCGCGG GAACGGCCTCAACGTGGTGGTGGACTCCGGAGGCGGGTACGTTCATTTCG TTGATTGTCTACCAAGATTTTTGCGATTTGCTTGGCGATTGCGTTTTGTT TTTTTGTTGGTTTGTCGAAGCGAAACCGTGTGCTTTCTTCTGATTTTTGT TTCGGATTATCTTTCCAAGATACTCCTTTGTTTCTCGAAAATGTTGTTGT GAACTTCCAAGAACTCCTTGACACATTCGTCTCCTTACTTTCGTTGACGT CGTCTATCCCCCGCCCCCGCCAATTTCGCCGCCCTGCTTTTCGGCCGCTT GCTGTGTCTCAACCTTAACCGCCGTGTCTTGACCGTTCCTTATCCTGCGC TGTTTCTTCGATGTTTGGCTACCTCATTCCTCGAGATTCGTCCCATAATG CTTGCTTTGTGTGTTTTTCGTTTCGAGACGTGGGGAGGGGTCCCTTGGCG CCGTTGGCAAGTGCCATGTTCCTTCTGTCAGCTTTCTTGCGATCGTTGTG GCAGCTTTTGCCGCTTGTTGCCACCGTCCCCTTTCCTTTTTTGGTTTTCG GGTTCCAGGTTCATGTTGCTGTCCGTACGTCTGGTTGACGTCTGATTTGT CCCTCCGCCGCTGACGCTTATTACGTACCTGGCACTCCTTGTAAAAATAC AAAAACAGGTACGACTGCGTGTACGTCGGCGCGGGTTGCGATCCGGACCT GACGCTGCCGTACCTACAGGGCCTCCTCAACGTCGGCGGCGTGATGGTGG CGCCGTTCCGCGAGGAACTCGTGCGCGTGGAGGTGAGGACACGAGGGGGG GGTACGAAAATTTGAAGGTGGTGGGGTGGGAGGCGGTTGCTTTGAGTGAG TGGGTGTGTGCAAGATGTCAGTAATGGTGGGGTCTGTGTTTCTGGCGAGG AACGGAATAATGAGATGCGCGGTCAGCCAAACGGAGCGCACGCGGCTCCG GAAGGACACCGGGGGGGAGGGGGGCGGGATGGCACAATGGGGCGGATGAG CAGGCGTCACCCTTAGGTGACGTCCTTGTCCGCGACTCATTTTGAGCGCA TTGATCAGTTGCCCTCCCTCAGGGCTCGCTTCCCAGTTTTTCAGCGGCAG ATGCAGCTAGTACATCCTGGTTCTCATCCCTCCCCCTCTCGAAAACTCAG AAAAAATGAACGGATCCGAAATTTCGTCGACACGCTGTCTCTAGCCCTCG ACATTGACGACTACGACGCGGTGGCGGCGGCCGCGCCAAAAACTATAAAT AACACACGAACGACAGCGCTTGGAGGACGGATCCTTCAGCAGCCGGACCC TGTGCAACGTGTGCTTTTCGCCGATCGCCATGCCGACATCCCCCTCCGCC GGATCCAAGAAGAACGGTGGAACTCCTGTTGGACCTCCGGCCGTGAGGTG AGGAGGGATGCGCCTTACGCAGTTGGATCTCACCGCTCGATCATCGTAGG TCTCCCCTCTCTCTGCAAATCCATTTCTCTCTCTCTGCGTCTCTCCCCCC GTGTGTCTCTCCCGCCTCCTCTTTCTCTCCATCTCTTTCTCTCCCTCTAT CTGCCTCTCCCCGTCTGCGTGCGTCCCCCCCCCCCCCGTCTCCCCCTCTC GTCCTCTGTCATCCGGCCCTCTGCCATTCTTTAGTCCATTTGCCCTTTTC TCCCTCCTCACCCTTTTTGCGCTCGTTCTCACTTGTGCACTGCCCCTTAT CTGTGTTTCTTGCTGCCTCAAGTCCTTTGATGTCAAACGAACGTTCATGT AGTCACCTTCGCAACACGGGCGCACTCAGAGGTACGTGTGTATCTCTTTA CAAACGGACTCCTGCCTGATAAGGTAGCCGATCGACGGGGCTTGCCGAAC CCCCTGTGTACCCGGGTCGTACGCGCGTTGGTCCGCATTCCCGTTGGCAT TTTCTCCTGTCACGAGCCTTGAGGCACGTTCACGACACGCAAAGCTTCTT CCTAGTCGATCGCTCGTTATTCGAGCAGGCGACGATGCAACCAAAGCCTC GCACAGCTGCTACACATCCTACTTTGCTTCTCCTTAAGCAGCTTTTCGAC TTCTCTTCCTCATTGCTCCATTCTCTCGCTGATCCCTCCCCAGTTGGCTC TGTCTCACTCCCTTCCGTCTGTCTGTGTGCCTGCCTGCCTTTGCTTCCTC ATCCGTCTGCCTTCCTATCGGTCCGCGCCCCTTACGCCGCGCTCTTTGCG GGGCCCGTGGGCGGGGGGTTGTTGACCGTGATCCATCGCCATCACCACCA CCACCATCATCATCGCCACTGCCACCACCGCCACCACCACCATCATCTCG GCCATGGGCAAGATTCGTCGTCAAGCCTTGGTCCCCCCAGTACCACTCTA TCTACCCCCGCTCCTTCCGTGACGCCGTGGTGATCGTGCTCATGGCCAAC GCCCGAGAGGATGCCTTGCCCGGCGTCCTGCCCCCGGCGCTCTGGATGGA GGTGCGTGCTTGTATCTGTGCCTTCGCCTGTGACTGTGGCTGCGGCTGCT CGTGTCGGTGATTCGCCATGGTTTACCGTTAATTGAATTCCGTGCCACAT CCACGTGTTTTTGTGTTTTATTTTCCGTGTCCAGTCTTGTCCTTCGCATA TGTTTCTGCACCAGCTTTTGGCTGTAAAGAGCCGATGGCCACATGCTTCA TGCTGGTTGACGTAGCTGCATGACGGGCCGAGGGTAGGACTCTTCCCGCC CACGTTTTCGTGACTTTATTACGGGTTACACACACACACACACACACGCC TCACCCCCCCGGTGCCGTAGATCATGGGCTTCGCCCGTAGGGACTGGTTT TCCGAGTCCGCCATCCTAGAGGAACGCCAGGCGAGGGCCCAGGCCGAGAG GGACGCCGTCGCCGCTGGAAAGGGCAAGGGCAAACGGAAAGGCAGGGAGG GCAGCGGAGGGGGCGGCAGCGGCATTTCTCCGTCGTCCATCTCGTCGGGG TGCCTCGGGGCGGCCAAGACGGTGGCGATGTTGCCGGTCAAGGCTGGAAA TGCGGCGGCTTCACAGGTGAAGATGGGAGACAGGCTTGTACTCCTCAGGC GGTTCTTTGCTCGATTTTGACAAAATCACTTTGGTCTTACACAAGCTTGA TTGAGAAGTCTCCCCCCCCCCGTCAAAAATCACTTATCAACTACGGTGTG ATAGCCTAACGAGTGAGAGCGCACGACACCGAGAGAGAGGGGAGGGAAGA GGGAGAAAGAAGGAAAGGGGGGGAGAGAGGGAGGGGGAGCGGGAGGGGCG AGGGAGGAAGAGAAACACAAGAACGCGGAAGTAGAGTTCGTGGGTCAGTC CTTTTCTCGCCTCCATCTTGTCCTCTCCCCCTACCTCTCTCCTCTTCTCT GCCGCGGTCGGTTTCCTGCTGAACGACAAATTACCGGGTAACGGCAAAGT ACGTCAACGAAATCATGACATTGCTTCTGGCGTGCAAGTATTGTGTCTGG AAGAAAAACGAGAACAGACACGCAGAATCGGTCAGGAAAAGGACGGTGCG TTGTCGACGAGGGCGTGATGCGTGTGGTGCGTGGTACTAGCGGTTTGCCT ACACGCGGTTGCCGCCGGACCAACGGGGGGCAATACATTGGTCGATGCTG TGTCAAAGCGGTATTCTCGGACATCATGCCTGTGCCCCTCGAGCGTCGGA ACGCAGCTCATGCAACACATGGTTGGAGGAGATTCACCCTTGGTACTGAG ATGGTGTGAGTATGACACGGCCGGCGGGGGCGGGAAACGATTCAAATGCT CACGGCACCCGCTAGAGCAGCGCCGAGGCGAGAGCCGGGAGGGGTTTTTC GGAGGAAGGGCAGAGAGTGGGGTATTCGGGGTTGAGCCAGCGGCTGTTTC TTTGTCCTAGAGGGGTGGGTGCCCTATGTCGATGCACGTGTTTTCATATT TACCCGCTGTCTTGCCCCTCTTCCCGACTGCTGGGAAGCAGGGGGCGATC GGCCACGACGATGGGGGTCAGCGGATCGGCCTGCCTGCAAGCTGATTGCC TGGAAGCGCCGGCACCGACGCGGCTGATCTCCCATCCCTCCGCTTTTGTC TGTTGTTCCGTCGTTTTCTGTGGGTGTGACCACTTCGATTGCAACAATTC CAGCGGTCCTTGCCTGCCCCACGCCCCTGCTCTACCCTCACCCGCCTGCT CTGATGCCATACACGCCGCTTTTTTGCATTACCCTCGCTTATCCACCACC CACCCACTGTCCCCCCTCATCCCCCCCCCCCGTCCCTCTATTTTCGTGTG CCCATCGCAGATTGGCTGTCCTGTCAGCTAAACACTCGGCAGTCAGCACC CGCCACAGCAGTGCTTGCTTCACATACGCATGCGGCGTTTTCCCATCCGC CGCGGTCCATGTGATTTCATTTCGACTGTTTCTTTTGCTATCTTGACGGA GCGCGGGG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig19:1770604..1779761-

>mRNA_P-fluviatile_contig19.3580.1 ID=mRNA_P-fluviatile_contig19.3580.1|Name=mRNA_P-fluviatile_contig19.3580.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2226bp|location=Sequence derived from alignment at P-fluviatile_contig19:1770604..1779761- (Porterinema fluviatile SAG_2381)
ATGATGCTGCCGCGGAGCAATGACGACCTGGTGGAGTACATGCAGAAGCA
CGGCATGGTCAAGACCCCCGCCATACTCGAGGCCTTCCGTGCCGTGGACA
GGGGAGACTTCGCCACACCCCAGTTGACACAGATGATGCTGCCGCGGAGC
AATGACGACCTGGTGGAGTACATGCAGAAGCACGGCATGGTCAAGACCCC
CGCCATACTCGAGGCCTTCCGTGCCGTGGACAGGGGAGACTTCGCCACAC
CCCAGTTGACACAGGTGGCCTACTTGAATCGACCGGTTCAAGACGGCCCG
GTCCATCTGTCCGCTCCGTTCATCTACGCGGACGCGCTCGAGGAGCTCAA
ACCCAAGCCGGGCATGTCCTTCTTAAACATCGTGGCCTACTTGAATCGAC
CGGTTCAAGACGGCCCGGTCCATCTGTCCGCTCCGTTCATCTACGCGGAC
GCGCTCGAGGAGCTCAAACCCAAGCCGGGCATGTCCTTCTTAAACATCGG
GTGCGGGACCGGCTACCTGTCGTACCTTGTGTCCATGCTCCTCGGGGAGA
GGGGCCAGAACCACGGTGTTGAGCTGAACGAGGCCCTTCTCGAGCACGCC
GCCCGATGCATCGCCGCCACCGACGAGAGGCTAGGACGCAAGACGGACAT
ACAGATCCTCCGCGGGAACGGCCTCAACGTGGTGGTGGACTCCGGAGGCG
GGGGTGCGGGACCGGCTACCTGTCGTACCTTGTGTCCATGCTCCTCGGGG
AGAGGGGCCAGAACCACGGTGTTGAGCTGAACGAGGCCCTTCTCGAGCAC
GCCGCCCGATGCATCGCCGCCACCGACGAGAGGCTAGGACGCAAGACGGA
CATACAGATCCTCCGCGGGAACGGCCTCAACGTGGTGGTGGACTCCGGAG
GCGGGTACGACTGCGTGTACGTCGGCGCGGGTTGCGATCCGGACCTGACG
CTGCCGTACCTACAGGGCCTCCTCAACGTCGGCGGCGTGATGGTGGCGCC
GTTCCGCGAGGAACTCGTGCGCGTGGAGGTACGACTGCGTGTACGTCGGC
GCGGGTTGCGATCCGGACCTGACGCTGCCGTACCTACAGGGCCTCCTCAA
CGTCGGCGGCGTGATGGTGGCGCCGTTCCGCGAGGAACTCGTGCGCGTGG
AGCGCTTGGAGGACGGATCCTTCAGCAGCCGGACCCTGTGCAACGTGTGC
TTTTCGCCGATCGCCATGCCGACATCCCCCTCCGCCGGATCCAAGAAGAA
CGGTGGAACTCCTGTTGGACCTCCGGCCGTGAGCGCTTGGAGGACGGATC
CTTCAGCAGCCGGACCCTGTGCAACGTGTGCTTTTCGCCGATCGCCATGC
CGACATCCCCCTCCGCCGGATCCAAGAAGAACGGTGGAACTCCTGTTGGA
CCTCCGGCCGTGAGATTCGTCGTCAAGCCTTGGTCCCCCCAGTACCACTC
TATCTACCCCCGCTCCTTCCGTGACGCCGTGGTGATCGTGCTCATGGCCA
ACGCCCGAGAGGATGCCTTGCCCGGCGTCCTGCCCCCGGCGCTCTGGATG
GAGATTCGTCGTCAAGCCTTGGTCCCCCCAGTACCACTCTATCTACCCCC
GCTCCTTCCGTGACGCCGTGGTGATCGTGCTCATGGCCAACGCCCGAGAG
GATGCCTTGCCCGGCGTCCTGCCCCCGGCGCTCTGGATGGAGATCATGGG
CTTCGCCCGTAGGGACTGGTTTTCCGAGTCCGCCATCCTAGAGGAACGCC
AGGCGAGGGCCCAGGCCGAGAGGGACGCCGTCGCCGCTGGAAAGGGCAAG
GGCAAACGGAAAGGCAGGGAGGGCAGCGGAGGGGGCGGCAGCGGCATTTC
TCCGTCGTCCATCTCGTCGGGGTGCCTCGGGGCGGCCAAGACGGTGGCGA
TGTTGCCGGTCAAGGCTGGAAATGCGGCGGCTTCACAGATCATGGGCTTC
GCCCGTAGGGACTGGTTTTCCGAGTCCGCCATCCTAGAGGAACGCCAGGC
GAGGGCCCAGGCCGAGAGGGACGCCGTCGCCGCTGGAAAGGGCAAGGGCA
AACGGAAAGGCAGGGAGGGCAGCGGAGGGGGCGGCAGCGGCATTTCTCCG
TCGTCCATCTCGTCGGGGTGCCTCGGGGCGGCCAAGACGGTGGCGATGTT
GCCGGTCAAGGCTGGAAATGCGGCGGCTTCACAGATTGGCTGTCCTGTCA
GCTAAATTGGCTGTCCTGTCAGCTAA
back to top