mRNA_P-fluviatile_contig19.3575.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig19.3575.1
Unique NamemRNA_P-fluviatile_contig19.3575.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig19.3575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig19contigP-fluviatile_contig19:1726406..1728486 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categorychloroplast
Exons2
Model size890
Cds size609
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig19.3575.1prot_P-fluviatile_contig19.3575.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig19 1727878..1728486 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815786.9068098-UTR-P-fluviatile_contig19:1726405..17265211622815786.9068098-UTR-P-fluviatile_contig19:1726405..1726521Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 1726406..1726521 +
1693563305.3614912-UTR-P-fluviatile_contig19:1726405..17265211693563305.3614912-UTR-P-fluviatile_contig19:1726405..1726521Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 1726406..1726521 +
1622815786.9241223-UTR-P-fluviatile_contig19:1727713..17278771622815786.9241223-UTR-P-fluviatile_contig19:1727713..1727877Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 1727714..1727877 +
1693563305.3694377-UTR-P-fluviatile_contig19:1727713..17278771693563305.3694377-UTR-P-fluviatile_contig19:1727713..1727877Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 1727714..1727877 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815786.9384415-CDS-P-fluviatile_contig19:1727877..17284861622815786.9384415-CDS-P-fluviatile_contig19:1727877..1728486Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1727878..1728486 +
1693563305.3783944-CDS-P-fluviatile_contig19:1727877..17284861693563305.3783944-CDS-P-fluviatile_contig19:1727877..1728486Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1727878..1728486 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig19.3575.1

>prot_P-fluviatile_contig19.3575.1 ID=prot_P-fluviatile_contig19.3575.1|Name=mRNA_P-fluviatile_contig19.3575.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=203bp
MAAAAAAFVSIPGTLMSAPAGTSAVVTMTSGLTTAAAAVAATGAGARRVQ
PRELPHRRPRRRTAVASLERASRDGPGAMMKMMAEAGQTTAAGVAPAVGR
NGIGGVFAAAMTGSSGRCLGRVLGHSDLRLNCRRQPAAANGPPGRGSTLA
APRMKTSGVALAAHQSPCSTVELKAGGGGGRKSGTRGVNRPSRVRGRGGG
SVS
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mRNA from alignment at P-fluviatile_contig19:1726406..1728486+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig19.3575.1 ID=mRNA_P-fluviatile_contig19.3575.1|Name=mRNA_P-fluviatile_contig19.3575.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2081bp|location=Sequence derived from alignment at P-fluviatile_contig19:1726406..1728486+ (Porterinema fluviatile SAG_2381)
CATCAATGTGATGTATCCCCTCGTTGCTGCTTGGCACCGCGCCGTGCGTA
TCTGGTCGCGAGCAGTGTGTGACGGGGAGTCGCGAGGACGGCAGGACACC
ACCAGCTATTGACGAGGTAGATAGCTGCAGTCCTCGTTGTGTTTTTGAAC
ACGAGTGATGAGTGTGACTCTTAAGTCGGTTTTTCGGCCATCTTTCGCAT
TGCATGCAAGAGATAACTTTTGATGCCCAGCAGAGCTTCAGCAGCTTTGG
CCAAAAGATCGAGCTGAGCGATGGCTCCTCACACTTATCACTTCCGCGGA
TGTTTGACGCAACATAATGCTCTCTCACTCTGGCTTGATTACGGGTTGTC
CTGGCTTCTTCGAGGATCTTGTTTCGGTGACTGATAGGCTCCGTCGTGAT
TTGAACATGAGGTGTCGTGCTCGGTATGCAGCGTAGGCAGCAGCGCAGTG
GAAGGGTATGCTTCGTTGCGTGGAAATGCTCATCAGATCATGAGCTGGTT
TTTGCCTGTGTCAGATAGATCGACCAATTTAACAATGCTTTACCTGCGAT
TGTTGATCGCTCTCAAACATGCCATCGTCGAGAGGCAGTGGAAATATCTC
TAATGTCTTGTTTTGACACGGTCGCGGGACGCCCCTGTTTGATAAAGGCT
TATCCATTTGACCACCCAGTCAGGGCTGACTGAGTGGTCAAATGGATAAT
CCTTTATCAAACAAAAGATATGTCTCGGCTCGCTGACTGAGTGGTCAAAT
GGATAAGCCTTTATCAAACAGCCCCTGACCGCCCGTGTGTCGGTACTCTT
TCGGCGCACACTCCGGTGCATTCCCGTTCACAGCAGTCAGGGCCGCCAGG
ATGTGCAGAAGGCAGGAGAGATTAGAGGGAATTTGGTCATCAGCGCAGAT
TGAAAATCAATCAATATTTTTACGCGCACACTCGACATAGCGGTCGACGA
GGGAAAGGGACGGCTGACCCCTTCTCGCGATAAAAATGAAGGCAAGCGCC
GCAGGAGGAAGGTGGGCCCAGGGGCACAAAAAGACGAAGAAAAAAAGAGA
AGGAAAAAGAAAAAAGTCCCGGTGTTTAcCCCCTCCTGTGTGACCACGGT
TTGTTCTAGCTGGACAGAAAAATACACTGAACAAGTGTAGTCCTCTAAAT
ACGCTGCAAAGTGTAGTACACGTCTCGCCTTGATCGGAGGGACTGCTGCC
AATAATGTGACGAAAACACAACACACCGTTAGTGTATGTCCGCACACGTT
TCGTGATCGAGTTTGTCAACAAGACAATACATCCCCACTCAAATGTCTGT
CTGTGCAGGTGGAAAGGGCGAAGAAGACGCTTCTACGAGGTGGCATTGCC
AGCACAGGGAGTCAAATTTGCGGGTGCAGCAGCAGCAGCTGGAACAGGAA
CAGCTGCCGCGCGAGCAGCAGGAGTTTTGCGGCTCCGTTACGCCGTAAAG
AAAAAATTTAGGAGTACCAGCGATGGCGGCGGCGGCGGCGGCGTTCGTCT
CCATTCCAGGAACGCTCATGTCTGCACCAGCCGGCACCTCCGCAGTAGTC
ACAATGACTTCCGGGCTGACAACAGCCGCAGCGGCGGTGGCGGCGACGGG
GGCGGGTGCTCGGCGGGTGCAGCCTCGTGAGCTCCCGCATCGGCGGCCGC
GGCGGCGGACAGCCGTCGCCTCCTTGGAGAGAGCATCGCGTGACGGCCCG
GGGGCGATGATGAAGATGATGGCGGAAGCAGGGCAAACAACCGCGGCGGG
CGTGGCACCAGCGGTTGGAAGAAACGGGATCGGCGGGGTCTTCGCCGCCG
CCATGACGGGAAGTAGCGGAAGGTGTCTCGGTCGCGTTCTTGGTCACAGC
GACCTTCGTCTAAATTGTCGCCGACAGCCGGCCGCTGCGAACGGCCCACC
AGGAAGAGGATCGACTTTAGCAGCACCGAGAATGAAGACTTCGGGCGTGG
CGTTGGCGGCGCACCAAAGCCCCTGCAGCACCGTCGAACTCAAAGCGGGC
GGCGGCGGTGGCCGGAAATCGGGCACGAGAGGAGTCAACAGACCGAGCCG
GGTGCGCGGGAGGGGTGGCGGTAGTGTATCT
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Coding sequence (CDS) from alignment at P-fluviatile_contig19:1726406..1728486+

>mRNA_P-fluviatile_contig19.3575.1 ID=mRNA_P-fluviatile_contig19.3575.1|Name=mRNA_P-fluviatile_contig19.3575.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1218bp|location=Sequence derived from alignment at P-fluviatile_contig19:1726406..1728486+ (Porterinema fluviatile SAG_2381)
ATGGCGGCGGCGGCGGCGGCGTTCGTCTCCATTCCAGGAACGCTCATGTC
TGCACCAGCCGGCACCTCCGCAGTAGTCACAATGACTTCCGGGCTGACAA
CAGCCGCAGCGGCGGTGGCGGCGACGGGGGCGGGTGCTCGGCGGGTGCAG
CCTCGTGAGCTCCCGCATCGGCGGCCGCGGCGGCGGACAGCCGTCGCCTC
CTTGGAGAGAGCATCGCGTGACGGCCCGGGGGCGATGATGAAGATGATGG
CGGAAGCAGGGCAAACAACCGCGGCGGGCGTGGCACCAGCGGTTGGAAGA
AACGGGATCGGCGGGGTCTTCGCCGCCGCCATGACGGGAAGTAGCGGAAG
GTGTCTCGGTCGCGTTCTTGGTCACAGCGACCTTCGTCTAAATTGTCGCC
GACAGCCGGCCGCTGCGAACGGCCCACCAGGAAGAGGATCGACTTTAGCA
GCACCGAGAATGAAGACTTCGGGCGTGGCGTTGGCGGCGCACCAAAGCCC
CTGCAGCACCGTCGAACTCAAAGCGGGCGGCGGCGGTGGCCGGAAATCGG
GCACGAGAGGAGTCAACAGACCGAGCCGGGTGCGCGGGAGGGGTGGCGGT
AGTGTATCTATGGCGGCGGCGGCGGCGGCGTTCGTCTCCATTCCAGGAAC
GCTCATGTCTGCACCAGCCGGCACCTCCGCAGTAGTCACAATGACTTCCG
GGCTGACAACAGCCGCAGCGGCGGTGGCGGCGACGGGGGCGGGTGCTCGG
CGGGTGCAGCCTCGTGAGCTCCCGCATCGGCGGCCGCGGCGGCGGACAGC
CGTCGCCTCCTTGGAGAGAGCATCGCGTGACGGCCCGGGGGCGATGATGA
AGATGATGGCGGAAGCAGGGCAAACAACCGCGGCGGGCGTGGCACCAGCG
GTTGGAAGAAACGGGATCGGCGGGGTCTTCGCCGCCGCCATGACGGGAAG
TAGCGGAAGGTGTCTCGGTCGCGTTCTTGGTCACAGCGACCTTCGTCTAA
ATTGTCGCCGACAGCCGGCCGCTGCGAACGGCCCACCAGGAAGAGGATCG
ACTTTAGCAGCACCGAGAATGAAGACTTCGGGCGTGGCGTTGGCGGCGCA
CCAAAGCCCCTGCAGCACCGTCGAACTCAAAGCGGGCGGCGGCGGTGGCC
GGAAATCGGGCACGAGAGGAGTCAACAGACCGAGCCGGGTGCGCGGGAGG
GGTGGCGGTAGTGTATCT
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