mRNA_P-fluviatile_contig19.3546.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig19.3546.1
Unique NamemRNA_P-fluviatile_contig19.3546.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig19.3546.1 vs. uniprot
Match: D8LSC7_ECTSI (Cytochrome b561 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC7_ECTSI)

HSP 1 Score: 466 bits (1199), Expect = 4.480e-160
Identity = 237/281 (84.34%), Postives = 254/281 (90.39%), Query Frame = 1 
Query:    1 MEALLQKLKVVLDKITTARARLVTASKSPVWAKPRFLTHLMGPLIAATVVGSTFAKIERLNLFSLHATCMSLAFVVFMPEGVVAYRNHLLLDSLSPIMSNGIKAKKRTIHLTLQVLASMFAGLGLFFIAGNKVYKRNNILPQTVHGVLGTITLLAMVMQVVVGRLKYASFTSGVVDARNRGKRYRWHGKMGLLLYDLSTVSFVLGVWAFFGASVVAVLVPLMVAYAWLNVNLQMHETKHITVPVYSEEADAQAGESLVTPETKQLTEEGVPESKGEREYPL 843
            ME L+QK+KVVLDKITTARAR+V ASKSP W KPRFLTH+MGP+IA  V+ STF+K E LNLFSLHATCM+LAFVV MPEGVVAYRNHLLLDSLSPIMSNG KAKKRTIHLTLQVLASMFA LGLFFIAGNKVY RN+ILP+T HGV+G ITLLAMVMQVVVGRLK+ SFTSGV+DARNRGK+YRWHGKMGLLLYDLSTVS VLG+W FFG SVVAV+VPLM+AYAWLNVNLQMHETKHITVPVYSE  D  AGE L  PETKQL EEGVPESKGEREYPL
Sbjct:    1 MEGLMQKMKVVLDKITTARARVVAASKSPAWVKPRFLTHIMGPVIALIVIASTFSKTESLNLFSLHATCMALAFVVLMPEGVVAYRNHLLLDSLSPIMSNGTKAKKRTIHLTLQVLASMFAALGLFFIAGNKVYHRNSILPRTWHGVVGAITLLAMVMQVVVGRLKHMSFTSGVIDARNRGKKYRWHGKMGLLLYDLSTVSVVLGLWTFFGLSVVAVVVPLMLAYAWLNVNLQMHETKHITVPVYSEGTDDPAGEKLTAPETKQLEEEGVPESKGEREYPL 281
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BLAST of mRNA_P-fluviatile_contig19.3546.1 vs. uniprot
Match: A0A6H5L675_9PHAE (Cytochrome b561 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L675_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 4.710e-103
Identity = 160/189 (84.66%), Postives = 172/189 (91.01%), Query Frame = 1 
Query:    1 MEALLQKLKVVLDKITTARARLVTASKSPVWAKPRFLTHLMGPLIAATVVGSTFAKIERLNLFSLHATCMSLAFVVFMPEGVVAYRNHLLLDSLSPIMSNGIKAKKRTIHLTLQVLASMFAGLGLFFIAGNKVYKRNNILPQTVHGVLGTITLLAMVMQVVVGRLKYASFTSGVVDARNRGKRYRWHGK 567
            ME L+QKLKVVLDKITTARAR+V A KSP W KPRFLTH+MGP+IA  V+ STF+K E LNLFSLHATCM+LAFVV MPEGVVAYRNHLLLDSLSPIMSNG KAKKRTIHLTLQVLASMFA LGLFFIAGNKVY RN+ILP+T HGV+G ITLLAMVMQVVVGRLK+ SFTSGV+DARNRGKRYRWHGK
Sbjct:    1 MEGLMQKLKVVLDKITTARARVVAAFKSPAWVKPRFLTHIMGPVIAVIVIASTFSKTESLNLFSLHATCMALAFVVLMPEGVVAYRNHLLLDSLSPIMSNGTKAKKRTIHLTLQVLASMFAALGLFFIAGNKVYHRNSILPRTWHGVVGAITLLAMVMQVVVGRLKHMSFTSGVIDARNRGKRYRWHGK 189
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BLAST of mRNA_P-fluviatile_contig19.3546.1 vs. uniprot
Match: A0A836C9M8_9STRA (Cytochrome b561 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9M8_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.910e-49
Identity = 106/274 (38.69%), Postives = 153/274 (55.84%), Query Frame = 1 
Query:    7 ALLQKLKVVLDKITTARARLVTASKSPVWAKPRFLTHLMGPLIAATVVGSTFAKIERLNLFSLHATCMSLAFVVFMPEGVVAYRNHLLLDSLSPIMSNGIKAKKRTIHLTLQVLASMFAGLGLFFIAGNKVYKRNNILPQTVHGVLGTITLLAMVMQVVVGRLKYASFTSGVVDARNRGKRYRWHGKMGLLLYDLSTVSFVLGVWAFFGASVVAVLVP-LMVAYAWLNVNLQMHETKHITVPVYSEEADAQAGESLVTPETKQLTEEGVPESKG 825
            A+ + L+  LD+ T  R RL ++  +P W KP+++TH++      T+V          ++FS H   MSL F++ M  GV+AYRN  LLD LSPIM +G   K RT+H+T Q  A  F  LGL FI  +K+   + ++P ++H VLG+  L+A  +QV VG+LKY S T      R + ++  WHGKMGLLLYD++ V+ + G+WA  G   ++ LV  LM+   W+N+N QM E +   V  YS          L T +T    EE   E  G
Sbjct:    4 AVSENLRAALDETTVRRTRLFSSFTTPKWLKPKYMTHVLAAANVITIVVIVAIHERTFSVFSFHPLFMSLGFLMCMSLGVIAYRNKFLLDLLSPIMMHGPTTKSRTMHITFQSFAGGFILLGLLFIVASKLKHGSTVVPHSIHAVLGSAVLVATAVQVTVGKLKYDSLT------RRQERKQLWHGKMGLLLYDVAAVTILTGLWALVGVVTLSSLVMMLMLVLLWVNINYQMSEPRPPDVAPYS---------GLNTDDTALAAEESKAEEDG 262
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BLAST of mRNA_P-fluviatile_contig19.3546.1 vs. uniprot
Match: W7TJN5_9STRA (Cytochrome b-561 domain containing 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJN5_9STRA)

HSP 1 Score: 140 bits (353), Expect = 8.940e-34
Identity = 82/227 (36.12%), Postives = 118/227 (51.98%), Query Frame = 1 
Query:   37 DKITTARARLVTASK--SPVWAKPRFLTHLMGPLIAATVVGSTFAKIERLNLFSLHATCMSLAFVVFMPEGVVAYRNHLLLDSLSPIMSNGIKAKKRTIHLTLQVLASMFAGLGLFFIAGNKVYKRNNILPQTVHGVLGTITLLAMVMQVVVGRLKYASFTSGVVDARNR---GKRYRWHGKMGLLLYDLSTVSFVLGVWAFFGASVVAVLVPLMVAYAWLNVNLQM 702
            D +T  R   V   K   P+  +   + HL    +   + G + A+   L LFS H   MS+  V+FM EG++AYRNH     LSPIM N  + K + IH    +LA++   +G+ FI  NKV K   ILP ++H  LG +    MV+Q++ G  K  +  SGV+    R   G  YRWHGK GL+LYD++  +   G+    G  ++  L+ L V   W  V+LQM
Sbjct:   36 DAVTELRRNFVARLKILDPL-VESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGFGLITFLMVLHVCLVWFMVHLQM 261
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BLAST of mRNA_P-fluviatile_contig19.3546.1 vs. uniprot
Match: A0A4D9CVZ3_9STRA (Cytochrome b561 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVZ3_9STRA)

HSP 1 Score: 138 bits (348), Expect = 5.930e-33
Identity = 83/228 (36.40%), Postives = 118/228 (51.75%), Query Frame = 1 
Query:   34 LDKITTARARLVTASK--SPVWAKPRFLTHLMGPLIAATVVGSTFAKIERLNLFSLHATCMSLAFVVFMPEGVVAYRNHLLLDSLSPIMSNGIKAKKRTIHLTLQVLASMFAGLGLFFIAGNKVYKRNNILPQTVHGVLGTITLLAMVMQVVVGRLKYASFTSGVVDARNR---GKRYRWHGKMGLLLYDLSTVSFVLGVWAFFGASVVAVLVPLMVAYAWLNVNLQM 702
            LD +T  R   V   K   P+  +   + HL    +   + G + A+   L LFS H   MS+  V+FM EG++AYRNH     LSPIM N  + K + IH    +LA++   LG+ FI  NKV K   ILP ++H  LG +    MV+Q++ G  K  +  SGV+    R   G  +RWHGK GL+LYD++  +   GV    G  ++   + L V   W  V+LQM
Sbjct:   48 LDNVTELRRNFVARLKILDPL-VESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVLGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGIGRDGGGVLHRWHGKAGLILYDVAMATVATGVVKSLGFGLMTFFMVLHVCLVWFMVHLQM 274
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BLAST of mRNA_P-fluviatile_contig19.3546.1 vs. uniprot
Match: A0A7S2SRB3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRB3_9STRA)

HSP 1 Score: 115 bits (287), Expect = 7.300e-25
Identity = 65/206 (31.55%), Postives = 110/206 (53.40%), Query Frame = 1 
Query:  106 FLTHLMGPLIAATVVGSTFAKIERLNLFSLHATCMSLAFVVFMPEGVVAYRNHLLLDSLSPIMSNGIKAKKRTIHLTLQVLASMFAGLGLFFIAGNKVYKRNNILPQTVHGVLGTITLLAMVMQVVVGRLKYASFTSGVVDARNRGKRYRWHGKMGLLLYDLSTVSFVLGVWAFFGASVVAVLVPLMVAYAWLNVNLQ--MHETKH 717
            + TH++   +A  ++ +        +LFS H   M++  VVFM EG + YRN  L+ + SPIM    K++ R+IH T+Q+ A +F+ +G+ FI  NK     +  P T+H  +GT+ LL M++Q +VG  K          +R+    +RWHG  G + +DL+ ++ + G  +F     ++  +   +A  WL+  LQ  + E KH
Sbjct:   64 YFTHILAIPLAVLLIVAVLITTRTFSLFSFHPIFMTVGCVVFMSEGFLVYRNGTLVSTFSPIMGGSSKSQARSIHATMQISAVIFSFIGVMFILANKARLGKSFTPATLHSWIGTLALLFMLIQGLVGLAK----------SRSSSPVHRWHGSAGKVTFDLAMLAVISGSISFLPTGFLSTFIVTALAVLWLSSQLQFAISEQKH 259
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BLAST of mRNA_P-fluviatile_contig19.3546.1 vs. uniprot
Match: A0A482SE52_9ARCH (Cytochrome b561 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SE52_9ARCH)

HSP 1 Score: 75.1 bits (183), Expect = 6.210e-12
Identity = 46/134 (34.33%), Postives = 76/134 (56.72%), Query Frame = 1 
Query:  319 RTIHLTLQVLASMFAGLGLFFIAGNKVYKRNNILPQTVHGVLGTITLLAMVMQVVVGRLKYASFTSGVVDARNRGKRYRWHGKMGLLLYDLSTVSFVLGVWAFFGASVVAVLVPLMVAYAWLNVNLQMHETKHI 720
            R IH + Q + + F  LGL FI  NK      I+P T+H V GTI ++A+ +Q  +G+ K       +++   R   YRWHG MGL+L+D+  ++ VLG+ +F   S  ++LV ++   A   V+LQ+  + ++
Sbjct:    8 RAIHQSSQFIGASFMLLGLLFILANKFDYEKTIIPHTLHSVAGTICIIAVGVQAFIGQSKI----DRLLETHRR--IYRWHGDMGLVLWDILCITTVLGLASFLPFSFFSLLVLMLPLVACTVVHLQLQSSGYL 135
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BLAST of mRNA_P-fluviatile_contig19.3546.1 vs. uniprot
Match: A0A6G0WDI2_9STRA (Cytochrome b561 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDI2_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.060e-11
Identity = 65/228 (28.51%), Postives = 114/228 (50.00%), Query Frame = 1 
Query:   34 LDKITTARARLVTASKSPVWAKPRFLTHLMGPL----IAATVVGSTFAKIER-LNLFSLHATCMSLAFVVFMPEGVVAYRNHLLLDSLSPIMSNGIKAKKRTIHLTLQVLASMFAGLGLFFIAGNKVYKRNNILPQTVHGVLGTITLLAMVMQVVVGRLKYASFTSGVVDARNRGKR-YRWHGKMGLLLYDLSTVSFVLGVW-------AFFGASVVAV-LVPLMVAY 675
            +D  +   A    +S   +W   R +T    PL     AA V  +    + R LNLF LHA CMS+ +V F  E ++ +R     +  SP      +  +R IH  +   A +F  LGL  I  ++     +++P  +H  +G++ +L +++Q+V+G  K             +G+R +R+HGK+G L Y LS ++ +LG++       A+   +VVA+ ++P++ AY
Sbjct:   33 IDDGSVHHASFSYSSSKVIW---REVTQNTTPLTWLAFAAAVAIAVGVIVHRGLNLFFLHAMCMSIGYVAFATEAMLVFRPFPSWNVRSPN-----QRVQRNIHRFMNQAAGIFTILGLVAICVHRWSNGKSLIPHGIHSWMGSLVILLILVQIVIGHKKLNLLLF-------QGQRSFRFHGKLGRLTYALSILTVILGIFHIYKNYMAYVWTAVVALPVIPVIYAY 245
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BLAST of mRNA_P-fluviatile_contig19.3546.1 vs. uniprot
Match: A0A7S1CMU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMU4_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.890e-11
Identity = 64/210 (30.48%), Postives = 97/210 (46.19%), Query Frame = 1 
Query:   55 RARLVTASKSPVWAKPRFLTHLMGPLIAATVVGSTFAKIERLNLFSLHATCMSLAFVVFMPEGVVAYRNHLLLDSLSPIMSNGIKAKKRTIHLTLQVLASMFAGLGLFFIAGNKVYKRNNILPQTVHGVLGTITLLAMVMQVVVGRLKYASFTSGVVDARNRGKRYRWHGKMGLLLYDLSTVSFVLGVWAFFG-----ASVVAVLVPLMV 669
            R+R   A + P W   R +   +G + AA V     A +    LFS H   M  A V+ +   +  Y +           +      +R  H  L + A   A +G+  I GNKV +   ++P ++H  +G  T++A+V+Q  VGR+K        ++A  R K YRWHG++G L       + VLG W FFG     A V+A +  LMV
Sbjct:   52 RSRSAAAPRGPSWL--RLMAVGVGVVWAACVGAEVVAVVGWATLFSFHPLPMLAACVLAVAATMTYYGD---------AKTEADVQAQRAQHRVLMMGAVGCAVVGMLAIFGNKVQRGKTLVPTSLHAWVGAATMVAVVVQAAVGRMK--------IEALPR-KVYRWHGQLGALTLAGLLAAAVLGAWKFFGEDRRIAGVLAAIGGLMV 241
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BLAST of mRNA_P-fluviatile_contig19.3546.1 vs. uniprot
Match: UPI00168D57BD (cytochrome b561 domain-containing protein 1 isoform X2 n=1 Tax=Oryzias melastigma TaxID=30732 RepID=UPI00168D57BD)

HSP 1 Score: 57.8 bits (138), Expect = 4.810e-6
Identity = 58/176 (32.95%), Postives = 84/176 (47.73%), Query Frame = 1 
Query:  181 NLFSLHATCMSLAFVVFMPEGVVAYRNHLLLDSLSPIMSNGIKAKKRTIHLTLQVLASMFAGLGLFFIAGNKVYKRNNILPQTVHGVLGTITLLAMVMQVVVGRLKYASFTSGVVDARNRGKRYRWHGKMGLLLYDLSTVSFVLGVWA-FFGASV------VAVLVPLMVAYAWLN 687
             LFS H  CM++AF VFM EGV+     L     SP      K K R +H   QVL    A  GL FI  +K    +  L    H +LG+ TL + ++Q V G     +F   +  +    +   +H   GLL+Y L+TV+ V  +++ +F ASV      V +L+P   A   +N
Sbjct:    4 GLFSWHPVCMTVAFCVFMTEGVL-----LFSAEGSPFCFKSRKGKVR-VHWLCQVLVLTAAATGLGFIVASKSVSEHPHLTSW-HSLLGSCTLASTLLQAVFGIS--VTFHKELHLSLPPSRLKLYHATCGLLVYLLATVTVVSALFSDWFQASVKGPVWWVLLLLPFFPALVVMN 170
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig19.3546.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LSC7_ECTSI4.480e-16084.34Cytochrome b561 domain-containing protein n=1 Tax=... [more]
A0A6H5L675_9PHAE4.710e-10384.66Cytochrome b561 domain-containing protein n=1 Tax=... [more]
A0A836C9M8_9STRA2.910e-4938.69Cytochrome b561 domain-containing protein n=1 Tax=... [more]
W7TJN5_9STRA8.940e-3436.12Cytochrome b-561 domain containing 1 n=1 Tax=Nanno... [more]
A0A4D9CVZ3_9STRA5.930e-3336.40Cytochrome b561 domain-containing protein n=2 Tax=... [more]
A0A7S2SRB3_9STRA7.300e-2531.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482SE52_9ARCH6.210e-1234.33Cytochrome b561 domain-containing protein n=1 Tax=... [more]
A0A6G0WDI2_9STRA2.060e-1128.51Cytochrome b561 domain-containing protein n=1 Tax=... [more]
A0A7S1CMU4_9STRA6.890e-1130.48Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
UPI00168D57BD4.810e-632.95cytochrome b561 domain-containing protein 1 isofor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig19contigP-fluviatile_contig19:1499494..1506203 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCytochrome b561 domain
Ec32 orthologEc-21_003210.1
Exons7
Model size1662
Cds size846
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig19.3546.1prot_P-fluviatile_contig19.3546.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig19 1499494..1505387 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815803.3601267-CDS-P-fluviatile_contig19:1499493..14995741622815803.3601267-CDS-P-fluviatile_contig19:1499493..1499574Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1499494..1499574 +
1693563361.582801-CDS-P-fluviatile_contig19:1499493..14995741693563361.582801-CDS-P-fluviatile_contig19:1499493..1499574Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1499494..1499574 +
1622815803.3735523-CDS-P-fluviatile_contig19:1501362..15014751622815803.3735523-CDS-P-fluviatile_contig19:1501362..1501475Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1501363..1501475 +
1693563361.5924644-CDS-P-fluviatile_contig19:1501362..15014751693563361.5924644-CDS-P-fluviatile_contig19:1501362..1501475Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1501363..1501475 +
1622815803.3869827-CDS-P-fluviatile_contig19:1501902..15020501622815803.3869827-CDS-P-fluviatile_contig19:1501902..1502050Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1501903..1502050 +
1693563361.612588-CDS-P-fluviatile_contig19:1501902..15020501693563361.612588-CDS-P-fluviatile_contig19:1501902..1502050Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1501903..1502050 +
1622815803.4003437-CDS-P-fluviatile_contig19:1503465..15035761622815803.4003437-CDS-P-fluviatile_contig19:1503465..1503576Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1503466..1503576 +
1693563361.6240394-CDS-P-fluviatile_contig19:1503465..15035761693563361.6240394-CDS-P-fluviatile_contig19:1503465..1503576Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1503466..1503576 +
1622815803.41431-CDS-P-fluviatile_contig19:1504371..15044851622815803.41431-CDS-P-fluviatile_contig19:1504371..1504485Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1504372..1504485 +
1693563361.6334264-CDS-P-fluviatile_contig19:1504371..15044851693563361.6334264-CDS-P-fluviatile_contig19:1504371..1504485Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1504372..1504485 +
1622815803.4239125-CDS-P-fluviatile_contig19:1504687..15048191622815803.4239125-CDS-P-fluviatile_contig19:1504687..1504819Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1504688..1504819 +
1693563361.645292-CDS-P-fluviatile_contig19:1504687..15048191693563361.645292-CDS-P-fluviatile_contig19:1504687..1504819Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1504688..1504819 +
1622815803.4339888-CDS-P-fluviatile_contig19:1505240..15053871622815803.4339888-CDS-P-fluviatile_contig19:1505240..1505387Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1505241..1505387 +
1693563361.652728-CDS-P-fluviatile_contig19:1505240..15053871693563361.652728-CDS-P-fluviatile_contig19:1505240..1505387Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1505241..1505387 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815803.4457405-UTR-P-fluviatile_contig19:1505387..15062031622815803.4457405-UTR-P-fluviatile_contig19:1505387..1506203Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 1505388..1506203 +
1693563361.662324-UTR-P-fluviatile_contig19:1505387..15062031693563361.662324-UTR-P-fluviatile_contig19:1505387..1506203Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 1505388..1506203 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig19.3546.1

>prot_P-fluviatile_contig19.3546.1 ID=prot_P-fluviatile_contig19.3546.1|Name=mRNA_P-fluviatile_contig19.3546.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=282bp
MEALLQKLKVVLDKITTARARLVTASKSPVWAKPRFLTHLMGPLIAATVV
GSTFAKIERLNLFSLHATCMSLAFVVFMPEGVVAYRNHLLLDSLSPIMSN
GIKAKKRTIHLTLQVLASMFAGLGLFFIAGNKVYKRNNILPQTVHGVLGT
ITLLAMVMQVVVGRLKYASFTSGVVDARNRGKRYRWHGKMGLLLYDLSTV
SFVLGVWAFFGASVVAVLVPLMVAYAWLNVNLQMHETKHITVPVYSEEAD
AQAGESLVTPETKQLTEEGVPESKGEREYPL*
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mRNA from alignment at P-fluviatile_contig19:1499494..1506203+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig19.3546.1 ID=mRNA_P-fluviatile_contig19.3546.1|Name=mRNA_P-fluviatile_contig19.3546.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6710bp|location=Sequence derived from alignment at P-fluviatile_contig19:1499494..1506203+ (Porterinema fluviatile SAG_2381)
ATGGAGGCCCTATTGCAGAAACTGAAGGTGGTTCTGGACAAGATTACCAC
CGCAAGGGCGCGCTTGGTGACGGCTTCCAAGGTGTGTAGACACCGCTGGT
GAGCACACGAAGCTCCTGCACTAGCCATACGAACCCGCCATGTAATCGTA
AGCACCTAAAGGATGTAAGAACCTCCCTGTGTGATTACTTTTTGAATGAT
GGTGAGAAATACAACCAGGTAGCAAGCAGATGCAGGCTCCTGCCGGGTCC
GGTAGCGCGCGTGCCGCCATCATGCACAAACATCCACATGATATTCATCG
GTGAAGGGACAGATCGTCGCTTTGCACGTACATATGACTGAATGTACCCC
TCTCGGGCTTCATCAACGATGATACCATTTCCTCACGGCAGCGGCGCGCG
GAGAAAATACGACCGAAGCCGCGCACATACGAGAGTATTAAAGAGCCAGC
TCCTCTCTCCTTTGCTTCCGACAAGCGCAGGTGGCACCGGGCAAAAACGA
AAAATCTCCGAAATGTCATATTGCGCAAATAAACGGAAGGACAGGGTCTT
GTTCGCTCTCGGGTATCGCATGGTAGAGAGTGGAATTGCACGGCGTGTCT
GGTCTGCCCAGGTGTATCTTGGTGCAACAGGGAGATCTCGAGCCACAACA
TGATCGCATGATTTTCGGTCTCACCATCTCTGCGAGCGACGCGATTTCTG
CCTTCGAGCCTAGGCCCCCAAAATGCGTGCTCATCTCCGCTTGATATAGA
AATAATGTCCTAAACGTACAGGGTGACCAAACTTTCCATTGACGGTGATG
AGTCGTCGGGGTGTGTTCAGCTCCTCCCTTTTCGGCCGCGCGCTAAGAAA
GCGTCGCAGCGAAGCCATACAAGAGCGGTGAAAGGCTGCAGTGGTTTCCA
GGGCCGCGTTTCCGTGTGGAAAGCTGGGCTAGAGACTCAAAAACCTCCCT
TGATTTGCCAAGAGAATCCGACGGGGGCATGCACGCGCATGTGTTGTGCG
TCTGTTCGGGGTCGGGCTGACAGTGCGAGGGTGCGTGAGGTTCGACGTGC
AGGGGATGACCGACACACCACAGCCGTCGTCGAAGCAGATGCAGAGTCAC
GTTGTAGAGAAACGAGCGAAGCTGCCGCGGATGTTGAGACCGTAGCCGGC
GGTGTGCTCCTTCGGTGCCCTTGTCCGTCCCCGTCTCTCTCCTCATCTTT
CTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTGTCTGTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCCTTCTGGTTCGGATTACTGTGTACCTCTGAAGACATGCGGTGG
CCCTTGGCAATTTTGTTCATCACAAGATCGTGCGCATTTCCCATCAACAG
CGGAACGGTTCGAACGGCCACTGCAATGTTGTTCCGCACAAGGAGAAGTC
TGAGCGCAACGCCGCAAGTACCGCTCGAGTTGTTGGCGGTAGAAGTGAGA
ATGGACAATACCCACTGCACGAGAAAAACGCTCGGGCCATAGAAATACTC
AAACAGCATCATCTCCTTCCTGCGATCCATTTTTCACTAGATCAGGTGTC
AACAATTACGAGAAGCGCTCCTAGACTTGTTATTCGTCAGCCTTGTCTAG
TTTTTTTCCAGCTCGCGTATTTTGTCGTGTGTTGGGGCGTATGAACGTTT
AGATTCTTTGGCGTGTGTCTCCCCCACGAGGACTTCTCTAATTCTCTCGT
ACACGGCTCATCTCCTTGAGAATCTTCCCCCCAATGCTCTCGGCTCCGTT
TTTTTTTTTTTTGAAGCAGAGCCCCGTCTGGGCAAAACCGAGATTTCTGA
CGCACCTCATGGGCCCGCTGATAGCGGCTACCGTCGTCGGATCCACCTTC
GCCAAGATTGAGAGGCTCAACCTCTTCAGCCTGTGAGTGCCTCTCGGCTC
TACGAGCTGCGATGTTGTGGTCCTTCATTTCTTGTGCGGGTGCTTCGAGG
CTACTTGCCTGCCTACCTGACCCGGTCCTCGTTTTTCGCATGTGGGAAGA
GCTCGCGCATTTGATTGAATGCCCCGCGTCTTCGTTGGTTTGCCCTTTTC
GCGGCTGCGGCCAGCACGGGCGGGAGGAAGTTGACTGCAGCCTCGAAGTA
CCGCTTGCACACGTCCGCTGCCCCGCCTGCGCGTTCGCGCGCCCGTCTCG
ATTGACCTCAGCTCGCGTGATCGGCTCGGCTCGTGTCGTCTTTGCTGTCG
GTTTACTTGACTGATTGCCTGCCTGCCTGCCTGCCTGCCTGCCGGCCGGC
CGGCCGATCGGCCTGTCTTTTCTTCCGTCTATTTGCCTTATCTATCACTG
CCGGCCAAGACATGCGACGTGCATGTCCCTGGCTTTCGTGGTCTTCATGC
CGGAGGGGGTGGTGGCGTACAGGAATCACCTGCTGCTAGACTCTCTCAGC
CCGATCATGTCGAACGGAATCAAGGCCAAGAAGAGAACAATTCACCTCAC
GCTTCAGGTACGCTGAGGAAGCGTGTAGAAGCTGAAATCAAACCATTTAA
CTAGTCAGCGCTAAGTAGTCAAATGGTTTGATTTCAGCTTCGTTAAAGTA
CGACGTGAGTTCAAGACCCGAACTTTATGTCTTTTTCCCTGAGACCGTGA
ATATTGTAGTAGAAGCTGAAATGAAACCATTAGACTAGTCAGCACTACCA
AATGGTTTGATTTCAGCTTCTGCAGTAGCCAAGAGATCGCCCTCAGGAAA
TCCGCGAACAGGGCGCATAAAAGGACGGGCTTGGGTTTGAGTAGAGGGTG
CGATCACACCGAAGGAATCTTGCTTCGGTGTTGAGAAGATTTTCCCCGTA
GCTCATGGAGGTAAGACTGGAGCTTCTTTCGCGGAGAATACTGGAGGCGT
GTTTGGAGCGCGTCTGATATCTTGCTACAATTGGAGACTGGACGAGGAAT
GCCGACATTCAGTCCTTTTGTATGTCGACTAATGAGAGCCCTGAGTGAGG
TATATTCATTTCACCTTAAATCCAAAGTCTCCGGAGACCATTATCGGACA
TGGGGTCATTCACTTGGAGGGAATCGTGGGGGACGGAGAGGGGGGGGGAA
AGGCTGACGCGGCAGTGCATCATGATGGTGAACGGGGCTACCTGCGGGGC
TCCGCGCCTCAAATGAAACATTGAAGGCTTGACGCAAATGACAGGCCGGT
GGCTTTGGAGCGCCCCCTAGAGCCGTTGCCGGCTCGTAACCAGGAGGGAA
ATGTATGGGAAAAAACTTCTCCGAACAAGTTGAGTTGCGTATCGATACGC
AAGGGCGACGAAATCGTTTTTACGATGGTTTACTCTATCCCAGATAACCC
ATCCCGACCACAGACAGCTGCAAGCCTGCTGGAGTGAGGGTTGAGAGGCG
CCCAACTGTGATCAGGAGGGGGGATAGCTTTCGCGGCAGATGGTCGCTCT
GGTGGCTCTGCTCGGGTCTGCCCTACGGCGGCAAAGGGGGAGCTACTCCA
GCCTCCCTCTCCTTCTTCCCCCCACCTCTCGCCCGCTTACGCTATCAATT
TGGCGGGAGGATGGAGCAAGCTGGCGAGCGATCTATTTGTCACATGAAAC
CCAGCAAGCTGTTCCTTTAACCGTTGCCTTTGCCTGTGTCTTGCCTGTAC
CTCGTCGTTTAAGGTTACGCGTCGTCCACCGCCCAAGGTCCTGCCTGCTG
TTTACTCTCTCGCCATGAACCGCAGCGCATCCGGGTCCTCCCAACTTCAG
TCGATGACTCTTCACCGCCCTCACGCTCCACCACACCCAGAAGAGACCGG
TTCATCTCACCCTCCTATCAGTGTTCACCTCTGGTTATCTGGCTGTTCGC
CTGCGCATGTGTGTTTTTCATTTTTACTGCAAGCGCATCAACTTTTCTCT
TTTTCCTTCCACCACGGTCCAGGTCCTGGCCTCCATGTTTGCCGGATTGG
GCCTTTTCTTCATCGCCGGGAACAAGGTGTACAAGAGGAACAACATCTTG
CCGCAAACGGTGCACGGTGTGCTCGGCACCATCGTAAGTCAACGAGCTTC
GCTCTCGCTGTCTCTCTGTCTCTCTGTCTCTCTGTCTCTCTCTCTCTCGT
TCTCTCTCTCGTTCTCTCTCTCTCGCTCTCTCTGCCTGTCTGCCTCTCTC
TGAGCGCTACCTCCATCAATAGCGGAGGCATTCGATATAGGTTCGGGAAA
ATGTCTAGCCATACCATTCGTGTTAACAACAGCAGGCATTGGCTAGATTT
GTACCGGATGTTGGAACCGAATGAGCTTGCGTCTGATGTGCAACGAACAA
GCGAAGCTGCTTTTCGAATTTCAGCCACCTTTTCGAATTGAGTTCAACCC
GATTTCTTATTTAAAAAGACTTCAGCAGTGCTTGACGGAAGCGGATCCGG
CTCGACGTTTTGCCGGAGGTCCCGGCTCCTCTAATTCCAAGCCGTATTAC
TCTCGTGAATCGATTACATAGCTCCCAGCTTCTTGTTTCCAAGTGTCACC
GGGTTCAAGAGGATCGGTCTGTGCCGTCCTCTCGATCGAAGACCTACCAC
ATCCGAGAATCAATCCTTGGTGCTTCTCTAGTATCCGTACGCCACCGGTG
CTGGTAATGCTGCTCTGATACGCTGGCGATGCTGGCACTTGCGCTGCTGT
TAGTCCCTCTCCTGTGATTCGAATTCCGGCGCTCATCGAAATCCTCTACC
GCCGGCTGGCTCCCTTGCCGCATCGCTGCTTCGCATTCTGCGATGCTGTG
CCCCAGTCCTATCCCTATCCTCCCCCCCTCCCCCATCCTCACAACGATGA
CCCCGACCCCCCTCCCCTCCTCCTCCAGACACTCCTGGCGATGGTGATGC
AAGTGGTCGTTGGTCGGTTGAAGTACGCGAGCTTCACGAGCGGCGTGGTG
GATGCGAGAAACAGGGGCAAGAGATACCGCTGGCATGGGAAGGTAGGTAG
ACAAGGACACAAACGTGGTGTTATTCCTTTTTTCCAAACGTGCGCACACC
CATCCCCCGACCGACCGACCGGCCGGCCTGTTTGTTTTCGTCTTCCGTGG
AATCTCGTTCTTAGGCACACGGCAACGGCCTTCTTTTCTTTCGTGTTTCT
TTAGAACTTGCGGCTGCTGCTCAACGCCTCCACCCCTCCGCCAGATGGGT
CTCCTGCTGTACGACTTGTCGACCGTGTCGTTCGTGCTCGGCGTGTGGGC
GTTCTTCGGGGCGTCGGTGGTGGCGGTTCTCGTGCCACTGATGGTTGCGT
ACGCATGGCTCAACGTCAACTTGCAGGTATTTGTGTGTCCCTGCTTTTGT
TGGTTATGGGCACCACGGCGGTGGCGGCGCTGCTGCCTTCGCACGGTTGC
GAAAAGAGTTTCGGCTGCATTGGTTGTGCCTGTTGACGATGTGGTGGTTG
GTTGGGCTGCTGGTTCCGTTGTGGAGGCATTTACTTCGCATCAGCGCGGC
GACCGGACACGCCGGGAATAGGGGAAGGGCGTACGCCCCGCCGCCCGCCA
GCGCTTCCGCTCCAAGCGCGCCGACCGAACGCAACCTTCACATGGAAATC
CGATCACATATGTCCGGTGCAGACCCAGCACAAGTGCCAATAGGGTACCT
CCGCGGGCGCCGACACCACTCCACCCCCTCTCTCCCCTCAACCTGCCATC
CGTCCCCCCCATGCCCCCCCTTCGCCGCCGTGCCATCCGTCCGCCAGATG
CACGAAACGAAACACATCACGGTCCCGGTTTACAGCGAGGAGGCGGACGC
CCAGGCCGGGGAGAGTTTAGTGACCCCGGAGACGAAGCAATTGACCGAAG
AGGGGGTGCCTGAGTCGAAGGGGGAGAGGGAATATCCCTTGTAGTAGGAA
ACGATTTGATTAGCTCACAAAACCTGGTGCTCGACCTGGCTGCCTTCGTG
GGCCTGCAGGTGGACGGGACGGGGGCGTCTGCCGGTCGCAGGAGGGAGAT
AGAGTTGTGCGCACACGGCACGACTGGCTGGCTGCCGGTCTCGCTCTGCA
TCTCCCTGCCCGCCCGGGCGTGAGCGCCGTTTGTTGTCTGTGGGTTGGGG
ATTGCGTCTTGCGTCTTGTTGTCACCCTGGTTTGTTTCGTCGTGTCGTTC
GAGGCGTGTATTAAATCGTGTTTCTAGATGAATGCTGTGCCGGAGCATTG
CCGAGCGATCTTGTCATCATCGTGCGTGCAGATTATCAAAGCAGGAGCAG
GAGCAGGATAGGCGCAGAAGCGCACGCATGCGCACGGTGCGGCCTTCCTT
CGCCTAGGAATTGTTTCCATGTTGTTGTAGCAGCAGAGGCAACTACAGCA
CATCGAGAACAGCAGCAGAGAGCAAAGCATGCAACGGCACGAGAGCTTAT
GTGCCTTCCGCTTCCCAGTTCGCATGGAACGACAACGTCCATTCTCGGAA
AAGACTTCATTCTAGATAAGGTAGAATGTGGTCCCGCAAAGTTCCCAGAG
GGTGGCCGAGCCCGACAAGCAAGTTCCTGCTTCTGTAGGGCTTGAAGGAA
AGCCTGGGATTTTCCGCTGAACGAAAACGTCTTGGATGTGTAGAATCGCA
CAAATCGCGGAGAAGTTGTAAACCAGAGAGGAGCGATGGGAGAAAAGTTT
TGTTGCTTGTGATTGCCTCCCGATTTATTATTTCGAGGTCAACGTCAATC
TTGTACAACG
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Coding sequence (CDS) from alignment at P-fluviatile_contig19:1499494..1506203+

>mRNA_P-fluviatile_contig19.3546.1 ID=mRNA_P-fluviatile_contig19.3546.1|Name=mRNA_P-fluviatile_contig19.3546.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1692bp|location=Sequence derived from alignment at P-fluviatile_contig19:1499494..1506203+ (Porterinema fluviatile SAG_2381)
ATGGAGGCCCTATTGCAGAAACTGAAGGTGGTTCTGGACAAGATTACCAC
CGCAAGGGCGCGCTTGGTGACGGCTTCCAAGATGGAGGCCCTATTGCAGA
AACTGAAGGTGGTTCTGGACAAGATTACCACCGCAAGGGCGCGCTTGGTG
ACGGCTTCCAAGAGCCCCGTCTGGGCAAAACCGAGATTTCTGACGCACCT
CATGGGCCCGCTGATAGCGGCTACCGTCGTCGGATCCACCTTCGCCAAGA
TTGAGAGGCTCAACCTCTTCAGCCTAGCCCCGTCTGGGCAAAACCGAGAT
TTCTGACGCACCTCATGGGCCCGCTGATAGCGGCTACCGTCGTCGGATCC
ACCTTCGCCAAGATTGAGAGGCTCAACCTCTTCAGCCTACATGCGACGTG
CATGTCCCTGGCTTTCGTGGTCTTCATGCCGGAGGGGGTGGTGGCGTACA
GGAATCACCTGCTGCTAGACTCTCTCAGCCCGATCATGTCGAACGGAATC
AAGGCCAAGAAGAGAACAATTCACCTCACGCTTCAGACATGCGACGTGCA
TGTCCCTGGCTTTCGTGGTCTTCATGCCGGAGGGGGTGGTGGCGTACAGG
AATCACCTGCTGCTAGACTCTCTCAGCCCGATCATGTCGAACGGAATCAA
GGCCAAGAAGAGAACAATTCACCTCACGCTTCAGGTCCTGGCCTCCATGT
TTGCCGGATTGGGCCTTTTCTTCATCGCCGGGAACAAGGTGTACAAGAGG
AACAACATCTTGCCGCAAACGGTGCACGGTGTGCTCGGCACCATCGTCCT
GGCCTCCATGTTTGCCGGATTGGGCCTTTTCTTCATCGCCGGGAACAAGG
TGTACAAGAGGAACAACATCTTGCCGCAAACGGTGCACGGTGTGCTCGGC
ACCATCACACTCCTGGCGATGGTGATGCAAGTGGTCGTTGGTCGGTTGAA
GTACGCGAGCTTCACGAGCGGCGTGGTGGATGCGAGAAACAGGGGCAAGA
GATACCGCTGGCATGGGAAGACACTCCTGGCGATGGTGATGCAAGTGGTC
GTTGGTCGGTTGAAGTACGCGAGCTTCACGAGCGGCGTGGTGGATGCGAG
AAACAGGGGCAAGAGATACCGCTGGCATGGGAAGATGGGTCTCCTGCTGT
ACGACTTGTCGACCGTGTCGTTCGTGCTCGGCGTGTGGGCGTTCTTCGGG
GCGTCGGTGGTGGCGGTTCTCGTGCCACTGATGGTTGCGTACGCATGGCT
CAACGTCAACTTGCAGATGGGTCTCCTGCTGTACGACTTGTCGACCGTGT
CGTTCGTGCTCGGCGTGTGGGCGTTCTTCGGGGCGTCGGTGGTGGCGGTT
CTCGTGCCACTGATGGTTGCGTACGCATGGCTCAACGTCAACTTGCAGAT
GCACGAAACGAAACACATCACGGTCCCGGTTTACAGCGAGGAGGCGGACG
CCCAGGCCGGGGAGAGTTTAGTGACCCCGGAGACGAAGCAATTGACCGAA
GAGGGGGTGCCTGAGTCGAAGGGGGAGAGGGAATATCCCTTGTAGATGCA
CGAAACGAAACACATCACGGTCCCGGTTTACAGCGAGGAGGCGGACGCCC
AGGCCGGGGAGAGTTTAGTGACCCCGGAGACGAAGCAATTGACCGAAGAG
GGGGTGCCTGAGTCGAAGGGGGAGAGGGAATATCCCTTGTAG
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