mRNA_P-fluviatile_contig19.3530.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig19.3530.1 vs. uniprot
Match: D7FZT6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZT6_ECTSI) HSP 1 Score: 390 bits (1001), Expect = 1.290e-112 Identity = 422/729 (57.89%), Postives = 441/729 (60.49%), Query Frame = 1
Query: 97 MSHRSRQSNGGGHSKVNPDVAKYRGACPASRSDSELLDLVKRMGGDEAKIQSALEDWWQNDQGEWATATXXXXXXXXXXXXXXXXXXX--YGNGRSMDDRRGGRGGMSDKMRGLRLDGDRGSYHNDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWNGNRSSSIPPQAGSDPTESGAGWGTTAAVAQPTVAGSAWTGDSPSAAVGEAVGTAETSPPGAXXXXXXXXXXXXXXVGGSAPTSASGPSLASAAVGARXXXXXXXXXXXXXXXXXXX-----APMADNGWSSSAQDPVAPGSMGGXXXSLGGGAAVTPAAKEED----------AAAWAQSNLPATSAWSRGAATIINPKPKPVPAPVAAPXXXXXXXXXXXXXQPVASAIXXXXXXXXXXXXXGEAVAATPPQTPRPAVVEAXXXXXXXXXXXXXXSSPSPVARPPAATVAASTTS--------------------------------VQPVQPTGDSXXXXXXXXXXXXXXXAAAPGSQLHLQKAQQXXXXXXXXXXXXXXXXXXXXXXSTSASVPGEGLKMGKWGLSDTIANEESFLTFGQLSFGVPDVGGPENQTXXXXXXXXXXXXXGWGSTTSTIGAGWGTKDTATSPVETQGTKPPGFNSAVTASPSQAVPVGTGPPPGLPPLSNVKQVHELEAEMDSLTKPHSQFSQAPKAQSKLSAAQQ 2136
MS R +NGGG K N DVAKYR ACPASRSDSE+++LVK+MGGD+AKIQSALEDWWQNDQGEWATATXXXXXXXXXXXXXXXXXXX Y NGR MDDRRGGRGGM+DKMRGLRLDGDRG Y GGXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G A A+ AGSAWTGD P AAV EA XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX APMA NGWSSSAQDPVAPG +G SLGG AAAWAQSNLPATSAWSRGAATIINPKPKPVP XXXXXXXXXXXXX A GEAVAATPPQTPRP S PS VA AA A+ A APGSQLHLQKAQ +T AS PGEGLKMGKWGLSDTIAN+ESFL+FGQLSFGVPDVGGPE+Q+ GWG+T+ + GWGTKDTATSPVET GTKPPGF+S VTASPS VPVG GPPPGLPPL NVKQVHELEAEMDSL KPHSQFSQ KAQSKL AAQQ
Sbjct: 1 MSRSQRHANGGG--KGNADVAKYRDACPASRSDSEIVELVKKMGGDQAKIQSALEDWWQNDQGEWATATXXXXXXXXXXXXXXXXXXXXXYANGRGMDDRRGGRGGMADKMRGLRLDGDRGGYR--GGXXXXXXXXXXSAPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-----ASAKAPAAGSAWTGDGP-AAVSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPMAHNGWSSSAQDPVAPGPVGSGSGSLGGXXXXXXXXXXXXXXXXXXXXXXAAAWAQSNLPATSAWSRGAATIINPKPKPVPVXXXVAXXXXXXXXXXXXXXXXXXAAHPTLPVVASPG--GEAVAATPPQTPRPQ-----------------GSMPS-VAETAAAAAASPAIGSXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAAPSPVTAAVVTPATAPGSQLHLQKAQAQEASAVSKPTA-----------ATGASAPGEGLKMGKWGLSDTIANDESFLSFGQLSFGVPDVGGPESQSQQTSTSVGTSAGNGWGATSGSA-MGWGTKDTATSPVETPGTKPPGFSSTVTASPS--VPVGAGPPPGLPPLGNVKQVHELEAEMDSLNKPHSQFSQVSKAQSKLPAAQQ 685 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig19.3530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig19.3530.1 >prot_P-fluviatile_contig19.3530.1 ID=prot_P-fluviatile_contig19.3530.1|Name=mRNA_P-fluviatile_contig19.3530.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1187bp MSHRSRQSNGGGHSKVNPDVAKYRGACPASRSDSELLDLVKRMGGDEAKIback to top mRNA from alignment at P-fluviatile_contig19:1356621..1370219- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig19.3530.1 ID=mRNA_P-fluviatile_contig19.3530.1|Name=mRNA_P-fluviatile_contig19.3530.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=13599bp|location=Sequence derived from alignment at P-fluviatile_contig19:1356621..1370219- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig19:1356621..1370219- >mRNA_P-fluviatile_contig19.3530.1 ID=mRNA_P-fluviatile_contig19.3530.1|Name=mRNA_P-fluviatile_contig19.3530.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=7122bp|location=Sequence derived from alignment at P-fluviatile_contig19:1356621..1370219- (Porterinema fluviatile SAG_2381)back to top |