mRNA_P-fluviatile_contig19.3498.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig19.3498.1 vs. uniprot
Match: D7FZR3_ECTSI (Pentapeptide repeat n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR3_ECTSI) HSP 1 Score: 140 bits (352), Expect = 3.410e-34 Identity = 104/125 (83.20%), Postives = 111/125 (88.80%), Query Frame = 3
Query: 270 LFQGKYKSKDFSGAIAKEVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIMTNAIATGSYFTSNLSNVGDISGADFTDALIRKDVAKLLCARPDAKGTNPTTGADTRDSLLCDMF 644
L +GKYKSKDFSG+IA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TIMTNA+ATGSYF +N++NVGDISGADFTDALIRKDVAK+LCARPDAKGTNPTTG DTRDSLLCDMF
Sbjct: 114 LSKGKYKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLCDMF 238
BLAST of mRNA_P-fluviatile_contig19.3498.1 vs. uniprot
Match: A0A6H5KFC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFC5_9PHAE) HSP 1 Score: 130 bits (326), Expect = 2.760e-31 Identity = 60/67 (89.55%), Postives = 65/67 (97.01%), Query Frame = 3
Query: 444 TIMTNAIATGSYFTSNLSNVGDISGADFTDALIRKDVAKLLCARPDAKGTNPTTGADTRDSLLCDMF 644
TIMTNA+ATGSYF +N++NVGDISGADFTDALIRKDVAK+LCARPDAKGTNPTTG DTRDSLLCDMF
Sbjct: 115 TIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLCDMF 181
BLAST of mRNA_P-fluviatile_contig19.3498.1 vs. uniprot
Match: A0A1E7ER21_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ER21_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 5.660e-15 Identity = 42/117 (35.90%), Postives = 54/117 (46.15%), Query Frame = 3
Query: 285 YKSKDFSGAIAKEVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIMTNAIATGSYFTSNLSNVGDISGADFTDALIRKDVAKLLCARPDAKGTNPTTGADTRDSLLC 635
YK KDF+ +A++ N ++TNAIA+G+YF NL + DFTDA I + +LC RPD KGTNPTTG DTRDS +C
Sbjct: 11 YKLKDFTQVLARKTNFQKSIFTGCRFQNAYLIDADFGSADLRGVSFERTNMENVVLTNAIASGAYFDQNLLEAKSVENVDFTDAQIPDKILPVLCERPDMKGTNPTTGVDTRDSAMC 127
BLAST of mRNA_P-fluviatile_contig19.3498.1 vs. uniprot
Match: K0TQX1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQX1_THAOC) HSP 1 Score: 79.0 bits (193), Expect = 6.430e-13 Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 3
Query: 450 MTNAIATGSYFTSNLSNVGDISGADFTDALIRKDVAKLLCARPDAKGTNPTTGADTRDSLLC 635
+ N +A+GSYF +L +V + G DFTDA I KL+C R D KGTNPTTGADTRDSL+C
Sbjct: 162 LRNIVASGSYFGQSLLDVESLEGGDFTDAQIPPKTLKLVCDREDVKGTNPTTGADTRDSLMC 223
BLAST of mRNA_P-fluviatile_contig19.3498.1 vs. uniprot
Match: A0A7S2SQY3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY3_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 4.250e-11 Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 3
Query: 483 TSNLSNVGDISGADFTDALIRKDVAKLLCARPDAKGTNPTTGADTRDSLLC 635
+S L G+I GADFTD+++R+ + K LC RPDAKGTNP TG DTRDSL C
Sbjct: 187 SSTLDQAGNIEGADFTDSIMRETMQKKLCERPDAKGTNPKTGVDTRDSLFC 237
BLAST of mRNA_P-fluviatile_contig19.3498.1 vs. uniprot
Match: B8LCL5_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LCL5_THAPS) HSP 1 Score: 74.3 bits (181), Expect = 5.900e-10 Identity = 38/69 (55.07%), Postives = 44/69 (63.77%), Query Frame = 3
Query: 444 TIMTNA-----IATGSYFTSNLSNVGDISGADFTDALIRKDVAKLLCARPDAKGTNPTTGADTRDSLLC 635
T M NA +A GSYF +L +V + DFTDA I KL+C R D KGTNPTTGADTRDSL+C
Sbjct: 2475 TSMDNANLKDIVAVGSYFGQSLVDVKTLENGDFTDATIPPKTLKLVCDREDVKGTNPTTGADTRDSLMC 2543
BLAST of mRNA_P-fluviatile_contig19.3498.1 vs. uniprot
Match: L1IGW1_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IGW1_GUITC) HSP 1 Score: 70.1 bits (170), Expect = 7.590e-10 Identity = 34/54 (62.96%), Postives = 37/54 (68.52%), Query Frame = 3
Query: 474 SYFTSNLSNVGDISGADFTDALIRKDVAKLLCARPDAKGTNPTTGADTRDSLLC 635
SY L V DISGADFTDAL+R D+ LC R DA GTNP T ADTR+SL C
Sbjct: 177 SYTNLGLDKVKDISGADFTDALVRPDILAKLCKRSDATGTNPVTKADTRESLGC 230
BLAST of mRNA_P-fluviatile_contig19.3498.1 vs. uniprot
Match: A0A7S4HSJ0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HSJ0_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 8.410e-10 Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 3
Query: 450 MTNAIATGSYFTSN--LSNVGDISGADFTDALIRKDVAKLLCARPDAKGTNPTTGADTRDSLLC 635
+ NA+ Y + L+ V DI G+D+TD ++R+D K LC+ P AKGTNPTTG DTR+SL+C
Sbjct: 191 LKNAVLREMYVSGATILTGVKDIEGSDWTDTMLRRDQTKYLCSHPTAKGTNPTTGVDTRESLMC 254
BLAST of mRNA_P-fluviatile_contig19.3498.1 vs. uniprot
Match: A0A7S2GAY7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GAY7_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 9.130e-10 Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 3
Query: 477 YFTSNLSNVGDISGADFTDALIRKDVAKLLCARPDAKGTNPTTGADTRDSLLC 635
+ S L V I GADFTDA++ + K +CA P AKGTNPTTG DTRDSL+C
Sbjct: 169 FSASTLDEVASIEGADFTDAVMNTPLMKKMCALPTAKGTNPTTGVDTRDSLIC 221
BLAST of mRNA_P-fluviatile_contig19.3498.1 vs. uniprot
Match: A0A8J9XA72_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9XA72_PHATR) HSP 1 Score: 65.9 bits (159), Expect = 1.630e-9 Identity = 28/63 (44.44%), Postives = 41/63 (65.08%), Query Frame = 3
Query: 447 IMTNAIATGSYFTSNLSNVGDISGADFTDALIRKDVAKLLCARPDAKGTNPTTGADTRDSLLC 635
++ + +A G+YF++++ + + ADFTDA LLC R DA GTNP TG DTR+SL+C
Sbjct: 46 LLKDTVAVGAYFSASIMDTLTVENADFTDAQFPIKTLPLLCERSDATGTNPVTGVDTRESLMC 108 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig19.3498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig19.3498.1 >prot_P-fluviatile_contig19.3498.1 ID=prot_P-fluviatile_contig19.3498.1|Name=mRNA_P-fluviatile_contig19.3498.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=83bp MSARIIPDLRSTVASWTLAAVLLVGLPLLSAPSPAAAISGGGLDYAELNLback to top mRNA from alignment at P-fluviatile_contig19:1120520..1124244+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig19.3498.1 ID=mRNA_P-fluviatile_contig19.3498.1|Name=mRNA_P-fluviatile_contig19.3498.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3725bp|location=Sequence derived from alignment at P-fluviatile_contig19:1120520..1124244+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig19:1120520..1124244+ >mRNA_P-fluviatile_contig19.3498.1 ID=mRNA_P-fluviatile_contig19.3498.1|Name=mRNA_P-fluviatile_contig19.3498.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=498bp|location=Sequence derived from alignment at P-fluviatile_contig19:1120520..1124244+ (Porterinema fluviatile SAG_2381)back to top |