mRNA_P-fluviatile_contig19.3490.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig19.3490.1
Unique NamemRNA_P-fluviatile_contig19.3490.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig19.3490.1 vs. uniprot
Match: D7G4S4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4S4_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 6.470e-47
Identity = 110/238 (46.22%), Postives = 141/238 (59.24%), Query Frame = 1 
Query:  178 LRRVDRGGTTCAAPKK-YIPDGVSPEEWEKIKAKEEAAKKRGNLGRIGVQGFKSRSMQAWQEAGASHLFPVDPQKVKTGEIPQEKTPYMQRGGAWDDSDL----------AKKNVV---SQSGKKITKKPWSKKDKEYAEGGYKRELSASLFPADPMRWTPG---KPSGGPANNKQSIEAQKKVDARPHTKASVPPQKSRLEEGAATTKQNDAKLNKQLKSDKNRSGKDGEGGGFGLW 840
            LR V    ++ AA K  YIPDG+SP EW+KIK  ++  KK+ NLG++G   FKSRS QAWQE+GA HLFPVDP+KVK+GEIP +K PYMQRGGAWD+SDL          A+K+ V   ++  K + +K WS  DK YA GGYK+E S S+F   P+ W  G   K  G   +NK+ I  QKKV             K R+E+ AA  ++   KL KQL  +K         G FG+W
Sbjct:   28 LRPVTTRSSSSAALKMVYIPDGLSPAEWKKIKDADK--KKQENLGKLGPSRFKSRSFQAWQESGAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLTSKKGQAAMRARKDKVVLNNKVSKGVKQKAWSSTDKAYAAGGYKKEQSVSIFGGTPLPWVSGAAQKSPGVEVDNKRRINEQKKVKRAATNAPMSAAVKRRVEKEAAEERRKQEKLKKQLNGEKK--------GLFGMW 255
[Close]
BLAST of mRNA_P-fluviatile_contig19.3490.1 vs. uniprot
Match: A0A7S2US33_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US33_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.140e-38
Identity = 73/132 (55.30%), Postives = 95/132 (71.97%), Query Frame = 1 
Query:  226 YIPDGVSPEEWEKIKAKEEAAKKRGNLGRIGVQGFKSRSMQAWQEAGASHLFPVDPQKVKTGEIPQEKTPYMQRGGAWDDSDLAKKNVVSQSGKKITKKPWSKKDKEYAEGGYKRELSASLFPADPMRWTPG 621
            Y+P+G++PE+W+KI+ K++A   +GNLG +G + FKSRS  AWQ AG  HLFPVDP+KVKTGEI  +  PYMQRGGAWD+SDL KK      G+K  K  WS +DK+YA GG+++E S S+F    M WT G
Sbjct:   42 YVPEGLTPEQWKKIQEKDKA---KGNLGEMGPKRFKSRSFAAWQAAGGKHLFPVDPKKVKTGEIAMKDVPYMQRGGAWDNSDLIKK------GEKAPKVEWSDRDKQYAAGGFRKEQSVSIFGGVSMPWTQG 164
[Close]
BLAST of mRNA_P-fluviatile_contig19.3490.1 vs. uniprot
Match: D7FWZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWZ5_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 2.520e-36
Identity = 73/112 (65.18%), Postives = 90/112 (80.36%), Query Frame = 1 
Query:  223 KYIPDGVSPEEWEKIKAKEEAAKKR--GNLGRIGVQGFKSRSMQAWQEAGASHLFPVDPQKVKTGEIPQEKTPYMQRGGAWDDSDLAKKNVVSQSGKKITKKPWSKKDKEYA 552
            KY+PDG+SPE+W+K++ KEEA KK+  G+LG++GV+ FKSRS+QAWQE GA HLFPVDP+KVK+GEIP EKTPYMQR GAWD+SDLAKKN+         +K WS  DK YA
Sbjct:   66 KYVPDGLSPEQWKKMQ-KEEAEKKKKMGDLGQVGVKSFKSRSLQAWQEDGAGHLFPVDPKKVKSGEIPPEKTPYMQRKGAWDNSDLAKKNL---------QKKWSATDKAYA 167
[Close]
BLAST of mRNA_P-fluviatile_contig19.3490.1 vs. uniprot
Match: A0A836CGF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGF0_9STRA)

HSP 1 Score: 135 bits (340), Expect = 2.520e-32
Identity = 77/156 (49.36%), Postives = 93/156 (59.62%), Query Frame = 1 
Query:  226 YIPDGVSPEEWEKIKAKEEAAKKRGNLGRIGVQGFKSRSMQAWQEA----GASHLFPVDPQKVKTGEIPQEKTPYMQRGGAWDDSDLAKKNVVSQSGKKITKKPWSKKDKEYAEGGYKRELSASLFPADPMRWTPGKPSGGPANNKQSIEAQKKVD 681
            YIPDG++PE+W+ IK KE+  K   NLGR+G   FKSRS QAWQEA       HLFPVDP KVK GEIP  K PYMQRGG+WDD DL KK       K I KK WS  DK YA GG +   S ++F         G+ +  P N + + +  K +D
Sbjct:   42 YIPDGLTPEQWKVIKEKEQE-KASKNLGRVGATSFKSRSFQAWQEAMERGEGGHLFPVDPVKVKRGEIPLSKVPYMQRGGSWDDEDLVKKE------KGIKKKEWSPLDKAYATGGERANQSINIF---------GRGANLPWNGRAAFKDPKAID 181
[Close]
BLAST of mRNA_P-fluviatile_contig19.3490.1 vs. uniprot
Match: A0A835ZE56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE56_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.680e-31
Identity = 69/134 (51.49%), Postives = 87/134 (64.93%), Query Frame = 1 
Query:  202 TTCAAPKKYIPDGVSPEEWEKIKAKEEAAKKRGNLGRIGVQGFKSRSMQAWQEA----GASHLFPVDPQKVKTGEIPQEKTPYMQRGGAWDDSDLAKKNVVSQSGKKITKKPWSKKDKEYAEGGYKRELSASLF 591
            +TC    +YIPDG++  +W+ IK KE+A K   NLGR+G   FKSRS QAWQ+A       HLFPVDP+KVKTGEI   + PYMQR G+WDD DL KK       K I KK W+  DK YA+GG + + S ++F
Sbjct:   36 STCQVTMRYIPDGLTQAQWDAIKEKEQA-KASKNLGRVGATSFKSRSFQAWQQAMENGEGGHLFPVDPRKVKTGEIKLSEVPYMQRRGSWDDEDLLKKE------KGIQKKAWTPTDKAYADGGERAQQSVNIF 162
[Close]
BLAST of mRNA_P-fluviatile_contig19.3490.1 vs. uniprot
Match: A0A6S9GSP2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GSP2_HETAK)

HSP 1 Score: 125 bits (314), Expect = 6.170e-29
Identity = 69/133 (51.88%), Postives = 89/133 (66.92%), Query Frame = 1 
Query:  220 KKYIPDGVSPEEWEKIKAKEEAAKKRGNLGRIGVQGFKSRSMQAWQEAGASHLFPVDPQKVKTGEIPQEKTPYMQRGGAWDDSDL-AKKNVVSQSGKKITKKPWSKKDKEYAEGGYKRELSASLFPADPMRWT 615
            K Y+PDG+S E++ KIK KEEA K + NLG++G   FKSRS   W  AG  HLFPVDP+KVK+GEI  E  PYMQR GAWD+SDL   KNV  ++   + K   +K + EY +GG+++E S S+F    M WT
Sbjct:   40 KGYVPDGLSAEQYAKIK-KEEAEKLK-NLGKVGPNRFKSRSFADWHAAGGKHLFPVDPRKVKSGEIAIEDVPYMQRKGAWDNSDLKGNKNVRDKNKLNVQK---TKSEVEYEKGGFRKEQSVSIFGGRNMPWT 167
[Close]
BLAST of mRNA_P-fluviatile_contig19.3490.1 vs. uniprot
Match: A0A7S2SHZ4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHZ4_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.870e-26
Identity = 65/134 (48.51%), Postives = 83/134 (61.94%), Query Frame = 1 
Query:  226 YIPDGVSPEEWEKIKAKEEAAKKRGNLGRIGVQGFKSRSMQAWQEA----GASHLFPVDPQKVKTGEIPQEKTPYMQRGGAWDDSDLAKKNVVSQSGKKITKKPWSKKDKEY--------AEGGYKRELSASLF 591
            Y+PDG+SPE+WEKIK KE AAK    LGR+G +GFKSRSMQ++ EA     A HL PVDP+ VK+G+I  E  PYMQRGG+WD+SD+          K   KK W K D ++        ++GG  +   A LF
Sbjct:   19 YVPDGLSPEQWEKIKKKERAAKT--GLGRVGARGFKSRSMQSFHEALELGEAKHLMPVDPRLVKSGKIKMEDVPYMQRGGSWDNSDV----------KGAKKKRWLKSDMQFEAEQKNGKSQGGNGKNPFAKLF 140
[Close]
BLAST of mRNA_P-fluviatile_contig19.3490.1 vs. uniprot
Match: A0A1Z5KB69_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KB69_FISSO)

HSP 1 Score: 115 bits (287), Expect = 1.870e-25
Identity = 65/148 (43.92%), Postives = 91/148 (61.49%), Query Frame = 1 
Query:  226 YIPDGVSPEEWEKIKAKEEAAKKRGNLGRIGVQGFKSRSMQAWQEA----GASHLFPV--DPQKVKTGEIPQEKTPYMQRGGAWDDSDLAKKNVVSQSGKKITKKPWSKKDKEYAEGGYKRELSASLFP-ADPMRWTPGKPSGGPANN 648
            Y+PDG +PE ++K K +E    ++ NLGR+G +GFKSRS Q++QEA     A+HL PV    ++VK GE+  E  PYMQRGG+WD+SD+       +  KK+    W + DKEYA GGY +E S S+F     + WT  +   GPA +
Sbjct:   38 YVPDGFTPESYKKFKEEERKKNEKKNLGRVGPKGFKSRSFQSFQEALERGEATHLLPVMNAKERVKKGELKWEDIPYMQRGGSWDNSDV-------KGAKKVR---WLQSDKEYANGGYLKEQSVSIFGYGQGLDWTGTRSRSGPAES 175
[Close]
BLAST of mRNA_P-fluviatile_contig19.3490.1 vs. uniprot
Match: A0A7S1D0M1_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0M1_CYCTE)

HSP 1 Score: 113 bits (282), Expect = 8.310e-25
Identity = 64/148 (43.24%), Postives = 89/148 (60.14%), Query Frame = 1 
Query:  226 YIPDGVSPEEWEKIKAKEEAAKKRGNLGRIGVQGFKSRSMQAWQEA----GASHLFPV--DPQKVKTGEIPQEKTPYMQRGGAWDDSDLAKKNVVSQSGKKITKKPWSKKDKEYAEGGYKRELSASLFP-ADPMRWTPGKPSGGPANN 648
            Y+P G +PE+++K K +E+   ++ NLGR+G +GF+SRS Q++QEA     A HL PV    +KV  GEI  E  PYMQRGG+WD+SD+          K   KK W   DK YA+GGYK+E S S+F   + + WT      GP+ +
Sbjct:   60 YVPSGFTPEQYKKFKEEEKKKMQKQNLGRLGPKGFQSRSFQSFQEALERGEAKHLLPVFNAKEKVARGEIRPEDVPYMQRGGSWDNSDV----------KGAKKKRWLSSDKSYADGGYKKEQSVSIFGYGEGLDWTGKNARTGPSES 197
[Close]
BLAST of mRNA_P-fluviatile_contig19.3490.1 vs. uniprot
Match: A0A7S1G0I7_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G0I7_9STRA)

HSP 1 Score: 112 bits (281), Expect = 8.500e-25
Identity = 66/151 (43.71%), Postives = 88/151 (58.28%), Query Frame = 1 
Query:  226 YIPDGVSPEEWEKIKAKEEAAKKRGNLGRIGVQGFKSRSMQAWQEA----GASHLFPV--DPQKVKTGEIPQEKTPYMQRGGAWDDSDLAKKNVVSQSGKKITKKPWSKKDKEYAEGGYKRELSASLFPADP-MRWTPGKPSGGPANNKQS 657
            Y+P G +PE ++K K  E   K++  LG +G +GFKSRSMQ++QEA     A+HL PV    QK+  GEI QE  PYMQRGG WD+SD+         G K+ K  W K DK+Y+ GGY++E S S+      + WT  +   GP   K S
Sbjct:   45 YVPSGFTPESYKKFKEDEAKKKQKTGLGGVGPRGFKSRSMQSFQEAMERGEATHLMPVFNAKQKIARGEIKQEDVPYMQRGGKWDNSDI--------KGAKMKK--WLKSDKDYSTGGYRKEQSVSILGTGKGLDWTGQRDRAGPGKAKSS 185
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig19.3490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4S4_ECTSI6.470e-4746.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2US33_9STRA3.140e-3855.30Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D7FWZ5_ECTSI2.520e-3665.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CGF0_9STRA2.520e-3249.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZE56_9STRA1.680e-3151.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6S9GSP2_HETAK6.170e-2951.88Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SHZ4_9STRA1.870e-2648.51Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Z5KB69_FISSO1.870e-2543.92Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1D0M1_CYCTE8.310e-2543.24Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7S1G0I7_9STRA8.500e-2543.71Hypothetical protein n=3 Tax=Corethron hystrix Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig19contigP-fluviatile_contig19:1037025..1043047 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score183.0
Seed ortholog evalue1.8e-43
Seed eggNOG ortholog2880.D7G4S4
EggNOG OGs2D1KJ@1,2S4WB@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-15_001160.1
Exons3
Model size2136
Cds size768
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig19.3490.1prot_P-fluviatile_contig19.3490.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig19 1038318..1042972 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815797.5469055-UTR-P-fluviatile_contig19:1037024..10383171622815797.5469055-UTR-P-fluviatile_contig19:1037024..1038317Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 1037025..1038317 -
1693563331.674525-UTR-P-fluviatile_contig19:1037024..10383171693563331.674525-UTR-P-fluviatile_contig19:1037024..1038317Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 1037025..1038317 -
1622815797.600576-UTR-P-fluviatile_contig19:1042972..10430471622815797.600576-UTR-P-fluviatile_contig19:1042972..1043047Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 1042973..1043047 -
1693563331.7162046-UTR-P-fluviatile_contig19:1042972..10430471693563331.7162046-UTR-P-fluviatile_contig19:1042972..1043047Porterinema fluviatile SAG_2381UTRP-fluviatile_contig19 1042973..1043047 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815797.5613492-CDS-P-fluviatile_contig19:1038317..10386051622815797.5613492-CDS-P-fluviatile_contig19:1038317..1038605Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1038318..1038605 -
1693563331.685696-CDS-P-fluviatile_contig19:1038317..10386051693563331.685696-CDS-P-fluviatile_contig19:1038317..1038605Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1038318..1038605 -
1622815797.575288-CDS-P-fluviatile_contig19:1040569..10407251622815797.575288-CDS-P-fluviatile_contig19:1040569..1040725Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1040570..1040725 -
1693563331.697503-CDS-P-fluviatile_contig19:1040569..10407251693563331.697503-CDS-P-fluviatile_contig19:1040569..1040725Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1040570..1040725 -
1622815797.5883052-CDS-P-fluviatile_contig19:1042648..10429721622815797.5883052-CDS-P-fluviatile_contig19:1042648..1042972Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1042649..1042972 -
1693563331.70526-CDS-P-fluviatile_contig19:1042648..10429721693563331.70526-CDS-P-fluviatile_contig19:1042648..1042972Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1042649..1042972 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig19.3490.1

>prot_P-fluviatile_contig19.3490.1 ID=prot_P-fluviatile_contig19.3490.1|Name=mRNA_P-fluviatile_contig19.3490.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=256bp
MVATALSVVVALTFLSRPAAAFVSPASSALAGGALRRVDRGGTTCAAPKK
YIPDGVSPEEWEKIKAKEEAAKKRGNLGRIGVQGFKSRSMQAWQEAGASH
LFPVDPQKVKTGEIPQEKTPYMQRGGAWDDSDLAKKNVVSQSGKKITKKP
WSKKDKEYAEGGYKRELSASLFPADPMRWTPGKPSGGPANNKQSIEAQKK
VDARPHTKASVPPQKSRLEEGAATTKQNDAKLNKQLKSDKNRSGKDGEGG
GFGLW*
back to top

mRNA from alignment at P-fluviatile_contig19:1037025..1043047-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig19.3490.1 ID=mRNA_P-fluviatile_contig19.3490.1|Name=mRNA_P-fluviatile_contig19.3490.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6023bp|location=Sequence derived from alignment at P-fluviatile_contig19:1037025..1043047- (Porterinema fluviatile SAG_2381)
CACTCTCATCCCCAAGCAGACACAACCCAGTACACCCGCACTTACAGTTC
TGCTGCACCCTCTTCAACAGCAACCATGGTGGCAACAGCGCTCTCCGTCG
TCGTCGCTCTTACTTTCCTTAGCCGACCTGCTGCGGCCTTCGTTTCCCCA
GCATCCTCCGCGCTGGCGGGCGGCGCACTGCGTCGGGTCGACAGGGGCGG
GACAACGTGTGCCGCTCCGAAGAAGTACATTCCGGACGGTGTGAGCCCAG
AGGAGTGGGAGAAGATCAAGGCCAAAGAAGAAGCGGCCAAGAAGAGGGGA
AACCTCGGGCGCATCGGGGTGCAAGGGTTCAAGAGCAGGAGCATGCAGGC
ATGGCAGGAGGCAGGCGCCAGCCACCTCTTTCCCGTGGACCCTCAGAAGG
TGTGTGCAGTGCACCTGACCCTGTTCATCCCGCATGAACTGTAAAGGAGG
AGGACAGCAGCAGTACGCCCTCCGCACCATGTTTGTGACGTGAAATGGGC
GATCATATTATGTAAACCAGAAGTACAGAGTGCATGAGCCCCCCCCACAA
CGTGTGCGTGGTTCGGTGCACTGCAATGTGGGGACTGTTCGCGTTTTCGT
GCTGAGGTCAGGGGCGTTTTCCGTGCCCTTGAAGCTTGGAGAAACGACAG
GGCGACGTCACCCGAACACCAGGAAGGGCCACGATCGAATGGAACTCATT
GTGCCACAACCAGCCTTGCATTACCGACGCCTCACAAAGGTTGCTATGTG
TTTGTTATCTCAACACCTCATCATCTACCTGAATTGAAGTCGACTCGAAA
AGCATTCACTCCGTATATACAAATAGTCTGGTCACACATTGGGATGCTTT
GAGAAGTTGTTGCTGCTTGGCTGCGCTGCATGAGGCAGAGGACCCCACAA
TACAGAAAAAACAAGATGTGTGGACGCGTTTGATATTTCTGCTGCCTCGC
TGTCATCGTGTCATCATGATCGCCAAAAAAATCAACACAATGTAGTCTAT
ACACGCGAGCAGCCCTGGACCAAATACCGTAATATCGCTCAGACGCCCCC
CGTGCGCACACAAATAACGTGCAACAGGTTGCCTTCGGGTTGTTCTCTAA
GGAAGGTAGGCGACATTTTTCTGAAATAAAAAATATCTGGGGGCGCAAAA
GCCCCCTGGGTGCGTTATTTCCAGCGGTACCGAGGTGATGCTCGTTGTTT
TTACGACAATGGGGAGGATTTCAATGAGAAGAATTACCATCGCAACAAAA
GAAAACAACAACGTTGCCGACATTGATTTTTGGGTCTTTCTGCCAACACC
CCGTTAGTTTCCCCGGGAACGCCACGGAGAGAGAGGGGGCAAATAGCGAA
AGCACGAGAAAGGCAAGCCCCGGGACATTTTCAAGGGCTTTCGCGTTAGG
CTGCAACTCATCGGGGGGCGTTTTCAAAGTAGGGGGCATTCTCAAAGTAG
AGGGCGTTCTCAAGGGATATTGCAGAATGTTGGGGTACTTGACAGAGGGC
AGAGGGACCTTGTGCCGTGGCAGCAGGACCTGCTGCATTATCTTCAATGG
CTGAATAAATTGCGGCAAAATGGCCACACTTTCGTAGTAATTGCATTCTC
ATTCTGAGGAAGACTGTAGATCGGCGACGTTTTTCGCAAAAGCTGTGAAG
CACACACACGCAACACGTCAACGTGAGGACAGGAGCACGTGAGGTGCAGC
CCGCAGGTCGTTTTGCTGTCCTTCATAGGAATCACGTTAAAAGTGTCTGC
AGTGCGAGATGACTTGCCTTTAGCATTCTGAGCCAGGCGGCCGACGAGTT
GTGTTCGTGGACCACTAGCAATCACCAAAATGTGGGCATGGGGACAGGAA
ATGACACGAACTCCGATGAAGAAGCAAAAAACTCCCAGGGCAAGCGCGTT
GGACAATAGACTAGCGAAAAGCCCACAACAGATCAGTTGGCCCTTTACAC
AGGAAGAGCCCGCTTCACAAGTATGAAATCGAGTTACAATCGTGTCCCGT
CGGTTCTGCTCCGGGATTGGATTCGACGATGTCCTTTATGCCTATTGGAC
TAAACATTCGAGCTTTGCGTTCTCGTGGCATGTCGACTTGCTTGCTCACG
GCTTTTCCACCGAGTTGTGGCGATACTGCGGCCCCCATCTTACGCGGCGA
CGCCGTACCGTGCAGCAGGAGGTGGATCTGATGTCAGGCACCGCAAGGTT
CAGGCACTCACGGGGTGCAGAAAAGAAAGGAGAAGATAAATAAGTCCAAG
CGCCATTTTTCCCGCTTATTTCCCAGATGCCGAACCGAGCCGTTGCCGTC
ACGTCCTGATGTGGTATGGTAGGTTAAGACCGGTGAAATCCCGCAAGAAA
AAACGCCGTACATGCAGCGGGGCGGGGCCTGGGACGACTCGGACCTTGCC
AAGAAGAACGTGGTGTCGCAGTCAGGGAAGAAAATCACCAAAAAGCCGTG
GTCGAAGAAGGACAAGGAGTACGCCGAGGTGGGTGTGGCTGAGAGTGGGA
AGGGTCCACACCACAATATGCCTTTGTGATGTTGGAGAATCTCTGGGGTA
ACCTGAACGTAGTAGAAGAAACGAGATCCACACCAGCAATAGTTTTTTGG
TTTGTCTCGGATAAGTTCACTTCCATTTCGAACAACAGTCTTCGTGTCGT
ACTCGTGTTTCCTTTTGTTTGTGTTGCAATTCAGAAGCAAACATATCCAC
CAAGTACGGCCATCATAGAGCGCTCCAATCGCTTAGGTAGTAGAGAGCCT
TGTGAAAATGAAGCACAGAAGTACTGCGACGAAACGAGTCTGCATCCTTC
GGGCCAAGCGAACCTTATGGGCCAGTATGCAGCGTGTCTCTTTTGTACGT
AAGAAGGGGCCTAACTTTCTGCAACCCTACCTGTGGGTGCGGGAGGTATG
ATCAGGCATTCGCTGACCCCTGCTGCGCGCCCTACAGGAACCGTGTTATT
GTAAGCGCGCTCTTTGTTTCGTTGCACCGCCCGTGGCTGTCTTCAGGCCG
GGCACTGGTTTCCCCACATTTTAAACACCGTAGCAAGAGTGAGGGCGCCC
CTCCTCAACACCTGCACGCGCGTGAGGTTGGAAACACAAGGCCACGCTGT
TGTAGTGTTGTATGTAGGATGAAACGAGTAGATGGCTATCGAAGCAACAA
GTCCCACCCTCTTTCGTTTTCTTTCTCTCTTTCGACACACATACATGCTG
CAAGAGAGGGAGCTGAGGCAATCAAAGACACGCACTCCTAGTCGCATCCG
CGGCAGCAGCAGACAGGCGCAGCCTACTTGTTTCTAACGCTCGTCTTTTT
CTCCAACCCCTAGGTTGCGGCATTGATGAGTGTTGCGATCAGGCATCGAC
AAACATAATCCGCAGAAACAACACGCGCGCAGCCGCGCCAAGCAGGCAAA
AAAAACAAAACAAGCCCGGCAGCAGACACACTAATATCCTCGTATGGCAA
GGCTTCCTGCCGAGGCAACTCGTCTGCCCTAAACGTGCTCTACCTCTCTT
GCGCGGTGAGGTGACTGCTGCTCCGCCGCGCTGCTGCCTTCCGACGCCCA
AAGTTTTTTCCCGCAAAAGTAGCCGCCTTGTAAACTGTCAAGAATGAAAC
CTCCATTGATCATATTTTTCGTCGTACAAGTCGAACACACGACTTTTCCT
GGTCATGAAGCTCGAGCGACACGTATGTACATGAGCCGATAATGTGTTGC
TGACCCGGTGTTGAACATAGCAGGGGGAACAAAGTAGTGCAAACGCGAGC
CCACCACTGGGGCAAGAACGGTGACGCTGATCAGGTGCAAACTATGTAGC
AGCTGGTGGTTTACGGGGAACACCCTAATTTGTTGTTTCCGTGAAAAAAA
AAAATCATGACTCAAGAGTGAACCGCCTCACACGTCGCAATCAAGTCTGT
TGGAACGCTCTCTTTCCGCAACAAAAACTTCTTCTCGAGGCTCGAACGCA
GCCAGTCCGGGGGAAACCCAGACCTGGCGTGCCCCGGACGTCCTGCCCGG
TGTTGCGCCATTGCACAAGACGCAACGACTAGCATACCCCTTCTTTTGCT
GTCATCGGGTGCTCCTTCCGTGCAACACGTGCAGATAGCTGCTTCCAGTG
AAACACGTGCAGATGGCGTTGATTGCAGTTCCTAACGGTCTGTTCGGGGG
GGGGCGTCAAAAGAGTGCTGCCAACACTGGCGTACCCGGTCAGTGCCGAC
CGCCAGCACTCTTTGATGACACAGTCATCGTCGGTTGACGATGGTTGCAG
GACGTGCGGACCATGGCGTAAACATTGTCAAATGATAGAAAGCATGCAAT
ATTTTTGGCGAAATTGGCGCCATGACGTTCTCGCGAGGTGAAATTAAGCT
TTTTCAGATGAATGTGTGGTTACTTGCAACGGGTCACCAGTATCCCCCCC
CCACACCTGTCCCGATTATTTTCCTCTTGGTGCCAAACCCAGGGCGGGTA
CAAGAGAGAGCTGAGCGCGTCCCTATTCCCAGCGGACCCGATGCGTTGGA
CCCCCGGGAAGCCCTCCGGCGGCCCCGCCAACAACAAGCAGAGCATCGAG
GCACAGAAAAAGGTCGACGCGCGCCCGCACACAAAGGCGTCCGTGCCTCC
GCAGAAGAGCCGCCTGGAGGAGGGCGCGGCCACAACGAAACAGAACGATG
CCAAACTCAATAAGCAGCTCAAGTCCGACAAGAACCGTAGTGGAAAGGAT
GGCGAGGGGGGGGGCTTTGGGTTGTGGTAAGAAGGTGCTTGAAAATTCTG
GCGGTAGGTGGTGCGCTATCTAGACGTGTGTGCTGCATTTCGACCGTGGA
CCTCGCAACCTCTACAATGCCGGAACTGGAGAGGGGGGAGGAGTGGTTGC
TGTTGTTGGCCCAGTGCTCGGGCTTTACAGTGAAACGCTACTGGATCGGT
GTATCCTCCGGCCCCAAGTGTGTGTTCCGTCCCACAGCTCGCCTCGGCAA
AAACATTGAAAGACAAATCTGGCATTGCTCGACAGTACACAACAAGCGAA
CAGAGTTCACGTGCACTTTATTTAAGGGTTCTCCCAGATTTCAGCTGCAT
TTTCGGTATAAACGTGGTCTTTGGCGGGTGCCGATGCTAACTGTGTACAT
CGTACCTGCTGCCCGTGCGCCTGTCTTTGCCGCTTCACTCGGTTGTTGTG
ACGGGACACCGAATTGGGTATGCTCCATTCCGGTGCACGTGACGGGACAG
CCCGCCATATCAAGGGAAAAATGTAATTGTTGTGAAAAATCGCCGTACTT
TCGACTCAGAAAATAAATTGGCGATACAGCGACGTGCTTTTTTTTTGTTG
CGATTGCCACATGTGGTCTGCAGGCGCACTGGTGCGATGTCCTGAAGAAG
AGACCCACTTGTGTCCTTACCTCGTATATCGGCTCGTGGCTGCCGAGCGG
AGCTTAGAGCCAGGAGTGCACAAAAGTGGGCGACCGCCCTCCACTACCTG
AGAGGAACGAGTGTAGACGGAAAGGAGGTGGCCAAACTTTGTGTGCCAGT
CATCGAGGATGTCGGATTATTGTGCCGCGACTTAAATGTAGGTAGATGCG
GTACATACTATCTCGCTACATCCGCGAATCAGAGACCGCAGTAGTACAGG
AGTACTACTTGTGTTCCATGACTGCTGTAGCAGCAGTAGTAGAGTATGAA
AGGGTCTAGCGGTAACACCTTTTTATCTTCGTAGCTTATTTAGTCTTCTG
GAAGTCTTCTAAGAAGTATGCGGTTTGCGTCAAGAGTCAGCCGGCACAGC
GAACACACGAGTTAGTCTGCCGCGAGAGCTGCAGCAACGAATCCCACGGG
TGTGCGCCATACGCTCAGCTCAGCTTAGGGATTCTCGATTGTGACCGTAC
ACACACGGTCAGTCGCATGACCAGTCGCATGGCGCATAGCTCTGGTCTGT
TTTTTTGCACAAAGCTGCAGACAGAGAACGCGTGCGTCATCTCCGCAACA
AGCCTGACTTTGTATACAAGTAGATCTACAGGGTTGGAGTTGCGCACCAT
TTTTCTTTCTGTCTTGGTAGAAC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig19:1037025..1043047-

>mRNA_P-fluviatile_contig19.3490.1 ID=mRNA_P-fluviatile_contig19.3490.1|Name=mRNA_P-fluviatile_contig19.3490.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1536bp|location=Sequence derived from alignment at P-fluviatile_contig19:1037025..1043047- (Porterinema fluviatile SAG_2381)
ATGGTGGCAACAGCGCTCTCCGTCGTCGTCGCTCTTACTTTCCTTAGCCG
ACCTGCTGCGGCCTTCGTTTCCCCAGCATCCTCCGCGCTGGCGGGCGGCG
CACTGCGTCGGGTCGACAGGGGCGGGACAACGTGTGCCGCTCCGAAGAAG
TACATTCCGGACGGTGTGAGCCCAGAGGAGTGGGAGAAGATCAAGGCCAA
AGAAGAAGCGGCCAAGAAGAGGGGAAACCTCGGGCGCATCGGGGTGCAAG
GGTTCAAGAGCAGGAGCATGCAGGCATGGCAGGAGGCAGGCGCCAGCCAC
CTCTTTCCCGTGGACCCTCAGAAGATGGTGGCAACAGCGCTCTCCGTCGT
CGTCGCTCTTACTTTCCTTAGCCGACCTGCTGCGGCCTTCGTTTCCCCAG
CATCCTCCGCGCTGGCGGGCGGCGCACTGCGTCGGGTCGACAGGGGCGGG
ACAACGTGTGCCGCTCCGAAGAAGTACATTCCGGACGGTGTGAGCCCAGA
GGAGTGGGAGAAGATCAAGGCCAAAGAAGAAGCGGCCAAGAAGAGGGGAA
ACCTCGGGCGCATCGGGGTGCAAGGGTTCAAGAGCAGGAGCATGCAGGCA
TGGCAGGAGGCAGGCGCCAGCCACCTCTTTCCCGTGGACCCTCAGAAGGT
TAAGACCGGTGAAATCCCGCAAGAAAAAACGCCGTACATGCAGCGGGGCG
GGGCCTGGGACGACTCGGACCTTGCCAAGAAGAACGTGGTGTCGCAGTCA
GGGAAGAAAATCACCAAAAAGCCGTGGTCGAAGAAGGACAAGGAGTACGC
CGAGGTTAAGACCGGTGAAATCCCGCAAGAAAAAACGCCGTACATGCAGC
GGGGCGGGGCCTGGGACGACTCGGACCTTGCCAAGAAGAACGTGGTGTCG
CAGTCAGGGAAGAAAATCACCAAAAAGCCGTGGTCGAAGAAGGACAAGGA
GTACGCCGAGGGCGGGTACAAGAGAGAGCTGAGCGCGTCCCTATTCCCAG
CGGACCCGATGCGTTGGACCCCCGGGAAGCCCTCCGGCGGCCCCGCCAAC
AACAAGCAGAGCATCGAGGCACAGAAAAAGGTCGACGCGCGCCCGCACAC
AAAGGCGTCCGTGCCTCCGCAGAAGAGCCGCCTGGAGGAGGGCGCGGCCA
CAACGAAACAGAACGATGCCAAACTCAATAAGCAGCTCAAGTCCGACAAG
AACCGTAGTGGAAAGGATGGCGAGGGGGGGGGCTTTGGGTTGTGGTAAGG
CGGGTACAAGAGAGAGCTGAGCGCGTCCCTATTCCCAGCGGACCCGATGC
GTTGGACCCCCGGGAAGCCCTCCGGCGGCCCCGCCAACAACAAGCAGAGC
ATCGAGGCACAGAAAAAGGTCGACGCGCGCCCGCACACAAAGGCGTCCGT
GCCTCCGCAGAAGAGCCGCCTGGAGGAGGGCGCGGCCACAACGAAACAGA
ACGATGCCAAACTCAATAAGCAGCTCAAGTCCGACAAGAACCGTAGTGGA
AAGGATGGCGAGGGGGGGGGCTTTGGGTTGTGGTAA
back to top