mRNA_P-fluviatile_contig19.3486.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig19.3486.1
Unique NamemRNA_P-fluviatile_contig19.3486.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig19.3486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig19contigP-fluviatile_contig19:1007559..1010507 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size1040
Cds size1038
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig19.3486.1prot_P-fluviatile_contig19.3486.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig19 1007559..1010507 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815784.2101033-CDS-P-fluviatile_contig19:1007558..10079931622815784.2101033-CDS-P-fluviatile_contig19:1007558..1007993Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1007559..1007993 +
1693563301.653382-CDS-P-fluviatile_contig19:1007558..10079931693563301.653382-CDS-P-fluviatile_contig19:1007558..1007993Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1007559..1007993 +
1622815784.223478-CDS-P-fluviatile_contig19:1008476..10085661622815784.223478-CDS-P-fluviatile_contig19:1008476..1008566Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1008477..1008566 +
1693563301.6617484-CDS-P-fluviatile_contig19:1008476..10085661693563301.6617484-CDS-P-fluviatile_contig19:1008476..1008566Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1008477..1008566 +
1622815784.2379737-CDS-P-fluviatile_contig19:1008887..10089621622815784.2379737-CDS-P-fluviatile_contig19:1008887..1008962Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1008888..1008962 +
1693563301.670106-CDS-P-fluviatile_contig19:1008887..10089621693563301.670106-CDS-P-fluviatile_contig19:1008887..1008962Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1008888..1008962 +
1622815784.2516358-CDS-P-fluviatile_contig19:1009750..10101131622815784.2516358-CDS-P-fluviatile_contig19:1009750..1010113Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1009751..1010113 +
1693563301.6824498-CDS-P-fluviatile_contig19:1009750..10101131693563301.6824498-CDS-P-fluviatile_contig19:1009750..1010113Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1009751..1010113 +
1622815784.2632327-CDS-P-fluviatile_contig19:1010432..10105071622815784.2632327-CDS-P-fluviatile_contig19:1010432..1010507Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1010433..1010507 +
1693563301.6911416-CDS-P-fluviatile_contig19:1010432..10105071693563301.6911416-CDS-P-fluviatile_contig19:1010432..1010507Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 1010433..1010507 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig19.3486.1

>prot_P-fluviatile_contig19.3486.1 ID=prot_P-fluviatile_contig19.3486.1|Name=mRNA_P-fluviatile_contig19.3486.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=346bp
TFASGAGASLPPAFKGSAPAAPAPAVAAPAPARSAPPKIDGIPAAAAGSP
VEVSFGSYGDGAAAAGSDESAQAALSDLAAEAKAEANAKASAAAAAKAKA
SAEAAAKKEAEAEAAAKKEAEAAAKKEAEAAAATASKAMAKAAEETKAVA
EAVAASKKEAQDAAAAAATKAAAEEAQKQADLNKEKIEEEARAKKDAEAK
AAAAVNGGATESAESTPRAEQAKATAPATTAAAAAAGKSTAAATTASAGT
SGDEASKPNNSETPPPVAPATAAPARAPAPARKMMFPVQHAAAQAARAAA
AGGVGNRPLPTTDSFYDEPVAPKTASLRPVGSLRPGGAGASLRPGG
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mRNA from alignment at P-fluviatile_contig19:1007559..1010507+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig19.3486.1 ID=mRNA_P-fluviatile_contig19.3486.1|Name=mRNA_P-fluviatile_contig19.3486.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2949bp|location=Sequence derived from alignment at P-fluviatile_contig19:1007559..1010507+ (Porterinema fluviatile SAG_2381)
ACGTTTGCTTCCGGGGCCGGGGCGAGCTTGCCGCCGGCGTTCAAGGGCTC
AGCACCGGCGGCGCCGGCGCCGGCTGTGGCGGCGCCGGCGCCGGCCCGCA
GCGCACCGCCGAAAATCGACGGTATCCCTGCCGCTGCCGCCGGCTCTCCG
GTGGAGGTGTCGTTCGGCAGCTACGGGGACGGCGCCGCCGCCGCCGGCTC
CGATGAGAGCGCGCAGGCCGCACTATCGGACTTGGCGGCGGAGGCCAAGG
CAGAAGCAAACGCGAAAGCCTCTGCGGCGGCTGCTGCGAAGGCGAAGGCT
TCGGCGGAGGCGGCTGCAAAGAAGGAGGCAGAGGCGGAGGCGGCTGCCAA
GAAGGAGGCGGAGGCGGCTGCCAAGAAGGAGGCGGAGGCGGCCGCGGCTA
CCGCCTCCAAGGCAATGGCAAAGGCTGCCGAAGAAGTGCGTGTTACGGTC
GGCCGGTTCGCGCTTCGTTTCCAGGGTTTGCGATTTGCCGAGCATCGCAT
TTCTCTCTTCTGCGCGACGTGTGTGCCCCTTGATTTCCGGTTGGTGTTGT
GGGGGAATGACCTGCTCTTTTTTTTTTTCCATTTCTTGTATCGACTACCT
CTTTTGGCCCTAGTGTTACGACGGCATTGGGGAAGAGGCGAAACCTACGG
ATTCCTGTCCGAACTCTGCTGGTTATCCCTGAGTCTCATCGTCACCTAAT
TCGTGGTTCTTTAGCTCACCTTCGTGTAGTCCAGTCCTTTTTTCTTGATG
CATCAATGCCCCATTCCGCCCACCGCCCCCACTACATTCGTTATTCGCGT
ATTGTGATGTTCTCACGCGAACGGGCCACTCTCTCCACACCCCCTTCCTT
TTCCTTCCAAACGCGGTGCCGCTCCTGTTGCCTTTTTTTTTTCGCTCGGT
GGCTTGTGGCAAGCAAAGACAAAAGCGGTCGCGGAGGCTGTCGCTGCTTC
GAAGAAGGAGGCACAAGACGCCGCGGCCGCCGCCGCGACGAAGGCTGCCG
CGGAAGAGGTGCATTCATTTATTGGAGTGGTGAACATGTTGAGGAGTTGT
TTTGTGCTTCTCTCCCCCCCTGCAAGCTGGCCTTCGTCGCGCGCATGGCT
CATTATTGTCAAGTGGCCCTCGGCAGGCAATTCTGTCTTGGTCAGTGTCG
TGAGTCTCAGTCCCGAACAGGGTTACAAGGACCAGGGTAAGTATTGTCAG
CTGCATTCGATGGAAGTTTTGCTTCCTGCACCAGCATGTGGTTTCGTTTT
CTTCGATTGCGCCAGTACTCGTGACCCACTCCCCTCTCCCCTCTCCCCTC
CTCCCGCCGCCCACGTGAACCATGCGAAGGCGCAGAAGCAAGCCGACTTG
AACAAGGAGAAGATCGAGGAGGAGGCTCGTGCCAAGAAGGACGCTGAGGC
GAAGGTAAAGGAACGATACGCGCGAGAAAAAATACTTGAAGCTTTAAAAT
TAGTAAAAGGGGCCCCGCGTGTCATGCAGCAGTTAGGCAGCAGTCATATT
TTGTCATTTTGTGTAAGCTACTCGTTCGTATGCACGGGAGGCAGAGGCAA
GAACCTCTAGGCTCCGCGATCGCAGGATATGCAGACTGTTGGCGAGGCGG
CTCCAGCCATCGGCGGTTCTGCAGATGGCTGGGGCTTGAAATTCATAAGC
GATCGCAGTATATGCAGGCGGTCGGTGATGTGTCCCAAGCTATCGGCGGC
TCTGCAGGTGTCTGGGTCTTGAAATTTACAAGCGAGGCAATCAGTGCGGT
TATCCGCGTCTTTTTCCTCTCATCATGTTTTTGTTGAACCACGCAAGGGG
AAGTGAATCGCGTCGAGAATCACAGAGATTCCCGTGGACGTGCGGTCATC
ACCCCAGCCCCCTGGCCAACTCCCGCGAAAGAAGTCGGCTCTCTTTTGCA
ATCGGGTTGTTTCGTGGTGCCGTCGCCGCGCCAGGCAAGAAGGAGGTGAC
TGGGGGCACGCACAAACGCCGCACGAACCTGCTTTTTGGCTGATGCGGTA
CCAGCCGGTTCAACTCTCGTGTGCGAGAGAGACCCACCGACAAGTACCTT
GCACATTTTCAATCGCAGGGAGAATCACACGAACACGGACTGTAAGACCC
AAGCCACTTTCCCCGTCGTGAAATAACGCCTAAATATACGAGGCCCTCTT
CCGGGCTCCACTTCGTCCTTCCTCGTTGCTGACCTGCATCAGGCGGCGGC
GGCGGTGAATGGGGGGGCTACCGAGAGTGCCGAAAGCACCCCCCGTGCAG
AGCAAGCAAAGGCGACGGCACCAGCGACAACAGCGGCAGCGGCGGCTGCA
GGAAAATCGACGGCAGCGGCGACGACGGCAAGCGCCGGCACCTCCGGCGA
TGAAGCAAGCAAGCCCAACAATTCGGAGACGCCCCCCCCGGTCGCTCCTG
CCACTGCCGCTCCAGCTCGCGCCCCCGCCCCCGCCAGAAAGATGATGTTC
CCGGTGCAGCACGCCGCGGCGCAGGCGGCGCGGGCCGCCGCCGCGGGCGG
GGTAGGGAACAGGCCGCTGCCGACCACAGACAGCTTCTACGACGAGCCGG
TTGCGGTGAGCGGAAAGCGAGGGGGCGGGAGGGTGGGCGGGGGGGGATGT
CGAACCACGTGAAGAACAGGGAGGGCGAATAATTGAAAGAGTGTGCATGG
ATTTCGGGCGTGAAGGTAACCAGGTCGGCCGGCAGGCGGGCAGGTAGGCA
GCGCGGTCGGACGTGAGGAGCAGATTTTTCACTCATGTCTGTCTTCCGGA
CTCACGTGATCCCCTCCCCCGCACAGCCTTTCCACGTGCTCACCGTCAGC
TGTGCATGCCTTCCTGACCACCCCATCCCCCTTTTCGGGCTTGCTTCGTT
CTTCGAACACTTGTGCCCCGGCAGCCGAAGACAGCCTCGTTGCGTCCGGT
CGGTAGCCTCCGCCCCGGAGGCGCAGGAGCGAGCTTGCGCCCCGGTGGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig19:1007559..1010507+

>mRNA_P-fluviatile_contig19.3486.1 ID=mRNA_P-fluviatile_contig19.3486.1|Name=mRNA_P-fluviatile_contig19.3486.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2076bp|location=Sequence derived from alignment at P-fluviatile_contig19:1007559..1010507+ (Porterinema fluviatile SAG_2381)
ACGTTTGCTTCCGGGGCCGGGGCGAGCTTGCCGCCGGCGTTCAAGGGCTC
AGCACCGGCGGCGCCGGCGCCGGCTGTGGCGGCGCCGGCGCCGGCCCGCA
GCGCACCGCCGAAAATCGACGGTATCCCTGCCGCTGCCGCCGGCTCTCCG
GTGGAGGTGTCGTTCGGCAGCTACGGGGACGGCGCCGCCGCCGCCGGCTC
CGATGAGAGCGCGCAGGCCGCACTATCGGACTTGGCGGCGGAGGCCAAGG
CAGAAGCAAACGCGAAAGCCTCTGCGGCGGCTGCTGCGAAGGCGAAGGCT
TCGGCGGAGGCGGCTGCAAAGAAGGAGGCAGAGGCGGAGGCGGCTGCCAA
GAAGGAGGCGGAGGCGGCTGCCAAGAAGGAGGCGGAGGCGGCCGCGGCTA
CCGCCTCCAAGGCAATGGCAAAGGCTGCCGAAGAAACGTTTGCTTCCGGG
GCCGGGGCGAGCTTGCCGCCGGCGTTCAAGGGCTCAGCACCGGCGGCGCC
GGCGCCGGCTGTGGCGGCGCCGGCGCCGGCCCGCAGCGCACCGCCGAAAA
TCGACGGTATCCCTGCCGCTGCCGCCGGCTCTCCGGTGGAGGTGTCGTTC
GGCAGCTACGGGGACGGCGCCGCCGCCGCCGGCTCCGATGAGAGCGCGCA
GGCCGCACTATCGGACTTGGCGGCGGAGGCCAAGGCAGAAGCAAACGCGA
AAGCCTCTGCGGCGGCTGCTGCGAAGGCGAAGGCTTCGGCGGAGGCGGCT
GCAAAGAAGGAGGCAGAGGCGGAGGCGGCTGCCAAGAAGGAGGCGGAGGC
GGCTGCCAAGAAGGAGGCGGAGGCGGCCGCGGCTACCGCCTCCAAGGCAA
TGGCAAAGGCTGCCGAAGAAACAAAAGCGGTCGCGGAGGCTGTCGCTGCT
TCGAAGAAGGAGGCACAAGACGCCGCGGCCGCCGCCGCGACGAAGGCTGC
CGCGGAAGAGACAAAAGCGGTCGCGGAGGCTGTCGCTGCTTCGAAGAAGG
AGGCACAAGACGCCGCGGCCGCCGCCGCGACGAAGGCTGCCGCGGAAGAG
GCGCAGAAGCAAGCCGACTTGAACAAGGAGAAGATCGAGGAGGAGGCTCG
TGCCAAGAAGGACGCTGAGGCGAAGGCGCAGAAGCAAGCCGACTTGAACA
AGGAGAAGATCGAGGAGGAGGCTCGTGCCAAGAAGGACGCTGAGGCGAAG
GCGGCGGCGGCGGTGAATGGGGGGGCTACCGAGAGTGCCGAAAGCACCCC
CCGTGCAGAGCAAGCAAAGGCGACGGCACCAGCGACAACAGCGGCAGCGG
CGGCTGCAGGAAAATCGACGGCAGCGGCGACGACGGCAAGCGCCGGCACC
TCCGGCGATGAAGCAAGCAAGCCCAACAATTCGGAGACGCCCCCCCCGGT
CGCTCCTGCCACTGCCGCTCCAGCTCGCGCCCCCGCCCCCGCCAGAAAGA
TGATGTTCCCGGTGCAGCACGCCGCGGCGCAGGCGGCGCGGGCCGCCGCC
GCGGGCGGGGTAGGGAACAGGCCGCTGCCGACCACAGACAGCTTCTACGA
CGAGCCGGTTGCGGCGGCGGCGGCGGTGAATGGGGGGGCTACCGAGAGTG
CCGAAAGCACCCCCCGTGCAGAGCAAGCAAAGGCGACGGCACCAGCGACA
ACAGCGGCAGCGGCGGCTGCAGGAAAATCGACGGCAGCGGCGACGACGGC
AAGCGCCGGCACCTCCGGCGATGAAGCAAGCAAGCCCAACAATTCGGAGA
CGCCCCCCCCGGTCGCTCCTGCCACTGCCGCTCCAGCTCGCGCCCCCGCC
CCCGCCAGAAAGATGATGTTCCCGGTGCAGCACGCCGCGGCGCAGGCGGC
GCGGGCCGCCGCCGCGGGCGGGGTAGGGAACAGGCCGCTGCCGACCACAG
ACAGCTTCTACGACGAGCCGGTTGCGCCGAAGACAGCCTCGTTGCGTCCG
GTCGGTAGCCTCCGCCCCGGAGGCGCAGGAGCGAGCTTGCGCCCCGGTGG
ACCGAAGACAGCCTCGTTGCGTCCGGTCGGTAGCCTCCGCCCCGGAGGCG
CAGGAGCGAGCTTGCGCCCCGGTGGA
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