mRNA_P-fluviatile_contig19.3475.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig19.3475.1
Unique NamemRNA_P-fluviatile_contig19.3475.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig19.3475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig19contigP-fluviatile_contig19:851003..851758 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size756
Cds size756
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815785.7999818-CDS-P-fluviatile_contig19:851002..8517581622815785.7999818-CDS-P-fluviatile_contig19:851002..851758Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 851003..851758 +
1693563304.8362823-CDS-P-fluviatile_contig19:851002..8517581693563304.8362823-CDS-P-fluviatile_contig19:851002..851758Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 851003..851758 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig19.3475.1prot_P-fluviatile_contig19.3475.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig19 851003..851758 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig19.3475.1

>prot_P-fluviatile_contig19.3475.1 ID=prot_P-fluviatile_contig19.3475.1|Name=mRNA_P-fluviatile_contig19.3475.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=252bp
QQQQEQQHEQPQPQQGQPGVGRVGSVAPGGENAGTDGGGSGGGGINLGSL
ARTSATLPAQQQPSLRHPYQREQLERHWQLTKQQRHWKQQQQQQEQQRQQ
RQQQHQPAAAGSPATSATAISIDSAPSSSSSSPVSLQPTRRAPSAASFTT
CGTERPTLNLASPGGGSGGGSDVDLKSPGALATAAAAGAGAAADAGHVGG
AAHEPERRGEKASLAGPKRKRRRQQRRQLSPSGSATTAKGIIDRGGGSRG
ER
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mRNA from alignment at P-fluviatile_contig19:851003..851758+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig19.3475.1 ID=mRNA_P-fluviatile_contig19.3475.1|Name=mRNA_P-fluviatile_contig19.3475.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=756bp|location=Sequence derived from alignment at P-fluviatile_contig19:851003..851758+ (Porterinema fluviatile SAG_2381)
CAACAACAACAAGAGCAGCAACACGAGCAGCCCCAGCCCCAGCAGGGCCA
GCCGGGTGTAGGGCGCGTCGGCTCGGTCGCACCCGGCGGCGAGAACGCCG
GGACCGATGGCGGCGGCAGCGGCGGCGGCGGTATTAACCTCGGCAGCTTG
GCGAGGACAAGCGCCACACTCCCCGCCCAGCAGCAACCCTCGCTGCGGCA
CCCGTACCAAAGGGAGCAGCTCGAACGACACTGGCAGCTGACGAAGCAGC
AGCGGCACTGGAAGCAGCAGCAGCAGCAGCAGGAGCAGCAGCGGCAGCAG
CGGCAGCAGCAACATCAGCCGGCAGCCGCCGGAAGCCCTGCTACCTCCGC
TACAGCCATTTCCATCGACTCGGCCCCCTCTTCGTCCTCGTCCTCCCCGG
TCTCCCTGCAACCGACTCGGCGCGCGCCGTCCGCCGCCTCGTTCACTACC
TGCGGTACCGAGCGCCCCACCCTAAACCTCGCTTCCCCCGGCGGCGGCAG
CGGCGGCGGTTCAGATGTTGATCTCAAAAGCCCAGGAGCATTAGCGACAG
CGGCAGCAGCAGGTGCAGGCGCGGCCGCAGATGCAGGTCATGTTGGGGGC
GCCGCGCACGAGCCAGAGAGAAGGGGGGAGAAGGCAAGCCTTGCGGGACC
CAAGCGGAAACGACGCAGGCAGCAACGGCGGCAATTGTCCCCATCCGGAT
CAGCGACAACAGCGAAAGGGATTATCGACCGCGGCGGCGGCAGCCGCGGC
GAAAGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig19:851003..851758+

>mRNA_P-fluviatile_contig19.3475.1 ID=mRNA_P-fluviatile_contig19.3475.1|Name=mRNA_P-fluviatile_contig19.3475.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1512bp|location=Sequence derived from alignment at P-fluviatile_contig19:851003..851758+ (Porterinema fluviatile SAG_2381)
CAACAACAACAAGAGCAGCAACACGAGCAGCCCCAGCCCCAGCAGGGCCA
GCCGGGTGTAGGGCGCGTCGGCTCGGTCGCACCCGGCGGCGAGAACGCCG
GGACCGATGGCGGCGGCAGCGGCGGCGGCGGTATTAACCTCGGCAGCTTG
GCGAGGACAAGCGCCACACTCCCCGCCCAGCAGCAACCCTCGCTGCGGCA
CCCGTACCAAAGGGAGCAGCTCGAACGACACTGGCAGCTGACGAAGCAGC
AGCGGCACTGGAAGCAGCAGCAGCAGCAGCAGGAGCAGCAGCGGCAGCAG
CGGCAGCAGCAACATCAGCCGGCAGCCGCCGGAAGCCCTGCTACCTCCGC
TACAGCCATTTCCATCGACTCGGCCCCCTCTTCGTCCTCGTCCTCCCCGG
TCTCCCTGCAACCGACTCGGCGCGCGCCGTCCGCCGCCTCGTTCACTACC
TGCGGTACCGAGCGCCCCACCCTAAACCTCGCTTCCCCCGGCGGCGGCAG
CGGCGGCGGTTCAGATGTTGATCTCAAAAGCCCAGGAGCATTAGCGACAG
CGGCAGCAGCAGGTGCAGGCGCGGCCGCAGATGCAGGTCATGTTGGGGGC
GCCGCGCACGAGCCAGAGAGAAGGGGGGAGAAGGCAAGCCTTGCGGGACC
CAAGCGGAAACGACGCAGGCAGCAACGGCGGCAATTGTCCCCATCCGGAT
CAGCGACAACAGCGAAAGGGATTATCGACCGCGGCGGCGGCAGCCGCGGC
GAAAGACAACAACAACAAGAGCAGCAACACGAGCAGCCCCAGCCCCAGCA
GGGCCAGCCGGGTGTAGGGCGCGTCGGCTCGGTCGCACCCGGCGGCGAGA
ACGCCGGGACCGATGGCGGCGGCAGCGGCGGCGGCGGTATTAACCTCGGC
AGCTTGGCGAGGACAAGCGCCACACTCCCCGCCCAGCAGCAACCCTCGCT
GCGGCACCCGTACCAAAGGGAGCAGCTCGAACGACACTGGCAGCTGACGA
AGCAGCAGCGGCACTGGAAGCAGCAGCAGCAGCAGCAGGAGCAGCAGCGG
CAGCAGCGGCAGCAGCAACATCAGCCGGCAGCCGCCGGAAGCCCTGCTAC
CTCCGCTACAGCCATTTCCATCGACTCGGCCCCCTCTTCGTCCTCGTCCT
CCCCGGTCTCCCTGCAACCGACTCGGCGCGCGCCGTCCGCCGCCTCGTTC
ACTACCTGCGGTACCGAGCGCCCCACCCTAAACCTCGCTTCCCCCGGCGG
CGGCAGCGGCGGCGGTTCAGATGTTGATCTCAAAAGCCCAGGAGCATTAG
CGACAGCGGCAGCAGCAGGTGCAGGCGCGGCCGCAGATGCAGGTCATGTT
GGGGGCGCCGCGCACGAGCCAGAGAGAAGGGGGGAGAAGGCAAGCCTTGC
GGGACCCAAGCGGAAACGACGCAGGCAGCAACGGCGGCAATTGTCCCCAT
CCGGATCAGCGACAACAGCGAAAGGGATTATCGACCGCGGCGGCGGCAGC
CGCGGCGAAAGA
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