mRNA_P-fluviatile_contig19.3471.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig19.3471.1
Unique NamemRNA_P-fluviatile_contig19.3471.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig19.3471.1 vs. uniprot
Match: A0A6H5KJA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA7_9PHAE)

HSP 1 Score: 347 bits (890), Expect = 5.010e-119
Identity = 168/204 (82.35%), Postives = 180/204 (88.24%), Query Frame = 1 
Query:    4 YKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAQYIRQAYTTKFMVDQLKYTSLVNARRSGSSILRSVNLAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEEYQHRVMQRWDGEILGGDASFKFAKIIRLGAKASEERTRPVYG 615
            YKCAKC E NKGK  AEK  TSFNAWDAGCLRRLP+Y+SKEFPFLLTKRSGIEI M+DRLAD LVHGKGFSA  + IRQA+TTKFMVDQLKYTSLVN RR+ S I RS NLA TPE+FGSFDDSTK+  AV +EH+LRDVW  YFSKLPVLEVD VDWTLEEYQHR+MQRWDG+ILGGDASFKFAKIIRLGAKA EERTRPVYG
Sbjct:   12 YKCAKCAEFNKGKQRAEKCKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMLDRLADGLVHGKGFSAGTKNIRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKTPERFGSFDDSTKHGGAVPSEHYLRDVWRLYFSKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYG 215
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BLAST of mRNA_P-fluviatile_contig19.3471.1 vs. uniprot
Match: A0A6H5KDX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX0_9PHAE)

HSP 1 Score: 352 bits (904), Expect = 9.120e-119
Identity = 171/205 (83.41%), Postives = 183/205 (89.27%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAQYIRQAYTTKFMVDQLKYTSLVNARRSGSSILRSVNLAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEEYQHRVMQRWDGEILGGDASFKFAKIIRLGAKASEERTRPVYG 615
            RYKCAKC E NKGK EAEK  TSFNAWDAGCLRRLP+Y+SKEFPFLLTKRSGIEI MV+RLADDLVHGK FSA+A+ IRQA+TTKFMVDQLKYTSLVN RR+ S I RS NLA TPE+FGSFDDSTKY  AV +EH+LRDVW  YF KLPVLEVD VDWTLEEYQHR+MQRWDG+ILGGDASFKFAKIIRLGAKA EERTRPVYG
Sbjct:  118 RYKCAKCAEFNKGKQEAEKHKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVNRLADDLVHGKDFSAAAKNIRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLANTPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFPKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYG 322
[Close]
BLAST of mRNA_P-fluviatile_contig19.3471.1 vs. uniprot
Match: A0A6H5L7G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G9_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 7.820e-118
Identity = 171/205 (83.41%), Postives = 183/205 (89.27%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAQYIRQAYTTKFMVDQLKYTSLVNARRSGSSILRSVNLAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEEYQHRVMQRWDGEILGGDASFKFAKIIRLGAKASEERTRPVYG 615
            RYKCAKC E NKGK EAEKR TSFNAWDAGCLRRLP+Y+SKEFPFLLTKRSGIEI MVDRLADDLVHGKGFSA+A+ IRQA+TTKFMVDQLKYTSLVN RR+ S I RS NLA TPE+FGSFDDSTKY  AV +EH+LRDV   YFSKLPVLEVD VDWTLEEY HR+MQRWDG+ILGGD+SFKFAKIIRL AKA EERTRPVYG
Sbjct:  152 RYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNIRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVRRFYFSKLPVLEVDSVDWTLEEYHHRLMQRWDGDILGGDSSFKFAKIIRLRAKAGEERTRPVYG 356
[Close]
BLAST of mRNA_P-fluviatile_contig19.3471.1 vs. uniprot
Match: A0A6H5JPP4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP4_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 6.620e-117
Identity = 169/205 (82.44%), Postives = 182/205 (88.78%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAQYIRQAYTTKFMVDQLKYTSLVNARRSGSSILRSVNLAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEEYQHRVMQRWDGEILGGDASFKFAKIIRLGAKASEERTRPVYG 615
            RYKCAKC E NKGK EAEKR TSFNAW AGCLRRLP+Y+SKEFPFLLTKRSGIEI MVDRLADDLVHGKGFSA+A+ I QA+TTKFMVDQLKYTSLV+ RR+ S I RS NLA  PE+FGSFDDSTKY  AV +EH+LRDVW  YFSKLPVLE+D VDWTLEEYQHR+MQRWDG+ILGGDA FKFAKIIRLGAKA EERTRPVYG
Sbjct:  152 RYKCAKCAEFNKGKQEAEKRKTSFNAWGAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNICQAHTTKFMVDQLKYTSLVSTRRTSSGIFRSANLAKIPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFSKLPVLEMDSVDWTLEEYQHRLMQRWDGDILGGDALFKFAKIIRLGAKAGEERTRPVYG 356
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BLAST of mRNA_P-fluviatile_contig19.3471.1 vs. uniprot
Match: A0A6H5K4A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A9_9PHAE)

HSP 1 Score: 337 bits (865), Expect = 1.180e-114
Identity = 168/205 (81.95%), Postives = 180/205 (87.80%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAQYIRQAYTTKFMVDQLKYTSLVNARRSGSSILRSVNLAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEEYQHRVMQRWDGEILGGDASFKFAKIIRLGAKASEERTRPVYG 615
            R KCAK  E NKGK EAEKR TSFNAWDAGCLRRLP+Y+SKEFPFLLT+RSGIEI MV RLADDLV GKGFSA+A+ I QA+TTKFMVDQLKYTSLVN RR+ S I RS NLA TPE+FGSFDDSTKY  AV +EH+LRDV   YFSKLPVLEVD VDWTLEEYQHR+MQRWDG+ILGGDASFKFAKIIRLGAKA EERTRPVYG
Sbjct:   12 RCKCAKRAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTERSGIEICMVGRLADDLVRGKGFSAAAKNILQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVRRFYFSKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYG 216
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BLAST of mRNA_P-fluviatile_contig19.3471.1 vs. uniprot
Match: A0A6H5KTU1_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTU1_9PHAE)

HSP 1 Score: 348 bits (894), Expect = 3.560e-114
Identity = 170/205 (82.93%), Postives = 183/205 (89.27%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAQYIRQAYTTKFMVDQLKYTSLVNARRSGSSILRSVNLAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEEYQHRVMQRWDGEILGGDASFKFAKIIRLGAKASEERTRPVYG 615
            RYKCAKC E NKGK EAEKR TSFNAWDAGCLRRLP+Y+SKEFPFLLTKRSGIEI MVDRLADDLVHGKGFSA+A+ IRQA+TTKFMVDQLKYTSLV+ RR+ S I RS NLA  PE+FGSFDDSTKY  AV +EH+LRDV   YFSKLPVLEVD VDWTLEEY HR+MQRWDG+ILGGD+SFKFAKIIRLGAKA EERTRPVYG
Sbjct:   12 RYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNIRQAHTTKFMVDQLKYTSLVSTRRTSSGIFRSANLAKIPERFGSFDDSTKYGGAVPSEHYLRDVRRLYFSKLPVLEVDSVDWTLEEYHHRLMQRWDGDILGGDSSFKFAKIIRLGAKAGEERTRPVYG 216
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BLAST of mRNA_P-fluviatile_contig19.3471.1 vs. uniprot
Match: A0A6H5KT01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT01_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 5.780e-114
Identity = 166/205 (80.98%), Postives = 178/205 (86.83%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAQYIRQAYTTKFMVDQLKYTSLVNARRSGSSILRSVNLAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEEYQHRVMQRWDGEILGGDASFKFAKIIRLGAKASEERTRPVYG 615
            RYKCAK  E NKGK EAE R T  NAWDAGCLRRLP+Y+SKEFPFLLTKRSGIEI MVDRLADDLVHGKGFSA+A+ IRQA+TTKFMVDQLKYTSLVN RR+ S I RS NLA TPE+FGSFDDSTKY  AV +EH+LR V   YFSKLPVLEVD VDWTLEEY HR+MQRWDG+ILGGD+SFKFAKIIRL AKA EERTRPVYG
Sbjct:   31 RYKCAKGAEFNKGKQEAETRKTRVNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNIRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKTPERFGSFDDSTKYGGAVPSEHYLRHVRRFYFSKLPVLEVDSVDWTLEEYHHRLMQRWDGDILGGDSSFKFAKIIRLRAKAGEERTRPVYG 235
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BLAST of mRNA_P-fluviatile_contig19.3471.1 vs. uniprot
Match: A0A6H5JQG2_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 1.730e-101
Identity = 164/231 (71.00%), Postives = 182/231 (78.79%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAQYIRQA--------------------------YTTKFMVDQLKYTSLVNARRSGSSILRSVNLAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEEYQHRVMQRWDGEILGGDASFKFAKIIRLGAKASEERTRPVYG 615
            RYKCAKC + N+GK EAEKR TSFNAWDAGCL+RLP+Y+SKEFP LLTKRSGIEIRMVDRLADDLVHGKGFSA+A+ I Q                            TTKFMVDQLKYTSLVN+RR+ S I RS N A TPE+FGSFDDSTKY  AV +EH+LRDVW  Y+SKLPVLEVDGV WTLEEYQHR+MQRWDGE+L GDASFKFAKIIRLGA+A EER++PVYG
Sbjct:  152 RYKCAKCAKFNQGKEEAEKRKTSFNAWDAGCLQRLPEYISKEFPSLLTKRSGIEIRMVDRLADDLVHGKGFSAAAKNICQVNVHFLICSVLKITXXXXXXXXXXXXXXTTKFMVDQLKYTSLVNSRRTSSGIFRSANHAKTPERFGSFDDSTKYGGAVPSEHYLRDVWWLYYSKLPVLEVDGVGWTLEEYQHRLMQRWDGEVLSGDASFKFAKIIRLGARAGEERSKPVYG 382
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BLAST of mRNA_P-fluviatile_contig19.3471.1 vs. uniprot
Match: A0A6H5L553_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L553_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 1.750e-97
Identity = 146/206 (70.87%), Postives = 165/206 (80.10%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEF-PFLLTKRSGIEIRMVDRLADDLVHGKGFSASAQYIRQAYTTKFMVDQLKYTSLVNARRSGSSILRSVNLAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEEYQHRVMQRWDGEILGGDASFKFAKIIRLGAKASEERTRPVYG 615
            RYKC +CVE N    E+E+R TSFNAWD GCL RLPDYVSKEF PF+LT RSGI+IR+VDRLADDL HGKGFSA+A+YIRQA+TTKFMV QLKY SL +ARRS    L     A  PEKFGSFDD+ KYC AV ++H+LRDVW  YFS+LPVLEV+GV WT E+Y  RV QRWDG +L GDASFKFAKIIRLGA A  ERTRPV+G
Sbjct:   12 RYKCERCVEYNGTVEESEQRPTSFNAWDVGCLDRLPDYVSKEFFPFILTHRSGIDIRLVDRLADDLAHGKGFSAAAKYIRQAHTTKFMVYQLKYVSLNDARRSSRVSL--FGAAPVPEKFGSFDDTEKYCGAVPSDHYLRDVWRTYFSELPVLEVEGVKWTWEDYLPRVHQRWDGTVLAGDASFKFAKIIRLGATAHGERTRPVHG 215
[Close]
BLAST of mRNA_P-fluviatile_contig19.3471.1 vs. uniprot
Match: A0A6H5KE68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE68_9PHAE)

HSP 1 Score: 288 bits (738), Expect = 2.590e-96
Identity = 143/205 (69.76%), Postives = 161/205 (78.54%), Query Frame = 1 
Query:    1 RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEIRMVDRLADDLVHGKGFSASAQYIRQAYTTKFMVDQLKYTSLVNARRSGSSILRSVNLAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLPVLEVDGVDWTLEEYQHRVMQRWDGEILGGDASFKFAKIIRLGAKASEERTRPVYG 615
            R  C +CVE N    E+E+R TSFNAWD GCL RLPDYVSKEFPF+LT RSGI+IR+VDRLADDLVHGKGFSA+A+YIRQA+TTKFM  QLKY SL +ARRS    L     A  P KFGSFDD+ KYC AV ++H+LRDVW  YFS+LPVLEV GV WT E+Y H V QRWDG +L GDASFKFAKIIRLGA A  ERTRPV+G
Sbjct:   20 RIPCERCVEYNGTVEESEQRPTSFNAWDVGCLDRLPDYVSKEFPFILTHRSGIDIRLVDRLADDLVHGKGFSAAAKYIRQAHTTKFMAFQLKYVSLADARRSSRVSL--FGAAPVPVKFGSFDDTEKYCGAVPSDHYLRDVWRTYFSELPVLEVKGVKWTREDYLHCVHQRWDGTVLAGDASFKFAKIIRLGATAHGERTRPVHG 222
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig19.3471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJA7_9PHAE5.010e-11982.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDX0_9PHAE9.120e-11983.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7G9_9PHAE7.820e-11883.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPP4_9PHAE6.620e-11782.44Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4A9_9PHAE1.180e-11481.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTU1_9PHAE3.560e-11482.933'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KT01_9PHAE5.780e-11480.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQG2_9PHAE1.730e-10171.003'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5L553_9PHAE1.750e-9770.87Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE68_9PHAE2.590e-9669.76Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig19contigP-fluviatile_contig19:819742..820519 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score179.9
Seed ortholog evalue1.2e-42
Seed eggNOG ortholog2880.D7FIV2
Preferred nameWRN
KEGG koko:K10900,ko:K20777
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsKOG4373@1,KOG4373@2759
EC3.1.11.1,3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Exons2
Model size616
Cds size615
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815795.3194113-CDS-P-fluviatile_contig19:819742..8201171622815795.3194113-CDS-P-fluviatile_contig19:819742..820117Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 819743..820117 -
1693563326.8072383-CDS-P-fluviatile_contig19:819742..8201171693563326.8072383-CDS-P-fluviatile_contig19:819742..820117Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 819743..820117 -
1622815795.3315065-CDS-P-fluviatile_contig19:820279..8205191622815795.3315065-CDS-P-fluviatile_contig19:820279..820519Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 820280..820519 -
1693563326.818091-CDS-P-fluviatile_contig19:820279..8205191693563326.818091-CDS-P-fluviatile_contig19:820279..820519Porterinema fluviatile SAG_2381CDSP-fluviatile_contig19 820280..820519 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig19.3471.1prot_P-fluviatile_contig19.3471.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig19 819743..820519 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig19.3471.1

>prot_P-fluviatile_contig19.3471.1 ID=prot_P-fluviatile_contig19.3471.1|Name=mRNA_P-fluviatile_contig19.3471.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=205bp
RYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKR
SGIEIRMVDRLADDLVHGKGFSASAQYIRQAYTTKFMVDQLKYTSLVNAR
RSGSSILRSVNLAATPEKFGSFDDSTKYCVAVLTEHFLRDVWHAYFSKLP
VLEVDGVDWTLEEYQHRVMQRWDGEILGGDASFKFAKIIRLGAKASEERT
RPVYG
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mRNA from alignment at P-fluviatile_contig19:819742..820519-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig19.3471.1 ID=mRNA_P-fluviatile_contig19.3471.1|Name=mRNA_P-fluviatile_contig19.3471.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=778bp|location=Sequence derived from alignment at P-fluviatile_contig19:819742..820519- (Porterinema fluviatile SAG_2381)
AGGTACAAGTGTGCGAAGTGCGTGGAGTGCAACAAAGGCAAGACGGAGGC
GGAGAAGCGCGCGACGAGCTTCAATGCGTGGGACGCTGGGTGCCTCCGAC
GTCTTCCGGACTACGTCTCGAAGGAATTCCCTTTCCTTCTCACGAAGCGA
TCGGGCATTGAGATTCGCATGGTGGACCGGCTTGCAGATGATTTGGTGCA
TGGGAAGGGCTTCTCCGCTTCTGCGCAGTATATTCGCCAGGTGAATTTGC
AGCGTCTCAGAGGACGGGCTGGTCTTTGCTTTTCTCTCCTGTTCACAACG
TTTTCTGATGGTACCGCAAGCTCTACCGTAGGAAATGTCGGACCTCATAA
GCGCCGACCCGTGCTACAACGAAAACGTGTCGTCCTCATAATGCTGTTGC
AGGCGTACACGACCAAGTTCATGGTGGACCAGCTCAAGTACACCTCGCTG
GTCAACGCCCGGCGGTCCGGCTCATCAATCTTGCGCTCGGTCAACCTAGC
CGCAACCCCAGAGAAGTTCGGCAGCTTCGATGACTCGACGAAGTACTGCG
TTGCGGTCCTGACGGAGCACTTTTTGCGGGACGTGTGGCACGCGTATTTC
TCTAAACTCCCCGTGCTGGAGGTGGATGGCGTGGATTGGACGCTGGAGGA
GTATCAGCACCGCGTGATGCAGCGCTGGGACGGAGAGATTCTGGGTGGGG
ATGCTTCGTTCAAGTTTGCGAAGATCATCCGGCTCGGGGCAAAAGCGAGC
GAGGAGCGCACAAGACCAGTGTACGGCA
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Coding sequence (CDS) from alignment at P-fluviatile_contig19:819742..820519-

>mRNA_P-fluviatile_contig19.3471.1 ID=mRNA_P-fluviatile_contig19.3471.1|Name=mRNA_P-fluviatile_contig19.3471.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1230bp|location=Sequence derived from alignment at P-fluviatile_contig19:819742..820519- (Porterinema fluviatile SAG_2381)
AGGTACAAGTGTGCGAAGTGCGTGGAGTGCAACAAAGGCAAGACGGAGGC
GGAGAAGCGCGCGACGAGCTTCAATGCGTGGGACGCTGGGTGCCTCCGAC
GTCTTCCGGACTACGTCTCGAAGGAATTCCCTTTCCTTCTCACGAAGCGA
TCGGGCATTGAGATTCGCATGGTGGACCGGCTTGCAGATGATTTGGTGCA
TGGGAAGGGCTTCTCCGCTTCTGCGCAGTATATTCGCCAGAGGTACAAGT
GTGCGAAGTGCGTGGAGTGCAACAAAGGCAAGACGGAGGCGGAGAAGCGC
GCGACGAGCTTCAATGCGTGGGACGCTGGGTGCCTCCGACGTCTTCCGGA
CTACGTCTCGAAGGAATTCCCTTTCCTTCTCACGAAGCGATCGGGCATTG
AGATTCGCATGGTGGACCGGCTTGCAGATGATTTGGTGCATGGGAAGGGC
TTCTCCGCTTCTGCGCAGTATATTCGCCAGGCGTACACGACCAAGTTCAT
GGTGGACCAGCTCAAGTACACCTCGCTGGTCAACGCCCGGCGGTCCGGCT
CATCAATCTTGCGCTCGGTCAACCTAGCCGCAACCCCAGAGAAGTTCGGC
AGCTTCGATGACTCGACGAAGTACTGCGTTGCGGTCCTGACGGAGCACTT
TTTGCGGGACGTGTGGCACGCGTATTTCTCTAAACTCCCCGTGCTGGAGG
TGGATGGCGTGGATTGGACGCTGGAGGAGTATCAGCACCGCGTGATGCAG
CGCTGGGACGGAGAGATTCTGGGTGGGGATGCTTCGTTCAAGTTTGCGAA
GATCATCCGGCTCGGGGCAAAAGCGAGCGAGGAGCGCACAAGACCAGTGT
ACGGCGCGTACACGACCAAGTTCATGGTGGACCAGCTCAAGTACACCTCG
CTGGTCAACGCCCGGCGGTCCGGCTCATCAATCTTGCGCTCGGTCAACCT
AGCCGCAACCCCAGAGAAGTTCGGCAGCTTCGATGACTCGACGAAGTACT
GCGTTGCGGTCCTGACGGAGCACTTTTTGCGGGACGTGTGGCACGCGTAT
TTCTCTAAACTCCCCGTGCTGGAGGTGGATGGCGTGGATTGGACGCTGGA
GGAGTATCAGCACCGCGTGATGCAGCGCTGGGACGGAGAGATTCTGGGTG
GGGATGCTTCGTTCAAGTTTGCGAAGATCATCCGGCTCGGGGCAAAAGCG
AGCGAGGAGCGCACAAGACCAGTGTACGGC
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